Psyllid ID: psy17679
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 303 | 2.2.26 [Sep-21-2011] | |||||||
| A1ZAI5 | 625 | Putative fatty acyl-CoA r | no | N/A | 0.841 | 0.408 | 0.384 | 1e-56 | |
| Q922J9 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.821 | 0.483 | 0.388 | 4e-56 | |
| Q66H50 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.821 | 0.483 | 0.388 | 8e-56 | |
| Q5R834 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.821 | 0.483 | 0.385 | 3e-55 | |
| Q8WVX9 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.821 | 0.483 | 0.385 | 4e-55 | |
| Q7ZXF5 | 515 | Fatty acyl-CoA reductase | N/A | N/A | 0.821 | 0.483 | 0.378 | 7e-53 | |
| Q5ZM72 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.821 | 0.483 | 0.375 | 2e-52 | |
| Q7TNT2 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.808 | 0.475 | 0.355 | 3e-49 | |
| Q0P5J1 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.808 | 0.475 | 0.345 | 2e-48 | |
| Q96K12 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.808 | 0.475 | 0.341 | 2e-46 |
| >sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 219 bits (559), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 170/294 (57%), Gaps = 39/294 (13%)
Query: 31 DDEIGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL 90
DD P+ +FY +++F+TGGTGFMGK +VEKLLRSCP +++IYLL+RPK+G+++ RL
Sbjct: 112 DDTSYVPIAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARL 171
Query: 91 DAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVR 150
+ LF LR E P SKV ++GD + LG+SE D+ L + V++VFH AATV+
Sbjct: 172 TELLNAPLFESLRQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVK 231
Query: 151 FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYEN 210
FDE +K++V IN+ G + +++L M L A +HVSTA+ +C R + E Y P ++
Sbjct: 232 FDEKLKLSVTINMLGTKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDD 291
Query: 211 LIQLISETGDEELSEMTPNRV---------------HI----SG---------------- 235
+I LI+ ++ L ++TP + H+ +G
Sbjct: 292 IISLINWLPEDILDQLTPRLIGKRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSIVTASL 351
Query: 236 ----TGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAW 285
GW+DN GP G++ +A G+ T + N V DMVPVD+V+N MI+ AW
Sbjct: 352 NEPFAGWVDNFNGPTGLVSALAKGMFRTMMCEKNYVADMVPVDIVINLMIAAAW 405
|
Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols. Drosophila melanogaster (taxid: 7227) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: nEC: 2 |
| >sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 218 bits (555), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 166/288 (57%), Gaps = 39/288 (13%)
Query: 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLF 99
E+Y K I LTG TGF+GK ++EKLLRSCP + +Y+LVR K G+ QER++ I +LF
Sbjct: 6 EYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSKLF 65
Query: 100 WRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAV 159
RLR E PDFR K+ A+ + + P L LSE D+ ++ N++FH AATVRF+E+++ AV
Sbjct: 66 DRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAV 125
Query: 160 KINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETG 219
++NV + ++ LA++MK+L+ F+HVSTA+ +C R+ IDE YP P+ + LI +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMD 185
Query: 220 DEELSEMTPN--------------------------------RVHISGT-------GWID 240
D ++++TP R I G GWID
Sbjct: 186 DGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWID 245
Query: 241 NVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288
N GP G+ + G+L T + N + D+VPVD+VVN+ ++ AW G
Sbjct: 246 NFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAWYSG 293
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 217 bits (553), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 166/288 (57%), Gaps = 39/288 (13%)
Query: 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLF 99
E+Y K I LTG TGF+GK ++EKLLRSCP + +Y+LVR K G+ QER++ I +LF
Sbjct: 6 EYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGKLF 65
Query: 100 WRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAV 159
RLR E PDFR K+ A+ + + P L LSE D+ ++ N++FH AATVRF+E+++ AV
Sbjct: 66 DRLRDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAV 125
Query: 160 KINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETG 219
++NV + ++ LA++MK+L+ F+HVSTA+ +C R+ IDE YP P+ + LI +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMD 185
Query: 220 DEELSEMTPN--------------------------------RVHISGT-------GWID 240
D ++++TP R I G GWID
Sbjct: 186 DGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWID 245
Query: 241 NVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288
N GP G+ + G+L T + N + D+VPVD+VVN+ ++ AW G
Sbjct: 246 NFNGPSGLFIAAGKGILRTMRASNNALADLVPVDVVVNTSLAAAWYSG 293
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 215 bits (548), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 166/288 (57%), Gaps = 39/288 (13%)
Query: 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLF 99
E+Y K + LTG TGF+GK ++EKLLRSCP + +Y+LVR K G+ QER++ + +LF
Sbjct: 6 EYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLF 65
Query: 100 WRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAV 159
RLR E PDFR K+ A+ + + P L LSE D+ +++ NI+FH AATVRF+E+++ AV
Sbjct: 66 DRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIESTNIIFHCAATVRFNENLRDAV 125
Query: 160 KINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETG 219
++NV + ++ LA++MK+L+ F+HVSTA+ +C R+ IDE YP P+ + LI +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMD 185
Query: 220 DEELSEMTPN--------------------------------RVHISGT-------GWID 240
D ++++TP R I G GWID
Sbjct: 186 DGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWID 245
Query: 241 NVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288
N GP G+ + G+L T + N + D+VPVD+VVN ++ AW G
Sbjct: 246 NFNGPSGLFIAAGKGILRTIRASNNALADLVPVDVVVNMSLAAAWYSG 293
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 215 bits (547), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 165/288 (57%), Gaps = 39/288 (13%)
Query: 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLF 99
E+Y K + LTG TGF+GK ++EKLLRSCP + +Y+LVR K G+ QER++ + +LF
Sbjct: 6 EYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLF 65
Query: 100 WRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAV 159
RLR E PDFR K+ A+ + + P L LSE D+ ++ NI+FH AATVRF+E+++ AV
Sbjct: 66 DRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAV 125
Query: 160 KINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETG 219
++NV + ++ LA++MK+L+ F+HVSTA+ +C R+ IDE YP P+ + LI +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMD 185
Query: 220 DEELSEMTPN--------------------------------RVHISGT-------GWID 240
D ++++TP R I G GWID
Sbjct: 186 DGLVNDITPKLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWID 245
Query: 241 NVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288
N GP G+ + G+L T + N + D+VPVD+VVN ++ AW G
Sbjct: 246 NFNGPSGLFIAAGKGILRTIRASNNALADLVPVDVVVNMSLAAAWYSG 293
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 207 bits (527), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 168/288 (58%), Gaps = 39/288 (13%)
Query: 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLF 99
EFY+ K + +TG TGFMGK ++EKLLRSCP+ K +Y+LVR K G+ +ER+ + +LF
Sbjct: 6 EFYQGKNVLITGATGFMGKVLLEKLLRSCPNTKAVYVLVRHKAGQKPRERVAEMMSCKLF 65
Query: 100 WRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAV 159
+LR E PD KV A++ + + P L +S+ D+ TL+ ++IVFH AATVRF+E ++ A+
Sbjct: 66 DKLRDEQPDCAQKVIAISSELTQPELDMSKEDQDTLIDCIDIVFHCAATVRFNESLRDAM 125
Query: 160 KINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETG 219
++NV + +L LA++MK L+ F+HVSTA+ +C R++I+E YP P+ + LI+ +
Sbjct: 126 QLNVIATRQLLYLAQKMKKLEVFIHVSTAYANCNRKQIEEVVYPPPVDPKKLIESLEWMD 185
Query: 220 DEELSEMTPN--------------------------------RVHISGT-------GWID 240
D ++++TP R I G GWID
Sbjct: 186 DSLVNDITPKLIGDRPNTYTYTKALAEYVVQQEGSKLNIAIVRPSIVGASWKEPFPGWID 245
Query: 241 NVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288
N GP G+ + G+L T + N V D++PVD+VVN+ ++ AW G
Sbjct: 246 NFNGPSGLFIAAGKGILRTMRASNNAVADLIPVDVVVNTTLAAAWYSG 293
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Xenopus laevis (taxid: 8355) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 206 bits (523), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 162/288 (56%), Gaps = 39/288 (13%)
Query: 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLF 99
E+Y K + LTG TGFMGK ++EKLLRSCP +K +Y+LVRPK G+ + R++ I +LF
Sbjct: 6 EYYEGKNVLLTGATGFMGKVLLEKLLRSCPKVKAVYVLVRPKAGQTPEARIEEITSCKLF 65
Query: 100 WRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAV 159
RLR E PDF+ K+ + + + P L LS + L++ +NI+FH AATVRF+E ++ AV
Sbjct: 66 DRLREEQPDFKEKIIVITSELTQPELDLSNPVKEKLIECINIIFHCAATVRFNETLRDAV 125
Query: 160 KINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETG 219
++NV + +L LA++M +L+ F+HVSTA+ +C R+ I+E YP P+ + L+ +
Sbjct: 126 QLNVLSTKQLLSLAQQMTNLEVFMHVSTAYAYCNRKHIEEVVYPPPVDPKKLMDSLEWMD 185
Query: 220 DEELSEMTPN--------------------------------RVHISGT-------GWID 240
D ++++TP R I G GWID
Sbjct: 186 DSLVNDITPKLIGDRPNTYTYTKALAEYVVQQEGARLNTAIIRPSIVGASWKEPFPGWID 245
Query: 241 NVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288
N GP G+ + G+L T + V D+VPVD+VVN ++ AW G
Sbjct: 246 NFNGPSGLFIAAGKGILRTMRASNGAVADLVPVDVVVNMTLAAAWYSG 293
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Gallus gallus (taxid: 9031) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 153/284 (53%), Gaps = 39/284 (13%)
Query: 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFW 100
FY +K+I +TG TGF+GK ++EKL R+ PHLK IY+LVRPK G+ +QER+ I +LF
Sbjct: 7 FYSNKSILITGATGFLGKVLMEKLFRTSPHLKVIYILVRPKSGQTLQERVFQILNSKLFE 66
Query: 101 RLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVK 160
+++ P+ K+ ++ D + +S+ D L+ NI+FH AATVRFD H++ AV+
Sbjct: 67 KVKEVCPNVHEKIRPISADLNQRDFAISKEDVQELLSCTNIIFHCAATVRFDAHLREAVQ 126
Query: 161 INVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGD 220
+NV Q +L +A +M L+AF+H+STAF++C IDE YP P++ +I + D
Sbjct: 127 LNVTATQQLLLMASQMPKLEAFIHISTAFSNCNLSHIDEVIYPCPVEPRKIIDSMEWLDD 186
Query: 221 EELSEMTPN--------------------------------RVHISGT-------GWIDN 241
+ E+TP R I G GW+DN
Sbjct: 187 SIIEEITPKLIGDRPNTYTYTKALGEIVVQQESGNLNVAIVRPSIVGATWQEPFPGWVDN 246
Query: 242 VYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAW 285
+ GP G+++ G L + V D++PVD VVN I++ W
Sbjct: 247 LNGPSGLIIATGKGFLRSIKATPMAVADVIPVDTVVNLTIAVGW 290
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 156/284 (54%), Gaps = 39/284 (13%)
Query: 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFW 100
FY K+I +TG TGFMGK ++EKL R+ P LK +Y+LVRPK+G+ +Q+R+ I + +LF
Sbjct: 7 FYGGKSILITGATGFMGKVLMEKLFRTSPDLKVVYILVRPKQGQTLQQRVFQILDSKLFE 66
Query: 101 RLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVK 160
+++ P+ K+ A++ D + +S+ D L+ NI+FH AATVRFD+H++ AV+
Sbjct: 67 KVKEVCPNVHEKIRAISADLNQNDFAISKEDMKELLSHTNIIFHCAATVRFDDHLRHAVQ 126
Query: 161 INVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGD 220
+NV Q +L +A +M L+AF+H+STAF++C + IDE YP P++ + +I + D
Sbjct: 127 LNVTATQQLLLMASQMPKLEAFIHISTAFSNCNLKHIDEVVYPCPVEPKKIIDSMEWLDD 186
Query: 221 EELSEMTPN--------------------------------RVHISGT-------GWIDN 241
+ E+TP R I G GW+DN
Sbjct: 187 AIIDEITPKLIGDWPNTYTYTKALGEVVVQQEGGNLNIAIIRPSIMGATWQEPFPGWVDN 246
Query: 242 VYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAW 285
+ GP G+++ G L + V D++P D VVN +++ W
Sbjct: 247 LNGPSGLIIAAGKGFLRSIRATPMAVADLIPADTVVNLTLAVGW 290
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q96K12|FACR2_HUMAN Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 154/284 (54%), Gaps = 39/284 (13%)
Query: 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFW 100
FY K+I +TG TGF+GK ++EKL R+ P LK IY+LVRPK G+ +Q+R+ I + +LF
Sbjct: 7 FYGGKSILITGATGFLGKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVFQILDSKLFE 66
Query: 101 RLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVK 160
+++ P+ K+ A+ D + +S+ D L+ NI+FH AATVRFD+ ++ AV+
Sbjct: 67 KVKEVCPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTNIIFHCAATVRFDDTLRHAVQ 126
Query: 161 INVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGD 220
+NV + +L +A +M L+AF+H+STA+++C + IDE YP P++ + +I + D
Sbjct: 127 LNVTATRQLLLMASQMPKLEAFIHISTAYSNCNLKHIDEVIYPCPVEPKKIIDSLEWLDD 186
Query: 221 EELSEMTPN--------------------------------RVHISGT-------GWIDN 241
+ E+TP R I G GW+DN
Sbjct: 187 AIIDEITPKLIRDWPNIYTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQEPFPGWVDN 246
Query: 242 VYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAW 285
+ GP G+++ G L V D++PVD VVN M+++ W
Sbjct: 247 INGPNGIIIATGKGFLRAIKATPMAVADVIPVDTVVNLMLAVGW 290
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 303 | ||||||
| 193622556 | 551 | PREDICTED: putative fatty acyl-CoA reduc | 0.927 | 0.509 | 0.528 | 5e-94 | |
| 328720028 | 553 | PREDICTED: putative fatty acyl-CoA reduc | 0.927 | 0.508 | 0.525 | 5e-93 | |
| 326510115 | 552 | predicted protein [Hordeum vulgare subsp | 0.933 | 0.512 | 0.489 | 8e-78 | |
| 328720030 | 552 | PREDICTED: putative fatty acyl-CoA reduc | 0.957 | 0.525 | 0.485 | 2e-77 | |
| 322803051 | 530 | hypothetical protein SINV_00151 [Solenop | 0.914 | 0.522 | 0.423 | 2e-68 | |
| 332030738 | 537 | Putative fatty acyl-CoA reductase [Acrom | 0.871 | 0.491 | 0.429 | 1e-66 | |
| 307176419 | 541 | Fatty acyl-CoA reductase 1 [Camponotus f | 0.881 | 0.493 | 0.427 | 4e-66 | |
| 345496232 | 566 | PREDICTED: putative fatty acyl-CoA reduc | 0.874 | 0.468 | 0.430 | 8e-66 | |
| 156542672 | 543 | PREDICTED: putative fatty acyl-CoA reduc | 0.874 | 0.488 | 0.430 | 1e-65 | |
| 156542678 | 538 | PREDICTED: putative fatty acyl-CoA reduc | 0.834 | 0.470 | 0.445 | 8e-65 |
| >gi|193622556|ref|XP_001950244.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 350 bits (898), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 169/320 (52%), Positives = 223/320 (69%), Gaps = 39/320 (12%)
Query: 1 PWTDIVNSKYFTDPLELLGEKSFGSPDDIPDDEIGTPMQEFYRDKTIFLTGGTGFMGKTV 60
P DI+NSKY+ DPLELLGE+SF P +I + EIG+P+QEF+RD +FLTGGTGFMGK +
Sbjct: 21 PIKDIINSKYYLDPLELLGERSFNEPREIEESEIGSPVQEFFRDGVVFLTGGTGFMGKVL 80
Query: 61 VEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120
VEKLLR+CPH+KHIYLL+R KKGK++ +RL+ IFEDRLF RL+ EVP + KVS VAGDC
Sbjct: 81 VEKLLRTCPHIKHIYLLIRSKKGKNVDQRLEDIFEDRLFKRLKHEVPKYYHKVSGVAGDC 140
Query: 121 SLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLK 180
SLPGLGLS + R TL+ +VNI+FHGAATVRFDEHI++A+ INV G + +L LAR++ +LK
Sbjct: 141 SLPGLGLSVSSRNTLINEVNIIFHGAATVRFDEHIRVAMNINVSGTRELLSLARKITNLK 200
Query: 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMT-------PNRVHI 233
HVSTA+++C R ++E+FY YE++++LIS D+ L +MT PN
Sbjct: 201 VMAHVSTAYSNCNRLHVEEKFYDPIADYEDVLKLISSNDDQTLQDMTKEIIGDLPNTYAF 260
Query: 234 SGT--------------------------------GWIDNVYGPIGMLVGIATGVLHTHL 261
+ + GWIDNVYGP G++VG TGVLHT+
Sbjct: 261 TKSLAEDAIRREAQDLPILVFRPTVVIATYREPVRGWIDNVYGPTGLIVGAGTGVLHTYF 320
Query: 262 INLNTVTDMVPVDLVVNSMI 281
+ N +TDM+PVD+VVN++I
Sbjct: 321 GDSNIITDMIPVDMVVNALI 340
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328720028|ref|XP_001946873.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 347 bits (889), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 168/320 (52%), Positives = 223/320 (69%), Gaps = 39/320 (12%)
Query: 4 DIVNSKYFTDPLELLGEKSFGSPDDIPDDEIGTPMQEFYRDKTIFLTGGTGFMGKTVVEK 63
DI+NSKY DPLELLGE+SF P ++ + EIG+P+QEF+RD +FLTGGTGFMGK +VEK
Sbjct: 25 DIINSKYCLDPLELLGERSFNEPREVDESEIGSPIQEFFRDGVVFLTGGTGFMGKVLVEK 84
Query: 64 LLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123
LLR+CPH+KHIYLL+R KKGK++ ERL+ IFEDRLF RL+ EVP + KVS +AGDCSLP
Sbjct: 85 LLRTCPHIKHIYLLIRSKKGKNVDERLEDIFEDRLFKRLKYEVPKYYHKVSGIAGDCSLP 144
Query: 124 GLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFV 183
GLGLS + R TL+K+VNI+FHGAATVRFDEHI++A+ INV G + M+ LA+ + +LK
Sbjct: 145 GLGLSVSSRNTLIKEVNIIFHGAATVRFDEHIRVAMDINVSGTREMMNLAKTITNLKVIA 204
Query: 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMT-------PNRVHISGT 236
H+STAF++C R +DE+FY Y+++++L+S T D+ L MT PN + +
Sbjct: 205 HISTAFSNCNRLHVDEKFYDPIADYKDVLKLVSSTDDQTLHGMTSKILGDLPNTYSFTKS 264
Query: 237 --------------------------------GWIDNVYGPIGMLVGIATGVLHTHLINL 264
GWIDNVYGP G++VG TGVLHT+ ++
Sbjct: 265 LAEDAIRREAQDLPILVFRPTVVVGTYREPVRGWIDNVYGPTGIVVGACTGVLHTYFLDS 324
Query: 265 NTVTDMVPVDLVVNSMISIA 284
N VTD++PVD+VVN++I A
Sbjct: 325 NFVTDIIPVDIVVNALICAA 344
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|326510115|dbj|BAJ87274.1| predicted protein [Hordeum vulgare subsp. vulgare] | Back alignment and taxonomy information |
|---|
Score = 296 bits (758), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 163/333 (48%), Positives = 216/333 (64%), Gaps = 50/333 (15%)
Query: 4 DIVNSKYFTDPLELLGEKSFGSP------DDIPDDEIGTPMQEFYRDKTIFLTGGTGFMG 57
+IV ++ +PLEL+GE SF +P D +P +I QEFY+D TIF+TGGTGFMG
Sbjct: 24 EIVTDEFPLNPLELVGELSFDNPEVLEETDKLPRSDI----QEFYKDATIFITGGTGFMG 79
Query: 58 KTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVA 117
K ++EKL RSCPHLKHIYLL+R KKGKD+ ER+DAIFEDRLF RL+ E P F K+SA+A
Sbjct: 80 KMLIEKLSRSCPHLKHIYLLIRNKKGKDVNERIDAIFEDRLFMRLKHERPKFYHKISAIA 139
Query: 118 GDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMK 177
GD SLPGLG+S DR L + VNIVFH AAT+RFDEHI+ A+ INV G + ++ LA+EM
Sbjct: 140 GDASLPGLGISSCDRQKLAENVNIVFHAAATIRFDEHIRTAININVLGTREIINLAKEMT 199
Query: 178 DLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLI-SETGDEELSEMTPNRV----- 231
+LKA ++VSTA+ +C +I+E+FY P Y+ +I L+ S D++L +TP+
Sbjct: 200 NLKACMYVSTAYANCVHNKIEEKFYGAPYNYDGVISLVTSANDDKKLENITPSLTAGWPN 259
Query: 232 --------------HISG--------------------TGWIDNVYGPIGMLVGIATGVL 257
H S GWIDNVYGPIGM+VG+ GVL
Sbjct: 260 TYTFTKALAEDLAKHESAGLPFGIFRPSVVISTYNEPVRGWIDNVYGPIGMIVGVGAGVL 319
Query: 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIGES 290
HTH ++ V D+VPVDLVVN++I A+ + ++
Sbjct: 320 HTHHCDVTKVVDLVPVDLVVNALICSAYKVSKN 352
|
Source: Hordeum vulgare subsp. vulgare Species: Hordeum vulgare Genus: Hordeum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|328720030|ref|XP_001944359.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/346 (48%), Positives = 220/346 (63%), Gaps = 56/346 (16%)
Query: 4 DIVNSKYFTDPLELLGEKSFGSP------DDIPDDEIGTPMQEFYRDKTIFLTGGTGFMG 57
+IV + +PL+L+GE SF +P D +P ++ QEFYRD +IF+TGGTGFMG
Sbjct: 24 EIVTDDFPLNPLQLVGELSFDNPLTLEETDKLPRSDV----QEFYRDTSIFITGGTGFMG 79
Query: 58 KTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVA 117
K ++EKL RSCPHLKHIYLL+R KKGKD+ ER+DAIF+DRLF RL+ E P F K+SA+A
Sbjct: 80 KMLIEKLSRSCPHLKHIYLLIRNKKGKDVNERIDAIFDDRLFMRLKHERPKFYHKISAIA 139
Query: 118 GDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMK 177
GD SLPGLG+S DR TL + VNIVFH AAT+RFDEHI+ A+ INV G + ++ LA+EM
Sbjct: 140 GDASLPGLGISPRDRQTLAENVNIVFHAAATIRFDEHIRTAININVLGTREIINLAKEMT 199
Query: 178 DLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLI-SETGDEELSEMTPN------- 229
LKA ++VSTA+ +C +I+E+FY P Y +I L+ S D++L ++TP+
Sbjct: 200 KLKACMYVSTAYANCVHSKIEEKFYEAPYNYNGVISLVTSANNDKKLEDITPSLTAGWPN 259
Query: 230 ---------------------------RVHISG-----TGWIDNVYGPIGMLVGIATGVL 257
V IS GWIDNVYGPIGM+VG+ GVL
Sbjct: 260 TYTFTKALAEDLAKHEAVGLPLGIFRPSVVISTYNEPVRGWIDNVYGPIGMIVGVGAGVL 319
Query: 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIGESGKVEKAINKIENN 303
HTH ++ V D+VPVDLVVN++I A+ KV K IE+N
Sbjct: 320 HTHHCDVTKVVDLVPVDLVVNALICSAY------KVSKTTPTIESN 359
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322803051|gb|EFZ23139.1| hypothetical protein SINV_00151 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/319 (42%), Positives = 198/319 (62%), Gaps = 42/319 (13%)
Query: 24 GSPDDIPDDEIGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG 83
SP++ P +E +P+QEFY +TIF+TGGTGFMGK ++EK+LR+CP + IYLLVRPKKG
Sbjct: 25 SSPENSPVNEKLSPIQEFYYGQTIFITGGTGFMGKLLIEKILRTCPGVTSIYLLVRPKKG 84
Query: 84 KDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVF 143
KD+ +R + IF+D +F +LR E+P FR ++ A+AGDCS P LG+S DRATL+++V+IVF
Sbjct: 85 KDVHQRTEEIFDDAVFMKLRDELPKFRHQIVAIAGDCSQPNLGMSAQDRATLIREVSIVF 144
Query: 144 HGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYP 203
H AATVRFDE +K+AV INV + ++ L +E+ +LK+F+HVSTA+ +CP+ I+E+FY
Sbjct: 145 HVAATVRFDEKLKLAVPINVRSTRDVVNLCKEITNLKSFIHVSTAYANCPQSLIEEKFYE 204
Query: 204 VPLKYENLIQLISETGDEELSEMTPN---------------------------------- 229
P+ + LI L+ D+ ++TP
Sbjct: 205 PPMDSDKLIALMECVEDKLAEDITPQLLGKWPNTYTFTKAVAENVIRKQAGDLPAGIFRP 264
Query: 230 RVHISG-----TGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIA 284
+ IS GWIDN+YGP G+ G TG+L + + + ++VP DL VN++I+ A
Sbjct: 265 AIVISTYQEPMRGWIDNLYGPTGVAAGAGTGLLRSIHCDGSVHANVVPADLTVNALIACA 324
Query: 285 WSIGESGKVEKAINKIENN 303
W + +K NK N+
Sbjct: 325 WDVAND---QKTNNKSRND 340
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332030738|gb|EGI70414.1| Putative fatty acyl-CoA reductase [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 189/303 (62%), Gaps = 39/303 (12%)
Query: 30 PDDEIGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQER 89
P +E +P+QEFY ++IF+TGGTGFMGK ++EKLLR+CP + IYLLVRPKKGKD+ +R
Sbjct: 31 PVNEKLSPIQEFYNGQSIFITGGTGFMGKLLIEKLLRTCPGVTSIYLLVRPKKGKDVHQR 90
Query: 90 LDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATV 149
+ IF+D +F +LR E P FR ++ A+AGDCS P LG+S DRATL+++V+IVFH AATV
Sbjct: 91 TEDIFDDTVFSKLRDEQPKFRHQIVAIAGDCSQPNLGISAQDRATLIREVSIVFHVAATV 150
Query: 150 RFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYE 209
RFDE +K+AV INV + ++ L +E+ +LK+F+HVSTA+ +CP+ I+E+FY P+ +
Sbjct: 151 RFDEKLKLAVPINVRSTRDVVNLCKEITNLKSFIHVSTAYANCPQSVIEEKFYDPPMDSD 210
Query: 210 NLIQLISETGDEELSEMTPN----------------------------------RVHIS- 234
LI LI D+ ++TP + IS
Sbjct: 211 KLIALIECIEDKLAEDITPQLLGKWPNTYTFTKAVAENVIRKQAGDLPVGIFRPAIVIST 270
Query: 235 ----GTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGES 290
GWIDN+YGP G+ G TG+L + + + ++VP DL VN++I+ AW +
Sbjct: 271 YLEPARGWIDNLYGPTGVAAGAGTGLLRSIHCDGSVHANVVPADLTVNALIACAWDVAND 330
Query: 291 GKV 293
++
Sbjct: 331 QRI 333
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307176419|gb|EFN65993.1| Fatty acyl-CoA reductase 1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 191/309 (61%), Gaps = 42/309 (13%)
Query: 30 PDDEIGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQER 89
P +E +P+QEFY ++IF+TGGTGFMGK ++EKLLR+CP + IYLLVRPKKGKD+ +R
Sbjct: 37 PINENLSPIQEFYYGQSIFITGGTGFMGKLLIEKLLRTCPGVASIYLLVRPKKGKDVHQR 96
Query: 90 LDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATV 149
+ IF+D LF +LR E P FR ++ A+AGDCS P LG+S DR T++++V+IVFH AATV
Sbjct: 97 TEEIFDDPLFIKLRDEQPKFRHQIVAIAGDCSQPNLGISWQDRTTIIREVSIVFHVAATV 156
Query: 150 RFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYE 209
RFDE +K+AV INV + +L L +E+ +LK+FVHVSTA+ +CP+ I+E+FY P+ +
Sbjct: 157 RFDEKLKLAVPINVRSTRDILNLCKEIPNLKSFVHVSTAYANCPQRVIEEKFYDPPMDSD 216
Query: 210 NLIQLISETGDEELSEMTPN--------------------RVHISG-------------- 235
LI L+ D+ ++TP R +
Sbjct: 217 KLIALMECVEDKLAEDITPQLLGKWPNTYTYTKAVAENVIRKQVGDLPIGVFRPAIVIST 276
Query: 236 -----TGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGES 290
GWIDN+YGP G+ G TG+L + + + ++VP D VN++I+ AW IG
Sbjct: 277 YIEPVRGWIDNLYGPTGVAAGAGTGLLRSIHCDGSVHANVVPADFTVNALIACAWDIGN- 335
Query: 291 GKVEKAINK 299
++++ NK
Sbjct: 336 --IQRSNNK 342
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345496232|ref|XP_003427678.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like isoform 2 [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 187/304 (61%), Gaps = 39/304 (12%)
Query: 36 TPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFE 95
T +Q+FY ++IF+TGGTGFMGK ++EKLLRSCP + +YLLVRPKKGKD+ +R + +F+
Sbjct: 69 TTLQQFYTGQSIFVTGGTGFMGKLLIEKLLRSCPGIAFVYLLVRPKKGKDVHQRTEELFD 128
Query: 96 DRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHI 155
D LF +LR E P FR ++ A++GDCSLPGLG+S DRATLV++V+IVFH AATVRFDE +
Sbjct: 129 DPLFSKLREEQPKFRHQIVAISGDCSLPGLGISAADRATLVREVSIVFHVAATVRFDEKL 188
Query: 156 KMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLI 215
K+AV INV + +L L +EM LK+ +HVSTA+ +C + I+E+FY P+ LI L+
Sbjct: 189 KLAVAINVQSPRDILSLCKEMPQLKSCIHVSTAYANCVQNTIEEKFYDAPIDGNKLISLV 248
Query: 216 SETGDEELSEMT-------PNRVHISGT-------------------------------- 236
D+ + ++T PN +
Sbjct: 249 ETMDDKLVDDITRPLLGRWPNTYTFTKAVAEDIVRKEGVDMPVGIFRPAIVISTYQEPLR 308
Query: 237 GWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGESGKVEKA 296
GWIDN+YGPIG+ G TG+L + + + ++VP D+ VN++I+ AW + K K
Sbjct: 309 GWIDNMYGPIGVAAGAGTGLLRSIHCDGSMRANVVPGDMTVNALIASAWDVATIKKNNKN 368
Query: 297 INKI 300
N+I
Sbjct: 369 SNEI 372
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156542672|ref|XP_001602734.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like isoform 1 [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 187/304 (61%), Gaps = 39/304 (12%)
Query: 36 TPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFE 95
T +Q+FY ++IF+TGGTGFMGK ++EKLLRSCP + +YLLVRPKKGKD+ +R + +F+
Sbjct: 46 TTLQQFYTGQSIFVTGGTGFMGKLLIEKLLRSCPGIAFVYLLVRPKKGKDVHQRTEELFD 105
Query: 96 DRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHI 155
D LF +LR E P FR ++ A++GDCSLPGLG+S DRATLV++V+IVFH AATVRFDE +
Sbjct: 106 DPLFSKLREEQPKFRHQIVAISGDCSLPGLGISAADRATLVREVSIVFHVAATVRFDEKL 165
Query: 156 KMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLI 215
K+AV INV + +L L +EM LK+ +HVSTA+ +C + I+E+FY P+ LI L+
Sbjct: 166 KLAVAINVQSPRDILSLCKEMPQLKSCIHVSTAYANCVQNTIEEKFYDAPIDGNKLISLV 225
Query: 216 SETGDEELSEMT-------PNRVHISGT-------------------------------- 236
D+ + ++T PN +
Sbjct: 226 ETMDDKLVDDITRPLLGRWPNTYTFTKAVAEDIVRKEGVDMPVGIFRPAIVISTYQEPLR 285
Query: 237 GWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGESGKVEKA 296
GWIDN+YGPIG+ G TG+L + + + ++VP D+ VN++I+ AW + K K
Sbjct: 286 GWIDNMYGPIGVAAGAGTGLLRSIHCDGSMRANVVPGDMTVNALIASAWDVATIKKNNKN 345
Query: 297 INKI 300
N+I
Sbjct: 346 SNEI 349
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156542678|ref|XP_001602857.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 130/292 (44%), Positives = 181/292 (61%), Gaps = 39/292 (13%)
Query: 36 TPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFE 95
TP+Q+FY + IF+TGGTGF+GK ++EKLLRSC L+ IYLLVRPKK K I+ R++ +F+
Sbjct: 45 TPLQDFYSHQCIFITGGTGFLGKILIEKLLRSCVDLERIYLLVRPKKEKSIESRMEEMFK 104
Query: 96 DRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHI 155
D ++ RL+ ++P F KV AVAGDCS+ GLGLS +DR L++ V+IVFH AATVRFDE +
Sbjct: 105 DPIYQRLKEQMPKFHHKVVAVAGDCSIQGLGLSTSDRDLLMRDVSIVFHVAATVRFDEKL 164
Query: 156 KMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLI 215
K+A INV ++ L ++M+ LK+FVHVSTA+ +C I E+FY P+K E L+ L+
Sbjct: 165 KLASAINVQSTADIIDLCKDMQKLKSFVHVSTAYANCISREITEKFYDYPIKNEELLSLV 224
Query: 216 SETGDEELSEMTPNRVH----------------------------------ISGT----- 236
+ DE L+E+ P + IS
Sbjct: 225 NCLPDETLNEIAPRVISPWPNTYAFTKALAEDLVRSRNKSLPMGIFRPGIVISTANEPIP 284
Query: 237 GWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288
GWIDN YGP G++ G+ATGVL T + ++VPVDL VN++I+ AW +
Sbjct: 285 GWIDNFYGPTGVVAGVATGVLRTLHCDPKNKANIVPVDLTVNALIASAWDVA 336
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 303 | ||||||
| FB|FBgn0039620 | 517 | CG1443 [Drosophila melanogaste | 0.646 | 0.379 | 0.5 | 2.9e-62 | |
| FB|FBgn0034145 | 625 | CG5065 [Drosophila melanogaste | 0.663 | 0.321 | 0.432 | 1.6e-57 | |
| UNIPROTKB|E2R4R9 | 514 | FAR1 "Uncharacterized protein" | 0.633 | 0.373 | 0.447 | 7.8e-56 | |
| MGI|MGI:1914670 | 515 | Far1 "fatty acyl CoA reductase | 0.633 | 0.372 | 0.447 | 9.9e-56 | |
| RGD|1306647 | 515 | Far1 "fatty acyl CoA reductase | 0.633 | 0.372 | 0.447 | 1.6e-55 | |
| UNIPROTKB|Q66H50 | 515 | Far1 "Fatty acyl-CoA reductase | 0.633 | 0.372 | 0.447 | 1.6e-55 | |
| UNIPROTKB|G8ENM4 | 515 | FAR1 "Uncharacterized protein" | 0.633 | 0.372 | 0.447 | 2e-55 | |
| ZFIN|ZDB-GENE-040426-2908 | 464 | far1 "fatty acyl CoA reductase | 0.623 | 0.407 | 0.470 | 2e-55 | |
| UNIPROTKB|E9PNW8 | 335 | FAR1 "Fatty acyl-CoA reductase | 0.633 | 0.573 | 0.442 | 3.3e-55 | |
| UNIPROTKB|Q8WVX9 | 515 | FAR1 "Fatty acyl-CoA reductase | 0.633 | 0.372 | 0.442 | 3.3e-55 |
| FB|FBgn0039620 CG1443 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 506 (183.2 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 101/202 (50%), Positives = 141/202 (69%)
Query: 28 DIPDDEIGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQ 87
D+ D+ +PMQ FY+DK +FLTGGTGF GK ++EKLLR + IYLL+R KKGKD
Sbjct: 25 DVKDE---SPMQMFYKDKGVFLTGGTGFFGKIIIEKLLR-VTEVGQIYLLIRTKKGKDAF 80
Query: 88 ERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAA 147
R++ +F D +F +++ P +R +++ ++GDCSLPGLG+S +R T+++ VNIV H AA
Sbjct: 81 ARIEDLFNDPVFAKMKQVNPKYRCQITIISGDCSLPGLGISADERETIMENVNIVLHSAA 140
Query: 148 TVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLK 207
TVRFDE +KMA+ INV G + +++LA+E+ +LKA VHVSTAF HC I E FY +
Sbjct: 141 TVRFDEKLKMAIAINVHGTKEIIKLAKEIVNLKALVHVSTAFAHCNMRHIQERFYSGTMS 200
Query: 208 YENLIQLISETGDEE-LSEMTP 228
EN +L SE DE L+ +TP
Sbjct: 201 GENAFKL-SECLDEHTLNTLTP 221
|
|
| FB|FBgn0034145 CG5065 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 465 (168.7 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 87/201 (43%), Positives = 133/201 (66%)
Query: 31 DDEIGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL 90
DD P+ +FY +++F+TGGTGFMGK +VEKLLRSCP +++IYLL+RPK+G+++ RL
Sbjct: 112 DDTSYVPIAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARL 171
Query: 91 DAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVR 150
+ LF LR E P SKV ++GD + LG+SE D+ L + V++VFH AATV+
Sbjct: 172 TELLNAPLFESLRQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVK 231
Query: 151 FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYEN 210
FDE +K++V IN+ G + +++L M L A +HVSTA+ +C R + E Y P ++
Sbjct: 232 FDEKLKLSVTINMLGTKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDD 291
Query: 211 LIQLISETGDEELSEMTPNRV 231
+I LI+ ++ L ++TP +
Sbjct: 292 IISLINWLPEDILDQLTPRLI 312
|
|
| UNIPROTKB|E2R4R9 FAR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 462 (167.7 bits), Expect = 7.8e-56, Sum P(2) = 7.8e-56
Identities = 86/192 (44%), Positives = 132/192 (68%)
Query: 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLF 99
E+Y K + LTG TGF+GK ++EKLLRSCP + +Y+LVR K G+ QER++ + +LF
Sbjct: 6 EYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVISGKLF 65
Query: 100 WRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAV 159
RLR E PDFR KV A+ + + P L LSE D+ ++ +NI+FH AATVRF+E+++ AV
Sbjct: 66 DRLRDENPDFREKVIAINSELTQPKLALSEEDKEIIIDSINIIFHCAATVRFNENLRDAV 125
Query: 160 KINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETG 219
++NV + ++ LA++MK+L+ F+HVSTA+ +C R+ IDE YP P+ + LI +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMD 185
Query: 220 DEELSEMTPNRV 231
D ++++TP +
Sbjct: 186 DGLVNDITPKLI 197
|
|
| MGI|MGI:1914670 Far1 "fatty acyl CoA reductase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 461 (167.3 bits), Expect = 9.9e-56, Sum P(2) = 9.9e-56
Identities = 86/192 (44%), Positives = 131/192 (68%)
Query: 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLF 99
E+Y K I LTG TGF+GK ++EKLLRSCP + +Y+LVR K G+ QER++ I +LF
Sbjct: 6 EYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSKLF 65
Query: 100 WRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAV 159
RLR E PDFR K+ A+ + + P L LSE D+ ++ N++FH AATVRF+E+++ AV
Sbjct: 66 DRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAV 125
Query: 160 KINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETG 219
++NV + ++ LA++MK+L+ F+HVSTA+ +C R+ IDE YP P+ + LI +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMD 185
Query: 220 DEELSEMTPNRV 231
D ++++TP +
Sbjct: 186 DGLVNDITPKLI 197
|
|
| RGD|1306647 Far1 "fatty acyl CoA reductase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 459 (166.6 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 86/192 (44%), Positives = 131/192 (68%)
Query: 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLF 99
E+Y K I LTG TGF+GK ++EKLLRSCP + +Y+LVR K G+ QER++ I +LF
Sbjct: 6 EYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGKLF 65
Query: 100 WRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAV 159
RLR E PDFR K+ A+ + + P L LSE D+ ++ N++FH AATVRF+E+++ AV
Sbjct: 66 DRLRDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAV 125
Query: 160 KINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETG 219
++NV + ++ LA++MK+L+ F+HVSTA+ +C R+ IDE YP P+ + LI +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMD 185
Query: 220 DEELSEMTPNRV 231
D ++++TP +
Sbjct: 186 DGLVNDITPKLI 197
|
|
| UNIPROTKB|Q66H50 Far1 "Fatty acyl-CoA reductase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 459 (166.6 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 86/192 (44%), Positives = 131/192 (68%)
Query: 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLF 99
E+Y K I LTG TGF+GK ++EKLLRSCP + +Y+LVR K G+ QER++ I +LF
Sbjct: 6 EYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGKLF 65
Query: 100 WRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAV 159
RLR E PDFR K+ A+ + + P L LSE D+ ++ N++FH AATVRF+E+++ AV
Sbjct: 66 DRLRDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAV 125
Query: 160 KINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETG 219
++NV + ++ LA++MK+L+ F+HVSTA+ +C R+ IDE YP P+ + LI +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMD 185
Query: 220 DEELSEMTPNRV 231
D ++++TP +
Sbjct: 186 DGLVNDITPKLI 197
|
|
| UNIPROTKB|G8ENM4 FAR1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 458 (166.3 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 86/192 (44%), Positives = 131/192 (68%)
Query: 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLF 99
E+Y K I LTG TGF+GK ++EKLLRSCP + +Y+LVR K G+ +ER++ +LF
Sbjct: 6 EYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPKERVEEAISGKLF 65
Query: 100 WRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAV 159
RLR E PDFR K+ A+ + + P L LSE D+ T++ NI+FH AATVRF+E+++ AV
Sbjct: 66 DRLRDENPDFREKIIAINSELTQPKLALSEEDKKTIIDSTNIIFHCAATVRFNENLRDAV 125
Query: 160 KINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETG 219
++NV + ++ LA++MK+L+ F+HVSTA+ +C R+ IDE YP P+ + LI +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPQKLINSLEWMD 185
Query: 220 DEELSEMTPNRV 231
D ++++TP +
Sbjct: 186 DGLVNDITPKLI 197
|
|
| ZFIN|ZDB-GENE-040426-2908 far1 "fatty acyl CoA reductase 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 451 (163.8 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 89/189 (47%), Positives = 123/189 (65%)
Query: 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLF 99
E+Y K + +TG TGFMGK ++EKLLRSCP +K Y+LVRPK G+ R+ + +LF
Sbjct: 6 EYYVGKNVLITGATGFMGKVLLEKLLRSCPGVKAAYVLVRPKAGQAPDARIADMINCKLF 65
Query: 100 WRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAV 159
RLR + PDF K+ A+ D + P L LS D+ TL +N+VFH AAT+RF+E +K A+
Sbjct: 66 DRLREDQPDFAGKIVAINSDLTQPNLDLSAEDQETLTGCINVVFHCAATIRFNEPLKDAM 125
Query: 160 KINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETG 219
++NV Q M+ LA MK L+ F+HVSTA+ +C RE I+E YP P+ Y LI +
Sbjct: 126 QLNVLATQKMVSLAHRMKHLEVFIHVSTAYANCDRELIEEVVYPPPVDYRKLIDTLEWMD 185
Query: 220 DEELSEMTP 228
D+ +S MTP
Sbjct: 186 DKLVSLMTP 194
|
|
| UNIPROTKB|E9PNW8 FAR1 "Fatty acyl-CoA reductase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 459 (166.6 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 85/192 (44%), Positives = 131/192 (68%)
Query: 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLF 99
E+Y K + LTG TGF+GK ++EKLLRSCP + +Y+LVR K G+ QER++ + +LF
Sbjct: 6 EYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLF 65
Query: 100 WRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAV 159
RLR E PDFR K+ A+ + + P L LSE D+ ++ NI+FH AATVRF+E+++ AV
Sbjct: 66 DRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAV 125
Query: 160 KINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETG 219
++NV + ++ LA++MK+L+ F+HVSTA+ +C R+ IDE YP P+ + LI +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMD 185
Query: 220 DEELSEMTPNRV 231
D ++++TP +
Sbjct: 186 DGLVNDITPKLI 197
|
|
| UNIPROTKB|Q8WVX9 FAR1 "Fatty acyl-CoA reductase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 459 (166.6 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 85/192 (44%), Positives = 131/192 (68%)
Query: 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLF 99
E+Y K + LTG TGF+GK ++EKLLRSCP + +Y+LVR K G+ QER++ + +LF
Sbjct: 6 EYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLF 65
Query: 100 WRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAV 159
RLR E PDFR K+ A+ + + P L LSE D+ ++ NI+FH AATVRF+E+++ AV
Sbjct: 66 DRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAV 125
Query: 160 KINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETG 219
++NV + ++ LA++MK+L+ F+HVSTA+ +C R+ IDE YP P+ + LI +
Sbjct: 126 QLNVIATRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMD 185
Query: 220 DEELSEMTPNRV 231
D ++++TP +
Sbjct: 186 DGLVNDITPKLI 197
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 303 | |||
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 3e-86 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 7e-69 | |
| PLN02996 | 491 | PLN02996, PLN02996, fatty acyl-CoA reductase | 7e-28 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 2e-25 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 5e-24 | |
| PLN02503 | 605 | PLN02503, PLN02503, fatty acyl-CoA reductase 2 | 1e-22 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 2e-20 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 1e-19 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 2e-16 | |
| TIGR03443 | 1389 | TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh | 9e-11 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 5e-09 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 8e-08 | |
| COG1086 | 588 | COG1086, COG1086, Predicted nucleoside-diphosphate | 2e-06 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 6e-05 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 7e-05 | |
| PLN02996 | 491 | PLN02996, PLN02996, fatty acyl-CoA reductase | 8e-05 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 1e-04 | |
| cd05193 | 295 | cd05193, AR_like_SDR_e, aldehyde reductase, flavon | 1e-04 | |
| pfam02719 | 280 | pfam02719, Polysacc_synt_2, Polysaccharide biosynt | 4e-04 | |
| cd09811 | 354 | cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD | 5e-04 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 6e-04 | |
| TIGR04130 | 337 | TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd | 0.001 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 0.001 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 0.002 | |
| COG1088 | 340 | COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel | 0.002 | |
| PRK09072 | 263 | PRK09072, PRK09072, short chain dehydrogenase; Pro | 0.004 | |
| cd08953 | 436 | cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup | 0.004 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 261 bits (668), Expect = 3e-86
Identities = 112/284 (39%), Positives = 157/284 (55%), Gaps = 39/284 (13%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104
K++ +TG TGF+GK ++EKLLRSCP + IYLL+R K G+ +ERL + +D+LF R R
Sbjct: 1 KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRN 60
Query: 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVC 164
P F SK+ + GD S P LGLS+ D TL+++VNI+ H AATV FDE + A+ INV
Sbjct: 61 LNPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATVTFDERLDEALSINVL 120
Query: 165 GVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELS 224
G +L+LA+ K LKAFVHVSTA+ + R+ I+E+ YP P E LI ++ D EL
Sbjct: 121 GTLRLLELAKRCKKLKAFVHVSTAYVNGDRQLIEEKVYPPPADPEKLIDILELMDDLELE 180
Query: 225 EMTPNRVH---------------------------------ISGT------GWIDNVYGP 245
TP + + T GWIDN GP
Sbjct: 181 RATPKLLGGHPNTYTFTKALAERLVLKERGNLPLVIVRPSIVGATLKEPFPGWIDNFNGP 240
Query: 246 IGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289
G+ + G+L T + N V D++PVD+V N++++ A G
Sbjct: 241 DGLFLAYGKGILRTMNADPNAVADIIPVDVVANALLAAAAYSGV 284
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 214 bits (546), Expect = 7e-69
Identities = 96/260 (36%), Positives = 136/260 (52%), Gaps = 43/260 (16%)
Query: 49 LTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRLFWRLRAEVP 107
LTG TGF+GK ++EKLLRS P +K IY LVR K G+ ERL + + LF RL+A
Sbjct: 1 LTGATGFLGKVLLEKLLRSTPEVK-IYCLVRAKDGESALERLRQELLKYGLFDRLKA--- 56
Query: 108 DFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQ 167
++ VAGD S P LGLS+ D L ++V+++ H AATV F E NV G +
Sbjct: 57 --LERIIPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFVEPYSDLRATNVLGTR 114
Query: 168 AMLQLAREMKDLKAFVHVSTAFTHCPRE-RIDEEFYPV-----------PLKY------- 208
+L+LA++MK F HVSTA+ + R ++E+ Y + P Y
Sbjct: 115 EVLRLAKQMK-KLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWLA 173
Query: 209 ENLIQLISETGDEELSEMTPNRVH----ISG---TGWIDNVY-GPIGMLVGIATGVLHTH 260
E L++ E + P ++ I+G TGWI+ GP G+L G GVL
Sbjct: 174 EQLVR--------EAAGGLPVVIYRPSIITGESRTGWINGDDFGPRGLLGGAGLGVLPDI 225
Query: 261 LINLNTVTDMVPVDLVVNSM 280
L + + D+VPVD V N++
Sbjct: 226 LGDPDARLDLVPVDYVANAI 245
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 7e-28
Identities = 60/157 (38%), Positives = 92/157 (58%), Gaps = 7/157 (4%)
Query: 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRL 98
+F +KTI +TG TGF+ K VEK+LR P++K +YLL+R K +RL D + L
Sbjct: 7 QFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDL 66
Query: 99 FWRLRAEV-PDFRS----KVSAVAGDCSLPGLGLSETD-RATLVKQVNIVFHGAATVRFD 152
F LR ++ + S KV+ V GD S LG+ +++ R + K+++IV + AAT FD
Sbjct: 67 FKVLREKLGENLNSLISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFD 126
Query: 153 EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAF 189
E +A+ IN G +L A++ +K +HVSTA+
Sbjct: 127 ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY 163
|
Length = 491 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 2e-25
Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 29/250 (11%)
Query: 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEV 106
+F+TGGTGF+G+ +V++LL + + +LVR + + ER++ E
Sbjct: 1 VFVTGGTGFLGRHLVKRLLEN---GFKVLVLVRSESLGEAHERIE-------------EA 44
Query: 107 PDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGV 166
+V + GD + P LGLS L +V+ V H AA+ F + A + N+ G
Sbjct: 45 GLEADRVRVLEGDLTQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGT 104
Query: 167 QAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEE--FYPVP--------LKYENLIQLIS 216
+ +L+LA D++ F +VSTA+ RE E P K E + +
Sbjct: 105 EHVLELAAR-LDIQRFHYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKAEAEQLVRA 163
Query: 217 ETGDEELSEMTPN-RVHISGTGWIDNVYGPIGMLVGIATGVLHTHLI-NLNTVTDMVPVD 274
L+ P+ V S TG I+ + G +L +A + N ++VPVD
Sbjct: 164 AATQIPLTVYRPSIVVGDSKTGRIEKIDGLYELLNLLAKLGRWLPMPGNKGARLNLVPVD 223
Query: 275 LVVNSMISIA 284
V ++++ ++
Sbjct: 224 YVADAIVYLS 233
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 98.5 bits (246), Expect = 5e-24
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRLFWRLRA 104
T+ LTG TGF+G ++ +LL+ ++ IY LVR K + ERL D + E L
Sbjct: 1 TVLLTGATGFLGAYLLRELLK-RKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDEL 59
Query: 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKI 161
S++ V GD S P LGLS+ D L ++V+++ H A V + E +K
Sbjct: 60 ----ELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANVNWVYPYEELK---PA 112
Query: 162 NVCGVQAMLQLAREMKDLKAFVHVSTAFT 190
NV G + +L+LA K LK VST
Sbjct: 113 NVLGTKELLKLAATGK-LKPLHFVSTLSV 140
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Score = 97.6 bits (243), Expect = 1e-22
Identities = 58/173 (33%), Positives = 94/173 (54%), Gaps = 7/173 (4%)
Query: 35 GTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAI 93
G + EF R K +TG TGF+ K ++EK+LR+ P + IYLL++ K + ERL + +
Sbjct: 110 GIGIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEV 169
Query: 94 FEDRLFWRLR-AEVPDFRS----KVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAAT 148
+ LF L+ ++S K+ V G+ LGL + K+V+++ + AA
Sbjct: 170 IDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAAN 229
Query: 149 VRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRE-RIDEE 200
FDE +A+ IN G ++ A++ K LK F+ VSTA+ + R+ RI E+
Sbjct: 230 TTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEK 282
|
Length = 605 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 89.8 bits (223), Expect = 2e-20
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104
+ + LTG TGF+G ++ +LL K + LVR + + RL+ F+ W +
Sbjct: 1 RNVLLTGATGFLGAYLLLELLDR-SDAK-VICLVRAQSDEAALARLEKTFDLYRHWDELS 58
Query: 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVC 164
+V VAGD + P LGLSE L + V+++ H AA V NV
Sbjct: 59 A-----DRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVL 113
Query: 165 GVQAMLQLAREMKDLKAFVHVST 187
G +L+LA K K +VS+
Sbjct: 114 GTAEVLRLAATGK-PKPLHYVSS 135
|
Length = 382 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 87.9 bits (218), Expect = 1e-19
Identities = 57/192 (29%), Positives = 84/192 (43%), Gaps = 27/192 (14%)
Query: 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAE 105
T+ LTG TGF+G ++E+LLR K + LVR + ERL +RL E
Sbjct: 1 TVLLTGATGFLGAYLLEELLRRSTQAK-VICLVRAASEEHAMERLREALRS---YRLWHE 56
Query: 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKIN 162
R ++ VAGD S P LGLS+ + L + V+ + H A V + ++ A N
Sbjct: 57 DLA-RERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRGA---N 112
Query: 163 VCGVQAMLQLAREMKDLKAFVHVST----AFTHCPRERIDEEFYPVPL---------KY- 208
V G + +L+LA K +VST A D+ P K+
Sbjct: 113 VLGTREVLRLA-ASGRAKPLHYVSTISVGAAIDLSTVTEDDATVTPPPGLAGGYAQSKWV 171
Query: 209 -ENLIQLISETG 219
E L++ S+ G
Sbjct: 172 AELLVREASDRG 183
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 78.8 bits (195), Expect = 2e-16
Identities = 75/271 (27%), Positives = 121/271 (44%), Gaps = 50/271 (18%)
Query: 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAE 105
F+TGGTGF+G+ +V +LL +++LVR + RL+A+ W
Sbjct: 2 RYFVTGGTGFIGRRLVSRLLDRRREAT-VHVLVRRQS----LSRLEALAAY---WGA--- 50
Query: 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAAT--VRFDEHIKMAVKINV 163
+V + GD + PGLGLSE D A L ++ V H AA + DE + A NV
Sbjct: 51 -----DRVVPLVGDLTEPGLGLSEADIAELGD-IDHVVHLAAIYDLTADEEAQRAA--NV 102
Query: 164 CGVQAMLQLAREMKDLKAFVHVST---AFTHCPRERIDE----EFYPVPL---KYENLIQ 213
G + +++LA ++ F HVS+ A + R D+ + P P K+E +
Sbjct: 103 DGTRNVVELAERLQA-ATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAE-K 160
Query: 214 LISETGDEELSEMTPNRVHI-------SGTGWIDNVYGP---IGMLVGIATGVLHTHLIN 263
L+ E P RV+ S TG +D + GP +L +A ++
Sbjct: 161 LVREECG------LPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVG 214
Query: 264 LNT-VTDMVPVDLVVNSMISIAWSIGESGKV 293
+ T++VPVD V +++ + G G+
Sbjct: 215 PDGGRTNIVPVDYVADALDHLMHKDGRDGQT 245
|
Length = 657 |
| >gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 9e-11
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 44 DKTIFLTGGTGFMGKTVVEKLL-RSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRL 102
T+FLTG TGF+G ++ LL R ++ VR K + ERL W
Sbjct: 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDE 1030
Query: 103 RAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATV 149
+ S++ V GD S GLS+ + L +V+++ H A V
Sbjct: 1031 E-----WASRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALV 1072
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 5e-09
Identities = 38/160 (23%), Positives = 56/160 (35%), Gaps = 34/160 (21%)
Query: 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEV 106
I +TG TGF+G +V LL + LVR + + ++
Sbjct: 1 ILVTGATGFLGSNLVRALLAQG---YRVRALVRS------GSDAVLLDGLPVEVV-EGDL 50
Query: 107 PDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCG 165
D S +A+ G + VFH AA + K + NV G
Sbjct: 51 TDAASLAAAMKG--------------------CDRVFHLAAFTSLWAKDRKELYRTNVEG 90
Query: 166 VQAMLQLAREMKDLKAFVHVST--AFTHCPRERIDEEFYP 203
+ +L A E ++ VH S+ A P RIDE
Sbjct: 91 TRNVLDAALE-AGVRRVVHTSSIAALGGPPDGRIDETTPW 129
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 8e-08
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 29/150 (19%)
Query: 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLR 103
KTI +TGG G +G +V ++L+ P ++ D E + + E R R
Sbjct: 2 GKTILVTGGAGSIGSELVRQILKFGPKKLIVF---------DRDE--NKLHELVRELRSR 50
Query: 104 AEVPDFRSKVSAVAGDCSLPGLGLSETDRATLV---KQVNIVFHGAAT--VRFDEHIKM- 157
R + GD + + +R + +IVFH AA V E
Sbjct: 51 FPHDKLRF----IIGD-------VRDKERLRRAFKERGPDIVFHAAALKHVPSMEDNPEE 99
Query: 158 AVKINVCGVQAMLQLAREMKDLKAFVHVST 187
A+K NV G + ++ A E ++ FV +ST
Sbjct: 100 AIKTNVLGTKNVIDAAIENG-VEKFVCIST 128
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 33/159 (20%)
Query: 37 PMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK-DIQERLDAIFE 95
+ KT+ +TGG G +G + ++L+ P K I L R + I L F
Sbjct: 243 LIGAMLTGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRDEYKLYLIDMELREKFP 300
Query: 96 DRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHI 155
+ +V D A+ G +V+IVFH AA +H+
Sbjct: 301 ELKLRFYIGDVRDRDRVERAMEG------------------HKVDIVFHAAAL----KHV 338
Query: 156 KM-------AVKINVCGVQAMLQLAREMKDLKAFVHVST 187
+ A+K NV G + + + A + +K FV +ST
Sbjct: 339 PLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLIST 376
|
Length = 588 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 6e-05
Identities = 43/171 (25%), Positives = 60/171 (35%), Gaps = 46/171 (26%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWR-LR 103
+ +TG TGF+G VV LL ++ +LVRP DR L
Sbjct: 1 MKVLVTGATGFVGSAVVRLLLEQGEEVR---VLVRPT-------------SDRRNLEGLD 44
Query: 104 AEVPDFRSKVSAVAGDCSLPGLGLSETDRATL---VKQVNIVFHGAATVRF---DEHIKM 157
E+ V GD D A+L V +FH AA R D
Sbjct: 45 VEI---------VEGDL---------RDPASLRKAVAGCRALFHVAADYRLWAPDPEEMY 86
Query: 158 AVKINVCGVQAMLQLAREMKDLKAFVHVST--AFTHCPRERIDEEFYPVPL 206
A NV G + +L+ A E ++ V+ S+ +E P L
Sbjct: 87 A--ANVEGTRNLLRAALE-AGVERVVYTSSVATLGVRGDGTPADETTPSSL 134
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 7e-05
Identities = 43/171 (25%), Positives = 59/171 (34%), Gaps = 46/171 (26%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104
I +TGG GF+G +VE+LL G D+ R RLR
Sbjct: 1 MRILVTGGAGFIGSHLVERLL---------------AAGHDV----------RGLDRLRD 35
Query: 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVN----IVFHGAATVRF----DEHIK 156
+ S V V D TDR + + V H AA
Sbjct: 36 GLDPLLSGVEFVVLD---------LTDRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPA 86
Query: 157 MAVKINVCGVQAMLQLAREMKDLKAFVHVSTA---FTHCPRERIDEEFYPV 204
+ +NV G +L+ AR +K FV S+ + P IDE+ P
Sbjct: 87 EFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGDPPPLPIDEDLGPP 136
|
Length = 314 |
| >gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 8e-05
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 237 GWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMI 281
GWI+ + ++VG G L L + N+V D++P D+VVN+MI
Sbjct: 274 GWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMI 318
|
Length = 491 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 1e-04
Identities = 34/156 (21%), Positives = 55/156 (35%), Gaps = 36/156 (23%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104
T+ +TGGTG +G + L +H+ L+ R E L A
Sbjct: 1 GTVLITGGTGGLGLALARWLAAEGA--RHLVLVSRRGPAPGAAE-------------LVA 45
Query: 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVN-------IVFHGAATVR------- 150
E+ ++V+ A D + A L+ + V H A +
Sbjct: 46 ELEALGAEVTVAACDVA------DRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEEL 99
Query: 151 FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVS 186
E + + V G + +L R++ DL AFV S
Sbjct: 100 TPERFERVLAPKVTGAWNLHELTRDL-DLGAFVLFS 134
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 1e-04
Identities = 35/144 (24%), Positives = 51/144 (35%), Gaps = 29/144 (20%)
Query: 49 LTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDI---QERLDAIFEDRLFWRLRAE 105
+TG +GF+ VVE+LL + VR LDA A+
Sbjct: 3 VTGASGFVASHVVEQLLE---RGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELA--VAD 57
Query: 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVC 164
+ D +S + G C+ VFH A V F + +K +
Sbjct: 58 LTDEQSFDEVIKG-CAG-------------------VFHVATPVSFSSKDPNEVIKPAIG 97
Query: 165 GVQAMLQLAREMKDLKAFVHVSTA 188
G L+ A K +K FV S+A
Sbjct: 98 GTLNALKAAAAAKSVKRFVLTSSA 121
|
This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295 |
| >gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein | Back alignment and domain information |
|---|
Score = 40.9 bits (97), Expect = 4e-04
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 43/154 (27%)
Query: 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR-PKKGKDIQERLDAIFEDRLFWRLRAE 105
+ +TGG G +G + ++L+ P K I L R K +I++ L + D +LR
Sbjct: 1 VLVTGGGGSIGSELCRQILKFNP--KKIILFSRDEFKLYEIRQELRQEYND---PKLRFF 55
Query: 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVK-----QVNIVFHGAATVRFDEHIKM--- 157
+ D R DR L + V+ VFH AA +H+ +
Sbjct: 56 IGDVR--------------------DRERLERAMEQHGVDTVFHAAAL----KHVPLVEY 91
Query: 158 ----AVKINVCGVQAMLQLAREMKDLKAFVHVST 187
A+K NV G + + + A E ++ FV +ST
Sbjct: 92 NPMEAIKTNVLGTENVAEAAIENG-VEKFVLIST 124
|
This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280 |
| >gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 5e-04
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 49 LTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPD 108
+TGG GF+G+ ++ LL LK I + LD F L E
Sbjct: 4 VTGGGGFLGQHIIRLLLERKEELKEIRV-------------LDKAFGPELIEHF--EKSQ 48
Query: 109 FRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFD--EHIKMAVKINVCGV 166
++ V+ + GD LS RA + V++V H AA V + + ++NV G
Sbjct: 49 GKTYVTDIEGDI----KDLSFLFRA--CQGVSVVIHTAAIVDVFGPPNYEELEEVNVNGT 102
Query: 167 QAMLQLAREMKDLKAFVHVST 187
QA+L+ + ++K V+ S+
Sbjct: 103 QAVLEACVQ-NNVKRLVYTSS 122
|
This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 6e-04
Identities = 37/165 (22%), Positives = 58/165 (35%), Gaps = 35/165 (21%)
Query: 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEV 106
I +TGGTGF+G +V +LL+ + +L R ++ E R+R
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQ---EGYEVIVLGRRRR-----------SESLNTGRIRFHE 46
Query: 107 PDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAV---KINV 163
D +R Q + V H AA + + NV
Sbjct: 47 GDLTDP---------------DALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANV 91
Query: 164 CGVQAMLQLAREMKDLKAFVHVSTA--FTHCPRERIDEEFYPVPL 206
G +L+ AR +K FV S++ + I E+ PL
Sbjct: 92 LGTLRLLEAARRA-GVKRFVFASSSEVYGDVADPPITEDTPLGPL 135
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.001
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 30/136 (22%)
Query: 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR-PKKGKDIQERLDAIFEDRLFW 100
++DK + +TGGTG G V+ + L + +K I + R KK D++++ + +L +
Sbjct: 2 FKDKILLITGGTGSFGNAVLRRFLDT--DIKEIRIFSRDEKKQDDMRKKYN---NSKLKF 56
Query: 101 RLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDE---HIKM 157
+ +V D+RS ++A G V+ ++H AA + H
Sbjct: 57 YI-GDVRDYRSILNATRG--------------------VDFIYHAAALKQVPSCEFHPME 95
Query: 158 AVKINVCGVQAMLQLA 173
AVK NV G + +L+ A
Sbjct: 96 AVKTNVLGTENVLEAA 111
|
The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.001
Identities = 40/170 (23%), Positives = 62/170 (36%), Gaps = 34/170 (20%)
Query: 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAE 105
+ +TG GF+G + E+LLR ++ + I+ W L
Sbjct: 1 NVLVTGADGFIGSHLTERLLREGHEVRAL-----------------DIYNSFNSWGL--L 41
Query: 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMA---VKIN 162
+ ++GD LVK+ ++VFH AA + V+ N
Sbjct: 42 DNAVHDRFHFISGDVRDASEVEY------LVKKCDVVFHLAALIAIPYSYTAPLSYVETN 95
Query: 163 VCGVQAMLQLAREMKDLKAFVHVSTA--FTHCPRERIDEEFYPVPLKYEN 210
V G +L+ A K VH ST+ + IDE+ PL Y N
Sbjct: 96 VFGTLNVLEAACV-LYRKRVVHTSTSEVYGTAQDVPIDEDH---PLLYIN 141
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.002
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 36/144 (25%)
Query: 47 IFLTGGTGFMGKTVVEKLLRSCPHLKH-IYLLVRPKKGKDIQERLDAIFEDRLFWRLRAE 105
I + G TGF+G+ + +LL H + LLVR K RL ++
Sbjct: 1 ILILGATGFIGRALARELLE----QGHEVTLLVRNTK------RLSKEDQEP-------- 42
Query: 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCG 165
V+ V GD + V+ V++V H A R +++V G
Sbjct: 43 -------VAVVEGDL------RDLDSLSDAVQGVDVVIHLAGAPRDTRDF---CEVDVEG 86
Query: 166 VQAMLQLAREMKDLKAFVHVSTAF 189
+ +L+ A+E +K F+ +S+
Sbjct: 87 TRNVLEAAKEAG-VKHFIFISSLG 109
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 0.002
Identities = 35/154 (22%), Positives = 51/154 (33%), Gaps = 39/154 (25%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104
I +TGG GF+G V +L P + L D+L
Sbjct: 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNL-------------------DKL------ 35
Query: 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRAT------LVK--QVNIVFHGAATVRFDEHIK 156
+ + +A P + D L K Q + V H AA D I
Sbjct: 36 ---TYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVHFAAESHVDRSID 92
Query: 157 MA---VKINVCGVQAMLQLAREMKDLKAFVHVST 187
++ NV G +L+ AR+ F H+ST
Sbjct: 93 GPAPFIQTNVVGTYTLLEAARKYWGKFRFHHIST 126
|
Length = 340 |
| >gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.004
Identities = 34/145 (23%), Positives = 58/145 (40%), Gaps = 39/145 (26%)
Query: 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLR 103
DK + LTG +G +G+ + E L + L LLV G++ E+L+ L
Sbjct: 5 DKRVLLTGASGGIGQALAEALAAAGARL----LLV----GRN-AEKLE---------ALA 46
Query: 104 AEVPDFRSKVSAVAGDCSLPGLGLSE-----TDRATLVKQVNIVFHGAATVRF------- 151
A +P + + V D L RA + +N++ + A F
Sbjct: 47 ARLP-YPGRHRWVVAD-----LTSEAGREAVLARAREMGGINVLINNAGVNHFALLEDQD 100
Query: 152 DEHIKMAVKINVCGVQAMLQLAREM 176
E I+ + +N + A +QL R +
Sbjct: 101 PEAIERLLALN---LTAPMQLTRAL 122
|
Length = 263 |
| >gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.004
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 44/165 (26%)
Query: 42 YRDKTIFL-TGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFW 100
+ ++L TGG G +G+ + L R + + LL R + + + +
Sbjct: 202 LKPGGVYLVTGGAGGIGRALARALARR--YGARLVLLGRSPLPPEEEWKAQTLAA----- 254
Query: 101 RLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRA---TLVKQV-------NIVFHGAATVR 150
L A V ++ D TD A L+++V + V H A +R
Sbjct: 255 -LEALGAR----VLYISAD---------VTDAAAVRRLLEKVRERYGAIDGVIHAAGVLR 300
Query: 151 FDEHIKM---------AVKINVCGVQAMLQLAREMKDLKAFVHVS 186
+ A K++ G+ + Q + L FV S
Sbjct: 301 DALLAQKTAEDFEAVLAPKVD--GLLNLAQALADE-PLDFFVLFS 342
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 303 | |||
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.97 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.97 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.97 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.96 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.96 | |
| KOG1221|consensus | 467 | 99.96 | ||
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.96 | |
| KOG1502|consensus | 327 | 99.96 | ||
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.96 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.95 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.95 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.94 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.94 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.94 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.94 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.94 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.94 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.94 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.93 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.93 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.93 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.93 | |
| KOG1429|consensus | 350 | 99.93 | ||
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.93 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.93 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.93 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.93 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.92 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.92 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.92 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.92 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.92 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.92 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.91 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.91 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.91 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.91 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.91 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.91 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.91 | |
| KOG1371|consensus | 343 | 99.9 | ||
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.9 | |
| KOG0747|consensus | 331 | 99.9 | ||
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.9 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.9 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.9 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.9 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.89 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.89 | |
| KOG1430|consensus | 361 | 99.88 | ||
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.88 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.88 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.87 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.87 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.87 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.87 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.86 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.86 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.85 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.83 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.83 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.83 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.82 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.82 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.81 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.8 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.79 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.78 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.77 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.77 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.76 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.76 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.76 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.76 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.75 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.75 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.75 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.74 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.74 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.74 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.74 | |
| KOG1372|consensus | 376 | 99.73 | ||
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.73 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.73 | |
| KOG1431|consensus | 315 | 99.73 | ||
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.73 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.73 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.73 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.72 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.72 | |
| KOG1205|consensus | 282 | 99.72 | ||
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.72 | |
| KOG2865|consensus | 391 | 99.72 | ||
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.72 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.72 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.72 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.72 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.71 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.71 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.71 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.7 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.7 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.7 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.7 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.7 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.7 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.69 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.69 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.69 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.68 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.68 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.68 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.68 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.68 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.67 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.67 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.67 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.67 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.67 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.67 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.67 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.67 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.67 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.66 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.66 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.66 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.65 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.65 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.65 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.65 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.65 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.64 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.64 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.64 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.63 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.63 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.63 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.62 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.62 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.62 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.62 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.62 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.61 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.61 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.61 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.61 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.61 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.61 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.6 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.6 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.6 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.6 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.6 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.6 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.59 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.59 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.59 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.59 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.59 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.59 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.58 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.58 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.57 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.57 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.57 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.57 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.57 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.57 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.56 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.56 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.56 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.55 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.55 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.55 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.54 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.54 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.54 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.54 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.53 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.53 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.52 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.51 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.51 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.5 | |
| KOG1611|consensus | 249 | 99.49 | ||
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.48 | |
| KOG4169|consensus | 261 | 99.47 | ||
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.47 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.47 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.47 | |
| KOG1201|consensus | 300 | 99.46 | ||
| KOG1208|consensus | 314 | 99.45 | ||
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.42 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.4 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.37 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.37 | |
| KOG1200|consensus | 256 | 99.35 | ||
| KOG0725|consensus | 270 | 99.35 | ||
| KOG1610|consensus | 322 | 99.33 | ||
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.31 | |
| KOG2774|consensus | 366 | 99.31 | ||
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.3 | |
| KOG1209|consensus | 289 | 99.29 | ||
| KOG4039|consensus | 238 | 99.28 | ||
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.26 | |
| KOG1203|consensus | 411 | 99.24 | ||
| KOG4288|consensus | 283 | 99.2 | ||
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.16 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.14 | |
| KOG1207|consensus | 245 | 99.12 | ||
| KOG1210|consensus | 331 | 99.12 | ||
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.11 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.07 | |
| KOG1014|consensus | 312 | 98.97 | ||
| KOG3019|consensus | 315 | 98.81 | ||
| PRK06720 | 169 | hypothetical protein; Provisional | 98.78 | |
| KOG1478|consensus | 341 | 98.76 | ||
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.71 | |
| KOG1204|consensus | 253 | 98.64 | ||
| PLN00106 | 323 | malate dehydrogenase | 98.59 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.56 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.56 | |
| KOG1199|consensus | 260 | 98.49 | ||
| PRK09620 | 229 | hypothetical protein; Provisional | 98.42 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.37 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 98.27 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.25 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 98.18 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 98.1 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.96 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.96 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.96 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.95 | |
| KOG2733|consensus | 423 | 97.95 | ||
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.82 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.82 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.8 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.78 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 97.76 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.58 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.5 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 97.48 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.45 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 97.37 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.34 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.32 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 97.32 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 97.29 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 97.26 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 97.24 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.23 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.23 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.2 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.19 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.13 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 97.07 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.04 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 97.03 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.95 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 96.95 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 96.93 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 96.91 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.89 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 96.87 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.87 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 96.81 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.75 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.74 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 96.71 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 96.66 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 96.59 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.58 | |
| KOG1494|consensus | 345 | 96.58 | ||
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 96.56 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 96.55 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.55 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.5 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.5 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 96.49 | |
| PRK08223 | 287 | hypothetical protein; Validated | 96.49 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 96.48 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 96.46 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 96.45 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.44 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.28 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 96.27 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 96.25 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 96.24 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.22 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.21 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.2 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 96.19 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 96.18 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 96.14 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 96.13 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 96.13 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 96.1 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.09 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.09 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 96.08 | |
| PRK07411 | 390 | hypothetical protein; Validated | 96.08 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.07 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 96.06 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.05 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 96.04 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 96.0 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.0 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 95.98 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 95.88 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 95.86 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 95.86 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.82 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 95.78 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 95.76 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 95.75 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 95.71 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 95.71 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 95.69 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 95.64 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 95.56 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.52 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 95.47 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 95.47 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 95.4 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 95.35 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 95.33 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 95.3 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 95.05 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 95.05 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 95.04 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 95.03 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 94.99 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.96 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 94.82 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 94.81 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 94.8 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 94.67 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 94.64 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 94.63 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.55 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 94.52 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 94.5 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 94.44 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.42 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 94.41 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 94.4 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 94.37 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 94.37 | |
| KOG1198|consensus | 347 | 94.36 | ||
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 94.33 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 94.31 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.29 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.27 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 94.27 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 94.25 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 94.25 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 94.24 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 94.24 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 94.19 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.18 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 94.17 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 94.12 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.12 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.1 | |
| cd01079 | 197 | NAD_bind_m-THF_DH NAD binding domain of methylene- | 93.98 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.98 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 93.97 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 93.94 | |
| PRK06487 | 317 | glycerate dehydrogenase; Provisional | 93.91 | |
| PRK14186 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.89 | |
| PLN02928 | 347 | oxidoreductase family protein | 93.88 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.87 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 93.87 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 93.85 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.81 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 93.81 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.8 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 93.8 | |
| PRK14169 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.74 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.7 | |
| PRK14166 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.66 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 93.64 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 93.63 | |
| PRK14187 | 294 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.63 | |
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.58 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 93.57 | |
| PRK14170 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.53 | |
| PRK06932 | 314 | glycerate dehydrogenase; Provisional | 93.5 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 93.49 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 93.43 | |
| COG1052 | 324 | LdhA Lactate dehydrogenase and related dehydrogena | 93.38 | |
| PRK14183 | 281 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.37 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.35 | |
| PRK14171 | 288 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.26 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 93.24 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 93.2 | |
| TIGR03693 | 637 | ocin_ThiF_like putative thiazole-containing bacter | 93.04 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 92.98 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 92.92 | |
| PRK14182 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 92.86 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 92.86 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 92.73 | |
| PRK14193 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 92.73 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 92.72 | |
| KOG0023|consensus | 360 | 92.65 | ||
| COG1023 | 300 | Gnd Predicted 6-phosphogluconate dehydrogenase [Ca | 92.65 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 92.63 | |
| PLN02616 | 364 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 92.63 | |
| cd01488 | 291 | Uba3_RUB Ubiquitin activating enzyme (E1) subunit | 92.59 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 92.56 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 92.55 | |
| PLN02306 | 386 | hydroxypyruvate reductase | 92.48 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 92.44 | |
| COG0190 | 283 | FolD 5,10-methylene-tetrahydrofolate dehydrogenase | 92.34 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 92.29 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 92.28 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 92.28 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 92.25 | |
| PLN02897 | 345 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 92.25 | |
| PRK07634 | 245 | pyrroline-5-carboxylate reductase; Reviewed | 92.23 | |
| PLN02516 | 299 | methylenetetrahydrofolate dehydrogenase (NADP+) | 92.23 | |
| PRK15409 | 323 | bifunctional glyoxylate/hydroxypyruvate reductase | 92.22 |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=243.47 Aligned_cols=251 Identities=32% Similarity=0.493 Sum_probs=191.2
Q ss_pred ccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHH-HHHHhHHHhhhhccCcCc-----C
Q psy17679 37 PMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLD-AIFEDRLFWRLRAEVPDF-----R 110 (303)
Q Consensus 37 ~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~-~l~~~~~~~~~~~~~~~~-----~ 110 (303)
.+.+..++|+|||||||||+|++++++|++.+.++.+|+++.|+.+...+.+++. ++....++..+....+.. .
T Consensus 4 ~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~ 83 (491)
T PLN02996 4 SCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLIS 83 (491)
T ss_pred cHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhh
Confidence 3556788999999999999999999999998778888999999988888888874 566655555444322221 2
Q ss_pred CceEEEEecCCCCCCCCCHHH-HHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy17679 111 SKVSAVAGDCSLPGLGLSETD-RATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAF 189 (303)
Q Consensus 111 ~~v~~~~~Dl~d~~~~~~~~~-~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~ 189 (303)
.+++++.||++++.+|++..+ +..+++++|+|||+|+..++..++...+++|+.++.+++++|...+++++|||+||++
T Consensus 84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~ 163 (491)
T PLN02996 84 EKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY 163 (491)
T ss_pred cCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeE
Confidence 689999999999999997766 5677889999999999988877788899999999999999999865688999999997
Q ss_pred ccCCCC-ccccCCCCC-------------------------------------------------CCChhhHHHHHHHHH
Q psy17679 190 THCPRE-RIDEEFYPV-------------------------------------------------PLKYENLIQLISETG 219 (303)
Q Consensus 190 ~~~~~~-~~~E~~~~~-------------------------------------------------~~~~~~~~~~~k~~~ 219 (303)
+.+... .+.|..... ...+.+.|..+|.++
T Consensus 164 vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~a 243 (491)
T PLN02996 164 VCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMG 243 (491)
T ss_pred EecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHH
Confidence 654321 222221110 011224588999999
Q ss_pred HHHHHhhCcCCc-EEeeccee------------cCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 220 DEELSEMTPNRV-HISGTGWI------------DNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 220 E~~~~~~~~~~~-~ii~pg~~------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
|.++..+..... .++||+.+ .+..++..++..+..|.....++++++.+|++||+|+|++++.++.+
T Consensus 244 E~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~ 323 (491)
T PLN02996 244 EMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAA 323 (491)
T ss_pred HHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHH
Confidence 999988765433 67776433 22233344555556666667788999999999999999999999886
Q ss_pred c
Q psy17679 287 I 287 (303)
Q Consensus 287 ~ 287 (303)
.
T Consensus 324 ~ 324 (491)
T PLN02996 324 H 324 (491)
T ss_pred h
Confidence 4
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=212.88 Aligned_cols=222 Identities=22% Similarity=0.204 Sum_probs=176.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|++|||||.||||+++++.++++..+ .+|++++.=+.. ...+.+..+.. .++..|+++|++|.+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~DkLTYA-gn~~~l~~~~~--------------~~~~~fv~~DI~D~~ 64 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDKLTYA-GNLENLADVED--------------SPRYRFVQGDICDRE 64 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCC-ceEEEEeccccc-CCHHHHHhhhc--------------CCCceEEeccccCHH
Confidence 57999999999999999999999554 457777765432 22344433322 279999999999977
Q ss_pred CCCCHHHHHHHhc--cccEEEEcceeccccc---cHHHHHhhhHHHHHHHHHHHHhcCCC-ceEEEEeCC--cccCCCC-
Q psy17679 125 LGLSETDRATLVK--QVNIVFHGAATVRFDE---HIKMAVKINVCGVQAMLQLAREMKDL-KAFVHVSTA--FTHCPRE- 195 (303)
Q Consensus 125 ~~~~~~~~~~~~~--~~dvVi~~a~~~~~~~---~~~~~~~~N~~~~~~ll~~a~~~~~~-~r~i~iSS~--~~~~~~~- 195 (303)
.+..+++ ++|+|+|+|+..+.+. .++.++++|+.|+..||+++++. .. -||+|+||. ||.....
T Consensus 65 ------~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~-~~~frf~HISTDEVYG~l~~~~ 137 (340)
T COG1088 65 ------LVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKY-WGKFRFHHISTDEVYGDLGLDD 137 (340)
T ss_pred ------HHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHh-cccceEEEeccccccccccCCC
Confidence 6888888 6999999999987654 45789999999999999999998 54 599999999 6654433
Q ss_pred -ccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH--------HHHHHHhhhhhhccCC
Q psy17679 196 -RIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG--------MLVGIATGVLHTHLIN 263 (303)
Q Consensus 196 -~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~--------~~~~~~~~~~~~~~~~ 263 (303)
.++|.++..|.+||+..| ..++.+++++...++ +|. ++.|-|||.. ++.+.+.|++.+++|+
T Consensus 138 ~~FtE~tp~~PsSPYSASK---AasD~lVray~~TYglp~~It---rcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGd 211 (340)
T COG1088 138 DAFTETTPYNPSSPYSASK---AASDLLVRAYVRTYGLPATIT---RCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGD 211 (340)
T ss_pred CCcccCCCCCCCCCcchhh---hhHHHHHHHHHHHcCCceEEe---cCCCCcCCCcCchhhhHHHHHHHHcCCCCceecC
Confidence 688888888888777554 558899999988888 444 4478899863 6677788899999999
Q ss_pred CCccccceehhHHHHHHHHHHhhcccCCcchhh
Q psy17679 264 LNTVTDMVPVDLVVNSMISIAWSIGESGKVEKA 296 (303)
Q Consensus 264 ~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~~~~ 296 (303)
|.+.+||+||.|-|+|+..++.+... +.++++
T Consensus 212 G~~iRDWl~VeDh~~ai~~Vl~kg~~-GE~YNI 243 (340)
T COG1088 212 GLQIRDWLYVEDHCRAIDLVLTKGKI-GETYNI 243 (340)
T ss_pred CcceeeeEEeHhHHHHHHHHHhcCcC-CceEEe
Confidence 99999999999999999999987654 554443
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=214.33 Aligned_cols=209 Identities=20% Similarity=0.215 Sum_probs=157.7
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+||||||+||||+|.+.+|++.|++ |.+++.-..+. .+.+.. ..+.++++|+.|..
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~---vvV~DNL~~g~--~~~v~~------------------~~~~f~~gDi~D~~ 57 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHE---VVVLDNLSNGH--KIALLK------------------LQFKFYEGDLLDRA 57 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCe---EEEEecCCCCC--HHHhhh------------------ccCceEEeccccHH
Confidence 58999999999999999999999999 55555432211 111100 11679999999987
Q ss_pred CCCCHHHHHHHhc--cccEEEEcceeccccc---cHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC--cccCCCCcc
Q psy17679 125 LGLSETDRATLVK--QVNIVFHGAATVRFDE---HIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA--FTHCPRERI 197 (303)
Q Consensus 125 ~~~~~~~~~~~~~--~~dvVi~~a~~~~~~~---~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~--~~~~~~~~~ 197 (303)
.+.++++ ++|.|||+||.....+ .+..+++.|+.|+..|++++.+. ++++|||.||+ ||.+...|+
T Consensus 58 ------~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSStAavYG~p~~~PI 130 (329)
T COG1087 58 ------LLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSSTAAVYGEPTTSPI 130 (329)
T ss_pred ------HHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEecchhhcCCCCCccc
Confidence 5888887 8999999999876544 45678999999999999999999 89999999999 777777899
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH----------------HHHHHHHhhhhh
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI----------------GMLVGIATGVLH 258 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~----------------~~~~~~~~~~~~ 258 (303)
+|+....|.+||+ .+|.+.|++++.+...+. .++| ++|+-|.. ..+.+...|+..
T Consensus 131 ~E~~~~~p~NPYG---~sKlm~E~iL~d~~~a~~~~~v~LR---YFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~ 204 (329)
T COG1087 131 SETSPLAPINPYG---RSKLMSEEILRDAAKANPFKVVILR---YFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRD 204 (329)
T ss_pred CCCCCCCCCCcch---hHHHHHHHHHHHHHHhCCCcEEEEE---ecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCc
Confidence 9998777766665 677889999998876665 4444 34443311 133333444432
Q ss_pred --hccC------CCCccccceehhHHHHHHHHHHhhccc
Q psy17679 259 --THLI------NLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 259 --~~~~------~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.++| +|...||||||.|+|++++.+++.-..
T Consensus 205 ~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~ 243 (329)
T COG1087 205 KLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKE 243 (329)
T ss_pred eeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHh
Confidence 3444 578899999999999999999986654
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=232.32 Aligned_cols=246 Identities=31% Similarity=0.534 Sum_probs=195.3
Q ss_pred cccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHH-HHHHhHHHhhhhccCcCc-----CC
Q psy17679 38 MQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLD-AIFEDRLFWRLRAEVPDF-----RS 111 (303)
Q Consensus 38 ~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~-~l~~~~~~~~~~~~~~~~-----~~ 111 (303)
..++.++|+|||||||||+|.+|+++|++.+.++.+|++++|..+...+.+++. +++...++..+.+..+.. ..
T Consensus 113 I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~ 192 (605)
T PLN02503 113 IAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLS 192 (605)
T ss_pred hhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccc
Confidence 446788999999999999999999999998788888999999988888888884 677777777666543321 46
Q ss_pred ceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCccc
Q psy17679 112 KVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTH 191 (303)
Q Consensus 112 ~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~ 191 (303)
++.++.||++++.+|++.+....+.+++|+|||+|+...+..++...+++|+.++.+++++|...++.++|||+||+|+.
T Consensus 193 Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVy 272 (605)
T PLN02503 193 KLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVN 272 (605)
T ss_pred cEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceee
Confidence 89999999999999999988888888999999999998888888889999999999999999987567899999999877
Q ss_pred CCCC-ccccCCCCC-------------------C-------------------------------------CChhhHHHH
Q psy17679 192 CPRE-RIDEEFYPV-------------------P-------------------------------------LKYENLIQL 214 (303)
Q Consensus 192 ~~~~-~~~E~~~~~-------------------~-------------------------------------~~~~~~~~~ 214 (303)
+... .+.|..+.. + ....+.|..
T Consensus 273 G~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~ 352 (605)
T PLN02503 273 GQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVF 352 (605)
T ss_pred cCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHH
Confidence 6542 455543320 0 011256888
Q ss_pred HHHHHHHHHHhhCcCCc-EEeec------------ceecC--ccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHH
Q psy17679 215 ISETGDEELSEMTPNRV-HISGT------------GWIDN--VYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNS 279 (303)
Q Consensus 215 ~k~~~E~~~~~~~~~~~-~ii~p------------g~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a 279 (303)
+|.++|+++........ .|+|| ||+.+ .++|..... ..|.....+++++...|+||||.+|++
T Consensus 353 TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~--g~G~lr~~~~~~~~~~DiVPVD~vvna 430 (605)
T PLN02503 353 TKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYY--GKGQLTGFLADPNGVLDVVPADMVVNA 430 (605)
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhhe--eccceeEEEeCCCeeEeEEeecHHHHH
Confidence 99999999998776554 67775 44455 344433322 366666678889999999999999999
Q ss_pred HHHHHh
Q psy17679 280 MISIAW 285 (303)
Q Consensus 280 i~~~~~ 285 (303)
++.++.
T Consensus 431 ~i~a~a 436 (605)
T PLN02503 431 TLAAMA 436 (605)
T ss_pred HHHHHH
Confidence 999854
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=219.55 Aligned_cols=227 Identities=32% Similarity=0.449 Sum_probs=145.4
Q ss_pred EeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHH-HHHhHHHhhhhccCcCcCCceEEEEecCCCCCCCC
Q psy17679 49 LTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDA-IFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGL 127 (303)
Q Consensus 49 ItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~-l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~ 127 (303)
|||||||+|++|+.+|++.+..+ +|+|++|+++...+.+++.+ +....++..... ....+++++.||++++.+|+
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~---~~~~ri~~v~GDl~~~~lGL 76 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDALKEYGLWDDLDK---EALSRIEVVEGDLSQPNLGL 76 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-H---HHTTTEEEEE--TTSGGGG-
T ss_pred CcCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhhcccccchhhhhh---hhhccEEEEeccccccccCC
Confidence 79999999999999999997644 79999999887777777743 333333332211 11379999999999999999
Q ss_pred CHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCC-cc-------cc
Q psy17679 128 SETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRE-RI-------DE 199 (303)
Q Consensus 128 ~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~-~~-------~E 199 (303)
+..++..+.+++|+|||+|+..++..++..++++|+.|+.++++.|... ..++|+|+||++...... .. .+
T Consensus 77 ~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~ 155 (249)
T PF07993_consen 77 SDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYISTAYVAGSRPGTIEEKVYPEEE 155 (249)
T ss_dssp -HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-S---EEEEEEGGGTTS-TTT--SSS-HHH-
T ss_pred ChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-cCcceEEeccccccCCCCCccccccccccc
Confidence 9999999999999999999999999999899999999999999999977 666999999976554332 22 12
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhhCcC-Cc--EEeecceecCc--cC--------hHHHHHHHHhhhhhhccCCCCc
Q psy17679 200 EFYPVPLKYENLIQLISETGDEELSEMTPN-RV--HISGTGWIDNV--YG--------PIGMLVGIATGVLHTHLINLNT 266 (303)
Q Consensus 200 ~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~-~~--~ii~pg~~~~~--~g--------~~~~~~~~~~~~~~~~~~~~~~ 266 (303)
.....+......|..+||.+|++++.+... .. .|+|||.+.+. -| +..+...+..+..+..++.++.
T Consensus 156 ~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 235 (249)
T PF07993_consen 156 DDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDA 235 (249)
T ss_dssp -EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---T
T ss_pred ccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCc
Confidence 222233445568999999999999998755 22 89999876431 11 1123333344444455556666
Q ss_pred cccceehhHHHHHH
Q psy17679 267 VTDMVPVDLVVNSM 280 (303)
Q Consensus 267 ~~~~i~v~D~a~ai 280 (303)
..++++||.+|++|
T Consensus 236 ~~d~vPVD~va~aI 249 (249)
T PF07993_consen 236 RLDLVPVDYVARAI 249 (249)
T ss_dssp T--EEEHHHHHHHH
T ss_pred eEeEECHHHHHhhC
Confidence 79999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=224.18 Aligned_cols=252 Identities=47% Similarity=0.785 Sum_probs=220.1
Q ss_pred CccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEE
Q psy17679 36 TPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSA 115 (303)
Q Consensus 36 ~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~ 115 (303)
+...++.++|+|||||||||+|..++++|+....++.+|+.+.|.+++.++++++..++...++..+....++...++..
T Consensus 4 ~~i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~p 83 (467)
T KOG1221|consen 4 SDIVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVP 83 (467)
T ss_pred ccHHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceeccee
Confidence 33567889999999999999999999999999768999999999999999999999999999999999998988999999
Q ss_pred EEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCC
Q psy17679 116 VAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRE 195 (303)
Q Consensus 116 ~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~ 195 (303)
+.||++++++|++.++...+.+++++|||+|+...+++.......+|+.|++++++.|++..+.+-++|+||+|......
T Consensus 84 i~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~ 163 (467)
T KOG1221|consen 84 IAGDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVG 163 (467)
T ss_pred ccccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccc
Confidence 99999999999999999988899999999999999999999999999999999999999997789999999999885444
Q ss_pred ccccCCCCCCC--C--------------------------hhhHHHHHHHHHHHHHHhhCcCCc-EEee-----------
Q psy17679 196 RIDEEFYPVPL--K--------------------------YENLIQLISETGDEELSEMTPNRV-HISG----------- 235 (303)
Q Consensus 196 ~~~E~~~~~~~--~--------------------------~~~~~~~~k~~~E~~~~~~~~~~~-~ii~----------- 235 (303)
.+.|..+..+. + ..+.|-.+|.++|+.+........ .|+|
T Consensus 164 ~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP 243 (467)
T KOG1221|consen 164 HIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEP 243 (467)
T ss_pred cccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCC
Confidence 44443332221 1 234466678999999999988877 5555
Q ss_pred -cceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 236 -TGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 236 -pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
|||+.|.+||..++....+|.....+.+++...|+|++|.++.+++.+...-
T Consensus 244 ~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~ 296 (467)
T KOG1221|consen 244 FPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQH 296 (467)
T ss_pred CCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHH
Confidence 7898999999999999999998888889999999999999999999776433
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-28 Score=221.80 Aligned_cols=220 Identities=19% Similarity=0.157 Sum_probs=160.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|||||||||+|++|++.|+++|++ |++++|...... ..+...... .. .....++.++.+|+.
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~---V~~~d~~~~~~~--~~~~~~~~~-----~~---~~~~~~~~~~~~Di~ 79 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQT---VIGLDNFSTGYQ--HNLDDVRTS-----VS---EEQWSRFIFIQGDIR 79 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCE---EEEEeCCCCcch--hhhhhhhhc-----cc---cccCCceEEEEccCC
Confidence 56689999999999999999999999987 889988653211 111111100 00 001146889999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC--cccCCCCc
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA--FTHCPRER 196 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~--~~~~~~~~ 196 (303)
|.. .+..+++++|+|||+|+.... ..+....+++|+.++.+++++|++. ++++|||+||. |+.....+
T Consensus 80 d~~------~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS~~vyg~~~~~~ 152 (348)
T PRK15181 80 KFT------DCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAASSSTYGDHPDLP 152 (348)
T ss_pred CHH------HHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeechHhhCCCCCCC
Confidence 876 678888999999999997543 2345567899999999999999998 89999999998 44333344
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH------------HHHHHHHhhhhhhcc
Q psy17679 197 IDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI------------GMLVGIATGVLHTHL 261 (303)
Q Consensus 197 ~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~------------~~~~~~~~~~~~~~~ 261 (303)
..|+....|. ..|..+|.++|.+++.+...+. +++|| +++|||. .++.....+....++
T Consensus 153 ~~e~~~~~p~---~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~---~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~ 226 (348)
T PRK15181 153 KIEERIGRPL---SPYAVTKYVNELYADVFARSYEFNAIGLRY---FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYIN 226 (348)
T ss_pred CCCCCCCCCC---ChhhHHHHHHHHHHHHHHHHhCCCEEEEEe---cceeCcCCCCCCccccCHHHHHHHHHcCCCcEEe
Confidence 5565443444 4577888899999887755443 67776 4666653 234455556666678
Q ss_pred CCCCccccceehhHHHHHHHHHHhhc
Q psy17679 262 INLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 262 ~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+++.+.++|+|++|+|++++.++..+
T Consensus 227 g~g~~~rd~i~v~D~a~a~~~~~~~~ 252 (348)
T PRK15181 227 GDGSTSRDFCYIENVIQANLLSATTN 252 (348)
T ss_pred CCCCceEeeEEHHHHHHHHHHHHhcc
Confidence 88999999999999999999877643
|
|
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-28 Score=210.53 Aligned_cols=226 Identities=19% Similarity=0.204 Sum_probs=167.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+++|+||||+||||++|++.||++||. |++.+|++.+....+-+.++. .+.+++..+.+|+.|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~---V~gtVR~~~~~k~~~~L~~l~-------------~a~~~l~l~~aDL~d 68 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYT---VRGTVRDPEDEKKTEHLRKLE-------------GAKERLKLFKADLLD 68 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCE---EEEEEcCcchhhhHHHHHhcc-------------cCcccceEEeccccc
Confidence 5689999999999999999999999998 999999987533222233332 123578999999999
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceecccccc--HHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC-------
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFDEH--IKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP------- 193 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~--~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~------- 193 (303)
.+ ++.+++++||.|+|+|.+..+... ..+.++..+.|+.+++++|++...++|+|++||..+...
T Consensus 69 ~~------sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~ 142 (327)
T KOG1502|consen 69 EG------SFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGE 142 (327)
T ss_pred cc------hHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCC
Confidence 99 799999999999999999876443 447899999999999999999944999999999944322
Q ss_pred CCccccCCCCCCC---ChhhHHHHHHHHHHHHHHhhCcCCc---EEeeccee------cCccChHHHHHHHHhhhhhhcc
Q psy17679 194 RERIDEEFYPVPL---KYENLIQLISETGDEELSEMTPNRV---HISGTGWI------DNVYGPIGMLVGIATGVLHTHL 261 (303)
Q Consensus 194 ~~~~~E~~~~~~~---~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~------~~~~g~~~~~~~~~~~~~~~~~ 261 (303)
...++|+.+..+. ..-.-|..+|..+|+.+++++...+ ..+.|+.+ ............++.|.....
T Consensus 143 ~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~- 221 (327)
T KOG1502|consen 143 NSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETY- 221 (327)
T ss_pred CcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccC-
Confidence 2256665554332 1124577889999999999887765 34445433 211222234455555543322
Q ss_pred CCCCccccceehhHHHHHHHHHHhhcccCCcc
Q psy17679 262 INLNTVTDMVPVDLVVNSMISIAWSIGESGKV 293 (303)
Q Consensus 262 ~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~ 293 (303)
......|+||+|+|.+++.++++|...++.
T Consensus 222 --~n~~~~~VdVrDVA~AHv~a~E~~~a~GRy 251 (327)
T KOG1502|consen 222 --PNFWLAFVDVRDVALAHVLALEKPSAKGRY 251 (327)
T ss_pred --CCCceeeEeHHHHHHHHHHHHcCcccCceE
Confidence 234455999999999999999999888764
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.5e-28 Score=211.50 Aligned_cols=209 Identities=24% Similarity=0.312 Sum_probs=158.0
Q ss_pred EEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCCC
Q psy17679 48 FLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGL 127 (303)
Q Consensus 48 lItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~ 127 (303)
|||||+||+|++|+++|+++|+ +..|.++++.+...... .+ ......+++++|++|.+
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-~~~Vr~~d~~~~~~~~~-~~-----------------~~~~~~~~~~~Di~d~~--- 58 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-IYEVRVLDRSPPPKFLK-DL-----------------QKSGVKEYIQGDITDPE--- 58 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-ceEEEEcccccccccch-hh-----------------hcccceeEEEeccccHH---
Confidence 6999999999999999999985 34588888876532200 10 00133449999999988
Q ss_pred CHHHHHHHhccccEEEEcceeccccc--cHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC---CCcc---cc
Q psy17679 128 SETDRATLVKQVNIVFHGAATVRFDE--HIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP---RERI---DE 199 (303)
Q Consensus 128 ~~~~~~~~~~~~dvVi~~a~~~~~~~--~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~---~~~~---~E 199 (303)
++.++++++|+|||+|++..... +.+.++++|+.|+++++++|.+. +++||||+||..+... ..++ +|
T Consensus 59 ---~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytSS~~vv~~~~~~~~~~~~dE 134 (280)
T PF01073_consen 59 ---SLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTSSISVVFDNYKGDPIINGDE 134 (280)
T ss_pred ---HHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcCcceeEeccCCCCcccCCc
Confidence 89999999999999999876643 56789999999999999999998 9999999999965443 2233 23
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhhCc----CC--c--EEeecceecCccChHH------HHHHHHhhhhhhccCCCC
Q psy17679 200 EFYPVPLKYENLIQLISETGDEELSEMTP----NR--V--HISGTGWIDNVYGPIG------MLVGIATGVLHTHLINLN 265 (303)
Q Consensus 200 ~~~~~~~~~~~~~~~~k~~~E~~~~~~~~----~~--~--~ii~pg~~~~~~g~~~------~~~~~~~~~~~~~~~~~~ 265 (303)
. ...+..+...|..+|.++|+++.++.. .. . .++||. .+|||.. +......+......+.+.
T Consensus 135 ~-~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~---~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~ 210 (280)
T PF01073_consen 135 D-TPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPA---GIYGPGDQRLVPRLVKMVRSGLFLFQIGDGN 210 (280)
T ss_pred C-CcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEecc---EEeCcccccccchhhHHHHhcccceeecCCC
Confidence 3 233445777899999999999998766 11 2 678884 6788763 333333344445677778
Q ss_pred ccccceehhHHHHHHHHHHhh
Q psy17679 266 TVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 266 ~~~~~i~v~D~a~ai~~~~~~ 286 (303)
...+++|++|+|.+++++++.
T Consensus 211 ~~~~~vyV~NvA~ahvlA~~~ 231 (280)
T PF01073_consen 211 NLFDFVYVENVAHAHVLAAQA 231 (280)
T ss_pred ceECcEeHHHHHHHHHHHHHH
Confidence 889999999999999998764
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-26 Score=199.65 Aligned_cols=211 Identities=25% Similarity=0.340 Sum_probs=165.3
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLG 126 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~ 126 (303)
|||||||||+|++++++|+++|+. |+.+.|++......... .+++++.+|+.+.+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~---v~~~~~~~~~~~~~~~~--------------------~~~~~~~~dl~~~~-- 55 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHE---VIVLSRSSNSESFEEKK--------------------LNVEFVIGDLTDKE-- 55 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTE---EEEEESCSTGGHHHHHH--------------------TTEEEEESETTSHH--
T ss_pred EEEEccCCHHHHHHHHHHHHcCCc---ccccccccccccccccc--------------------ceEEEEEeeccccc--
Confidence 799999999999999999999998 78888887644321110 37899999999876
Q ss_pred CCHHHHHHHhcc--ccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC--cccCCCCcccc
Q psy17679 127 LSETDRATLVKQ--VNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA--FTHCPRERIDE 199 (303)
Q Consensus 127 ~~~~~~~~~~~~--~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~--~~~~~~~~~~E 199 (303)
.+.++++. +|+|||+|+.... .......++.|+.++.++++++.+. ++++||++||. |+.....+++|
T Consensus 56 ----~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~sS~~~y~~~~~~~~~e 130 (236)
T PF01370_consen 56 ----QLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLSSASVYGDPDGEPIDE 130 (236)
T ss_dssp ----HHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEGGGGTSSSSSSBET
T ss_pred ----cccccccccCceEEEEeeccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccc
Confidence 78888885 5999999998531 2455678889999999999999999 78999999999 44444456777
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH-----------HHHHHHHhhhhhhccCCCC
Q psy17679 200 EFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI-----------GMLVGIATGVLHTHLINLN 265 (303)
Q Consensus 200 ~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~-----------~~~~~~~~~~~~~~~~~~~ 265 (303)
+....|.+ .|..+|...|++++.+...+. +++||+. +|||. .++..+..+....+++.+.
T Consensus 131 ~~~~~~~~---~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~---vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (236)
T PF01370_consen 131 DSPINPLS---PYGASKRAAEELLRDYAKKYGLRVTILRPPN---VYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGS 204 (236)
T ss_dssp TSGCCHSS---HHHHHHHHHHHHHHHHHHHHTSEEEEEEESE---EESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSS
T ss_pred cccccccc---ccccccccccccccccccccccccccccccc---cccccccccccccccchhhHHhhcCCcccccCCCC
Confidence 76554444 477788889999998876533 7777754 44444 3666666777777889999
Q ss_pred ccccceehhHHHHHHHHHHhhcccCCcc
Q psy17679 266 TVTDMVPVDLVVNSMISIAWSIGESGKV 293 (303)
Q Consensus 266 ~~~~~i~v~D~a~ai~~~~~~~~~~~~~ 293 (303)
+.++|+|++|+|++++.++.++...+..
T Consensus 205 ~~~~~i~v~D~a~~~~~~~~~~~~~~~~ 232 (236)
T PF01370_consen 205 QVRDFIHVDDLAEAIVAALENPKAAGGI 232 (236)
T ss_dssp CEEEEEEHHHHHHHHHHHHHHSCTTTEE
T ss_pred CccceEEHHHHHHHHHHHHhCCCCCCCE
Confidence 9999999999999999999998834333
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=209.49 Aligned_cols=211 Identities=16% Similarity=0.142 Sum_probs=153.1
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC-
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS- 121 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~- 121 (303)
+|+|||||||||+|++|+++|++. |++ |++++|+... ...++. ..+++++.+|+.
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~---V~~~~r~~~~------~~~~~~--------------~~~~~~~~~Dl~~ 57 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWE---VYGMDMQTDR------LGDLVN--------------HPRMHFFEGDITI 57 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCe---EEEEeCcHHH------HHHhcc--------------CCCeEEEeCCCCC
Confidence 368999999999999999999987 576 9999886421 111111 146889999998
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCCc
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRER 196 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~~ 196 (303)
+.. .+..+++++|+|||+|+.... ..+....+++|+.++.+++++|++. + +||||+||..+++ ...+
T Consensus 58 ~~~------~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS~~vyg~~~~~~ 129 (347)
T PRK11908 58 NKE------WIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMCPDEE 129 (347)
T ss_pred CHH------HHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEecceeeccCCCcC
Confidence 433 566778899999999997432 3455677899999999999999987 5 7999999994433 3334
Q ss_pred cccCCCC---CC-CChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH----------------HHHHHHH
Q psy17679 197 IDEEFYP---VP-LKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI----------------GMLVGIA 253 (303)
Q Consensus 197 ~~E~~~~---~~-~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~----------------~~~~~~~ 253 (303)
+.|+... .| ..+...|..+|..+|+++..+..... +++||+ ++|||. .++..+.
T Consensus 130 ~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~---~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~ 206 (347)
T PRK11908 130 FDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPF---NWIGPGLDSIYTPKEGSSRVVTQFLGHIV 206 (347)
T ss_pred cCccccccccCcCCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeee---eeeCCCccCCCccccCCcchHHHHHHHHh
Confidence 5555422 12 23556788999999999988754333 677664 444442 2333444
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+....+++.+.+.++|||++|+|++++.++.++.
T Consensus 207 ~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~ 241 (347)
T PRK11908 207 RGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKD 241 (347)
T ss_pred CCCceEEecCCceeeccccHHHHHHHHHHHHhCcc
Confidence 56555566778889999999999999999998753
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=203.06 Aligned_cols=236 Identities=24% Similarity=0.266 Sum_probs=182.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
++||+||||||+|++++..|+.+-. ..|+|++|..+...+.+++++.+.... .+...+..+++++.||+.++.
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~--~kv~cLVRA~s~E~a~~RL~~~~~~~~-----~~~e~~~~ri~vv~gDl~e~~ 73 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKTFDLYR-----HWDELSADRVEVVAGDLAEPD 73 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCC--CcEEEEEecCCHHHHHHHHHHHhhhhh-----hhhhhhcceEEEEeccccccc
Confidence 4799999999999999999998833 469999999998889999988877222 223344589999999999999
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCc------cc
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRER------ID 198 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~------~~ 198 (303)
+|++...+.++.+.+|.|||+|+..+.-.++.+....|+.|+..++++|... +.|.++|+||+++...... ..
T Consensus 74 lGL~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVSsisv~~~~~~~~~~~~~~ 152 (382)
T COG3320 74 LGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-KPKPLHYVSSISVGETEYYSNFTVDFD 152 (382)
T ss_pred CCCCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEeeeeeccccccCCCccccc
Confidence 9999999999999999999999999999999999999999999999999997 8899999999965443221 11
Q ss_pred cC--CCCCCCChhhHHHHHHHHHHHHHHhhCcCCc--EEeecceecCccC-----hHHHHHHHHhhhhh-hccCCCCccc
Q psy17679 199 EE--FYPVPLKYENLIQLISETGDEELSEMTPNRV--HISGTGWIDNVYG-----PIGMLVGIATGVLH-THLINLNTVT 268 (303)
Q Consensus 199 E~--~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~~~~~g-----~~~~~~~~~~~~~~-~~~~~~~~~~ 268 (303)
+. +......+.+.|..+||.+|.+++.+.+... +|+|||.+.+... ...++.+++.+... .++.......
T Consensus 153 ~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~~~~~ 232 (382)
T COG3320 153 EISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEYSL 232 (382)
T ss_pred cccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCcccch
Confidence 11 1112334567899999999999999988854 9999998754443 33566666665443 2233345566
Q ss_pred cceehhHHHHHHHHHHhhcc
Q psy17679 269 DMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 269 ~~i~v~D~a~ai~~~~~~~~ 288 (303)
+.++++.+++++......+.
T Consensus 233 ~~~p~~~v~~~v~~~~~~~~ 252 (382)
T COG3320 233 DMLPVDHVARAVVAPSVQVA 252 (382)
T ss_pred hhCccceeeEEeehhhhhHH
Confidence 67777777666666555543
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.8e-26 Score=209.91 Aligned_cols=220 Identities=12% Similarity=0.064 Sum_probs=152.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
..+.|+|||||||||||++|++.|+++ |++ |++++|+.... ..+.... .+.+..+++++.+|
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~---V~~l~r~~~~~------~~l~~~~--------~~~~~~~~~~~~~D 73 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHK---VLALDVYNDKI------KHLLEPD--------TVPWSGRIQFHRIN 73 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCCCE---EEEEecCchhh------hhhhccc--------cccCCCCeEEEEcC
Confidence 355689999999999999999999998 466 88888864321 1111100 00112479999999
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC--C
Q psy17679 120 CSLPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP--R 194 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~--~ 194 (303)
+.|.. .+.++++++|+|||+|+.... ..+....+..|+.++.+++++|.+. + +||||+||.++++. .
T Consensus 74 l~d~~------~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS~~vYg~~~~ 145 (386)
T PLN02427 74 IKHDS------RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVYGKTIG 145 (386)
T ss_pred CCChH------HHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEeeeeeeCCCcC
Confidence 99976 688888999999999997542 2233455678999999999999887 5 89999999944332 1
Q ss_pred CccccCCCCC------------------C-CChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH-----
Q psy17679 195 ERIDEEFYPV------------------P-LKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG----- 247 (303)
Q Consensus 195 ~~~~E~~~~~------------------~-~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~----- 247 (303)
...+|+.... | ..+.+.|..+|.++|+++..+..... +++||+ ++|||..
T Consensus 146 ~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~---~vyGp~~~~~~~ 222 (386)
T PLN02427 146 SFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPF---NWIGPRMDFIPG 222 (386)
T ss_pred CCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEeccc---ceeCCCCCcccc
Confidence 1222221110 0 12234688899999999988765433 677775 4455431
Q ss_pred ----------H----HHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 248 ----------M----LVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 248 ----------~----~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+ +..+..+.+..+++++.+.++|||++|+|++++.++.++.
T Consensus 223 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~ 277 (386)
T PLN02427 223 IDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPA 277 (386)
T ss_pred ccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcc
Confidence 1 2333445555567777888999999999999999998753
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-26 Score=211.53 Aligned_cols=223 Identities=16% Similarity=0.107 Sum_probs=155.3
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc-c-------------HHHHHHHHHHhHHHhhhhcc
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK-D-------------IQERLDAIFEDRLFWRLRAE 105 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~-~-------------~~~~l~~l~~~~~~~~~~~~ 105 (303)
...++|+||||||+||||++|++.|+++|++ |++++|..... . ..++++.+..
T Consensus 43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~---V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------- 109 (442)
T PLN02572 43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYE---VAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKE---------- 109 (442)
T ss_pred ccccCCEEEEECCCcHHHHHHHHHHHHCCCe---EEEEeccccccccccccccccccccchHHHHHHHHH----------
Confidence 4567789999999999999999999999988 77766432110 0 0111111100
Q ss_pred CcCcCCceEEEEecCCCCCCCCCHHHHHHHhc--cccEEEEcceecccc------ccHHHHHhhhHHHHHHHHHHHHhcC
Q psy17679 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVK--QVNIVFHGAATVRFD------EHIKMAVKINVCGVQAMLQLAREMK 177 (303)
Q Consensus 106 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~~------~~~~~~~~~N~~~~~~ll~~a~~~~ 177 (303)
....+++++.+|++|.. .+..+++ ++|+|||+|+..... ..+...+++|+.++.+++++|+..
T Consensus 110 --~~~~~v~~v~~Dl~d~~------~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~- 180 (442)
T PLN02572 110 --VSGKEIELYVGDICDFE------FLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF- 180 (442)
T ss_pred --hhCCcceEEECCCCCHH------HHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-
Confidence 00146889999999976 6777777 589999999764321 112455789999999999999998
Q ss_pred CCc-eEEEEeCCcccCC-CCccccC-----------CCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecC
Q psy17679 178 DLK-AFVHVSTAFTHCP-RERIDEE-----------FYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDN 241 (303)
Q Consensus 178 ~~~-r~i~iSS~~~~~~-~~~~~E~-----------~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~ 241 (303)
+++ +||++||..+++. ..+.+|. +...|..+.+.|..+|..+|.+++.+...++ +++|| ++
T Consensus 181 gv~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~---~~ 257 (442)
T PLN02572 181 APDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQ---GV 257 (442)
T ss_pred CCCccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEec---cc
Confidence 775 9999999944332 1222222 1112445556788888889999988876654 56666 46
Q ss_pred ccChHH-------------------------HHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 242 VYGPIG-------------------------MLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 242 ~~g~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+|||+. ++.....+....++++|.+.++|+||+|+|++++.++.++
T Consensus 258 vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~ 328 (442)
T PLN02572 258 VYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANP 328 (442)
T ss_pred ccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhCh
Confidence 677641 2233344555567888999999999999999999998864
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=203.98 Aligned_cols=222 Identities=17% Similarity=0.135 Sum_probs=153.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
++++|+||||||+||||+++++.|++.|++ |++++|+.........+..+ ....++.++.+|+
T Consensus 6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~~~Dl 68 (338)
T PLN00198 6 PTGKKTACVIGGTGFLASLLIKLLLQKGYA---VNTTVRDPENQKKIAHLRAL--------------QELGDLKIFGADL 68 (338)
T ss_pred CCCCCeEEEECCchHHHHHHHHHHHHCCCE---EEEEECCCCCHHHHHHHHhc--------------CCCCceEEEEcCC
Confidence 456789999999999999999999999987 88888875422111110000 0013688999999
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceecccc--ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC-----
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVRFD--EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP----- 193 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~--~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~----- 193 (303)
+|.. ++.++++++|+|||+|+..... .....++++|+.++.++++++.+.++++|||++||..+...
T Consensus 69 ~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~ 142 (338)
T PLN00198 69 TDEE------SFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSG 142 (338)
T ss_pred CChH------HHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCC
Confidence 9987 6888889999999999975432 22335678999999999999988645889999999843321
Q ss_pred -CCccccCCCC------CCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH---------HHHHHHh
Q psy17679 194 -RERIDEEFYP------VPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG---------MLVGIAT 254 (303)
Q Consensus 194 -~~~~~E~~~~------~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~---------~~~~~~~ 254 (303)
..+++|+.+. .+..+...|..+|..+|.++..+...+. +++|| +++|||.. .+..+..
T Consensus 143 ~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~---~~vyGp~~~~~~~~~~~~~~~~~~ 219 (338)
T PLN00198 143 TGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIP---TLMAGPSLTSDIPSSLSLAMSLIT 219 (338)
T ss_pred CCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeC---CceECCCccCCCCCcHHHHHHHHc
Confidence 2234554211 1223455688899999999998766543 67776 46677642 1122333
Q ss_pred hhhhhccC-CC----CccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLI-NL----NTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~-~~----~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+....+.+ .+ ...++|+|++|+|++++.++..+.
T Consensus 220 ~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~ 258 (338)
T PLN00198 220 GNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKES 258 (338)
T ss_pred CCccccccccccccccCCcceeEHHHHHHHHHHHhhCcC
Confidence 43333333 12 124799999999999999998754
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-25 Score=202.85 Aligned_cols=218 Identities=19% Similarity=0.167 Sum_probs=155.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
.++|+||||||+||||+++++.|+++|++ |++++|+.+.... ..+..+. ....+++++.+|+.
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~---V~~~~r~~~~~~~-~~~~~~~-------------~~~~~~~~~~~Dl~ 70 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYT---VKGTVRNPDDPKN-THLRELE-------------GGKERLILCKADLQ 70 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE---EEEEeCCchhhhH-HHHHHhh-------------CCCCcEEEEecCcC
Confidence 35679999999999999999999999987 8899997542110 0111110 01136889999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC---cccCCC---C
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA---FTHCPR---E 195 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~---~~~~~~---~ 195 (303)
+.. .+..+++++|+|||+|+.. ..++...+++|+.++.+++++|.+. +++||||+||. |+.... .
T Consensus 71 d~~------~~~~~~~~~d~Vih~A~~~--~~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~avyg~~~~~~~~ 141 (342)
T PLN02214 71 DYE------ALKAAIDGCDGVFHTASPV--TDDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGAVYMDPNRDPEA 141 (342)
T ss_pred ChH------HHHHHHhcCCEEEEecCCC--CCCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeccceeeeccCCCCCCc
Confidence 977 6888899999999999975 2345678899999999999999998 88999999996 332221 2
Q ss_pred ccccCCCC---CCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH---------HHHHHHhhhhhhc
Q psy17679 196 RIDEEFYP---VPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG---------MLVGIATGVLHTH 260 (303)
Q Consensus 196 ~~~E~~~~---~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~---------~~~~~~~~~~~~~ 260 (303)
+++|+.+. .+..+...|..+|..+|++++.+..... +++||+ ++|||.. .+.....+... .
T Consensus 142 ~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~---~vyGp~~~~~~~~~~~~~~~~~~g~~~-~ 217 (342)
T PLN02214 142 VVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPV---LVLGPPLQPTINASLYHVLKYLTGSAK-T 217 (342)
T ss_pred ccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCC---ceECCCCCCCCCchHHHHHHHHcCCcc-c
Confidence 46676432 1233556788999999999988765433 677774 5566642 11122233322 1
Q ss_pred cCCCCccccceehhHHHHHHHHHHhhcccCC
Q psy17679 261 LINLNTVTDMVPVDLVVNSMISIAWSIGESG 291 (303)
Q Consensus 261 ~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~ 291 (303)
+ ++..++|||++|+|++++.++.++...+
T Consensus 218 ~--~~~~~~~i~V~Dva~a~~~al~~~~~~g 246 (342)
T PLN02214 218 Y--ANLTQAYVDVRDVALAHVLVYEAPSASG 246 (342)
T ss_pred C--CCCCcCeeEHHHHHHHHHHHHhCcccCC
Confidence 2 3567899999999999999998764433
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=201.95 Aligned_cols=221 Identities=18% Similarity=0.141 Sum_probs=153.2
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+||||||+||||+++++.|++.|++ |++++|.+.... .+.+..+.... ......+++++.+|++|.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~---V~~~~r~~~~~~-~~~~~~~~~~~--------~~~~~~~~~~~~~Dl~d~~ 68 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYE---VHGLIRRSSSFN-TQRIEHIYEDP--------HNVNKARMKLHYGDLTDSS 68 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCE---EEEEecCCcccc-hhhhhhhhhcc--------ccccccceeEEEeccCCHH
Confidence 58999999999999999999999987 889998754211 11222211100 0000146889999999976
Q ss_pred CCCCHHHHHHHhc--cccEEEEcceecccc---ccHHHHHhhhHHHHHHHHHHHHhcCCC---ceEEEEeCC--cccCCC
Q psy17679 125 LGLSETDRATLVK--QVNIVFHGAATVRFD---EHIKMAVKINVCGVQAMLQLAREMKDL---KAFVHVSTA--FTHCPR 194 (303)
Q Consensus 125 ~~~~~~~~~~~~~--~~dvVi~~a~~~~~~---~~~~~~~~~N~~~~~~ll~~a~~~~~~---~r~i~iSS~--~~~~~~ 194 (303)
.+..+++ ++|+|||+|+..... ......+++|+.++.+++++|.+. ++ ++|||+||. |+....
T Consensus 69 ------~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~SS~~vyg~~~~ 141 (343)
T TIGR01472 69 ------NLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQASTSELYGKVQE 141 (343)
T ss_pred ------HHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEeccHHhhCCCCC
Confidence 6788887 579999999975432 223456678999999999999987 54 489999999 443333
Q ss_pred CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHH-----------HHHHHHhhhh-hhccC
Q psy17679 195 ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIG-----------MLVGIATGVL-HTHLI 262 (303)
Q Consensus 195 ~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~-----------~~~~~~~~~~-~~~~~ 262 (303)
.+++|+.... +.+.|..+|..+|.+++.+...+..-+..+++++.|||.. .+..+..+.. ..+++
T Consensus 142 ~~~~E~~~~~---p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 218 (343)
T TIGR01472 142 IPQNETTPFY---PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLG 218 (343)
T ss_pred CCCCCCCCCC---CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeC
Confidence 4566665444 4456778888999999887665442222335556666531 1222333432 23457
Q ss_pred CCCccccceehhHHHHHHHHHHhhc
Q psy17679 263 NLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 263 ~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
++++.++|+|++|+|++++.++.++
T Consensus 219 ~g~~~rd~i~V~D~a~a~~~~~~~~ 243 (343)
T TIGR01472 219 NLDAKRDWGHAKDYVEAMWLMLQQD 243 (343)
T ss_pred CCccccCceeHHHHHHHHHHHHhcC
Confidence 7889999999999999999998865
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-25 Score=198.49 Aligned_cols=219 Identities=17% Similarity=0.181 Sum_probs=152.3
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|+|||||||||||++++++|++.|++ |++++|+...... ...+... ....++++++.+|+.+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~---V~~~~r~~~~~~~---~~~~~~~----------~~~~~~~~~~~~Dl~~ 66 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYT---VKATVRDPNDPKK---TEHLLAL----------DGAKERLHLFKANLLE 66 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCE---EEEEEcCCCchhh---HHHHHhc----------cCCCCceEEEeccccC
Confidence 4589999999999999999999999997 8888987543211 1111100 0012478899999999
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceecccc-ccH-HHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcc--cCC-----
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFD-EHI-KMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFT--HCP----- 193 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~-~~~-~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~--~~~----- 193 (303)
+. .+..+++++|+|||+|+..... ... ...+++|+.++.++++++.+..+++||||+||..+ ...
T Consensus 67 ~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~ 140 (322)
T PLN02662 67 EG------SFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTP 140 (322)
T ss_pred cc------hHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCC
Confidence 87 6889999999999999975432 222 36789999999999999987546789999999732 221
Q ss_pred CCccccCCCCCCC---ChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH---------HHHHHHhhhhh
Q psy17679 194 RERIDEEFYPVPL---KYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG---------MLVGIATGVLH 258 (303)
Q Consensus 194 ~~~~~E~~~~~~~---~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~---------~~~~~~~~~~~ 258 (303)
..+++|+....|. .....|..+|..+|++++.+..... +++||+ ++|||.. .+..+..+..
T Consensus 141 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~---~v~Gp~~~~~~~~~~~~~~~~~~~~~- 216 (322)
T PLN02662 141 DVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPA---MVIGPLLQPTLNTSAEAILNLINGAQ- 216 (322)
T ss_pred CCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCC---cccCCCCCCCCCchHHHHHHHhcCCc-
Confidence 1245665433332 1124688899999999887755433 778775 5566531 1122222221
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcccC
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
. .+.+.++|||++|+|++++.++.++...
T Consensus 217 -~--~~~~~~~~i~v~Dva~a~~~~~~~~~~~ 245 (322)
T PLN02662 217 -T--FPNASYRWVDVRDVANAHIQAFEIPSAS 245 (322)
T ss_pred -c--CCCCCcCeEEHHHHHHHHHHHhcCcCcC
Confidence 1 2356789999999999999999876433
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-25 Score=217.84 Aligned_cols=217 Identities=15% Similarity=0.141 Sum_probs=159.8
Q ss_pred cccccCCcEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEE
Q psy17679 38 MQEFYRDKTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAV 116 (303)
Q Consensus 38 ~~~~~~~~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~ 116 (303)
.+.+..+|+|||||||||||++|++.|++. |++ |++++|.+.... . +. ...+++++
T Consensus 309 ~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~---V~~l~r~~~~~~---~---~~--------------~~~~~~~~ 365 (660)
T PRK08125 309 ACSAKRRTRVLILGVNGFIGNHLTERLLRDDNYE---VYGLDIGSDAIS---R---FL--------------GHPRFHFV 365 (660)
T ss_pred hhhhhcCCEEEEECCCchHHHHHHHHHHhCCCcE---EEEEeCCchhhh---h---hc--------------CCCceEEE
Confidence 345677899999999999999999999986 677 999999753211 0 00 01478899
Q ss_pred EecCCCCCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC-
Q psy17679 117 AGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC- 192 (303)
Q Consensus 117 ~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~- 192 (303)
.+|+++... .+..+++++|+|||+|+.... ..+....+++|+.++.+++++|.+. + +||||+||.++++
T Consensus 366 ~gDl~d~~~-----~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~SS~~vyg~ 438 (660)
T PRK08125 366 EGDISIHSE-----WIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPSTSEVYGM 438 (660)
T ss_pred eccccCcHH-----HHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEcchhhcCC
Confidence 999998651 246677899999999997542 3345678899999999999999997 5 7999999994443
Q ss_pred -CCCccccCCCC---CCC-ChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH----------------HH
Q psy17679 193 -PRERIDEEFYP---VPL-KYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI----------------GM 248 (303)
Q Consensus 193 -~~~~~~E~~~~---~~~-~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~----------------~~ 248 (303)
...+++|+... .|. .+.+.|..+|.++|.++..+...++ .++||+ ++|||. .+
T Consensus 439 ~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~---~vyGp~~~~~~~~~~~~~~~i~~~ 515 (660)
T PRK08125 439 CTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPF---NWMGPRLDNLNAARIGSSRAITQL 515 (660)
T ss_pred CCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEc---eeeCCCccccccccccccchHHHH
Confidence 33456776532 232 2445688999999999998865544 677764 455553 13
Q ss_pred HHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 249 LVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+..+..+....+++++.+.++|+|++|+|++++.++.++
T Consensus 516 i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~ 554 (660)
T PRK08125 516 ILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENK 554 (660)
T ss_pred HHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhcc
Confidence 334444555556778889999999999999999999864
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.7e-25 Score=200.97 Aligned_cols=210 Identities=18% Similarity=0.094 Sum_probs=151.6
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|+|||||||||||+++++.|++.|++ |++++|...... . .......++.+|+.+
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~---V~~v~r~~~~~~--~-------------------~~~~~~~~~~~Dl~d 75 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHY---IIASDWKKNEHM--S-------------------EDMFCHEFHLVDLRV 75 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCE---EEEEEecccccc--c-------------------cccccceEEECCCCC
Confidence 5689999999999999999999999997 889998643110 0 000235688899998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccc----cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCC---
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRF----DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRE--- 195 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~----~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~--- 195 (303)
.+ .+..++.++|+|||+|+.... .......+..|+.++.+++++|... ++++|||+||...++...
T Consensus 76 ~~------~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~~vYg~~~~~~ 148 (370)
T PLN02695 76 ME------NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSACIYPEFKQLE 148 (370)
T ss_pred HH------HHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCchhhcCCccccC
Confidence 65 577777899999999986531 1233445678999999999999988 889999999984433211
Q ss_pred ---ccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH------------HHHHHHHh-hh
Q psy17679 196 ---RIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI------------GMLVGIAT-GV 256 (303)
Q Consensus 196 ---~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~------------~~~~~~~~-~~ 256 (303)
++.|+.. .|..+.+.|..+|..+|+++..+....+ +++||+ ++|||. .++..+.. +.
T Consensus 149 ~~~~~~E~~~-~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~---~vyGp~~~~~~~~~~~~~~~~~~~~~~~~ 224 (370)
T PLN02695 149 TNVSLKESDA-WPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFH---NIYGPFGTWKGGREKAPAAFCRKALTSTD 224 (370)
T ss_pred cCCCcCcccC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEEC---CccCCCCCccccccccHHHHHHHHHcCCC
Confidence 2444331 2444556778888999999888755433 677774 556653 23333333 23
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...+++++++.++|+|++|++++++.++..+
T Consensus 225 ~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~ 255 (370)
T PLN02695 225 EFEMWGDGKQTRSFTFIDECVEGVLRLTKSD 255 (370)
T ss_pred CeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc
Confidence 4456788899999999999999999987754
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.3e-25 Score=196.55 Aligned_cols=220 Identities=18% Similarity=0.257 Sum_probs=155.8
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+++||||||+||||++++++|++.|++ |+++.|+..... .+..+... .....+++++.+|+++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~---~~~~~~~~----------~~~~~~~~~~~~Dl~~ 67 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYT---VKATVRDLTDRK---KTEHLLAL----------DGAKERLKLFKADLLE 67 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEECCCcchH---HHHHHHhc----------cCCCCceEEEecCCCC
Confidence 4689999999999999999999999987 888899765322 22221110 0012478899999999
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceecccc--ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCccc--CC-----
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFD--EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTH--CP----- 193 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~--~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~--~~----- 193 (303)
.+ .+.++++++|+|||+|+..... .+....+++|+.++.++++++.+..+++|||++||..+. ..
T Consensus 68 ~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~ 141 (322)
T PLN02986 68 ES------SFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEA 141 (322)
T ss_pred cc------hHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCC
Confidence 87 6889999999999999975432 223457889999999999999885368999999998432 11
Q ss_pred CCccccCCCCCCC---ChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH---------HHHHHHHhhhhh
Q psy17679 194 RERIDEEFYPVPL---KYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI---------GMLVGIATGVLH 258 (303)
Q Consensus 194 ~~~~~E~~~~~~~---~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~---------~~~~~~~~~~~~ 258 (303)
...++|+.+..|. .+...|..+|..+|..++.+.+.+. +++||+. +|||. ..+..+..+..
T Consensus 142 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~---v~Gp~~~~~~~~~~~~~~~~~~g~~- 217 (322)
T PLN02986 142 NDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGF---ICGPLLQPTLNFSVELIVDFINGKN- 217 (322)
T ss_pred CCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccc---eeCCCCCCCCCccHHHHHHHHcCCC-
Confidence 2246666544332 2345688899999999988765544 7888864 45543 12333333332
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcccCC
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIGESG 291 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~ 291 (303)
.+ +.+.++|||++|+|++++.++.++...+
T Consensus 218 -~~--~~~~~~~v~v~Dva~a~~~al~~~~~~~ 247 (322)
T PLN02986 218 -LF--NNRFYRFVDVRDVALAHIKALETPSANG 247 (322)
T ss_pred -CC--CCcCcceeEHHHHHHHHHHHhcCcccCC
Confidence 12 3456899999999999999999775433
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.5e-25 Score=203.23 Aligned_cols=210 Identities=20% Similarity=0.249 Sum_probs=153.0
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
+.|||||||||||||++|++.|++.|++ |++++|..... ...+..+.. ..+++++.+|+.+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~---V~~ldr~~~~~--~~~~~~~~~--------------~~~~~~~~~Di~~ 179 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDE---VIVIDNFFTGR--KENLVHLFG--------------NPRFELIRHDVVE 179 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCE---EEEEeCCCCcc--HhHhhhhcc--------------CCceEEEECcccc
Confidence 3489999999999999999999999987 88888853221 111111100 1467888888876
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCCcc
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRERI 197 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~~~ 197 (303)
.. +.++|+|||+|+.... ..+....+++|+.++.+++++|++. +. +|||+||.++++ ...+.
T Consensus 180 ~~-----------~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~SS~~VYg~~~~~p~ 246 (436)
T PLN02166 180 PI-----------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLEHPQ 246 (436)
T ss_pred cc-----------ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECcHHHhCCCCCCCC
Confidence 43 2479999999997542 3345678899999999999999997 54 899999994443 23356
Q ss_pred ccCCC--CCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH----------HHHHHHHhhhhhhccC
Q psy17679 198 DEEFY--PVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI----------GMLVGIATGVLHTHLI 262 (303)
Q Consensus 198 ~E~~~--~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~----------~~~~~~~~~~~~~~~~ 262 (303)
+|+.+ ..|..+...|..+|..+|+++..+...+. .++|| +++|||. .++..+..+....+++
T Consensus 247 ~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~---~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g 323 (436)
T PLN02166 247 KETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARI---FNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYG 323 (436)
T ss_pred CccccccCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEE---ccccCCCCCCCccchHHHHHHHHhcCCCcEEeC
Confidence 66532 13444556688889999999988765543 55655 5777764 2344555566666788
Q ss_pred CCCccccceehhHHHHHHHHHHhhc
Q psy17679 263 NLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 263 ~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
++.+.++|+|++|+|++++.++...
T Consensus 324 ~g~~~rdfi~V~Dva~ai~~~~~~~ 348 (436)
T PLN02166 324 DGKQTRSFQYVSDLVDGLVALMEGE 348 (436)
T ss_pred CCCeEEeeEEHHHHHHHHHHHHhcC
Confidence 8889999999999999999998753
|
|
| >KOG1429|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-25 Score=187.04 Aligned_cols=218 Identities=20% Similarity=0.220 Sum_probs=173.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
..+.++|+||||.||||+||+++|+.+|++ |++++--.. ..+..++.+.+ ++.++.+.-|+
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~---VIa~Dn~ft--g~k~n~~~~~~--------------~~~fel~~hdv 84 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEGHE---VIALDNYFT--GRKENLEHWIG--------------HPNFELIRHDV 84 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcCCe---EEEEecccc--cchhhcchhcc--------------CcceeEEEeec
Confidence 456689999999999999999999999988 777765432 22333333322 25777777776
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceecc---ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC--cccCCCC
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVR---FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA--FTHCPRE 195 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~---~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~--~~~~~~~ 195 (303)
.. .++.++|.|+|.|+++. +..++-..+.+|+.++.+++-+|++. + +||++.||+ |+.+...
T Consensus 85 ~~-----------pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~aSTseVYgdp~~h 151 (350)
T KOG1429|consen 85 VE-----------PLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLLASTSEVYGDPLVH 151 (350)
T ss_pred hh-----------HHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEEeecccccCCcccC
Confidence 64 46778899999999865 34445567788999999999999996 3 899999999 6665555
Q ss_pred ccccCCCC--CCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHH----------HHHHHHhhhhhhccCC
Q psy17679 196 RIDEEFYP--VPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIG----------MLVGIATGVLHTHLIN 263 (303)
Q Consensus 196 ~~~E~~~~--~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~----------~~~~~~~~~~~~~~~~ 263 (303)
+..|.-+. .|..+...|...|..+|.++..+..+.+.-+|-+|++|.|||.. +..+...+.+.+++|+
T Consensus 152 pq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~ 231 (350)
T KOG1429|consen 152 PQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGD 231 (350)
T ss_pred CCccccccccCcCCchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcC
Confidence 66666554 67888999999999999999999988885555567799999873 6667777888899999
Q ss_pred CCccccceehhHHHHHHHHHHhhcccC
Q psy17679 264 LNTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 264 ~~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
|.+.++|.|++|+++++++++.++...
T Consensus 232 G~qtRSF~yvsD~Vegll~Lm~s~~~~ 258 (350)
T KOG1429|consen 232 GKQTRSFQYVSDLVEGLLRLMESDYRG 258 (350)
T ss_pred CcceEEEEeHHHHHHHHHHHhcCCCcC
Confidence 999999999999999999999987654
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.8e-25 Score=198.98 Aligned_cols=215 Identities=19% Similarity=0.240 Sum_probs=151.1
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+|||||||||||+++++.|+++|+++ |.++.|...... ...+..+ ....++.++.+|+.|.
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~--v~~~~~~~~~~~-~~~~~~~--------------~~~~~~~~~~~Dl~d~ 63 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDA--VVVVDKLTYAGN-LMSLAPV--------------AQSERFAFEKVDICDR 63 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCE--EEEEecCccccc-hhhhhhc--------------ccCCceEEEECCCcCh
Confidence 3689999999999999999999999872 334444322111 1111000 0013678899999997
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcceecccc---ccHHHHHhhhHHHHHHHHHHHHhc--------CCCceEEEEeCC--
Q psy17679 124 GLGLSETDRATLVK--QVNIVFHGAATVRFD---EHIKMAVKINVCGVQAMLQLAREM--------KDLKAFVHVSTA-- 188 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--~~dvVi~~a~~~~~~---~~~~~~~~~N~~~~~~ll~~a~~~--------~~~~r~i~iSS~-- 188 (303)
+ .+.++++ ++|+|||+||..... ..+...+++|+.++.++++++.+. .++++||++||.
T Consensus 64 ~------~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~v 137 (355)
T PRK10217 64 A------ELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEV 137 (355)
T ss_pred H------HHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhh
Confidence 6 6777777 599999999976432 245678899999999999999862 246799999997
Q ss_pred cccC--CCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH--------HHHHHHhh
Q psy17679 189 FTHC--PRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG--------MLVGIATG 255 (303)
Q Consensus 189 ~~~~--~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~--------~~~~~~~~ 255 (303)
|+.. ...+++|+....|. +.|..+|..+|.+++.+...+. ++++|+ ++|||.. ++.....+
T Consensus 138 yg~~~~~~~~~~E~~~~~p~---s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~---~v~Gp~~~~~~~~~~~~~~~~~~ 211 (355)
T PRK10217 138 YGDLHSTDDFFTETTPYAPS---SPYSASKASSDHLVRAWLRTYGLPTLITNCS---NNYGPYHFPEKLIPLMILNALAG 211 (355)
T ss_pred cCCCCCCCCCcCCCCCCCCC---ChhHHHHHHHHHHHHHHHHHhCCCeEEEeee---eeeCCCCCcccHHHHHHHHHhcC
Confidence 4422 12356776544444 4577788889999987754433 677764 4555542 23334445
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
....+++++++.++|+|++|+|++++.++...
T Consensus 212 ~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~ 243 (355)
T PRK10217 212 KPLPVYGNGQQIRDWLYVEDHARALYCVATTG 243 (355)
T ss_pred CCceEeCCCCeeeCcCcHHHHHHHHHHHHhcC
Confidence 54556788899999999999999999998864
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=202.99 Aligned_cols=210 Identities=18% Similarity=0.220 Sum_probs=152.5
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|||||||||||||++|++.|++.|++ |++++|..... .+.+...+ ...+++++.+|+.+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~---V~~ld~~~~~~--~~~~~~~~--------------~~~~~~~i~~D~~~ 178 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDS---VIVVDNFFTGR--KENVMHHF--------------SNPNFELIRHDVVE 178 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCE---EEEEeCCCccc--hhhhhhhc--------------cCCceEEEECCccC
Confidence 5589999999999999999999999987 88888753211 11111000 01467888999876
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCCcc
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRERI 197 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~~~ 197 (303)
+. +.++|+|||+|+.... ..+....+++|+.++.+++++|++. ++ +|||+||.+++. ...+.
T Consensus 179 ~~-----------l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS~~VYg~~~~~p~ 245 (442)
T PLN02206 179 PI-----------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLQHPQ 245 (442)
T ss_pred hh-----------hcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECChHHhCCCCCCCC
Confidence 43 2579999999997542 3356678899999999999999998 65 899999994443 33355
Q ss_pred ccCCC--CCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH----------HHHHHHHhhhhhhccC
Q psy17679 198 DEEFY--PVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI----------GMLVGIATGVLHTHLI 262 (303)
Q Consensus 198 ~E~~~--~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~----------~~~~~~~~~~~~~~~~ 262 (303)
+|+.+ ..|..+...|..+|..+|+++..+.+.+. .++|| +++|||. .++.....+....+++
T Consensus 246 ~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~---~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g 322 (442)
T PLN02206 246 VETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARI---FNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYG 322 (442)
T ss_pred CccccccCCCCCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEe---ccccCCCCCccccchHHHHHHHHHcCCCcEEeC
Confidence 66532 23555566788999999999988765443 55655 4667764 2334445555556788
Q ss_pred CCCccccceehhHHHHHHHHHHhhc
Q psy17679 263 NLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 263 ~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
++.+.++|+|++|+|++++.++.+.
T Consensus 323 ~G~~~rdfi~V~Dva~ai~~a~e~~ 347 (442)
T PLN02206 323 DGKQTRSFQFVSDLVEGLMRLMEGE 347 (442)
T ss_pred CCCEEEeEEeHHHHHHHHHHHHhcC
Confidence 8888999999999999999988754
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=196.62 Aligned_cols=222 Identities=17% Similarity=0.125 Sum_probs=155.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
.++|+||||||+||||++++++|++.|++ |++++|.++... ...++.+.. .......++.++.+|++
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~---V~~~~r~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~~Dl~ 70 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKGYE---VHGIIRRSSNFN-TQRLDHIYI---------DPHPNKARMKLHYGDLS 70 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCE---EEEEeccccccc-ccchhhhcc---------ccccccCceEEEEecCC
Confidence 45689999999999999999999999987 888888754211 011111100 00001246889999999
Q ss_pred CCCCCCCHHHHHHHhc--cccEEEEcceecccc---ccHHHHHhhhHHHHHHHHHHHHhcCCCc-----eEEEEeCC--c
Q psy17679 122 LPGLGLSETDRATLVK--QVNIVFHGAATVRFD---EHIKMAVKINVCGVQAMLQLAREMKDLK-----AFVHVSTA--F 189 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~~---~~~~~~~~~N~~~~~~ll~~a~~~~~~~-----r~i~iSS~--~ 189 (303)
|.. .+..+++ ++|+|||+|+..... ......+++|+.++.++++++.+. +++ +||++||. |
T Consensus 71 d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~~Ss~~vy 143 (340)
T PLN02653 71 DAS------SLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQAGSSEMY 143 (340)
T ss_pred CHH------HHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEEeccHHHh
Confidence 976 6777776 579999999975432 334566789999999999999987 654 89999998 5
Q ss_pred ccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHH-------H----HHHHHhhhhh
Q psy17679 190 THCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIG-------M----LVGIATGVLH 258 (303)
Q Consensus 190 ~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~-------~----~~~~~~~~~~ 258 (303)
+.... +++|+... .+...|..+|..+|.+++.+...++..+.++++++.|||.. . +..+..+...
T Consensus 144 g~~~~-~~~E~~~~---~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~ 219 (340)
T PLN02653 144 GSTPP-PQSETTPF---HPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQK 219 (340)
T ss_pred CCCCC-CCCCCCCC---CCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCC
Confidence 44332 56666543 44556788888999999888766553333446667776531 1 1222234333
Q ss_pred hc-cCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 259 TH-LINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 259 ~~-~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.+ ++++++.++|+|++|+|++++.++.+.
T Consensus 220 ~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~ 249 (340)
T PLN02653 220 KLFLGNLDASRDWGFAGDYVEAMWLMLQQE 249 (340)
T ss_pred ceEeCCCcceecceeHHHHHHHHHHHHhcC
Confidence 33 478899999999999999999999864
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-24 Score=195.34 Aligned_cols=220 Identities=18% Similarity=0.245 Sum_probs=150.6
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
+.|+||||||+||||++++++|++.|++ |++++|+..... .+..+.. .+....++.++.+|+.+
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~---V~~~~r~~~~~~---~~~~~~~----------~~~~~~~~~~v~~Dl~d 67 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYT---VRATVRDPANVK---KVKHLLD----------LPGATTRLTLWKADLAV 67 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCE---EEEEEcCcchhH---HHHHHHh----------ccCCCCceEEEEecCCC
Confidence 4578999999999999999999999987 888888754322 1111111 00111368899999999
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceecccc--ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC---CCc-
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFD--EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP---RER- 196 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~--~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~---~~~- 196 (303)
.. .+..+++++|+|||+|+..... .+....+++|+.++.++++++.+.+.++||||+||.++... ..+
T Consensus 68 ~~------~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~ 141 (351)
T PLN02650 68 EG------SFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPV 141 (351)
T ss_pred hh------hHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCc
Confidence 87 6888889999999999975432 22346789999999999999998733789999999843221 112
Q ss_pred cccCCCC------CCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH-------HHHHH--Hhhhhh
Q psy17679 197 IDEEFYP------VPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG-------MLVGI--ATGVLH 258 (303)
Q Consensus 197 ~~E~~~~------~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~-------~~~~~--~~~~~~ 258 (303)
++|+.+. .+..+...|..+|..+|.+++.+...++ .++||+ ++|||.. ++..+ ..+..
T Consensus 142 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~---~v~Gp~~~~~~~~~~~~~~~~~~~~~- 217 (351)
T PLN02650 142 YDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPT---LVVGPFISTSMPPSLITALSLITGNE- 217 (351)
T ss_pred cCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCC---ceECCCCCCCCCccHHHHHHHhcCCc-
Confidence 4555321 1112335688899999999988876544 677775 5566531 22111 11211
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
..++ ....++|+|++|+|++++.++.++..
T Consensus 218 ~~~~-~~~~r~~v~V~Dva~a~~~~l~~~~~ 247 (351)
T PLN02650 218 AHYS-IIKQGQFVHLDDLCNAHIFLFEHPAA 247 (351)
T ss_pred cccC-cCCCcceeeHHHHHHHHHHHhcCcCc
Confidence 1122 22347999999999999999987543
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.8e-24 Score=192.12 Aligned_cols=217 Identities=19% Similarity=0.243 Sum_probs=152.8
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|+||||||+||||+++++.|++.|++ |++++|++.... ....+... .....++.++.+|+++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~---V~~~~r~~~~~~---~~~~~~~~----------~~~~~~~~~~~~D~~d 67 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYT---INATVRDPKDRK---KTDHLLAL----------DGAKERLKLFKADLLD 67 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCE---EEEEEcCCcchh---hHHHHHhc----------cCCCCceEEEeCCCCC
Confidence 3589999999999999999999999997 888888764321 11111110 0111468899999999
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC-------
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC------- 192 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~------- 192 (303)
.+ .+.++++++|+|||+||.... ...+...+++|+.++.++++++.+..+.++||++||..+..
T Consensus 68 ~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~ 141 (325)
T PLN02989 68 EG------SFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLG 141 (325)
T ss_pred ch------HHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCC
Confidence 87 688888999999999997532 23346788999999999999998853568999999984321
Q ss_pred CCCccccCCCCCCCC---hhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH---------HHHHHHhhhh
Q psy17679 193 PRERIDEEFYPVPLK---YENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG---------MLVGIATGVL 257 (303)
Q Consensus 193 ~~~~~~E~~~~~~~~---~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~---------~~~~~~~~~~ 257 (303)
...+++|+.+..|.. +...|..+|..+|.++..+...+. +++||+ ++|||.. .+..+..+..
T Consensus 142 ~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~---~vyGp~~~~~~~~~~~~i~~~~~~~~ 218 (325)
T PLN02989 142 PNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPG---LVTGPILQPTLNFSVAVIVELMKGKN 218 (325)
T ss_pred CCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCC---ceeCCCCCCCCCchHHHHHHHHcCCC
Confidence 123467775554431 235688899999999988765543 677774 5566541 2222333332
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. + +...++|+|++|+|++++.++.++.
T Consensus 219 ~--~--~~~~r~~i~v~Dva~a~~~~l~~~~ 245 (325)
T PLN02989 219 P--F--NTTHHRFVDVRDVALAHVKALETPS 245 (325)
T ss_pred C--C--CCcCcCeeEHHHHHHHHHHHhcCcc
Confidence 1 2 2345799999999999999998764
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-23 Score=191.92 Aligned_cols=213 Identities=17% Similarity=0.134 Sum_probs=150.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+||||||+||||+++++.|++.|++ |++++|++....... ..+ .. ..++.++.+|+.
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~--~~~-~~-------------~~~~~~~~~Dl~ 62 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAE---VYGYSLDPPTSPNLF--ELL-NL-------------AKKIEDHFGDIR 62 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCE---EEEEeCCCccchhHH--HHH-hh-------------cCCceEEEccCC
Confidence 56789999999999999999999999987 888888764322110 101 00 136778999999
Q ss_pred CCCCCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCC--
Q psy17679 122 LPGLGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPR-- 194 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~-- 194 (303)
+.+ ++..+++ ++|+|||+|+.... ..++...+++|+.++.++++++...+.+++||++||..++...
T Consensus 63 ~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~ 136 (349)
T TIGR02622 63 DAA------KLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEW 136 (349)
T ss_pred CHH------HHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCC
Confidence 876 6777777 57999999996432 2345678899999999999999887337899999998443321
Q ss_pred -CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC--------Cc--EEeecceecCccChHH---------HHHHHHh
Q psy17679 195 -ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN--------RV--HISGTGWIDNVYGPIG---------MLVGIAT 254 (303)
Q Consensus 195 -~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~--------~~--~ii~pg~~~~~~g~~~---------~~~~~~~ 254 (303)
.++.|+....| .+.|..+|...|.+++.+... .. .++||+ ++|||.. ++.....
T Consensus 137 ~~~~~e~~~~~p---~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~---~vyGp~~~~~~~~~~~~~~~~~~ 210 (349)
T TIGR02622 137 VWGYRETDPLGG---HDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAG---NVIGGGDWAEDRLIPDVIRAFSS 210 (349)
T ss_pred CCCCccCCCCCC---CCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccC---cccCCCcchhhhhhHHHHHHHhc
Confidence 24555544344 445667777888888766432 12 677775 5566531 2233333
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
+.... ++++.+.++|+|++|+|++++.++.+
T Consensus 211 g~~~~-~~~g~~~rd~i~v~D~a~a~~~~~~~ 241 (349)
T TIGR02622 211 NKIVI-IRNPDATRPWQHVLEPLSGYLLLAEK 241 (349)
T ss_pred CCCeE-ECCCCcccceeeHHHHHHHHHHHHHH
Confidence 44333 45678999999999999999988875
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.92 E-value=8e-24 Score=207.94 Aligned_cols=219 Identities=19% Similarity=0.216 Sum_probs=152.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
..++|+|||||||||||++|++.|++.|+. ..|++++|...... +..+... ....+++++.+|+
T Consensus 3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~-~~V~~~d~~~~~~~----~~~l~~~-----------~~~~~v~~~~~Dl 66 (668)
T PLN02260 3 TYEPKNILITGAAGFIASHVANRLIRNYPD-YKIVVLDKLDYCSN----LKNLNPS-----------KSSPNFKFVKGDI 66 (668)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCCC-CEEEEEeCCCccch----hhhhhhc-----------ccCCCeEEEECCC
Confidence 346689999999999999999999998533 23888887532111 1111000 0125789999999
Q ss_pred CCCCCCCCHHHHHHHh--ccccEEEEcceecccc---ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCC-
Q psy17679 121 SLPGLGLSETDRATLV--KQVNIVFHGAATVRFD---EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPR- 194 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~--~~~dvVi~~a~~~~~~---~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~- 194 (303)
+|.+ .+..++ .++|+|||+|+..... .+...++++|+.++.+++++++..+.++||||+||..+++..
T Consensus 67 ~d~~------~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~ 140 (668)
T PLN02260 67 ASAD------LVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETD 140 (668)
T ss_pred CChH------HHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCc
Confidence 9976 455544 5899999999986543 234567889999999999999998348999999999444322
Q ss_pred -Cc---cccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH--------HHHHHHhhhhhh
Q psy17679 195 -ER---IDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG--------MLVGIATGVLHT 259 (303)
Q Consensus 195 -~~---~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~--------~~~~~~~~~~~~ 259 (303)
.+ ..|+.... +.+.|..+|..+|.++..+...+. +++||+ ++|||.. ++.....+....
T Consensus 141 ~~~~~~~~E~~~~~---p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~---~VyGp~~~~~~~i~~~~~~a~~g~~i~ 214 (668)
T PLN02260 141 EDADVGNHEASQLL---PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN---NVYGPNQFPEKLIPKFILLAMQGKPLP 214 (668)
T ss_pred cccccCccccCCCC---CCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcc---cccCcCCCcccHHHHHHHHHhCCCCeE
Confidence 11 23333333 444577888889999987765433 677774 6677652 223334455555
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+++++.+.++|||++|+|++++.++.++
T Consensus 215 i~g~g~~~r~~ihV~Dva~a~~~~l~~~ 242 (668)
T PLN02260 215 IHGDGSNVRSYLYCEDVAEAFEVVLHKG 242 (668)
T ss_pred EecCCCceEeeEEHHHHHHHHHHHHhcC
Confidence 6788888999999999999999988754
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=191.76 Aligned_cols=214 Identities=17% Similarity=0.172 Sum_probs=148.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||||||||||||+++++.|+++|+.+ |+++.|...... ...+..+. ...++.++.+|++|.+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~--v~~~~~~~~~~~-~~~~~~~~--------------~~~~~~~~~~Dl~d~~ 63 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDS--VVNVDKLTYAGN-LESLADVS--------------DSERYVFEHADICDRA 63 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCe--EEEecCCCccch-HHHHHhcc--------------cCCceEEEEecCCCHH
Confidence 579999999999999999999998752 555555321111 11111110 0146788999999976
Q ss_pred CCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhc--------CCCceEEEEeCCccc
Q psy17679 125 LGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREM--------KDLKAFVHVSTAFTH 191 (303)
Q Consensus 125 ~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~--------~~~~r~i~iSS~~~~ 191 (303)
++.++++ ++|+|||+|+.... ......++++|+.++.+++++|.+. +++++|||+||.+..
T Consensus 64 ------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vy 137 (352)
T PRK10084 64 ------ELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVY 137 (352)
T ss_pred ------HHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhc
Confidence 6777776 58999999997542 2335678999999999999999863 245799999998433
Q ss_pred CCC------------CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH--------H
Q psy17679 192 CPR------------ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG--------M 248 (303)
Q Consensus 192 ~~~------------~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~--------~ 248 (303)
+.. .+++|+.. ..+...|..+|..+|.+++.+...++ .+++|+ ++|||.. +
T Consensus 138 g~~~~~~~~~~~~~~~~~~E~~~---~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~---~v~Gp~~~~~~~~~~~ 211 (352)
T PRK10084 138 GDLPHPDEVENSEELPLFTETTA---YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCS---NNYGPYHFPEKLIPLV 211 (352)
T ss_pred CCCCccccccccccCCCccccCC---CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecc---ceeCCCcCccchHHHH
Confidence 321 12455543 34455678888899999987755443 566653 4566542 2
Q ss_pred HHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 249 LVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+.....+....+++++++.++|+|++|+|++++.++.++
T Consensus 212 ~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~ 250 (352)
T PRK10084 212 ILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTEG 250 (352)
T ss_pred HHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcC
Confidence 233333444456788899999999999999999988754
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-23 Score=191.65 Aligned_cols=229 Identities=22% Similarity=0.274 Sum_probs=180.7
Q ss_pred ChHHHhcccCCCCCCCCCCCCCCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHH
Q psy17679 13 DPLELLGEKSFGSPDDIPDDEIGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDA 92 (303)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~ 92 (303)
..+|||||.+ .+.+. ..+.+...+|+||||||+|.||+.+|+++++.+. ..|+.++|++.+. ..++.
T Consensus 227 ~ieDLLgR~p-V~~d~-------~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p--~~i~l~~~~E~~~---~~i~~ 293 (588)
T COG1086 227 EIEDLLGRPP-VALDT-------ELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRDEYKL---YLIDM 293 (588)
T ss_pred CHHHHhCCCC-CCCCH-------HHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCC--CEEEEecCchHHH---HHHHH
Confidence 3489999998 77776 6777889999999999999999999999999854 4699999987532 23322
Q ss_pred HHHhHHHhhhhccCcCcCCceEEEEecCCCCCCCCCHHHHHHHhcc--ccEEEEcceecc---ccccHHHHHhhhHHHHH
Q psy17679 93 IFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQ--VNIVFHGAATVR---FDEHIKMAVKINVCGVQ 167 (303)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~--~dvVi~~a~~~~---~~~~~~~~~~~N~~~~~ 167 (303)
-+...+ + ..++.++.||+.|.+ .+..++++ +|+|+|+|+.-+ .+.++.+.+++|+.|+.
T Consensus 294 el~~~~--------~--~~~~~~~igdVrD~~------~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~ 357 (588)
T COG1086 294 ELREKF--------P--ELKLRFYIGDVRDRD------RVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTE 357 (588)
T ss_pred HHHhhC--------C--CcceEEEecccccHH------HHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHH
Confidence 222111 1 268999999999988 79999996 999999999865 46788899999999999
Q ss_pred HHHHHHHhcCCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccC
Q psy17679 168 AMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYG 244 (303)
Q Consensus 168 ~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g 244 (303)
+++++|.++ ++++||.+||. +...|.+.+..+|.++|.++.++..... +.+.--|+.|+.|
T Consensus 358 nv~~aa~~~-~V~~~V~iSTD---------------KAV~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlG 421 (588)
T COG1086 358 NVAEAAIKN-GVKKFVLISTD---------------KAVNPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLG 421 (588)
T ss_pred HHHHHHHHh-CCCEEEEEecC---------------cccCCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceec
Confidence 999999999 99999999999 3445677888999999999998876322 3333235668887
Q ss_pred hHH-----HHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 245 PIG-----MLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 245 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.++ +..++..|.+.++. +++..+-|+.+.|.|+.++.+....
T Consensus 422 SrGSViPlFk~QI~~GgplTvT-dp~mtRyfMTI~EAv~LVlqA~a~~ 468 (588)
T COG1086 422 SRGSVIPLFKKQIAEGGPLTVT-DPDMTRFFMTIPEAVQLVLQAGAIA 468 (588)
T ss_pred CCCCCHHHHHHHHHcCCCcccc-CCCceeEEEEHHHHHHHHHHHHhhc
Confidence 654 45566667766655 5788889999999999998877753
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-23 Score=186.65 Aligned_cols=203 Identities=20% Similarity=0.237 Sum_probs=145.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+||||||+||||++++++|++.|. ...|++++|+.... ..+.+... ..++.++.+|++
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~-~~~V~~~~r~~~~~---~~~~~~~~--------------~~~~~~v~~Dl~ 63 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYN-PKKIIIYSRDELKQ---WEMQQKFP--------------APCLRFFIGDVR 63 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCC-CcEEEEEcCChhHH---HHHHHHhC--------------CCcEEEEEccCC
Confidence 4578999999999999999999999862 12388888864321 11111100 146889999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccc
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERID 198 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~ 198 (303)
|.+ .+..+++++|+|||+||.... ..+....+++|+.++.++++++.+. ++++||++||...
T Consensus 64 d~~------~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS~~~-------- 128 (324)
T TIGR03589 64 DKE------RLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALSTDKA-------- 128 (324)
T ss_pred CHH------HHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCC--------
Confidence 976 788888999999999997532 2344578899999999999999998 8889999999632
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHHHHhhC---cCCc---EEeecceecCccChH-----HHHHHHHhhhhhhccCCCCcc
Q psy17679 199 EEFYPVPLKYENLIQLISETGDEELSEMT---PNRV---HISGTGWIDNVYGPI-----GMLVGIATGVLHTHLINLNTV 267 (303)
Q Consensus 199 E~~~~~~~~~~~~~~~~k~~~E~~~~~~~---~~~~---~ii~pg~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~ 267 (303)
..|...|..+|..+|.+++.+. ...+ +++||| ++|||. .+......+......+++.+.
T Consensus 129 -------~~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g---~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~ 198 (324)
T TIGR03589 129 -------ANPINLYGATKLASDKLFVAANNISGSKGTRFSVVRYG---NVVGSRGSVVPFFKSLKEEGVTELPITDPRMT 198 (324)
T ss_pred -------CCCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeec---ceeCCCCCcHHHHHHHHHhCCCCeeeCCCCce
Confidence 1223457788888999887643 2223 788886 456652 222222233311223356788
Q ss_pred ccceehhHHHHHHHHHHhhc
Q psy17679 268 TDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 268 ~~~i~v~D~a~ai~~~~~~~ 287 (303)
++|+|++|+|++++.++.+.
T Consensus 199 r~~i~v~D~a~a~~~al~~~ 218 (324)
T TIGR03589 199 RFWITLEQGVNFVLKSLERM 218 (324)
T ss_pred EeeEEHHHHHHHHHHHHhhC
Confidence 99999999999999999864
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.9e-23 Score=186.82 Aligned_cols=237 Identities=25% Similarity=0.312 Sum_probs=165.2
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGL 125 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~ 125 (303)
+|+|||||||+|+++++.|++.|+. ..|++++|+.+.....+++.+.+..... .... ....+++++.+|++++.+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~-~~V~~l~R~~~~~~~~~~l~~~~~~~~~---~~~~-~~~~~v~~~~~D~~~~~~ 75 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQ-AKVICLVRAASEEHAMERLREALRSYRL---WQED-LARERIEVVAGDLSEPRL 75 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCC-CEEEEEEccCCHHHHHHHHHHHHHHhCC---CCch-hhhCCEEEEeCCcCcccC
Confidence 5899999999999999999999842 2499999987654444555443332110 0000 001579999999999998
Q ss_pred CCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCC--CccccCCCC
Q psy17679 126 GLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPR--ERIDEEFYP 203 (303)
Q Consensus 126 ~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~--~~~~E~~~~ 203 (303)
|++...+..+.+++|+|||+|+..+...++....+.|+.++.++++++.+. +.++|||+||.++.... .+..|+...
T Consensus 76 gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~~v~~~~~~~~~~~~~~~ 154 (367)
T TIGR01746 76 GLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-RAKPLHYVSTISVLAAIDLSTVTEDDAI 154 (367)
T ss_pred CcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEccccccCCcCCCCccccccc
Confidence 888888888888999999999988776777788889999999999999987 78889999999654321 122333221
Q ss_pred --CCCChhhHHHHHHHHHHHHHHhhCcCCc--EEeecceecCc--cC---hHHHHHHHHhhhh-hhccCCCC-cccccee
Q psy17679 204 --VPLKYENLIQLISETGDEELSEMTPNRV--HISGTGWIDNV--YG---PIGMLVGIATGVL-HTHLINLN-TVTDMVP 272 (303)
Q Consensus 204 --~~~~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~~~~--~g---~~~~~~~~~~~~~-~~~~~~~~-~~~~~i~ 272 (303)
.+..+...|..+|+.+|.++..+..... +++|||.+.+. .| +..++..+..... ...++... ...+|+|
T Consensus 155 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 234 (367)
T TIGR01746 155 VTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTP 234 (367)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCccc
Confidence 1222345688899999999987755433 89999866542 11 2223333332211 11222223 3678999
Q ss_pred hhHHHHHHHHHHhhcc
Q psy17679 273 VDLVVNSMISIAWSIG 288 (303)
Q Consensus 273 v~D~a~ai~~~~~~~~ 288 (303)
++|+|++++.++..+.
T Consensus 235 vddva~ai~~~~~~~~ 250 (367)
T TIGR01746 235 VDYVARAIVALSSQPA 250 (367)
T ss_pred HHHHHHHHHHHHhCCC
Confidence 9999999999987664
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-23 Score=185.24 Aligned_cols=221 Identities=14% Similarity=0.143 Sum_probs=151.6
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+++||||||+||||++++++|+++|++ |++++|+.+.......+..+. ....++.++.+|++|.
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~---V~~~~R~~~~~~~~~~~~~l~-------------~~~~~~~~~~~Dl~d~ 69 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRGYT---VHAAVQKNGETEIEKEIRGLS-------------CEEERLKVFDVDPLDY 69 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCE---EEEEEcCchhhhHHHHHHhcc-------------cCCCceEEEEecCCCH
Confidence 578999999999999999999999998 888898643221111111110 0114688999999998
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCccc--C-----CCC
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTH--C-----PRE 195 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~--~-----~~~ 195 (303)
+ .+..++.++|.|+|.++.... ...+...+++|+.++.++++++.+..+++|||++||..+. . ...
T Consensus 70 ~------~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~ 143 (297)
T PLN02583 70 H------SILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQK 143 (297)
T ss_pred H------HHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCC
Confidence 7 688899999999998765432 2235678999999999999999886357899999998432 1 112
Q ss_pred ccccCCCCCCC---ChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHHHH-HHHHhhhhhhccCCCCccc
Q psy17679 196 RIDEEFYPVPL---KYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIGML-VGIATGVLHTHLINLNTVT 268 (303)
Q Consensus 196 ~~~E~~~~~~~---~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 268 (303)
+++|+.+..+. .....|..+|.++|+.++.+....+ ++++|+. +|||.... .....+.. ..+ +...+
T Consensus 144 ~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~---v~Gp~~~~~~~~~~~~~-~~~--~~~~~ 217 (297)
T PLN02583 144 DVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGL---LMGPSLTQHNPYLKGAA-QMY--ENGVL 217 (297)
T ss_pred CCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCc---ccCCCCCCchhhhcCCc-ccC--cccCc
Confidence 45565432221 1112588899999999987754333 7888864 46654311 11222221 111 23456
Q ss_pred cceehhHHHHHHHHHHhhcccCCc
Q psy17679 269 DMVPVDLVVNSMISIAWSIGESGK 292 (303)
Q Consensus 269 ~~i~v~D~a~ai~~~~~~~~~~~~ 292 (303)
.||||+|+|++++.+++++...++
T Consensus 218 ~~v~V~Dva~a~~~al~~~~~~~r 241 (297)
T PLN02583 218 VTVDVNFLVDAHIRAFEDVSSYGR 241 (297)
T ss_pred ceEEHHHHHHHHHHHhcCcccCCc
Confidence 799999999999999997766553
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.5e-23 Score=183.21 Aligned_cols=192 Identities=21% Similarity=0.174 Sum_probs=139.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+||||||+||||+++++.|++.| + |++++|... .+.+|+.|.+
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~---V~~~~~~~~--------------------------------~~~~Dl~d~~ 44 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-N---LIALDVHST--------------------------------DYCGDFSNPE 44 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-C---EEEeccccc--------------------------------cccCCCCCHH
Confidence 579999999999999999999998 5 778887421 2468999876
Q ss_pred CCCCHHHHHHHhc--cccEEEEcceecccc---ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC--CCcc
Q psy17679 125 LGLSETDRATLVK--QVNIVFHGAATVRFD---EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP--RERI 197 (303)
Q Consensus 125 ~~~~~~~~~~~~~--~~dvVi~~a~~~~~~---~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~--~~~~ 197 (303)
.+.++++ ++|+|||+|+..... .+....+.+|+.++.+++++|... +. +|||+||.++++. ..++
T Consensus 45 ------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~Ss~~Vy~~~~~~p~ 116 (299)
T PRK09987 45 ------GVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYSTDYVFPGTGDIPW 116 (299)
T ss_pred ------HHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEccceEECCCCCCCc
Confidence 6777777 689999999986543 344567789999999999999998 54 8999999965543 3468
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChH--H----HHHHHHhhhhhhccCC--CCcccc
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPI--G----MLVGIATGVLHTHLIN--LNTVTD 269 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~--~----~~~~~~~~~~~~~~~~--~~~~~~ 269 (303)
+|++...|.+ .|..+|..+|+++..+...+ .++||+ ++|||. . ++..+..+....++++ +...+.
T Consensus 117 ~E~~~~~P~~---~Yg~sK~~~E~~~~~~~~~~-~ilR~~---~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~ 189 (299)
T PRK09987 117 QETDATAPLN---VYGETKLAGEKALQEHCAKH-LIFRTS---WVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGA 189 (299)
T ss_pred CCCCCCCCCC---HHHHHHHHHHHHHHHhCCCE-EEEecc---eecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCH
Confidence 8876555544 56678888999998876654 688875 446553 1 2233333444455554 444455
Q ss_pred ceehhHHHHHHHHHHhhc
Q psy17679 270 MVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 270 ~i~v~D~a~ai~~~~~~~ 287 (303)
+.+++|++.++..++..+
T Consensus 190 ~~~~d~~~~~~~~~~~~~ 207 (299)
T PRK09987 190 ELLADCTAHAIRVALNKP 207 (299)
T ss_pred HHHHHHHHHHHHHhhccC
Confidence 667777888888776543
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-23 Score=185.29 Aligned_cols=209 Identities=26% Similarity=0.249 Sum_probs=155.0
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|||||||||+|++|+++|++.|++ |++++|........ ...+.++.+|+.+.+
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~---V~~~~r~~~~~~~~----------------------~~~~~~~~~d~~~~~ 55 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHD---VRGLDRLRDGLDPL----------------------LSGVEFVVLDLTDRD 55 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCe---EEEEeCCCcccccc----------------------ccccceeeecccchH
Confidence 34999999999999999999999998 99999976533200 036788999999875
Q ss_pred CCCCHHHHHHHhccc-cEEEEcceecccccc----HHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC---CCCc
Q psy17679 125 LGLSETDRATLVKQV-NIVFHGAATVRFDEH----IKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC---PRER 196 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~-dvVi~~a~~~~~~~~----~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~---~~~~ 196 (303)
....+.+.+ |+|||+|+....... +..++++|+.++.+++++|.+. ++++|||.||.++.. ...+
T Consensus 56 ------~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-~~~~~v~~ss~~~~~~~~~~~~ 128 (314)
T COG0451 56 ------LVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA-GVKRFVFASSVSVVYGDPPPLP 128 (314)
T ss_pred ------HHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCCCceECCCCCCCC
Confidence 567777777 999999998764332 3458899999999999999996 999999977764322 2235
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH-------HH----HHHHhhhh-hhcc
Q psy17679 197 IDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG-------ML----VGIATGVL-HTHL 261 (303)
Q Consensus 197 ~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~-------~~----~~~~~~~~-~~~~ 261 (303)
++|+. .|..+...|..+|..+|+.+..+....+ .++||+ ++|||.. .. .....+.. ....
T Consensus 129 ~~E~~--~~~~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~---~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (314)
T COG0451 129 IDEDL--GPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPF---NVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIG 203 (314)
T ss_pred ccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeEEEeee---eeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEe
Confidence 77763 3333444788999999999998876332 677764 5565542 22 22344443 3344
Q ss_pred CCCCccccceehhHHHHHHHHHHhhcccC
Q psy17679 262 INLNTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 262 ~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
+++...++++|++|++++++.++.++...
T Consensus 204 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~ 232 (314)
T COG0451 204 GDGSQTRDFVYVDDVADALLLALENPDGG 232 (314)
T ss_pred CCCceeEeeEeHHHHHHHHHHHHhCCCCc
Confidence 56677789999999999999999987654
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-22 Score=184.08 Aligned_cols=218 Identities=17% Similarity=0.150 Sum_probs=151.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCccc-HHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKD-IQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~-~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++|+|+|||||||+|+++++.|++.|++ |++++|...... ...++..... ....+++++.+|+
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~---V~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~D~ 67 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGYK---VVVIDNLDNSSEEALRRVKELAG------------DLGDNLVFHKVDL 67 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCCcchHHHHHHHHHhhc------------ccCccceEEecCc
Confidence 55689999999999999999999999987 888887543211 1111111110 0124688999999
Q ss_pred CCCCCCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC--cccCC
Q psy17679 121 SLPGLGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA--FTHCP 193 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~--~~~~~ 193 (303)
.+.. .+..+++ ++|+|||+|+.... ...+...+++|+.++.++++++.+. ++++||++||. |+...
T Consensus 68 ~~~~------~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~vyg~~~ 140 (352)
T PLN02240 68 RDKE------ALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSSSATVYGQPE 140 (352)
T ss_pred CCHH------HHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCC
Confidence 9876 6777765 78999999997532 2345678899999999999999987 78899999998 44333
Q ss_pred CCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC-Cc---EEeecceecCccChH-----------------HHHHHH
Q psy17679 194 RERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN-RV---HISGTGWIDNVYGPI-----------------GMLVGI 252 (303)
Q Consensus 194 ~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~-~~---~ii~pg~~~~~~g~~-----------------~~~~~~ 252 (303)
..+++|+....| ...|..+|..+|.+++.+... .. .++|+ +++||+. .++..+
T Consensus 141 ~~~~~E~~~~~~---~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~---~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~ 214 (352)
T PLN02240 141 EVPCTEEFPLSA---TNPYGRTKLFIEEICRDIHASDPEWKIILLRY---FNPVGAHPSGRIGEDPKGIPNNLMPYVQQV 214 (352)
T ss_pred CCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHHHhcCCCCEEEEee---cCcCCCCccccccCCCCCCcchHHHHHHHH
Confidence 446777754444 456778899999999876432 22 45554 3444421 122333
Q ss_pred Hhhhh--hhccC------CCCccccceehhHHHHHHHHHHhhc
Q psy17679 253 ATGVL--HTHLI------NLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 253 ~~~~~--~~~~~------~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
..+.. ..+++ .+.+.++|||++|+|++++.++...
T Consensus 215 ~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~ 257 (352)
T PLN02240 215 AVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKL 257 (352)
T ss_pred HhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhh
Confidence 33321 12333 5688899999999999999888753
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.91 E-value=7e-23 Score=186.70 Aligned_cols=219 Identities=20% Similarity=0.200 Sum_probs=146.1
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|+||||||+||||+++++.|++.|++ |++++|+.... ..+ ... +. . ..+++++.+|+.+
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~---V~~~~r~~~~~---~~~---~~~-----~~----~-~~~~~~~~~Dl~~ 69 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYT---VHATLRDPAKS---LHL---LSK-----WK----E-GDRLRLFRADLQE 69 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCChHHH---HHH---HHh-----hc----c-CCeEEEEECCCCC
Confidence 4578999999999999999999999987 88888864321 111 110 00 0 1468899999999
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceecccc-----ccHH-----HHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFD-----EHIK-----MAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC 192 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~-----~~~~-----~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~ 192 (303)
.+ .+.++++++|+|||+|+..... .+.. ..+++|+.++.+++++|.+.+++++||++||..+.+
T Consensus 70 ~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg 143 (353)
T PLN02896 70 EG------SFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLT 143 (353)
T ss_pred HH------HHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhcc
Confidence 76 6888888999999999975432 1222 244556799999999998873478999999984432
Q ss_pred C-------CCccccCCCCC------CCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH------HHH
Q psy17679 193 P-------RERIDEEFYPV------PLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG------MLV 250 (303)
Q Consensus 193 ~-------~~~~~E~~~~~------~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~------~~~ 250 (303)
. ..+++|+.... +..+...|..+|..+|+++..+...+. .++|| +++|||.. .+.
T Consensus 144 ~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~---~~vyGp~~~~~~~~~~~ 220 (353)
T PLN02896 144 AKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVIT---TTVAGPFLTPSVPSSIQ 220 (353)
T ss_pred ccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcC---CcccCCCcCCCCCchHH
Confidence 1 12455542111 112334688999999999998876544 66665 57777742 122
Q ss_pred HHH---hhhhhh--ccCCC---CccccceehhHHHHHHHHHHhhccc
Q psy17679 251 GIA---TGVLHT--HLINL---NTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 251 ~~~---~~~~~~--~~~~~---~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.+. .|.... .++.. ...++|||++|+|++++.++..+..
T Consensus 221 ~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~ 267 (353)
T PLN02896 221 VLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKA 267 (353)
T ss_pred HHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCCc
Confidence 222 121111 11111 1236999999999999999986543
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.4e-23 Score=200.31 Aligned_cols=229 Identities=24% Similarity=0.292 Sum_probs=159.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHh--cCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLR--SCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~--~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
|+|||||||||||++|++.|++ .|++ |++++|+... ..+..+... + ...+++++.+|+.+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~---V~~l~R~~~~----~~~~~~~~~--------~---~~~~v~~~~~Dl~~ 62 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREAT---VHVLVRRQSL----SRLEALAAY--------W---GADRVVPLVGDLTE 62 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCE---EEEEECcchH----HHHHHHHHh--------c---CCCcEEEEecccCC
Confidence 5799999999999999999994 6666 9999996431 222222110 0 01578999999999
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC-CCccccCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP-RERIDEEF 201 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~-~~~~~E~~ 201 (303)
+.++++...+..+ .++|+|||+|+..+.........++|+.++.+++++|.+. ++++|||+||..+.+. ...++|+.
T Consensus 63 ~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~v~g~~~~~~~e~~ 140 (657)
T PRK07201 63 PGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIAVAGDYEGVFREDD 140 (657)
T ss_pred ccCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEeccccccCccCcccccc
Confidence 8877776667676 8999999999987766667778899999999999999998 7899999999955432 22345554
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHH-----------HHHHHHh--hh---hhhccCCCC
Q psy17679 202 YPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIG-----------MLVGIAT--GV---LHTHLINLN 265 (303)
Q Consensus 202 ~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~-----------~~~~~~~--~~---~~~~~~~~~ 265 (303)
...+..+...|..+|+.+|+++........+++||+.+ ||+.. .+...+. +. ....++.+.
T Consensus 141 ~~~~~~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v---~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (657)
T PRK07201 141 FDEGQGLPTPYHRTKFEAEKLVREECGLPWRVYRPAVV---VGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDG 217 (657)
T ss_pred chhhcCCCCchHHHHHHHHHHHHHcCCCcEEEEcCCee---eecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCC
Confidence 33333444568889999999998643222378888654 44310 1111111 11 112234455
Q ss_pred ccccceehhHHHHHHHHHHhhcccCCcchhh
Q psy17679 266 TVTDMVPVDLVVNSMISIAWSIGESGKVEKA 296 (303)
Q Consensus 266 ~~~~~i~v~D~a~ai~~~~~~~~~~~~~~~~ 296 (303)
...+++|++|+|++++.++..+...+..+++
T Consensus 218 ~~~~~v~vddva~ai~~~~~~~~~~g~~~ni 248 (657)
T PRK07201 218 GRTNIVPVDYVADALDHLMHKDGRDGQTFHL 248 (657)
T ss_pred CeeeeeeHHHHHHHHHHHhcCcCCCCCEEEe
Confidence 6789999999999999998765554444443
|
|
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=181.22 Aligned_cols=230 Identities=20% Similarity=0.227 Sum_probs=165.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
.++||||||.||||+|.+.+|++.|+.|..|..++|.- .....+++.+... ..++.++++|++|.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~--~~sl~r~~~l~~~-------------~~~v~f~~~Dl~D~ 66 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSY--LESLKRVRQLLGE-------------GKSVFFVEGDLNDA 66 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccc--hhHHHHHHHhcCC-------------CCceEEEEeccCCH
Confidence 47899999999999999999999999966666666653 2334444443321 37899999999998
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcceeccccc---cHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC--cccCCCCc
Q psy17679 124 GLGLSETDRATLVK--QVNIVFHGAATVRFDE---HIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA--FTHCPRER 196 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--~~dvVi~~a~~~~~~~---~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~--~~~~~~~~ 196 (303)
. .+.++++ ++|.|+|+|+...... ++..++..|+.|+.+|++.+++. +++.+||.||+ |+.+..-|
T Consensus 67 ~------~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~sssatvYG~p~~ip 139 (343)
T KOG1371|consen 67 E------ALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFSSSATVYGLPTKVP 139 (343)
T ss_pred H------HHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEecceeeecCcceee
Confidence 7 6899998 7999999999876433 33567788999999999999999 79999999999 66666778
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc-EEeecceecCccC--h------------HHHH---HHHHhhhhh
Q psy17679 197 IDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV-HISGTGWIDNVYG--P------------IGML---VGIATGVLH 258 (303)
Q Consensus 197 ~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~-~ii~pg~~~~~~g--~------------~~~~---~~~~~~~~~ 258 (303)
++|+.... .|.+.|..+|.+.|+++......+. .+... |+++++| | +.++ .+...+..+
T Consensus 140 ~te~~~t~--~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~L-Ryfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~ 216 (343)
T KOG1371|consen 140 ITEEDPTD--QPTNPYGKTKKAIEEIIHDYNKAYGWKVTGL-RYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRP 216 (343)
T ss_pred ccCcCCCC--CCCCcchhhhHHHHHHHHhhhccccceEEEE-EeccccCccccCccCCCCccCcccccccccchhhcccc
Confidence 99987655 2555566777789999998877766 11111 3445554 1 1111 112222211
Q ss_pred --h------ccCCCCccccceehhHHHHHHHHHHhhcccCCcchhhccc
Q psy17679 259 --T------HLINLNTVTDMVPVDLVVNSMISIAWSIGESGKVEKAINK 299 (303)
Q Consensus 259 --~------~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~~~~~~~ 299 (303)
. ...+|+..+++||+-|+|++++.++.+.....+.. ++|.
T Consensus 217 ~l~v~g~d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~-i~Nl 264 (343)
T KOG1371|consen 217 NLQVVGRDYTTIDGTIVRDYIHVLDLADGHVAALGKLRGAAEFG-VYNL 264 (343)
T ss_pred cceeecCcccccCCCeeecceeeEehHHHHHHHhhccccchhee-eEee
Confidence 1 12245889999999999999999999876543333 4443
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-22 Score=182.00 Aligned_cols=213 Identities=19% Similarity=0.182 Sum_probs=150.0
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGL 125 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~ 125 (303)
+|+|||||||+|++++++|++.|.. ..|++++|...... .+.++.+.. ..++.++.+|+++++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~-~~v~~~~~~~~~~~-~~~~~~~~~--------------~~~~~~~~~Dl~~~~- 63 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPD-AEVIVLDKLTYAGN-LENLADLED--------------NPRYRFVKGDIGDRE- 63 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCC-CEEEEecCCCcchh-hhhhhhhcc--------------CCCcEEEEcCCcCHH-
Confidence 5899999999999999999998732 23777776432111 112211110 146888999999987
Q ss_pred CCCHHHHHHHhcc--ccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCC-ceEEEEeCCcccCC--C-Cc
Q psy17679 126 GLSETDRATLVKQ--VNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDL-KAFVHVSTAFTHCP--R-ER 196 (303)
Q Consensus 126 ~~~~~~~~~~~~~--~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~-~r~i~iSS~~~~~~--~-~~ 196 (303)
++.+++++ +|+|||+|+.... .......+++|+.++.++++++.+. +. .++|++||.++.+. . .+
T Consensus 64 -----~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~Ss~~v~g~~~~~~~ 137 (317)
T TIGR01181 64 -----LVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKY-WHEFRFHHISTDEVYGDLEKGDA 137 (317)
T ss_pred -----HHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEeeccceeCCCCCCCC
Confidence 68888876 9999999997543 2345677899999999999999886 43 38999999844332 2 14
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH--------HHHHHHHhhhhhhccCCCC
Q psy17679 197 IDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI--------GMLVGIATGVLHTHLINLN 265 (303)
Q Consensus 197 ~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~--------~~~~~~~~~~~~~~~~~~~ 265 (303)
++|..... +...|..+|..+|.+++.+..... +++||+. +|||. .++.....+....+++.+.
T Consensus 138 ~~e~~~~~---~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~---i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 211 (317)
T TIGR01181 138 FTETTPLA---PSSPYSASKAASDHLVRAYHRTYGLPALITRCSN---NYGPYQFPEKLIPLMITNALAGKPLPVYGDGQ 211 (317)
T ss_pred cCCCCCCC---CCCchHHHHHHHHHHHHHHHHHhCCCeEEEEecc---ccCCCCCcccHHHHHHHHHhcCCCceEeCCCc
Confidence 66664433 345677888889999887654433 7888764 45542 2334444455555677788
Q ss_pred ccccceehhHHHHHHHHHHhhc
Q psy17679 266 TVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 266 ~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
..++|+|++|+|+++..++.+.
T Consensus 212 ~~~~~i~v~D~a~~~~~~~~~~ 233 (317)
T TIGR01181 212 QVRDWLYVEDHCRAIYLVLEKG 233 (317)
T ss_pred eEEeeEEHHHHHHHHHHHHcCC
Confidence 8999999999999999998754
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-23 Score=174.84 Aligned_cols=223 Identities=19% Similarity=0.216 Sum_probs=162.7
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
.++++||||+||||++.+..+... +.-....+++.=..-.. +..++. ..+.++..++.+|+.+.
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~-~p~~~~v~idkL~~~s~-~~~l~~--------------~~n~p~ykfv~~di~~~ 69 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDK-YPDYKFVNLDKLDYCSN-LKNLEP--------------VRNSPNYKFVEGDIADA 69 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccC-CCCCcEEEEeecccccc-cchhhh--------------hccCCCceEeeccccch
Confidence 389999999999999999999988 54333444443211111 122211 23458999999999997
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcceeccccc---cHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC--cccCCCCc
Q psy17679 124 GLGLSETDRATLVK--QVNIVFHGAATVRFDE---HIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA--FTHCPRER 196 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--~~dvVi~~a~~~~~~~---~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~--~~~~~~~~ 196 (303)
. .+..++. ++|.|+|+|+...... +.-.+...|+.++..|++.++.++++++|||+||. ||......
T Consensus 70 ~------~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~ 143 (331)
T KOG0747|consen 70 D------LVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDA 143 (331)
T ss_pred H------HHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccc
Confidence 7 4555554 8999999999876533 23456677999999999999999889999999999 55544443
Q ss_pred cc-cCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc--EEeecceecCccChHH--------HHHHHHhhhhhhccCCCC
Q psy17679 197 ID-EEFYPVPLKYENLIQLISETGDEELSEMTPNRV--HISGTGWIDNVYGPIG--------MLVGIATGVLHTHLINLN 265 (303)
Q Consensus 197 ~~-E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~~~~~g~~~--------~~~~~~~~~~~~~~~~~~ 265 (303)
.. |...+.|..||. .+|.++|.+++++...++ +++. |..|+|||++ ++.....+....+.|+|.
T Consensus 144 ~~~E~s~~nPtnpyA---asKaAaE~~v~Sy~~sy~lpvv~~--R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~ 218 (331)
T KOG0747|consen 144 VVGEASLLNPTNPYA---ASKAAAEMLVRSYGRSYGLPVVTT--RMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGL 218 (331)
T ss_pred cccccccCCCCCchH---HHHHHHHHHHHHHhhccCCcEEEE--eccCccCCCcChHHHhHHHHHHHHhCCCcceecCcc
Confidence 33 666667776655 566779999999999998 3333 5689999985 233344455567788999
Q ss_pred ccccceehhHHHHHHHHHHhhcccCCcch
Q psy17679 266 TVTDMVPVDLVVNSMISIAWSIGESGKVE 294 (303)
Q Consensus 266 ~~~~~i~v~D~a~ai~~~~~~~~~~~~~~ 294 (303)
+.++|+|++|+++++..++.+ ...+.++
T Consensus 219 ~~rs~l~veD~~ea~~~v~~K-g~~geIY 246 (331)
T KOG0747|consen 219 QTRSYLYVEDVSEAFKAVLEK-GELGEIY 246 (331)
T ss_pred cceeeEeHHHHHHHHHHHHhc-CCcccee
Confidence 999999999999999998887 3333333
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.5e-23 Score=182.66 Aligned_cols=202 Identities=23% Similarity=0.181 Sum_probs=132.3
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLG 126 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~ 126 (303)
|||||||||||++|++.|++.|++ ++++.|+....... ..+..+|+.|..
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~---~v~~~~~~~~~~~~-------------------------~~~~~~~~~d~~-- 51 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGIT---DILVVDNLKDGTKF-------------------------VNLVDLDIADYM-- 51 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCc---eEEEecCCCcchHH-------------------------Hhhhhhhhhhhh--
Confidence 899999999999999999999986 55665653321100 011233444422
Q ss_pred CCHHH-HHHHh-----ccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC--CCcc
Q psy17679 127 LSETD-RATLV-----KQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP--RERI 197 (303)
Q Consensus 127 ~~~~~-~~~~~-----~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~--~~~~ 197 (303)
+..+ +..++ .++|+|||+|+.... ..+....++.|+.++.+++++|.+. ++ +|||+||.++++. ..+.
T Consensus 52 -~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~vyg~~~~~~~ 128 (308)
T PRK11150 52 -DKEDFLAQIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTDDFI 128 (308)
T ss_pred -hHHHHHHHHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchHHhCcCCCCCC
Confidence 0012 23333 269999999986432 2233457899999999999999997 66 6999999954432 2345
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH------------HHHHHHhhhhhhcc-
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG------------MLVGIATGVLHTHL- 261 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~------------~~~~~~~~~~~~~~- 261 (303)
+|.....| .+.|..+|..+|++++.+..... +++||+ ++|||+. +...+..+....++
T Consensus 129 ~E~~~~~p---~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~---~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 202 (308)
T PRK11150 129 EEREYEKP---LNVYGYSKFLFDEYVRQILPEANSQICGFRYF---NVYGPREGHKGSMASVAFHLNNQLNNGENPKLFE 202 (308)
T ss_pred ccCCCCCC---CCHHHHHHHHHHHHHHHHHHHcCCCEEEEeee---eecCCCCCCCCccchhHHHHHHHHhcCCCCEEec
Confidence 55543344 44577888889999888754433 677764 4455431 11334444433344
Q ss_pred CCCCccccceehhHHHHHHHHHHhhc
Q psy17679 262 INLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 262 ~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+.+...++|+|++|+|++++.++.+.
T Consensus 203 g~~~~~r~~i~v~D~a~a~~~~~~~~ 228 (308)
T PRK11150 203 GSENFKRDFVYVGDVAAVNLWFWENG 228 (308)
T ss_pred CCCceeeeeeeHHHHHHHHHHHHhcC
Confidence 44567899999999999999988754
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=185.82 Aligned_cols=221 Identities=15% Similarity=0.164 Sum_probs=150.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+||||||+||||+++++.|+++|++ |+++.|+... .+.+..+... . .......++.++.+|+
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~---V~~~~r~~~~---~~~l~~l~~~------~-~~~~~~~~~~~v~~Dl 116 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYS---VRIAVDTQED---KEKLREMEMF------G-EMGRSNDGIWTVMANL 116 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHhhh------c-cccccCCceEEEEcCC
Confidence 456789999999999999999999999997 8888886431 1112111100 0 0000013578899999
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceeccccc---cHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCc----cc--
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVRFDE---HIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAF----TH-- 191 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~---~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~----~~-- 191 (303)
+|.+ .+..+++++|.|||+|+...... ......++|+.++.++++++....+++||||+||.. +.
T Consensus 117 ~d~~------~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~ 190 (367)
T PLN02686 117 TEPE------SLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNY 190 (367)
T ss_pred CCHH------HHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccC
Confidence 9987 68888899999999999864322 224556789999999999998754689999999962 21
Q ss_pred CCC--CccccCCCC---CCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH------HHHHHHhhhh
Q psy17679 192 CPR--ERIDEEFYP---VPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG------MLVGIATGVL 257 (303)
Q Consensus 192 ~~~--~~~~E~~~~---~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~------~~~~~~~~~~ 257 (303)
... ..++|+.+. .+..+...|..+|..+|.+++.+....+ .++||+ ++|||.. .+.....+.
T Consensus 191 ~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~---~vyGp~~~~~~~~~~~~~~~g~- 266 (367)
T PLN02686 191 PHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPA---LVTGPGFFRRNSTATIAYLKGA- 266 (367)
T ss_pred CCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCC---ceECCCCCCCCChhHHHHhcCC-
Confidence 111 235555322 2334555688999999999987755433 677775 5566642 223334443
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
..++++ ..++|+||+|+|++++.++..
T Consensus 267 ~~~~g~--g~~~~v~V~Dva~A~~~al~~ 293 (367)
T PLN02686 267 QEMLAD--GLLATADVERLAEAHVCVYEA 293 (367)
T ss_pred CccCCC--CCcCeEEHHHHHHHHHHHHhc
Confidence 234443 345799999999999999985
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=181.34 Aligned_cols=206 Identities=24% Similarity=0.249 Sum_probs=153.3
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|+||||+||+|+++++.|++.|++ |++++|++..... + ...++.++.+|+.+.+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~---~------------------~~~~~~~~~~D~~~~~ 56 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEE---VRVLVRPTSDRRN---L------------------EGLDVEIVEGDLRDPA 56 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCE---EEEEEecCccccc---c------------------ccCCceEEEeeCCCHH
Confidence 47999999999999999999999987 9999997542110 0 0136889999999876
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC---CCCccccC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC---PRERIDEE 200 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~---~~~~~~E~ 200 (303)
++.++++++|+|||+|+.... ...+...+++|+.++.++++++... ++++||++||.++.. ...+++|+
T Consensus 57 ------~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~e~ 129 (328)
T TIGR03466 57 ------SLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVATLGVRGDGTPADET 129 (328)
T ss_pred ------HHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCcCCCCCCcCcc
Confidence 688888999999999986532 3346678899999999999999988 889999999995543 23467777
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH--------HHHHHHhhhhhhccCCCCcccc
Q psy17679 201 FYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG--------MLVGIATGVLHTHLINLNTVTD 269 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~ 269 (303)
....|....+.|..+|..+|++++.+..... +++||+. +||+.. ++.....+.... + .+...+
T Consensus 130 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~---~~G~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~ 203 (328)
T TIGR03466 130 TPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPST---PIGPRDIKPTPTGRIIVDFLNGKMPA-Y--VDTGLN 203 (328)
T ss_pred CCCCcccccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCc---cCCCCCCCCCcHHHHHHHHHcCCCce-e--eCCCcc
Confidence 6555555566788899999999998765533 7888864 455431 222333322211 1 234578
Q ss_pred ceehhHHHHHHHHHHhhc
Q psy17679 270 MVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 270 ~i~v~D~a~ai~~~~~~~ 287 (303)
|+|++|+|++++.++.++
T Consensus 204 ~i~v~D~a~a~~~~~~~~ 221 (328)
T TIGR03466 204 LVHVDDVAEGHLLALERG 221 (328)
T ss_pred eEEHHHHHHHHHHHHhCC
Confidence 999999999999998764
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.5e-22 Score=179.11 Aligned_cols=216 Identities=16% Similarity=0.132 Sum_probs=145.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|+||||+||+|+++++.|++.|++ |++++|...... ..+..+.. + ...++.++.+|++|.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~~~~~~~~--~~~~~~~~------~------~~~~~~~~~~Dl~d~~ 63 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHD---VVILDNLCNSKR--SVLPVIER------L------GGKHPTFVEGDIRNEA 63 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCe---EEEEecCCCchH--hHHHHHHH------h------cCCCceEEEccCCCHH
Confidence 57999999999999999999999987 777776532211 11111100 0 0135778899999876
Q ss_pred CCCCHHHHHHHhc--cccEEEEcceecccc---ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCccc--CCCCcc
Q psy17679 125 LGLSETDRATLVK--QVNIVFHGAATVRFD---EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTH--CPRERI 197 (303)
Q Consensus 125 ~~~~~~~~~~~~~--~~dvVi~~a~~~~~~---~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~--~~~~~~ 197 (303)
.+..+++ ++|+|||+|+..... ......+++|+.++.+++++++.. ++++||++||..+. ....++
T Consensus 64 ------~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~yg~~~~~~~ 136 (338)
T PRK10675 64 ------LLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSSSATVYGDQPKIPY 136 (338)
T ss_pred ------HHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhhCCCCCCcc
Confidence 5777765 699999999875432 234577889999999999999988 88999999998433 333456
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC--c--EEeecceec-----CccChH------H---HHHHHHhhhh--
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPNR--V--HISGTGWID-----NVYGPI------G---MLVGIATGVL-- 257 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~--~--~ii~pg~~~-----~~~g~~------~---~~~~~~~~~~-- 257 (303)
+|+... ..+...|..+|..+|++++.+.... . +++|++.+. ..||+. . .+..+..+..
T Consensus 137 ~E~~~~--~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 214 (338)
T PRK10675 137 VESFPT--GTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDS 214 (338)
T ss_pred ccccCC--CCCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCc
Confidence 666543 1234567788889999998875432 1 566643221 122221 1 2222222221
Q ss_pred hhccC------CCCccccceehhHHHHHHHHHHhh
Q psy17679 258 HTHLI------NLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 258 ~~~~~------~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
..+++ .+.+.++|+|++|+|++++.++..
T Consensus 215 ~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~ 249 (338)
T PRK10675 215 LAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEK 249 (338)
T ss_pred eEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHh
Confidence 12332 456789999999999999999875
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=181.23 Aligned_cols=192 Identities=15% Similarity=0.121 Sum_probs=137.7
Q ss_pred EEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCCC
Q psy17679 48 FLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGL 127 (303)
Q Consensus 48 lItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~ 127 (303)
||||||||||++|++.|++.|++ |+++.+. ..+|+.+..
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~---v~~~~~~-----------------------------------~~~Dl~~~~--- 39 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFT---NLVLRTH-----------------------------------KELDLTRQA--- 39 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCc---EEEeecc-----------------------------------ccCCCCCHH---
Confidence 69999999999999999999987 5444321 147888765
Q ss_pred CHHHHHHHhc--cccEEEEcceeccc----cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCCcccc
Q psy17679 128 SETDRATLVK--QVNIVFHGAATVRF----DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRERIDE 199 (303)
Q Consensus 128 ~~~~~~~~~~--~~dvVi~~a~~~~~----~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~~~~E 199 (303)
.+..+++ ++|+|||+|+.... .......++.|+.++.+++++|.+. ++++|||+||.++++ ...+++|
T Consensus 40 ---~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E 115 (306)
T PLN02725 40 ---DVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSCIYPKFAPQPIPE 115 (306)
T ss_pred ---HHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCceeecCCCCCCCCCH
Confidence 6777766 68999999997532 2344567889999999999999998 889999999995443 3456777
Q ss_pred CCCC-CCCChh-hHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH------------HHHHH----Hhhhhh
Q psy17679 200 EFYP-VPLKYE-NLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG------------MLVGI----ATGVLH 258 (303)
Q Consensus 200 ~~~~-~~~~~~-~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~------------~~~~~----~~~~~~ 258 (303)
+... .|..+. ..|..+|..+|++++.+..... +++||+ .+|||.. ++... ..+...
T Consensus 116 ~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~---~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 192 (306)
T PLN02725 116 TALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPT---NLYGPHDNFHPENSHVIPALIRRFHEAKANGAPE 192 (306)
T ss_pred HHhccCCCCCCcchHHHHHHHHHHHHHHHHHHhCCCEEEEEec---ceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCe
Confidence 6532 133332 3488889999988876654433 677775 4455431 12111 223333
Q ss_pred hc-cCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 259 TH-LINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 259 ~~-~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.+ ++.+.+.++|||++|+|++++.++.+.
T Consensus 193 ~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~ 222 (306)
T PLN02725 193 VVVWGSGSPLREFLHVDDLADAVVFLMRRY 222 (306)
T ss_pred EEEcCCCCeeeccccHHHHHHHHHHHHhcc
Confidence 33 677888899999999999999999864
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-22 Score=180.48 Aligned_cols=200 Identities=17% Similarity=0.167 Sum_probs=140.9
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|+|||||||+|+++++.|++.|++ |++++|+.+... .+ . ..+++++.+|+.|++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~---V~~l~R~~~~~~---~l----~--------------~~~v~~v~~Dl~d~~ 56 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQ---VRCLVRNLRKAS---FL----K--------------EWGAELVYGDLSLPE 56 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCe---EEEEEcChHHhh---hH----h--------------hcCCEEEECCCCCHH
Confidence 58999999999999999999999987 999999753211 00 0 147889999999987
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCCCCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPV 204 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~~~ 204 (303)
.+..+++++|+|||+++... .+.....++|+.++.+++++|++. +++||||+||..... .
T Consensus 57 ------~l~~al~g~d~Vi~~~~~~~--~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~~~~-----------~ 116 (317)
T CHL00194 57 ------TLPPSFKGVTAIIDASTSRP--SDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILNAEQ-----------Y 116 (317)
T ss_pred ------HHHHHHCCCCEEEECCCCCC--CCccchhhhhHHHHHHHHHHHHHc-CCCEEEEeccccccc-----------c
Confidence 78899999999999987432 223456778999999999999998 899999999964321 1
Q ss_pred CCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChH--HHHHHHHhhhhhhccCCCCccccceehhHHHHHHHH
Q psy17679 205 PLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPI--GMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMIS 282 (303)
Q Consensus 205 ~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~ 282 (303)
+.. .+..+|..+|++++...-. .+++||+.+ |+.. ........+.. .....+.+.++|||++|+|++++.
T Consensus 117 ~~~---~~~~~K~~~e~~l~~~~l~-~tilRp~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~ 188 (317)
T CHL00194 117 PYI---PLMKLKSDIEQKLKKSGIP-YTIFRLAGF---FQGLISQYAIPILEKQP-IWITNESTPISYIDTQDAAKFCLK 188 (317)
T ss_pred CCC---hHHHHHHHHHHHHHHcCCC-eEEEeecHH---hhhhhhhhhhhhccCCc-eEecCCCCccCccCHHHHHHHHHH
Confidence 111 2445677788888754222 279998643 3210 11111222222 223345678899999999999999
Q ss_pred HHhhcccCCcchhh
Q psy17679 283 IAWSIGESGKVEKA 296 (303)
Q Consensus 283 ~~~~~~~~~~~~~~ 296 (303)
++.++...+.++++
T Consensus 189 ~l~~~~~~~~~~ni 202 (317)
T CHL00194 189 SLSLPETKNKTFPL 202 (317)
T ss_pred HhcCccccCcEEEe
Confidence 99876555444433
|
|
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.1e-22 Score=175.61 Aligned_cols=218 Identities=20% Similarity=0.296 Sum_probs=162.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++.+|+||||+||+|++++.+|++++. ...|++++..+......+..... ...+++++++|+.
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~-~~~irv~D~~~~~~~~~~e~~~~---------------~~~~v~~~~~D~~ 65 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENEL-KLEIRVVDKTPTQSNLPAELTGF---------------RSGRVTVILGDLL 65 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhccc-ccEEEEeccCccccccchhhhcc---------------cCCceeEEecchh
Confidence 3567999999999999999999999973 23488888866421111110000 1268999999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceecc--ccc-cHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCc--
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVR--FDE-HIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRER-- 196 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~--~~~-~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~-- 196 (303)
+.. .+.+++.++ .|+|+|+... +.. +.+..+++|+.||.+++++|.+. +++++||+||.++....++
T Consensus 66 ~~~------~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtSs~~Vvf~g~~~~ 137 (361)
T KOG1430|consen 66 DAN------SISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTSSAYVVFGGEPII 137 (361)
T ss_pred hhh------hhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEecCceEEeCCeecc
Confidence 987 688999999 7777777543 223 46788999999999999999999 9999999999977654433
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC-Cc--EEeecceecCccChHH------HHHHHHhhhhhhccCCCCcc
Q psy17679 197 IDEEFYPVPLKYENLIQLISETGDEELSEMTPN-RV--HISGTGWIDNVYGPIG------MLVGIATGVLHTHLINLNTV 267 (303)
Q Consensus 197 ~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~-~~--~ii~pg~~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~ 267 (303)
..+++...|......|..+|..+|+++...... .. +++|| ..+|||+. ....+..|......+.+...
T Consensus 138 n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~---~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~ 214 (361)
T KOG1430|consen 138 NGDESLPYPLKHIDPYGESKALAEKLVLEANGSDDLYTCALRP---PGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENL 214 (361)
T ss_pred cCCCCCCCccccccccchHHHHHHHHHHHhcCCCCeeEEEEcc---ccccCCCCccccHHHHHHHHccCceEEeeccccc
Confidence 333344455656667888899999999988742 22 67776 67888863 44444556666777788889
Q ss_pred ccceehhHHHHHHHHHHhh
Q psy17679 268 TDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 268 ~~~i~v~D~a~ai~~~~~~ 286 (303)
.+|+++..++.+++.+...
T Consensus 215 ~~~~~~~Nva~ahilA~~a 233 (361)
T KOG1430|consen 215 NDFTYGENVAWAHILAARA 233 (361)
T ss_pred cceEEechhHHHHHHHHHH
Confidence 9999999999999987653
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-21 Score=167.06 Aligned_cols=192 Identities=20% Similarity=0.267 Sum_probs=151.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|||||++|++|..|++.|. .+++ |+.++|. ..|++|++
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~---v~a~~~~------------------------------------~~Ditd~~ 40 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFE---VIATDRA------------------------------------ELDITDPD 40 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCce---EEeccCc------------------------------------cccccChH
Confidence 459999999999999999998 4466 8888774 27899887
Q ss_pred CCCCHHHHHHHhc--cccEEEEcceecccc---ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCC--Ccc
Q psy17679 125 LGLSETDRATLVK--QVNIVFHGAATVRFD---EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPR--ERI 197 (303)
Q Consensus 125 ~~~~~~~~~~~~~--~~dvVi~~a~~~~~~---~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~--~~~ 197 (303)
.+.++++ ++|+|||+|+..+.+ ...+..+.+|..++.++.++|.+. + .++||+||.|++... .++
T Consensus 41 ------~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-g-a~lVhiSTDyVFDG~~~~~Y 112 (281)
T COG1091 41 ------AVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV-G-ARLVHISTDYVFDGEKGGPY 112 (281)
T ss_pred ------HHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh-C-CeEEEeecceEecCCCCCCC
Confidence 6788877 789999999998753 445788999999999999999998 3 589999999998644 479
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHH---HHHHHHhhhhhhccCCCCccccceehh
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIG---MLVGIATGVLHTHLINLNTVTDMVPVD 274 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~ 274 (303)
.|++...|. +.|..+|+..|..++.+.... .|+|.+|+++.+|.+. ++.....+.... .-.++..+.+++.
T Consensus 113 ~E~D~~~P~---nvYG~sKl~GE~~v~~~~~~~-~I~Rtswv~g~~g~nFv~tml~la~~~~~l~--vv~Dq~gsPt~~~ 186 (281)
T COG1091 113 KETDTPNPL---NVYGRSKLAGEEAVRAAGPRH-LILRTSWVYGEYGNNFVKTMLRLAKEGKELK--VVDDQYGSPTYTE 186 (281)
T ss_pred CCCCCCCCh---hhhhHHHHHHHHHHHHhCCCE-EEEEeeeeecCCCCCHHHHHHHHhhcCCceE--EECCeeeCCccHH
Confidence 998655554 577788899999999988665 5899888888887442 233333344333 3357888899999
Q ss_pred HHHHHHHHHHhhcccC
Q psy17679 275 LVVNSMISIAWSIGES 290 (303)
Q Consensus 275 D~a~ai~~~~~~~~~~ 290 (303)
|+|+++..++......
T Consensus 187 dlA~~i~~ll~~~~~~ 202 (281)
T COG1091 187 DLADAILELLEKEKEG 202 (281)
T ss_pred HHHHHHHHHHhccccC
Confidence 9999999998877554
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-21 Score=177.99 Aligned_cols=211 Identities=18% Similarity=0.152 Sum_probs=146.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
.++++|+|||||||||+++++.|+++|++ |++++|+.+.........+.. ....+++++.+|++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~---V~~l~R~~~~~~~~~~~~~~~-------------~~~~~v~~v~~Dl~ 121 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYN---VVAVAREKSGIRGKNGKEDTK-------------KELPGAEVVFGDVT 121 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEEechhhccccchhhHHh-------------hhcCCceEEEeeCC
Confidence 45689999999999999999999999987 999999764321110000000 01257889999999
Q ss_pred CCCCCCCHHHHHHHhc----cccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCcc
Q psy17679 122 LPGLGLSETDRATLVK----QVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERI 197 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~----~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~ 197 (303)
|++ .+..+++ ++|+||||++.... .....+++|+.++.++++++++. +++|||++||.++..
T Consensus 122 d~~------~l~~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iSS~~v~~----- 187 (390)
T PLN02657 122 DAD------SLRKVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREV-GAKHFVLLSAICVQK----- 187 (390)
T ss_pred CHH------HHHHHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHc-CCCEEEEEeeccccC-----
Confidence 987 6777776 59999999885321 12244677999999999999998 899999999996532
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC-CcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccc-cceehhH
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPN-RVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVT-DMVPVDL 275 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~-~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~D 275 (303)
| ...|..+|...|+.+...... ..+|+||+.+++.. ...+..+..+.+..+++++...+ .+||++|
T Consensus 188 -------p---~~~~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~--~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~D 255 (390)
T PLN02657 188 -------P---LLEFQRAKLKFEAELQALDSDFTYSIVRPTAFFKSL--GGQVEIVKDGGPYVMFGDGKLCACKPISEAD 255 (390)
T ss_pred -------c---chHHHHHHHHHHHHHHhccCCCCEEEEccHHHhccc--HHHHHhhccCCceEEecCCcccccCceeHHH
Confidence 2 223456777788887651111 12899997554322 12334444555555677776544 5799999
Q ss_pred HHHHHHHHHhhcccCCcch
Q psy17679 276 VVNSMISIAWSIGESGKVE 294 (303)
Q Consensus 276 ~a~ai~~~~~~~~~~~~~~ 294 (303)
+|++++.++.++...+++.
T Consensus 256 lA~~i~~~~~~~~~~~~~~ 274 (390)
T PLN02657 256 LASFIADCVLDESKINKVL 274 (390)
T ss_pred HHHHHHHHHhCccccCCEE
Confidence 9999999997654444433
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-21 Score=168.37 Aligned_cols=203 Identities=23% Similarity=0.273 Sum_probs=140.5
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCce----EEEEecCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKV----SAVAGDCSL 122 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v----~~~~~Dl~d 122 (303)
||||||+|.||+.|+++|++.+. ..|++++|++... -.++.-+.. ..+ .+++ .++.+|+.|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p--~~lil~d~~E~~l---~~l~~~l~~--------~~~--~~~v~~~~~~vigDvrd 65 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP--KKLILFDRDENKL---YELERELRS--------RFP--DPKVRFEIVPVIGDVRD 65 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB---SEEEEEES-HHHH---HHHHHHCHH--------HC----TTCEEEEE--CTSCCH
T ss_pred CEEEccccHHHHHHHHHHHhcCC--CeEEEeCCChhHH---HHHHHHHhh--------ccc--ccCcccccCceeecccC
Confidence 79999999999999999999854 4699999986432 222221110 000 1234 456899999
Q ss_pred CCCCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCcc
Q psy17679 123 PGLGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERI 197 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~ 197 (303)
.+ .+..+++ ++|+|+|+|+.-+. ..++.+.+++|+.|+.+++++|.+. ++++||++||.-
T Consensus 66 ~~------~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDK-------- 130 (293)
T PF02719_consen 66 KE------RLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDK-------- 130 (293)
T ss_dssp HH------HHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECG--------
T ss_pred HH------HHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccc--------
Confidence 87 7889998 99999999998653 5667788999999999999999999 999999999993
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH-----HHHHHHHhhhhhhccCCCCcccc
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI-----GMLVGIATGVLHTHLINLNTVTD 269 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~ 269 (303)
...|.+.+..+|..+|.++..+..... +.+.--|+.|+.|.+ .+..++..|.+.++. +++..+-
T Consensus 131 -------Av~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT-~p~mtRf 202 (293)
T PF02719_consen 131 -------AVNPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVT-DPDMTRF 202 (293)
T ss_dssp -------CSS--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEEC-ETT-EEE
T ss_pred -------cCCCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeC-CCCcEEE
Confidence 344667888999999999999987762 222222556777654 366677777776665 4688899
Q ss_pred ceehhHHHHHHHHHHhhc
Q psy17679 270 MVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 270 ~i~v~D~a~ai~~~~~~~ 287 (303)
|+.+++.++.++.++...
T Consensus 203 fmti~EAv~Lvl~a~~~~ 220 (293)
T PF02719_consen 203 FMTIEEAVQLVLQAAALA 220 (293)
T ss_dssp EE-HHHHHHHHHHHHHH-
T ss_pred EecHHHHHHHHHHHHhhC
Confidence 999999999999988754
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.6e-21 Score=171.63 Aligned_cols=203 Identities=20% Similarity=0.164 Sum_probs=137.6
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLG 126 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~ 126 (303)
|||||||||+|+++++.|++.|+. .|+++.|..... .+.. .....+.+|+.+.+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~--~v~~~~~~~~~~----~~~~------------------~~~~~~~~d~~~~~-- 54 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGIT--DILVVDNLRDGH----KFLN------------------LADLVIADYIDKED-- 54 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCc--eEEEEecCCCch----hhhh------------------hhheeeeccCcchh--
Confidence 699999999999999999999862 277777754321 1100 01124567777765
Q ss_pred CCHHHHHHHh----ccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC-CCccccC
Q psy17679 127 LSETDRATLV----KQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP-RERIDEE 200 (303)
Q Consensus 127 ~~~~~~~~~~----~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~-~~~~~E~ 200 (303)
.+..+. .++|+|||+|+.... ..+....+++|+.++.+++++|.+. ++ +|||+||.++++. ..++.|+
T Consensus 55 ----~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~vy~~~~~~~~e~ 128 (314)
T TIGR02197 55 ----FLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAATYGDGEAGFREG 128 (314)
T ss_pred ----HHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHHhcCCCCCCcccc
Confidence 344444 489999999997543 2345678899999999999999987 65 8999999855442 2344554
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhhC-c-CC---cEEeecceecCccChHH------------HHHHHHhhhhhhc---
Q psy17679 201 FYPVPLKYENLIQLISETGDEELSEMT-P-NR---VHISGTGWIDNVYGPIG------------MLVGIATGVLHTH--- 260 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~k~~~E~~~~~~~-~-~~---~~ii~pg~~~~~~g~~~------------~~~~~~~~~~~~~--- 260 (303)
+. +..+.+.|..+|..+|.+++.+. . .. .+++||+ ++|||.. ++.....+....+
T Consensus 129 ~~--~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~---~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (314)
T TIGR02197 129 RE--LERPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYF---NVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKS 203 (314)
T ss_pred cC--cCCCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEe---eccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecC
Confidence 32 12345567788889999987642 1 11 2567764 4555541 1223333333333
Q ss_pred ---cCCCCccccceehhHHHHHHHHHHhh
Q psy17679 261 ---LINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 261 ---~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
++.|++.++|+|++|+|++++.++..
T Consensus 204 ~~~~~~g~~~~~~i~v~D~a~~i~~~~~~ 232 (314)
T TIGR02197 204 SEGFKDGEQLRDFVYVKDVVDVNLWLLEN 232 (314)
T ss_pred ccccCCCCceeeeEEHHHHHHHHHHHHhc
Confidence 34577889999999999999999986
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-21 Score=171.94 Aligned_cols=192 Identities=20% Similarity=0.260 Sum_probs=133.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
||||||||+|++|++|++.|.+.|++ |+.+.|+ ..|+.|.+
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~---v~~~~r~------------------------------------~~dl~d~~ 41 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYE---VIATSRS------------------------------------DLDLTDPE 41 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEE---EEEESTT------------------------------------CS-TTSHH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCE---EEEeCch------------------------------------hcCCCCHH
Confidence 78999999999999999999998776 7777663 56777755
Q ss_pred CCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCC--Ccc
Q psy17679 125 LGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPR--ERI 197 (303)
Q Consensus 125 ~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~--~~~ 197 (303)
++.+.++ ++|+|||+|+..+. ..+.+..+.+|+.++.+|.++|... + .++||+||.+++... .++
T Consensus 42 ------~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~-~~li~~STd~VFdG~~~~~y 113 (286)
T PF04321_consen 42 ------AVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-G-ARLIHISTDYVFDGDKGGPY 113 (286)
T ss_dssp ------HHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEEEGGGS-SSTSSSB
T ss_pred ------HHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-C-CcEEEeeccEEEcCCccccc
Confidence 6777766 69999999998653 4567789999999999999999997 4 499999999887543 468
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChH---HHHHHHHhhhhhhccCCCCccccceehh
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPI---GMLVGIATGVLHTHLINLNTVTDMVPVD 274 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 274 (303)
+|++...|. +.|..+|..+|+.++...... .|+|++++++..+.+ .+...+..+....++ .+..+..++++
T Consensus 114 ~E~d~~~P~---~~YG~~K~~~E~~v~~~~~~~-~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~--~d~~~~p~~~~ 187 (286)
T PF04321_consen 114 TEDDPPNPL---NVYGRSKLEGEQAVRAACPNA-LILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLF--DDQYRSPTYVD 187 (286)
T ss_dssp -TTS----S---SHHHHHHHHHHHHHHHH-SSE-EEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEE--SSCEE--EEHH
T ss_pred ccCCCCCCC---CHHHHHHHHHHHHHHHhcCCE-EEEecceecccCCCchhhhHHHHHhcCCeeEee--CCceeCCEEHH
Confidence 888665554 566678888999999877744 699988775553322 233333334444443 47788999999
Q ss_pred HHHHHHHHHHhhccc
Q psy17679 275 LVVNSMISIAWSIGE 289 (303)
Q Consensus 275 D~a~ai~~~~~~~~~ 289 (303)
|+|+++..++.+...
T Consensus 188 dlA~~i~~l~~~~~~ 202 (286)
T PF04321_consen 188 DLARVILELIEKNLS 202 (286)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccc
Confidence 999999999998765
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.5e-21 Score=167.58 Aligned_cols=197 Identities=18% Similarity=0.208 Sum_probs=139.6
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGL 125 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~ 125 (303)
||||||||||+|+++++.|++.|++ |++++|+ .+|+.+.+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~---v~~~~r~------------------------------------~~d~~~~~- 40 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRV---VVALTSS------------------------------------QLDLTDPE- 40 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCE---EEEeCCc------------------------------------ccCCCCHH-
Confidence 5899999999999999999999987 8888773 35777655
Q ss_pred CCCHHHHHHHhcc--ccEEEEcceecccc---ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCCccc
Q psy17679 126 GLSETDRATLVKQ--VNIVFHGAATVRFD---EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRERID 198 (303)
Q Consensus 126 ~~~~~~~~~~~~~--~dvVi~~a~~~~~~---~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~~~~ 198 (303)
++.+++++ +|+|||+|+..... ......+++|+.++.++++++.+. +. +||++||.+++. ...+++
T Consensus 41 -----~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~Ss~~vy~~~~~~~~~ 113 (287)
T TIGR01214 41 -----ALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHISTDYVFDGEGKRPYR 113 (287)
T ss_pred -----HHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeeecCCCCCCCC
Confidence 67777774 59999999975432 234567889999999999999987 54 899999985543 334677
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHH----HHHHHhhhhhhccCCCCccccceehh
Q psy17679 199 EEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGM----LVGIATGVLHTHLINLNTVTDMVPVD 274 (303)
Q Consensus 199 E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~i~v~ 274 (303)
|+....| ...|..+|..+|.+++.+.. ..+++||+.+.+...+..+ +.....+....+. ++..++++|++
T Consensus 114 E~~~~~~---~~~Y~~~K~~~E~~~~~~~~-~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~v~ 187 (287)
T TIGR01214 114 EDDATNP---LNVYGQSKLAGEQAIRAAGP-NALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVV--DDQIGSPTYAK 187 (287)
T ss_pred CCCCCCC---cchhhHHHHHHHHHHHHhCC-CeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEe--cCCCcCCcCHH
Confidence 7654433 45677888889999987643 2378888655333221122 2222223222223 34678999999
Q ss_pred HHHHHHHHHHhhcccCCcchh
Q psy17679 275 LVVNSMISIAWSIGESGKVEK 295 (303)
Q Consensus 275 D~a~ai~~~~~~~~~~~~~~~ 295 (303)
|+|++++.++..+...+..++
T Consensus 188 Dva~a~~~~~~~~~~~~~~~n 208 (287)
T TIGR01214 188 DLARVIAALLQRLARARGVYH 208 (287)
T ss_pred HHHHHHHHHHhhccCCCCeEE
Confidence 999999999987643333333
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.5e-21 Score=162.53 Aligned_cols=224 Identities=17% Similarity=0.131 Sum_probs=170.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+.||||-||+-|++|++.|++.|++ |+++.|..+..+. .++ .|...+ -....++.++.+|++|.
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~---VhGi~Rrss~~n~-~ri-~L~~~~---------~~~~~~l~l~~gDLtD~ 67 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYE---VHGIKRRSSSFNT-PRI-HLYEDP---------HLNDPRLHLHYGDLTDS 67 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcE---EEEEeeccccCCc-ccc-eecccc---------ccCCceeEEEeccccch
Confidence 588999999999999999999999999 9999997543321 111 111111 11225688999999998
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcceeccccc---cHHHHHhhhHHHHHHHHHHHHhcCC-CceEEEEeCC--cccCCCC
Q psy17679 124 GLGLSETDRATLVK--QVNIVFHGAATVRFDE---HIKMAVKINVCGVQAMLQLAREMKD-LKAFVHVSTA--FTHCPRE 195 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--~~dvVi~~a~~~~~~~---~~~~~~~~N~~~~~~ll~~a~~~~~-~~r~i~iSS~--~~~~~~~ 195 (303)
. .+.++++ ++|.|+|.|+.+.... .+....+++..|+.+|+++.+..+. ..||...||+ ||.....
T Consensus 68 ~------~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~ 141 (345)
T COG1089 68 S------NLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEI 141 (345)
T ss_pred H------HHHHHHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccC
Confidence 7 6777777 8999999999976533 3456778899999999999998733 4689999999 8887888
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHH-----------HHHHHHhhhhhhc-cCC
Q psy17679 196 RIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIG-----------MLVGIATGVLHTH-LIN 263 (303)
Q Consensus 196 ~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~-----------~~~~~~~~~~~~~-~~~ 263 (303)
|..|.++..|.+||.. +|..+......+.+.++...+-|+++|.-+|.+ -+.++..|....+ +|.
T Consensus 142 pq~E~TPFyPrSPYAv---AKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGN 218 (345)
T COG1089 142 PQKETTPFYPRSPYAV---AKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGN 218 (345)
T ss_pred ccccCCCCCCCCHHHH---HHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEecc
Confidence 9999988888887765 455577888888888886666677777776642 3344444554444 567
Q ss_pred CCccccceehhHHHHHHHHHHhhcccC
Q psy17679 264 LNTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 264 ~~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
-+..+||-|..|.+++++.+++++.+.
T Consensus 219 ldAkRDWG~A~DYVe~mwlmLQq~~Pd 245 (345)
T COG1089 219 LDAKRDWGHAKDYVEAMWLMLQQEEPD 245 (345)
T ss_pred ccccccccchHHHHHHHHHHHccCCCC
Confidence 789999999999999999999987643
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.2e-20 Score=195.18 Aligned_cols=240 Identities=23% Similarity=0.264 Sum_probs=170.0
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcC-CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSC-PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g-~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
..++|+|||||||+|+++++.|++.+ .....|+++.|..+.....+++.+...... .+......+++++.+|++
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~i~~~~gDl~ 1044 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYG-----IWDEEWASRIEVVLGDLS 1044 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhC-----CCchhhhcceEEEeccCC
Confidence 35799999999999999999999886 123459999998765544444433222110 011122357999999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC--------
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP-------- 193 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~-------- 193 (303)
++.+|++...+..+..++|+|||+|+..+...++..+...|+.++.+++++|... ++++|+|+||..+...
T Consensus 1045 ~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vSS~~v~~~~~~~~~~~ 1123 (1389)
T TIGR03443 1045 KEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSSTSALDTEYYVNLSD 1123 (1389)
T ss_pred CccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEeCeeecCcccccchhh
Confidence 9999999988888888999999999998877777777778999999999999987 7889999999854421
Q ss_pred ------CCccccCCCCC--CCChhhHHHHHHHHHHHHHHhhCcCCc--EEeecceecCccC-----hHHHHHHHHhhhh-
Q psy17679 194 ------RERIDEEFYPV--PLKYENLIQLISETGDEELSEMTPNRV--HISGTGWIDNVYG-----PIGMLVGIATGVL- 257 (303)
Q Consensus 194 ------~~~~~E~~~~~--~~~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~~~~~g-----~~~~~~~~~~~~~- 257 (303)
...+.|+.... +..+...|..+|+.+|.++..+..... +++|||.+.+... ...++..+..+..
T Consensus 1124 ~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~ 1203 (1389)
T TIGR03443 1124 ELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQ 1203 (1389)
T ss_pred hhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHH
Confidence 11233332211 222345688999999999988765433 7888875533211 1234444444332
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...++.....++|+|++|+|++++.++.++.
T Consensus 1204 ~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~ 1234 (1389)
T TIGR03443 1204 LGLIPNINNTVNMVPVDHVARVVVAAALNPP 1234 (1389)
T ss_pred hCCcCCCCCccccccHHHHHHHHHHHHhCCc
Confidence 2233445667999999999999999987653
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.7e-20 Score=171.20 Aligned_cols=207 Identities=14% Similarity=0.115 Sum_probs=139.1
Q ss_pred cCCcEEEEe----CCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHH-----HHHHHHHHhHHHhhhhccCcCcCCc
Q psy17679 42 YRDKTIFLT----GGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQ-----ERLDAIFEDRLFWRLRAEVPDFRSK 112 (303)
Q Consensus 42 ~~~~~vlIt----GatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~-----~~l~~l~~~~~~~~~~~~~~~~~~~ 112 (303)
..+++|||| |||||+|++|++.|++.|++ |++++|+....... ....++. ..+
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~---V~~l~R~~~~~~~~~~~~~~~~~~l~---------------~~~ 111 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHE---VTLFTRGKEPSQKMKKEPFSRFSELS---------------SAG 111 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCE---EEEEecCCcchhhhccCchhhhhHhh---------------hcC
Confidence 445789999 99999999999999999987 99999986431100 0000110 135
Q ss_pred eEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC
Q psy17679 113 VSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC 192 (303)
Q Consensus 113 v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~ 192 (303)
++++.+|+.|.. +.. ...++|+|||+++. +..++.++++++++. +++||||+||.+++.
T Consensus 112 v~~v~~D~~d~~------~~~-~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~-gvkr~V~~SS~~vyg 170 (378)
T PLN00016 112 VKTVWGDPADVK------SKV-AGAGFDVVYDNNGK-------------DLDEVEPVADWAKSP-GLKQFLFCSSAGVYK 170 (378)
T ss_pred ceEEEecHHHHH------hhh-ccCCccEEEeCCCC-------------CHHHHHHHHHHHHHc-CCCEEEEEccHhhcC
Confidence 889999988622 111 22479999999763 234567899999988 899999999995543
Q ss_pred --CCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChH----HHHHHHHhhhhhhccCCCCc
Q psy17679 193 --PRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPI----GMLVGIATGVLHTHLINLNT 266 (303)
Q Consensus 193 --~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~ 266 (303)
...++.|.....|.. +|..+|.+++...- ..+++||+.+.+..... .++..+..+....+++.+.+
T Consensus 171 ~~~~~p~~E~~~~~p~~-------sK~~~E~~l~~~~l-~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~ 242 (378)
T PLN00016 171 KSDEPPHVEGDAVKPKA-------GHLEVEAYLQKLGV-NWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQ 242 (378)
T ss_pred CCCCCCCCCCCcCCCcc-------hHHHHHHHHHHcCC-CeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCe
Confidence 223455554333322 57788888875422 22788886553322111 13334445555556677888
Q ss_pred cccceehhHHHHHHHHHHhhcccCCcchh
Q psy17679 267 VTDMVPVDLVVNSMISIAWSIGESGKVEK 295 (303)
Q Consensus 267 ~~~~i~v~D~a~ai~~~~~~~~~~~~~~~ 295 (303)
.++|+|++|+|++++.++.++...+..++
T Consensus 243 ~~~~i~v~Dva~ai~~~l~~~~~~~~~yn 271 (378)
T PLN00016 243 LTQLGHVKDLASMFALVVGNPKAAGQIFN 271 (378)
T ss_pred eeceecHHHHHHHHHHHhcCccccCCEEE
Confidence 99999999999999999987654444443
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.8e-19 Score=160.63 Aligned_cols=210 Identities=20% Similarity=0.174 Sum_probs=142.7
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGL 125 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~ 125 (303)
+||||||||++|+++++.|++.|++ |+++.|...... +.+... ....++.++.+|+.+.+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~---V~~~~~~~~~~~--~~~~~~--------------~~~~~~~~~~~D~~~~~- 60 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHE---VVVLDNLSNGSP--EALKRG--------------ERITRVTFVEGDLRDRE- 60 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCe---EEEEeCCCccch--hhhhhh--------------ccccceEEEECCCCCHH-
Confidence 5899999999999999999999987 777765432211 111000 00025778899999877
Q ss_pred CCCHHHHHHHhc--cccEEEEcceecccc---ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCCccc
Q psy17679 126 GLSETDRATLVK--QVNIVFHGAATVRFD---EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRERID 198 (303)
Q Consensus 126 ~~~~~~~~~~~~--~~dvVi~~a~~~~~~---~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~~~~ 198 (303)
.+..+++ ++|+|||+||..... ......++.|+.++..+++++.+. ++++||++||.+... ...+++
T Consensus 61 -----~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ss~~~~g~~~~~~~~ 134 (328)
T TIGR01179 61 -----LLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSSSAAVYGEPSSIPIS 134 (328)
T ss_pred -----HHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEecchhhcCCCCCCCcc
Confidence 6777775 799999999975432 234567788999999999999987 788999999984433 333566
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHHHHhhCcC-Cc---EEeecceecCccChH-------------HHHH---HHHhhh--
Q psy17679 199 EEFYPVPLKYENLIQLISETGDEELSEMTPN-RV---HISGTGWIDNVYGPI-------------GMLV---GIATGV-- 256 (303)
Q Consensus 199 E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~-~~---~ii~pg~~~~~~g~~-------------~~~~---~~~~~~-- 256 (303)
|+.... +...|..+|..+|.+++.+... .. +++||+. +||+. .++. ....+.
T Consensus 135 e~~~~~---~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~---v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (328)
T TIGR01179 135 EDSPLG---PINPYGRSKLMSERILRDLSKADPGLSYVILRYFN---VAGADPEGTIGEDPPGITHLIPYACQVAVGKRD 208 (328)
T ss_pred ccCCCC---CCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCc---ccCCCCCCccccCCcccchHHHHHHHHHHhCCC
Confidence 665433 4456777888899988877543 22 7888753 34431 1221 111111
Q ss_pred hhhc------cCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 257 LHTH------LINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 257 ~~~~------~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...+ .+.+...++|||++|+|++++.++...
T Consensus 209 ~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~ 245 (328)
T TIGR01179 209 KLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYL 245 (328)
T ss_pred CeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhh
Confidence 1111 124567789999999999999998753
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-19 Score=159.34 Aligned_cols=186 Identities=15% Similarity=0.090 Sum_probs=120.5
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
..|+||||||+||||++|++.|+++|++ |+...+ |+.+
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~---V~~~~~---------------------------------------~~~~ 45 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGID---FHYGSG---------------------------------------RLEN 45 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCE---EEEecC---------------------------------------ccCC
Confidence 3478999999999999999999999987 543221 1112
Q ss_pred CCCCCCHHHHHHHhc--cccEEEEcceeccc------cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC--cccC
Q psy17679 123 PGLGLSETDRATLVK--QVNIVFHGAATVRF------DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA--FTHC 192 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~------~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~--~~~~ 192 (303)
.. .+...+. ++|+|||+||.... ..+....+++|+.++.+++++|++. ++++ +++||. |+..
T Consensus 46 ~~------~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~~-v~~sS~~vy~~~ 117 (298)
T PLN02778 46 RA------SLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLVL-TNYATGCIFEYD 117 (298)
T ss_pred HH------HHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCE-EEEecceEeCCC
Confidence 11 2333333 78999999998642 2345678899999999999999998 7765 455554 4433
Q ss_pred C------CCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecC--ccChHHHHHHHHhhhhhhccCCC
Q psy17679 193 P------RERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDN--VYGPIGMLVGIATGVLHTHLINL 264 (303)
Q Consensus 193 ~------~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~--~~g~~~~~~~~~~~~~~~~~~~~ 264 (303)
. ..+++|++.. ..+.+.|..+|.++|.++..+...+ ++++++..+ ...+..++..+..+......
T Consensus 118 ~~~p~~~~~~~~Ee~~p--~~~~s~Yg~sK~~~E~~~~~y~~~~--~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~--- 190 (298)
T PLN02778 118 DAHPLGSGIGFKEEDTP--NFTGSFYSKTKAMVEELLKNYENVC--TLRVRMPISSDLSNPRNFITKITRYEKVVNI--- 190 (298)
T ss_pred CCCCcccCCCCCcCCCC--CCCCCchHHHHHHHHHHHHHhhccE--EeeecccCCcccccHHHHHHHHHcCCCeeEc---
Confidence 2 1135655432 2233568888999999998876543 444432111 11123344444444322222
Q ss_pred CccccceehhHHHHHHHHHHhhc
Q psy17679 265 NTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 265 ~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
..+|+|++|++++++.++...
T Consensus 191 --~~s~~yv~D~v~al~~~l~~~ 211 (298)
T PLN02778 191 --PNSMTILDELLPISIEMAKRN 211 (298)
T ss_pred --CCCCEEHHHHHHHHHHHHhCC
Confidence 137999999999999998643
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.7e-19 Score=155.87 Aligned_cols=201 Identities=16% Similarity=0.156 Sum_probs=126.8
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLG 126 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~ 126 (303)
|||||||||||+++++.|++.|++ |++++|+....... .... ..|+.. .
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~-----------------------~~~~--~~~~~~-~-- 49 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHE---VTILTRSPPAGANT-----------------------KWEG--YKPWAP-L-- 49 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCE---EEEEeCCCCCCCcc-----------------------ccee--eecccc-c--
Confidence 699999999999999999999987 99999986532100 0000 112221 1
Q ss_pred CCHHHHHHHhccccEEEEcceeccccc-----cHHHHHhhhHHHHHHHHHHHHhcCCCc--eEEEEeCC--cccCCCCcc
Q psy17679 127 LSETDRATLVKQVNIVFHGAATVRFDE-----HIKMAVKINVCGVQAMLQLAREMKDLK--AFVHVSTA--FTHCPRERI 197 (303)
Q Consensus 127 ~~~~~~~~~~~~~dvVi~~a~~~~~~~-----~~~~~~~~N~~~~~~ll~~a~~~~~~~--r~i~iSS~--~~~~~~~~~ 197 (303)
.+...+.++|+|||+|+...... ....++++|+.++.++++++... +++ +||+.||. |+.....++
T Consensus 50 ----~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S~~~~yg~~~~~~~ 124 (292)
T TIGR01777 50 ----AESEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISASAVGYYGTSEDRVF 124 (292)
T ss_pred ----chhhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEeeeEEEeCCCCCCCc
Confidence 34566789999999999754321 23567789999999999999998 653 56666665 443334466
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc--EEeecceecCccChHH-HHHH---HHhhhhhhccCCCCccccce
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPNRV--HISGTGWIDNVYGPIG-MLVG---IATGVLHTHLINLNTVTDMV 271 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~~~~~g~~~-~~~~---~~~~~~~~~~~~~~~~~~~i 271 (303)
+|+....+.+.+ ...+...|.....+..... +++||+. +|||.. .... .........++.++..++||
T Consensus 125 ~E~~~~~~~~~~---~~~~~~~e~~~~~~~~~~~~~~ilR~~~---v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i 198 (292)
T TIGR01777 125 TEEDSPAGDDFL---AELCRDWEEAAQAAEDLGTRVVLLRTGI---VLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWI 198 (292)
T ss_pred CcccCCCCCChH---HHHHHHHHHHhhhchhcCCceEEEeeee---EECCCcchhHHHHHHHhcCcccccCCCCcccccE
Confidence 776533333322 2223333554443332222 7888864 455532 1111 11111112256678899999
Q ss_pred ehhHHHHHHHHHHhhccc
Q psy17679 272 PVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 272 ~v~D~a~ai~~~~~~~~~ 289 (303)
|++|+|+++..++.++..
T Consensus 199 ~v~Dva~~i~~~l~~~~~ 216 (292)
T TIGR01777 199 HIEDLVQLILFALENASI 216 (292)
T ss_pred eHHHHHHHHHHHhcCccc
Confidence 999999999999987543
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.8e-19 Score=176.04 Aligned_cols=173 Identities=15% Similarity=0.142 Sum_probs=129.1
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|+||||+||+|+++++.|++.|++ |++++|+.... ...++.++.+|+.+.+
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~---Vv~l~R~~~~~------------------------~~~~v~~v~gDL~D~~ 53 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHE---VVGIARHRPDS------------------------WPSSADFIAADIRDAT 53 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCE---EEEEECCchhh------------------------cccCceEEEeeCCCHH
Confidence 57999999999999999999999987 88899864210 0136789999999976
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCCCCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPV 204 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~~~ 204 (303)
.+..+++++|+|||+|+.... .+++|+.++.++++++.+. ++++||++||..
T Consensus 54 ------~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~~--------------- 105 (854)
T PRK05865 54 ------AVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET-GTGRIVFTSSGH--------------- 105 (854)
T ss_pred ------HHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc-CCCeEEEECCcH---------------
Confidence 688888999999999986432 4678999999999999998 889999999963
Q ss_pred CCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHH--HHHHHHhhhhhhccCCCCccccceehhHHHHHHHH
Q psy17679 205 PLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIG--MLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMIS 282 (303)
Q Consensus 205 ~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~ 282 (303)
|..+|+++..+. -..+++||+ ++|||+. ++..+. .......+.+...++|||++|+|++++.
T Consensus 106 -----------K~aaE~ll~~~g-l~~vILRp~---~VYGP~~~~~i~~ll-~~~v~~~G~~~~~~dfIhVdDVA~Ai~~ 169 (854)
T PRK05865 106 -----------QPRVEQMLADCG-LEWVAVRCA---LIFGRNVDNWVQRLF-ALPVLPAGYADRVVQVVHSDDAQRLLVR 169 (854)
T ss_pred -----------HHHHHHHHHHcC-CCEEEEEec---eEeCCChHHHHHHHh-cCceeccCCCCceEeeeeHHHHHHHHHH
Confidence 556787776532 112788874 6677752 222222 1111122344556799999999999999
Q ss_pred HHhhcc
Q psy17679 283 IAWSIG 288 (303)
Q Consensus 283 ~~~~~~ 288 (303)
++.++.
T Consensus 170 aL~~~~ 175 (854)
T PRK05865 170 ALLDTV 175 (854)
T ss_pred HHhCCC
Confidence 987543
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.6e-19 Score=153.56 Aligned_cols=209 Identities=15% Similarity=0.124 Sum_probs=133.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|++|+++++.|++.|++ |++++|++.... +..+.+.. ...++.++++|++
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~---v~~~~r~~~~~~--~~~~~~~~-------------~~~~~~~~~~Dl~ 66 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAA---VAIADLNQDGAN--AVADEINK-------------AGGKAIGVAMDVT 66 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEeCChHHHH--HHHHHHHh-------------cCceEEEEECCCC
Confidence 56789999999999999999999999997 888898753211 11111111 1246788999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHH----HHHHHHHH-HhcCCCceE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCG----VQAMLQLA-REMKDLKAF 182 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~----~~~ll~~a-~~~~~~~r~ 182 (303)
+.+ .+..+++ .+|+||||||.... ...+...+++|+.+ +..+++.+ +.. +.++|
T Consensus 67 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~~~i 139 (262)
T PRK13394 67 NED------AVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-RGGVV 139 (262)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CCcEE
Confidence 976 4544443 48999999997532 22345678899999 55556666 444 67899
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHh--
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIAT-- 254 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~-- 254 (303)
|++||.++... ......|..+|...+.+.+.++... . ++++||.+.+..-. ..+.....
T Consensus 140 v~~ss~~~~~~------------~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~-~~~~~~~~~~ 206 (262)
T PRK13394 140 IYMGSVHSHEA------------SPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVD-KQIPEQAKEL 206 (262)
T ss_pred EEEcchhhcCC------------CCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhh-hhhHhhhhcc
Confidence 99999855421 1122345556666666666554332 2 68888855332211 11111111
Q ss_pred -----hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 -----GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 -----~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....+++.+....+|++++|++++++.++..+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~ 245 (262)
T PRK13394 207 GISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPS 245 (262)
T ss_pred CCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccc
Confidence 1112234344556789999999999999987653
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=147.48 Aligned_cols=212 Identities=17% Similarity=0.182 Sum_probs=135.2
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLG 126 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~ 126 (303)
|+|||||||||++|+..|.+.||+ |++++|+++..... ....+. ..+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~---v~iltR~~~~~~~~---------------------~~~~v~--~~~------- 47 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQ---VTILTRRPPKASQN---------------------LHPNVT--LWE------- 47 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCe---EEEEEcCCcchhhh---------------------cCcccc--ccc-------
Confidence 689999999999999999999998 99999987643210 001111 111
Q ss_pred CCHHHHHHHhc-cccEEEEcceeccccc-----cHHHHHhhhHHHHHHHHHHHHhcC-CCceEEEEeCC--cccCCCCcc
Q psy17679 127 LSETDRATLVK-QVNIVFHGAATVRFDE-----HIKMAVKINVCGVQAMLQLAREMK-DLKAFVHVSTA--FTHCPRERI 197 (303)
Q Consensus 127 ~~~~~~~~~~~-~~dvVi~~a~~~~~~~-----~~~~~~~~N~~~~~~ll~~a~~~~-~~~r~i~iSS~--~~~~~~~~~ 197 (303)
.+..... ++|+|||.||..=... ..+.+.+..+..|..|.++..... +++.||.-|.. |++.....+
T Consensus 48 ----~~~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~ 123 (297)
T COG1090 48 ----GLADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVV 123 (297)
T ss_pred ----hhhhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceee
Confidence 2344444 7999999999754433 235677888899999999998662 34444444444 777777788
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc--EEeecceecCccCh-HHHHHHH---HhhhhhhccCCCCccccce
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPNRV--HISGTGWIDNVYGP-IGMLVGI---ATGVLHTHLINLNTVTDMV 271 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~~~~~g~-~~~~~~~---~~~~~~~~~~~~~~~~~~i 271 (303)
+|+. .+.+.+..--+..| |+.......... .++|.| .+.++ +..+..+ .+-..-.-+|+|.+.++||
T Consensus 124 tE~~--~~g~~Fla~lc~~W--E~~a~~a~~~gtRvvllRtG---vVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWI 196 (297)
T COG1090 124 TEES--PPGDDFLAQLCQDW--EEEALQAQQLGTRVVLLRTG---VVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWI 196 (297)
T ss_pred ecCC--CCCCChHHHHHHHH--HHHHhhhhhcCceEEEEEEE---EEecCCCcchhhhcchhhhccCCccCCCCceeeee
Confidence 8883 33333433334445 444444433332 444443 33332 1122211 1111112368999999999
Q ss_pred ehhHHHHHHHHHHhhcccCCcchhh-cccccC
Q psy17679 272 PVDLVVNSMISIAWSIGESGKVEKA-INKIEN 302 (303)
Q Consensus 272 ~v~D~a~ai~~~~~~~~~~~~~~~~-~~~~~~ 302 (303)
|++|++++|.+++.++.-.++++=. .|+|.|
T Consensus 197 hieD~v~~I~fll~~~~lsGp~N~taP~PV~~ 228 (297)
T COG1090 197 HIEDLVNAILFLLENEQLSGPFNLTAPNPVRN 228 (297)
T ss_pred eHHHHHHHHHHHHhCcCCCCcccccCCCcCcH
Confidence 9999999999999998888876633 555543
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.5e-18 Score=148.49 Aligned_cols=212 Identities=17% Similarity=0.130 Sum_probs=136.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
.++|+|+||||||++|+.++++|++.|++ |+++.|+.+.. ..++. ...++.++.+|++
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~---V~~~~R~~~~~------~~~~~-------------~~~~~~~~~~Dl~ 72 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFA---VKAGVRDVDKA------KTSLP-------------QDPSLQIVRADVT 72 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCE---EEEEecCHHHH------HHhcc-------------cCCceEEEEeeCC
Confidence 45689999999999999999999999987 88999975321 11100 0146889999999
Q ss_pred CCCCCCCHHHHHHHh-ccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccC
Q psy17679 122 LPGLGLSETDRATLV-KQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEE 200 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~ 200 (303)
+.. ..+.+.+ .++|+|||+++...... ....+++|+.++.++++++... +++|||++||..+..........
T Consensus 73 d~~-----~~l~~~~~~~~d~vi~~~g~~~~~~-~~~~~~~n~~~~~~ll~a~~~~-~~~~iV~iSS~~v~g~~~~~~~~ 145 (251)
T PLN00141 73 EGS-----DKLVEAIGDDSDAVICATGFRRSFD-PFAPWKVDNFGTVNLVEACRKA-GVTRFILVSSILVNGAAMGQILN 145 (251)
T ss_pred CCH-----HHHHHHhhcCCCEEEECCCCCcCCC-CCCceeeehHHHHHHHHHHHHc-CCCEEEEEccccccCCCcccccC
Confidence 842 1566666 58999999998642211 1223567889999999999987 88999999999544321110000
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHH
Q psy17679 201 FYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSM 280 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai 280 (303)
....+..++..+...|..+|++++... -..++++||++.+... .+.. ...........+|+.+|+|+++
T Consensus 146 ~~~~~~~~~~~~~~~k~~~e~~l~~~g-i~~~iirpg~~~~~~~---------~~~~-~~~~~~~~~~~~i~~~dvA~~~ 214 (251)
T PLN00141 146 PAYIFLNLFGLTLVAKLQAEKYIRKSG-INYTIVRPGGLTNDPP---------TGNI-VMEPEDTLYEGSISRDQVAEVA 214 (251)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECCCccCCCC---------CceE-EECCCCccccCcccHHHHHHHH
Confidence 001112334445556777787766432 2228999987643210 1111 1111111223579999999999
Q ss_pred HHHHhhcccCCcc
Q psy17679 281 ISIAWSIGESGKV 293 (303)
Q Consensus 281 ~~~~~~~~~~~~~ 293 (303)
+.++.++......
T Consensus 215 ~~~~~~~~~~~~~ 227 (251)
T PLN00141 215 VEALLCPESSYKV 227 (251)
T ss_pred HHHhcChhhcCcE
Confidence 9999877654443
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.9e-18 Score=140.33 Aligned_cols=182 Identities=19% Similarity=0.193 Sum_probs=130.9
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLG 126 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~ 126 (303)
|+|+||||++|+.++++|+++|++ |++++|++++... ..+++++.+|+.|++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~---V~~~~R~~~~~~~-----------------------~~~~~~~~~d~~d~~-- 52 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHE---VTALVRSPSKAED-----------------------SPGVEIIQGDLFDPD-- 52 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSE---EEEEESSGGGHHH-----------------------CTTEEEEESCTTCHH--
T ss_pred eEEECCCChHHHHHHHHHHHCCCE---EEEEecCchhccc-----------------------ccccccceeeehhhh--
Confidence 799999999999999999999976 9999998653210 279999999999976
Q ss_pred CCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCc-cccCCCCCC
Q psy17679 127 LSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRER-IDEEFYPVP 205 (303)
Q Consensus 127 ~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~-~~E~~~~~~ 205 (303)
.+..+++++|+||++++.... +.....+++++++.. +++|+|++||.+....... ... ..
T Consensus 53 ----~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~~~~~~~~~----~~ 113 (183)
T PF13460_consen 53 ----SVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKKA-GVKRVVYLSSAGVYRDPPGLFSD----ED 113 (183)
T ss_dssp ----HHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHHT-TSSEEEEEEETTGTTTCTSEEEG----GT
T ss_pred ----hhhhhhhhcchhhhhhhhhcc----------ccccccccccccccc-ccccceeeeccccCCCCCccccc----cc
Confidence 799999999999999986433 155668899999998 8999999999965543221 111 01
Q ss_pred CChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHh
Q psy17679 206 LKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAW 285 (303)
Q Consensus 206 ~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~ 285 (303)
...+..|...+...|+.++.. ....++++|+++.+.... ... .....+....++|+.+|+|++++.+++
T Consensus 114 ~~~~~~~~~~~~~~e~~~~~~-~~~~~ivrp~~~~~~~~~--------~~~--~~~~~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 114 KPIFPEYARDKREAEEALRES-GLNWTIVRPGWIYGNPSR--------SYR--LIKEGGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp CGGGHHHHHHHHHHHHHHHHS-TSEEEEEEESEEEBTTSS--------SEE--EESSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred ccchhhhHHHHHHHHHHHHhc-CCCEEEEECcEeEeCCCc--------cee--EEeccCCCCcCcCCHHHHHHHHHHHhC
Confidence 112245556677778888643 223389999876433211 111 111134566799999999999999986
Q ss_pred h
Q psy17679 286 S 286 (303)
Q Consensus 286 ~ 286 (303)
+
T Consensus 183 ~ 183 (183)
T PF13460_consen 183 N 183 (183)
T ss_dssp -
T ss_pred C
Confidence 4
|
... |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.7e-18 Score=151.17 Aligned_cols=204 Identities=18% Similarity=0.160 Sum_probs=135.2
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
.|++|||||+|+||+++++.|++.|+. |+++.|+.. .++.+... ...++.++.+|+++.
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~---v~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~~~ 60 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDR---VAATVRRPD------ALDDLKAR------------YGDRLWVLQLDVTDS 60 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHh------------ccCceEEEEccCCCH
Confidence 368999999999999999999999987 888898742 22222111 014788999999997
Q ss_pred CCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEEEE
Q psy17679 124 GLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFVHV 185 (303)
Q Consensus 124 ~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i~i 185 (303)
+ ++.+++ .++|+|||+||.... ...+...+++|+.++.++++++. +. +.++||++
T Consensus 61 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~ 133 (276)
T PRK06482 61 A------AVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-GGGRIVQV 133 (276)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEE
Confidence 6 444443 358999999997542 12345678899999999999973 33 66899999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHH-------HHH
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGML-------VGI 252 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~-------~~~ 252 (303)
||..+.. +......|..+|...|.+.+.+... .. ++++||.+.+.+++.... ...
T Consensus 134 sS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~ 201 (276)
T PRK06482 134 SSEGGQI------------AYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDT 201 (276)
T ss_pred cCccccc------------CCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccch
Confidence 9985432 1123456778888888888766543 22 788899776666543110 000
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...........+.. .-+.+++|++++++.++..+.
T Consensus 202 ~~~~~~~~~~~~~~-~~~~d~~~~~~a~~~~~~~~~ 236 (276)
T PRK06482 202 PVGDLRRALADGSF-AIPGDPQKMVQAMIASADQTP 236 (276)
T ss_pred hhHHHHHHHhhccC-CCCCCHHHHHHHHHHHHcCCC
Confidence 00000011111111 114689999999999987553
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.1e-18 Score=147.05 Aligned_cols=209 Identities=14% Similarity=0.109 Sum_probs=131.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++|+||||+|++|.+++++|++.|++ |++++|++.... ....++.. ...++.++.+|++
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~---v~~~~r~~~~~~--~~~~~~~~-------------~~~~~~~~~~Dl~ 63 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAK---VVIADLNDEAAA--AAAEALQK-------------AGGKAIGVAMDVT 63 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCCHHHHH--HHHHHHHh-------------cCCcEEEEEcCCC
Confidence 45689999999999999999999999987 889999754221 11111111 1257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceecccc-------ccHHHHHhhhHHHHHHHHHHH----HhcCCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRFD-------EHIKMAVKINVCGVQAMLQLA----REMKDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~-------~~~~~~~~~N~~~~~~ll~~a----~~~~~~~r~i 183 (303)
+.+ ++..+++ .+|+|||+|+..... ..++..+++|+.++..+++.+ .+. +.++||
T Consensus 64 ~~~------~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv 136 (258)
T PRK12429 64 DEE------AINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-GGGRII 136 (258)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCeEEE
Confidence 877 4544444 689999999975331 234567788999865555554 444 678999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHh--h
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIAT--G 255 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~--~ 255 (303)
++||..+... ...++.|..+|...+.+.+.+...+ . ++++||++.+..... .+..... +
T Consensus 137 ~iss~~~~~~------------~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~-~~~~~~~~~~ 203 (258)
T PRK12429 137 NMASVHGLVG------------SAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRK-QIPDLAKERG 203 (258)
T ss_pred EEcchhhccC------------CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhh-hhhhhccccC
Confidence 9999855432 1123445555655666655443322 2 678888664332111 1111110 0
Q ss_pred -----hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 -----VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 -----~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....+........|++++|+|++++.++....
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~ 241 (258)
T PRK12429 204 ISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAA 241 (258)
T ss_pred CChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCccc
Confidence 001122223344679999999999999987643
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.9e-17 Score=152.51 Aligned_cols=229 Identities=16% Similarity=0.113 Sum_probs=142.0
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+..++++||||||+|+||++++++|++.|++ |++++|+.... +.+........+.........++.++.+|
T Consensus 76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~---Vval~Rn~ekl------~~l~~~l~~~~L~~~Ga~~~~~v~iV~gD 146 (576)
T PLN03209 76 DTKDEDLAFVAGATGKVGSRTVRELLKLGFR---VRAGVRSAQRA------ESLVQSVKQMKLDVEGTQPVEKLEIVECD 146 (576)
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCe---EEEEeCCHHHH------HHHHHHhhhhccccccccccCceEEEEec
Confidence 3456789999999999999999999999987 88999975321 11111000000000000011468899999
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcceecccc-ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccc
Q psy17679 120 CSLPGLGLSETDRATLVKQVNIVFHGAATVRFD-EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERID 198 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~-~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~ 198 (303)
+.+.+ ++..++.++|+|||++|..... .++...+++|+.++.++++++... +++|||++||.++.... ..
T Consensus 147 LtD~e------sI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSiga~~~g--~p 217 (576)
T PLN03209 147 LEKPD------QIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLGTNKVG--FP 217 (576)
T ss_pred CCCHH------HHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccchhcccC--cc
Confidence 99876 6788889999999999975321 234566788999999999999988 88999999999653111 11
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHH
Q psy17679 199 EEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVN 278 (303)
Q Consensus 199 E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ 278 (303)
.. .......|...|..+|.++....- ..++++||++.+...... ..+.. ...........++...|+|+
T Consensus 218 ~~----~~~sk~~~~~~KraaE~~L~~sGI-rvTIVRPG~L~tp~d~~~-----~t~~v-~~~~~d~~~gr~isreDVA~ 286 (576)
T PLN03209 218 AA----ILNLFWGVLCWKRKAEEALIASGL-PYTIVRPGGMERPTDAYK-----ETHNL-TLSEEDTLFGGQVSNLQVAE 286 (576)
T ss_pred cc----chhhHHHHHHHHHHHHHHHHHcCC-CEEEEECCeecCCccccc-----cccce-eeccccccCCCccCHHHHHH
Confidence 10 111233344456666776654321 128999997743211000 00111 11111111123588999999
Q ss_pred HHHHHHhhcc-cCCcchhhc
Q psy17679 279 SMISIAWSIG-ESGKVEKAI 297 (303)
Q Consensus 279 ai~~~~~~~~-~~~~~~~~~ 297 (303)
++++++.++. ....+..++
T Consensus 287 vVvfLasd~~as~~kvvevi 306 (576)
T PLN03209 287 LMACMAKNRRLSYCKVVEVI 306 (576)
T ss_pred HHHHHHcCchhccceEEEEE
Confidence 9999998664 444444443
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.4e-17 Score=135.72 Aligned_cols=210 Identities=11% Similarity=0.093 Sum_probs=144.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|.++|||||++||.++++.|.+.|+. |++..|.. ++|+++.... .. ..+.++..|++
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~---vvl~aRR~------drL~~la~~~---------~~--~~~~~~~~DVt 63 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAK---VVLAARRE------ERLEALADEI---------GA--GAALALALDVT 63 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCe---EEEEeccH------HHHHHHHHhh---------cc--CceEEEeeccC
Confidence 45689999999999999999999999998 99999974 4555544321 00 36889999999
Q ss_pred CCCCCCCHHHHHHH-------hccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATL-------VKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~-------~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
|.+ ++..+ +.++|++|||||.... ..+|...+++|+.|..+..++..+. ++..+||+
T Consensus 64 D~~------~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN 137 (246)
T COG4221 64 DRA------AVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIIN 137 (246)
T ss_pred CHH------HHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEE
Confidence 986 33322 3379999999998543 2456788999999999998888654 35569999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeeccee-cCccChHHHHHHHHhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWI-DNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~-~~~~g~~~~~~~~~~~~~ 257 (303)
+||..+.. |......|..+|+....+...+..... +.+.||.+ ...+...++-. -....
T Consensus 138 ~~SiAG~~------------~y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g--~~~~~ 203 (246)
T COG4221 138 LGSIAGRY------------PYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEG--DDERA 203 (246)
T ss_pred eccccccc------------cCCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCc--hhhhH
Confidence 99997653 333345677777777777766654442 67779876 33332211110 00011
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcccCCcchh
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIGESGKVEK 295 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~~~ 295 (303)
..++ .....+..+|+|+++++++..|..-..-+.
T Consensus 204 ~~~y----~~~~~l~p~dIA~~V~~~~~~P~~vnI~ei 237 (246)
T COG4221 204 DKVY----KGGTALTPEDIAEAVLFAATQPQHVNINEI 237 (246)
T ss_pred HHHh----ccCCCCCHHHHHHHHHHHHhCCCccccceE
Confidence 1111 223468999999999999999976654443
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.5e-17 Score=144.92 Aligned_cols=208 Identities=11% Similarity=0.095 Sum_probs=135.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||++++++|+++|+. |++++|+... ++++... +. ....++.++.+|++
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~---V~~~~r~~~~------~~~~~~~-----~~----~~~~~~~~~~~Dl~ 69 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFP---VALGARRVEK------CEELVDK-----IR----ADGGEAVAFPLDVT 69 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHH------HHHHHHH-----HH----hcCCeEEEEECCCC
Confidence 56689999999999999999999999987 8888886421 1111110 00 01146778899999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++..+++ ++|+|||+||.... ...+...+++|+.++.++++.+.+. .+..+||+
T Consensus 70 ~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~ 143 (274)
T PRK07775 70 DPD------SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIF 143 (274)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEE
Confidence 876 4544443 67999999997532 1234566789999999998887532 14568999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH---HHHHHHHhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI---GMLVGIATG 255 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~---~~~~~~~~~ 255 (303)
+||..+... ......|..+|...+.+.+.+...+ . ++++||.+....+.. .........
T Consensus 144 isS~~~~~~------------~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~ 211 (274)
T PRK07775 144 VGSDVALRQ------------RPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLED 211 (274)
T ss_pred ECChHhcCC------------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHH
Confidence 999855432 1123457777888888887765332 2 788898664433221 111111111
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. ..++ +.....+++++|+|++++.++.++.
T Consensus 212 ~--~~~~-~~~~~~~~~~~dva~a~~~~~~~~~ 241 (274)
T PRK07775 212 W--AKWG-QARHDYFLRASDLARAITFVAETPR 241 (274)
T ss_pred H--HHhc-ccccccccCHHHHHHHHHHHhcCCC
Confidence 1 1111 2224568999999999999998763
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-17 Score=146.61 Aligned_cols=164 Identities=10% Similarity=0.055 Sum_probs=111.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
++++++|||||+|+||+++++.|+++|+. |++++|+.... .+..+++.. ...++.++.+|++
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~-------------~~~~~~~~~~D~~ 65 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMK---LVLADVQQDAL--DRAVAELRA-------------QGAEVLGVRTDVS 65 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCE---EEEEeCChHHH--HHHHHHHHh-------------cCCeEEEEECCCC
Confidence 56789999999999999999999999987 88888864311 111111111 0246788999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCC-----
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKD----- 178 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~----- 178 (303)
|.+ ++..+++ .+|+|||+||.... ...+...+++|+.++.++++++. +...
T Consensus 66 d~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~ 139 (287)
T PRK06194 66 DAA------QVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAY 139 (287)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 876 5555554 57999999998543 13345678899999988777753 3311
Q ss_pred CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc--------EEeecceecC
Q psy17679 179 LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV--------HISGTGWIDN 241 (303)
Q Consensus 179 ~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--------~ii~pg~~~~ 241 (303)
..++|++||.++.... .....|..+|...+.+.+.+...+. ..+.||++.+
T Consensus 140 ~g~iv~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t 198 (287)
T PRK06194 140 EGHIVNTASMAGLLAP------------PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPT 198 (287)
T ss_pred CeEEEEeCChhhccCC------------CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccC
Confidence 1589999998654321 1234577778888888776644322 4566776543
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.1e-17 Score=140.15 Aligned_cols=205 Identities=12% Similarity=0.117 Sum_probs=134.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+||||||||++|+++++.|+++|++ |+++.|.... ..+.+.+... ....++.++.+|+.
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~---v~~~~~~~~~--~~~~~~~~~~------------~~~~~~~~~~~D~~ 66 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGAD---VVVHYRSDEE--AAEELVEAVE------------ALGRRAQAVQADVT 66 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeCCCHH--HHHHHHHHHH------------hcCCceEEEECCcC
Confidence 45689999999999999999999999997 7777776432 1122211111 01256889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i 183 (303)
+.+ .+.++++ ++|+|||+||.... ...+...+++|+.+..++++.+. +. +.++||
T Consensus 67 ~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~i 139 (249)
T PRK12825 67 DKA------ALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-RGGRIV 139 (249)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEE
Confidence 876 4555443 67999999996432 12345678899999999988874 34 678999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+... ......|..+|...+.+.+.++.. .. ++++||++.+...............
T Consensus 140 ~~SS~~~~~~------------~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~- 206 (249)
T PRK12825 140 NISSVAGLPG------------WPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKD- 206 (249)
T ss_pred EECccccCCC------------CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhh-
Confidence 9999865422 123445667777777777655433 22 7888987654432221111111110
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. ......+++.+|+++++.+++.+..
T Consensus 207 -~----~~~~~~~~~~~dva~~~~~~~~~~~ 232 (249)
T PRK12825 207 -A----ETPLGRSGTPEDIARAVAFLCSDAS 232 (249)
T ss_pred -c----cCCCCCCcCHHHHHHHHHHHhCccc
Confidence 0 1112238999999999999997653
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.7e-17 Score=144.55 Aligned_cols=202 Identities=10% Similarity=0.125 Sum_probs=130.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|++|+++||||+|++|+++++.|++.|++ |++++|+.+ +++++.. .++.++.+|++
T Consensus 1 ~~~k~vlItGasggiG~~la~~l~~~G~~---V~~~~r~~~------~l~~~~~---------------~~~~~~~~Dv~ 56 (273)
T PRK06182 1 MQKKVALVTGASSGIGKATARRLAAQGYT---VYGAARRVD------KMEDLAS---------------LGVHPLSLDVT 56 (273)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHh---------------CCCeEEEeeCC
Confidence 35689999999999999999999999987 888998743 2222211 35788999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHH----HHHhcCCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQ----LAREMKDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~----~a~~~~~~~r~i 183 (303)
+.+ ++..+++ ++|++||+||.... ...+...+++|+.+...+++ .+++. +..+||
T Consensus 57 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv 129 (273)
T PRK06182 57 DEA------SIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-RSGRII 129 (273)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-CCCEEE
Confidence 976 4555544 78999999997542 12456788899988655554 44444 567999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCc----CCc--EEeecceecCccChHHHHHHHHh---
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTP----NRV--HISGTGWIDNVYGPIGMLVGIAT--- 254 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~----~~~--~ii~pg~~~~~~g~~~~~~~~~~--- 254 (303)
++||.++... ......|..+|...+.+.+.+.. ... ++++||++.+.+..... .....
T Consensus 130 ~isS~~~~~~------------~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~ 196 (273)
T PRK06182 130 NISSMGGKIY------------TPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAA-DHLLKTSG 196 (273)
T ss_pred EEcchhhcCC------------CCCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhh-hhhccccc
Confidence 9999865321 11223467777777777654432 222 78889977554321100 00000
Q ss_pred hh--------hhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 255 GV--------LHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 255 ~~--------~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+. ....+........+...+|+|++++.++...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~ 237 (273)
T PRK06182 197 NGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTAR 237 (273)
T ss_pred ccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhCC
Confidence 00 0000111112334679999999999999864
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.6e-17 Score=142.79 Aligned_cols=204 Identities=13% Similarity=0.135 Sum_probs=130.2
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
++++|||||+|++|+++++.|+++|++ |++++|++.. .+.+.+.+.. ...++.++.+|+.+.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~---v~~~~r~~~~---~~~~~~~~~~------------~~~~~~~~~~D~~~~ 62 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGAN---VVVNDLGEAG---AEAAAKVATD------------AGGSVIYLVADVTKE 62 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh------------cCCceEEEECCCCCH
Confidence 368999999999999999999999987 9999997432 1122211110 014688999999997
Q ss_pred CCCCCHHHHHHH-------hccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEEEE
Q psy17679 124 GLGLSETDRATL-------VKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFVHV 185 (303)
Q Consensus 124 ~~~~~~~~~~~~-------~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i~i 185 (303)
+ ++..+ +..+|+|||+++.... ...++..+..|+.++..+++.+. +. +.++||++
T Consensus 63 ~------~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~~v~~ 135 (255)
T TIGR01963 63 D------EIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-GWGRIINI 135 (255)
T ss_pred H------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEE
Confidence 6 33333 3468999999997542 12245677889999888887764 34 67899999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHH--HHHHHHhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIG--MLVGIATGVL 257 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~--~~~~~~~~~~ 257 (303)
||..+.... .....|..+|...+.+.+.+... .. ++++||++ +++.. .+........
T Consensus 136 ss~~~~~~~------------~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v---~~~~~~~~~~~~~~~~~ 200 (255)
T TIGR01963 136 ASAHGLVAS------------PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYV---RTPLVEKQIADQAKTRG 200 (255)
T ss_pred cchhhcCCC------------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcc---ccHHHHHHHHhhhcccC
Confidence 998543221 12234556666566666544332 22 77889865 33321 1111111000
Q ss_pred -------hhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 258 -------HTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 258 -------~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...+..+...+++++++|+|++++.++.++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~ 237 (255)
T TIGR01963 201 IPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDA 237 (255)
T ss_pred CCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCcc
Confidence 011222445568999999999999999864
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.4e-17 Score=144.24 Aligned_cols=211 Identities=13% Similarity=0.095 Sum_probs=134.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|+. |++.+|+.... .+..+++.. ...++.++.+|++
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~---Vv~~~r~~~~l--~~~~~~l~~-------------~~~~~~~~~~Dv~ 65 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGAR---VVLGDVDKPGL--RQAVNHLRA-------------EGFDVHGVMCDVR 65 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHh-------------cCCeEEEEeCCCC
Confidence 66789999999999999999999999987 88888864321 111111111 0146778999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC-CceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD-LKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~-~~r~i 183 (303)
|.+ ++..+++ .+|+||||||.... ...+...+++|+.++..+++++... ++ ..+||
T Consensus 66 d~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv 139 (275)
T PRK05876 66 HRE------EVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVV 139 (275)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 976 4555443 57999999997432 2234677899999999998887532 12 46899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHH----HHHHHHhhCcCCc--EEeecceecCccChHHH-HHHH--Hh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISET----GDEELSEMTPNRV--HISGTGWIDNVYGPIGM-LVGI--AT 254 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~----~E~~~~~~~~~~~--~ii~pg~~~~~~g~~~~-~~~~--~~ 254 (303)
++||..+.. |......|..+|.. ++.+..++..... ++++||.+.+....... .... ..
T Consensus 140 ~isS~~~~~------------~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 207 (275)
T PRK05876 140 FTASFAGLV------------PNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQ 207 (275)
T ss_pred EeCChhhcc------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccc
Confidence 999986543 22234456666664 4444444433333 78889866443321110 0000 00
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......++......++++++|+|++++.++..+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~~ 241 (275)
T PRK05876 208 SSTTGSPGPLPLQDDNLGVDDIAQLTADAILANR 241 (275)
T ss_pred cccccccccccccccCCCHHHHHHHHHHHHHcCC
Confidence 0001122333445678999999999999997653
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.5e-16 Score=136.61 Aligned_cols=205 Identities=13% Similarity=0.149 Sum_probs=141.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++++++|||||++||..++++|.++|++ |+.++|+. ++|+++...- .. ...-.+.++.+|+
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~---liLvaR~~------~kL~~la~~l-----~~---~~~v~v~vi~~DL 65 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYN---LILVARRE------DKLEALAKEL-----ED---KTGVEVEVIPADL 65 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCcH------HHHHHHHHHH-----HH---hhCceEEEEECcC
Confidence 467789999999999999999999999998 99999974 3444433321 10 1124678999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceecccc-------ccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRFD-------EHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~-------~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
++++ ++.++.. .+|++|||||...+. ......+++|+.+...|.++..+. ++..+||
T Consensus 66 s~~~------~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~Ii 139 (265)
T COG0300 66 SDPE------ALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHII 139 (265)
T ss_pred CChh------HHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Confidence 9987 5555543 599999999986542 223578889999988887777543 2567899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
+++|..+.. |.+....|..||...-.+.+.+...+ . +.+.||.+.+.+... .+..
T Consensus 140 NI~S~ag~~------------p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-------~~~~ 200 (265)
T COG0300 140 NIGSAAGLI------------PTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-------KGSD 200 (265)
T ss_pred EEechhhcC------------CCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-------cccc
Confidence 999997763 44456778888776666655544332 2 788899776555321 1110
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcccC
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
.. ......-++..+++|+..+..+.+....
T Consensus 201 --~~-~~~~~~~~~~~~~va~~~~~~l~~~k~~ 230 (265)
T COG0300 201 --VY-LLSPGELVLSPEDVAEAALKALEKGKRE 230 (265)
T ss_pred --cc-cccchhhccCHHHHHHHHHHHHhcCCce
Confidence 00 0112344688999999999988876544
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.4e-17 Score=141.81 Aligned_cols=207 Identities=10% Similarity=0.014 Sum_probs=133.5
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+++++||||+|+||+++++.|++.|+. |++++|++.. ++++.. ....++.++.+|++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~---V~~~~r~~~~------~~~l~~------------~~~~~~~~~~~D~~d 61 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHR---VVGTVRSEAA------RADFEA------------LHPDRALARLLDVTD 61 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCE---EEEEeCCHHH------HHHHHh------------hcCCCeeEEEccCCC
Confidence 4678999999999999999999999987 8899997431 222111 011467889999999
Q ss_pred CCCCCCHHHHHHHhc-------cccEEEEcceecccc-------ccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEE
Q psy17679 123 PGLGLSETDRATLVK-------QVNIVFHGAATVRFD-------EHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHV 185 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~-------~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~i 185 (303)
.+ ++..+++ .+|+|||+||..... ..+...+++|+.++.++++++.+. .+..+||++
T Consensus 62 ~~------~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~i 135 (277)
T PRK06180 62 FD------AIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNI 135 (277)
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEE
Confidence 76 4444443 589999999985421 234567899999999999886432 255799999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCcc-ChHH--------HHH
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVY-GPIG--------MLV 250 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~-g~~~--------~~~ 250 (303)
||..+... ..+...|..+|...+.+.+.+... .. ++++||++.+.+ +... ...
T Consensus 136 SS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~ 203 (277)
T PRK06180 136 TSMGGLIT------------MPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYD 203 (277)
T ss_pred ecccccCC------------CCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHH
Confidence 99855432 123445667777777777665433 22 788898774432 2110 000
Q ss_pred HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcccC
Q psy17679 251 GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
....... ... .......+..++|+|++++.++..+...
T Consensus 204 ~~~~~~~-~~~-~~~~~~~~~~~~dva~~~~~~l~~~~~~ 241 (277)
T PRK06180 204 ALFGPIR-QAR-EAKSGKQPGDPAKAAQAILAAVESDEPP 241 (277)
T ss_pred HHHHHHH-HHH-HhhccCCCCCHHHHHHHHHHHHcCCCCC
Confidence 0000000 000 0011223568999999999999876543
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-17 Score=146.59 Aligned_cols=205 Identities=12% Similarity=0.115 Sum_probs=134.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+|+|+||||+|++|+++++.|+++|+. |++++|+++. ++++... ....+.++.+|+++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~---V~~~~r~~~~------~~~~~~~------------~~~~~~~~~~D~~~ 60 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDR---VVATARDTAT------LADLAEK------------YGDRLLPLALDVTD 60 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEECCHHH------HHHHHHh------------ccCCeeEEEccCCC
Confidence 4578999999999999999999999987 8899997432 2111110 01467788999998
Q ss_pred CCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEEE
Q psy17679 123 PGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFVH 184 (303)
Q Consensus 123 ~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i~ 184 (303)
.+ .+..++ ..+|+|||+||.... ...+...+++|+.++..+++.+. +. +.+++|+
T Consensus 61 ~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~ 133 (275)
T PRK08263 61 RA------AVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-RSGHIIQ 133 (275)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEE
Confidence 76 344333 367999999997543 23456788999999888877763 33 5679999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccC-hH-------HHHH
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYG-PI-------GMLV 250 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g-~~-------~~~~ 250 (303)
+||..+.... .....|..+|...+.+.+.+... .. ++++||++.+... +. ....
T Consensus 134 vsS~~~~~~~------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~ 201 (275)
T PRK08263 134 ISSIGGISAF------------PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYD 201 (275)
T ss_pred EcChhhcCCC------------CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhh
Confidence 9998654321 12345667777777777665443 22 7888987754332 11 0011
Q ss_pred HHHhhhhhhccCCCCccccc-eehhHHHHHHHHHHhhcccCCc
Q psy17679 251 GIATGVLHTHLINLNTVTDM-VPVDLVVNSMISIAWSIGESGK 292 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~-i~v~D~a~ai~~~~~~~~~~~~ 292 (303)
.... ..... .....+ +.++|+|++++.++..+.....
T Consensus 202 ~~~~-~~~~~----~~~~~~~~~p~dva~~~~~l~~~~~~~~~ 239 (275)
T PRK08263 202 TLRE-ELAEQ----WSERSVDGDPEAAAEALLKLVDAENPPLR 239 (275)
T ss_pred hHHH-HHHHH----HHhccCCCCHHHHHHHHHHHHcCCCCCeE
Confidence 1101 11111 112234 8899999999999997755443
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.6e-17 Score=140.43 Aligned_cols=208 Identities=14% Similarity=0.082 Sum_probs=134.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++||||+|++|.++++.|++.|++ |++++|++.... .+.+.+. . ..++.++.+|+.
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~---V~~~~r~~~~~~---~~~~~~~------------~-~~~~~~~~~D~~ 63 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGAR---VVVTDRNEEAAE---RVAAEIL------------A-GGRAIAVAADVS 63 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHHHH---HHHHHHh------------c-CCeEEEEECCCC
Confidence 45689999999999999999999999987 999999853211 1111100 0 146889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+.+ ++..+++ .+|+|||++|.... ...++..+++|+.++..+++.+... .+.++||
T Consensus 64 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 137 (251)
T PRK07231 64 DEA------DVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIV 137 (251)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 977 5555543 57999999997432 1234678889999988887777642 2568999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||.++.. |......|..+|...+.+.+.+...+ . +.++||.+.+.+........ .....
T Consensus 138 ~~sS~~~~~------------~~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~-~~~~~ 204 (251)
T PRK07231 138 NVASTAGLR------------PRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEP-TPENR 204 (251)
T ss_pred EEcChhhcC------------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhccc-ChHHH
Confidence 999996543 22234456667766676666554332 2 67789877544322111100 00000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. +........+++++|+|++++.++..+.
T Consensus 205 ~~-~~~~~~~~~~~~~~dva~~~~~l~~~~~ 234 (251)
T PRK07231 205 AK-FLATIPLGRLGTPEDIANAALFLASDEA 234 (251)
T ss_pred HH-HhcCCCCCCCcCHHHHHHHHHHHhCccc
Confidence 00 1111223357899999999999997553
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=5e-17 Score=140.66 Aligned_cols=217 Identities=15% Similarity=0.166 Sum_probs=136.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++||||+|+||.++++.|++.|++ |++++|+.... .+.+.+.+.. ...++.++.+|++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~---V~~~~r~~~~~--~~~~~~~l~~------------~~~~~~~~~~D~~ 66 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAH---VVVNYRQKAPR--ANKVVAEIEA------------AGGRASAVGADLT 66 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCE---EEEEeCCchHh--HHHHHHHHHh------------cCCceEEEEcCCC
Confidence 56689999999999999999999999987 88888864311 1112111110 0146788999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeCCcccC
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVSTAFTHC 192 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS~~~~~ 192 (303)
+++ ++..+++ ++|+|||+|+.... ...+...+++|+.++.++++.+.+. ....+||++||..+..
T Consensus 67 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~ 140 (248)
T PRK07806 67 DEE------SVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHF 140 (248)
T ss_pred CHH------HHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhc
Confidence 976 4544443 68999999986432 2234567789999999999999875 1235899999964321
Q ss_pred CCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHhhhhhhccCCCCc
Q psy17679 193 PRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNT 266 (303)
Q Consensus 193 ~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 266 (303)
... . .+...+..|..+|...|.+++.+...+. +++.||.+.+.+-. .+......+..... ...
T Consensus 141 ~~~-----~--~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~-~~~~~~~~~~~~~~---~~~ 209 (248)
T PRK07806 141 IPT-----V--KTMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTA-TLLNRLNPGAIEAR---REA 209 (248)
T ss_pred Ccc-----c--cCCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhh-hhhccCCHHHHHHH---Hhh
Confidence 110 0 1112366788899999998887754322 56667654332210 01000000000000 001
Q ss_pred cccceehhHHHHHHHHHHhhcccCCc
Q psy17679 267 VTDMVPVDLVVNSMISIAWSIGESGK 292 (303)
Q Consensus 267 ~~~~i~v~D~a~ai~~~~~~~~~~~~ 292 (303)
...+++++|+|++++.++..+...+.
T Consensus 210 ~~~~~~~~dva~~~~~l~~~~~~~g~ 235 (248)
T PRK07806 210 AGKLYTVSEFAAEVARAVTAPVPSGH 235 (248)
T ss_pred hcccCCHHHHHHHHHHHhhccccCcc
Confidence 23689999999999999986544443
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1e-16 Score=138.89 Aligned_cols=211 Identities=15% Similarity=0.146 Sum_probs=134.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++||||||+|+||++++++|+++|++ |++..|.... ...+.+..+.+ ...++.++.+|++
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~---v~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~~~D~~ 66 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSL---VVVNAKKRAE-EMNETLKMVKE-------------NGGEGIGVLADVS 66 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCChH-HHHHHHHHHHH-------------cCCeeEEEEeccC
Confidence 35689999999999999999999999987 6666664321 11111111111 0135678899999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEe
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVS 186 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iS 186 (303)
+.. ++..+++ .+|+|||+||.... ...++..+++|+.+...+++++.+. ....+||++|
T Consensus 67 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~s 140 (252)
T PRK06077 67 TRE------GCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIA 140 (252)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEc
Confidence 876 4444433 68999999996332 1123567889999999999888764 2235899999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecceecCccChHHH--HHHHHhhhhhh
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGWIDNVYGPIGM--LVGIATGVLHT 259 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~~~~~~g~~~~--~~~~~~~~~~~ 259 (303)
|..+.. +..+...|..+|...+.+.+.+...+ . .++.||++.+..+.... ...........
T Consensus 141 S~~~~~------------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~ 208 (252)
T PRK06077 141 SVAGIR------------PAYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEK 208 (252)
T ss_pred chhccC------------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHh
Confidence 986542 23344567777777777777665443 2 67789876544332110 00000000001
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhcccCC
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSIGESG 291 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~ 291 (303)
......+++++|+|++++.++..+...+
T Consensus 209 ----~~~~~~~~~~~dva~~~~~~~~~~~~~g 236 (252)
T PRK06077 209 ----FTLMGKILDPEEVAEFVAAILKIESITG 236 (252)
T ss_pred ----cCcCCCCCCHHHHHHHHHHHhCccccCC
Confidence 1112368999999999999997554433
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.8e-17 Score=143.10 Aligned_cols=210 Identities=16% Similarity=0.103 Sum_probs=136.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|++ |++++|+.... ....+++.. . ....++.++.+|++
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~~---V~~~~r~~~~~--~~~~~~l~~---------~--~~~~~~~~~~~Dl~ 68 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAA---VMIVGRNPDKL--AAAAEEIEA---------L--KGAGAVRYEPADVT 68 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCe---EEEEeCCHHHH--HHHHHHHHh---------c--cCCCceEEEEcCCC
Confidence 66799999999999999999999999987 88888874321 111111110 0 00146788999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+.+ ++..+++ ++|++||+||.... ...+...+++|+.++..+++.+.+. .+..+|+
T Consensus 69 ~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv 142 (276)
T PRK05875 69 DED------QVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFV 142 (276)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 876 4554444 68999999995421 1234567888999999998877553 1346899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+... ....+.|..+|...|.+++.+...+. ++++||++.+...............
T Consensus 143 ~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~- 209 (276)
T PRK05875 143 GISSIAASNT------------HRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSAD- 209 (276)
T ss_pred EEechhhcCC------------CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHH-
Confidence 9999865321 22345677888888888887654432 7888987654432110000000000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
+........+++++|+|+++++++..+..
T Consensus 210 ---~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 238 (276)
T PRK05875 210 ---YRACTPLPRVGEVEDVANLAMFLLSDAAS 238 (276)
T ss_pred ---HHcCCCCCCCcCHHHHHHHHHHHcCchhc
Confidence 00111123467899999999999987643
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.1e-17 Score=144.35 Aligned_cols=184 Identities=14% Similarity=0.100 Sum_probs=122.9
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGL 125 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~ 125 (303)
+|+||||||++|++++++|++.|++ |++++|+++... ..++..+.+|+.|++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~---V~~~~R~~~~~~------------------------~~~~~~~~~d~~d~~- 52 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVP---FLVASRSSSSSA------------------------GPNEKHVKFDWLDED- 52 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCc---EEEEeCCCcccc------------------------CCCCccccccCCCHH-
Confidence 4899999999999999999999988 999999865321 146667889999987
Q ss_pred CCCHHHHHHHh------cc-ccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccc
Q psy17679 126 GLSETDRATLV------KQ-VNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERID 198 (303)
Q Consensus 126 ~~~~~~~~~~~------~~-~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~ 198 (303)
.+..++ ++ +|.|+|+++.... . .....+++++|++. +++|||++||.+.....
T Consensus 53 -----~l~~a~~~~~~~~g~~d~v~~~~~~~~~---~-------~~~~~~~i~aa~~~-gv~~~V~~Ss~~~~~~~---- 112 (285)
T TIGR03649 53 -----TWDNPFSSDDGMEPEISAVYLVAPPIPD---L-------APPMIKFIDFARSK-GVRRFVLLSASIIEKGG---- 112 (285)
T ss_pred -----HHHHHHhcccCcCCceeEEEEeCCCCCC---h-------hHHHHHHHHHHHHc-CCCEEEEeeccccCCCC----
Confidence 677877 56 9999999874321 1 12335789999998 99999999997542210
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHH
Q psy17679 199 EEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVN 278 (303)
Q Consensus 199 E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ 278 (303)
+ .+...+++++....-..+++||++++..+........+..... ...+.++..++||+++|+|+
T Consensus 113 ------~---------~~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~v~~~Dva~ 176 (285)
T TIGR03649 113 ------P---------AMGQVHAHLDSLGGVEYTVLRPTWFMENFSEEFHVEAIRKENK-IYSATGDGKIPFVSADDIAR 176 (285)
T ss_pred ------c---------hHHHHHHHHHhccCCCEEEEeccHHhhhhcccccccccccCCe-EEecCCCCccCcccHHHHHH
Confidence 0 0111344554431222289999876432211101111111111 22345678899999999999
Q ss_pred HHHHHHhhcccCCcc
Q psy17679 279 SMISIAWSIGESGKV 293 (303)
Q Consensus 279 ai~~~~~~~~~~~~~ 293 (303)
+++.++.++...+..
T Consensus 177 ~~~~~l~~~~~~~~~ 191 (285)
T TIGR03649 177 VAYRALTDKVAPNTD 191 (285)
T ss_pred HHHHHhcCCCcCCCe
Confidence 999999876544443
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.9e-17 Score=139.63 Aligned_cols=208 Identities=14% Similarity=0.122 Sum_probs=132.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|++|+++++.|++.|++ |+++.|+.... .+..+.+. ...++.++++|++
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~---v~~~~r~~~~~--~~~~~~~~--------------~~~~~~~~~~D~~ 63 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGAR---VVVADRDAEAA--ERVAAAIA--------------AGGRAFARQGDVG 63 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCe---EEEecCCHHHH--HHHHHHHh--------------cCCeEEEEEcCCC
Confidence 45789999999999999999999999987 88888874321 11111110 0246889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i 183 (303)
+.. ++.++++ ++|+|||++|.... ...+...+.+|+.++..+.+.+. +. +.++||
T Consensus 64 ~~~------~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii 136 (252)
T PRK06138 64 SAE------AVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIV 136 (252)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEEE
Confidence 976 4554443 68999999997532 12345678899999877766654 34 667999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhh-
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGV- 256 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~- 256 (303)
++||..+... ......|..+|...+.+.+.+...+ . ++++||++.+..... .........
T Consensus 137 ~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~-~~~~~~~~~~ 203 (252)
T PRK06138 137 NTASQLALAG------------GRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRR-IFARHADPEA 203 (252)
T ss_pred EECChhhccC------------CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhh-hhccccChHH
Confidence 9999855421 1123457777777778777665433 2 677788653332111 100000000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.............|++++|+|++++.++.++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~ 235 (252)
T PRK06138 204 LREALRARHPMNRFGTAEEVAQAALFLASDES 235 (252)
T ss_pred HHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence 00011111112237899999999999988765
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.8e-17 Score=141.45 Aligned_cols=211 Identities=11% Similarity=0.039 Sum_probs=133.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|++++++||||+|++|+++++.|+++|+. |++++|+++... .+.+.... . ....++.++.+|++
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~~---V~~~~r~~~~~~---~~~~~~~~--------~--~~~~~~~~~~~D~~ 64 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGYL---VIATMRNPEKQE---NLLSQATQ--------L--NLQQNIKVQQLDVT 64 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCE---EEEEeCCHHHHH---HHHHHHHh--------c--CCCCceeEEecCCC
Confidence 35678999999999999999999999987 888888753221 11111100 0 01147889999999
Q ss_pred CCCCCCCHHHHHH------HhccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHH----HhcCCCceEEE
Q psy17679 122 LPGLGLSETDRAT------LVKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLA----REMKDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~------~~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a----~~~~~~~r~i~ 184 (303)
|++ ++.. .+..+|+|||+||.... ...+...+++|+.++..+++.+ ++. +..+||+
T Consensus 65 d~~------~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~ 137 (280)
T PRK06914 65 DQN------SIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-KSGKIIN 137 (280)
T ss_pred CHH------HHHHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEE
Confidence 976 3332 22368999999997542 1234567789999988888876 334 5679999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCc----CCc--EEeecceecCcc-ChHH----------
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTP----NRV--HISGTGWIDNVY-GPIG---------- 247 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~----~~~--~ii~pg~~~~~~-g~~~---------- 247 (303)
+||..+... ......|..+|...+.+.+.++. ... ++++||.+.+.. ....
T Consensus 138 vsS~~~~~~------------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~ 205 (280)
T PRK06914 138 ISSISGRVG------------FPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETT 205 (280)
T ss_pred ECcccccCC------------CCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccc
Confidence 999854321 12334566777777777776642 222 788898664332 1100
Q ss_pred -HHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcccC
Q psy17679 248 -MLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 248 -~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
.......... ... ......+++++|+|++++.++.++...
T Consensus 206 ~~~~~~~~~~~-~~~--~~~~~~~~~~~dva~~~~~~~~~~~~~ 246 (280)
T PRK06914 206 SPYKEYMKKIQ-KHI--NSGSDTFGNPIDVANLIVEIAESKRPK 246 (280)
T ss_pred cchHHHHHHHH-HHH--hhhhhccCCHHHHHHHHHHHHcCCCCC
Confidence 0000001000 000 012245789999999999999987654
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-16 Score=142.27 Aligned_cols=209 Identities=12% Similarity=0.046 Sum_probs=136.0
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|++.|++ |++..|+...... +.+.+.... ...++.++.+|+
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~---V~i~~~~~~~~~~-~~~~~~~~~------------~~~~~~~~~~Dl 115 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGAD---IALNYLPEEEQDA-AEVVQLIQA------------EGRKAVALPGDL 115 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCE---EEEEeCCcchHHH-HHHHHHHHH------------cCCeEEEEecCC
Confidence 366799999999999999999999999987 6666665432211 122111111 124677899999
Q ss_pred CCCCCCCCHHHHHHHh-------ccccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEE
Q psy17679 121 SLPGLGLSETDRATLV-------KQVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVH 184 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~ 184 (303)
++.+ ++..++ .++|++|||||.... ...+...+++|+.++..+++++.+. ....+||+
T Consensus 116 ~~~~------~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~ 189 (300)
T PRK06128 116 KDEA------FCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIIN 189 (300)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEE
Confidence 9876 444443 368999999996421 2346778999999999999999764 12358999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH-HHHHHHhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG-MLVGIATGVL 257 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~-~~~~~~~~~~ 257 (303)
+||..+... ......|..+|...+.+.+.+...+ . +++.||++.+...+.. .......
T Consensus 190 ~sS~~~~~~------------~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~--- 254 (300)
T PRK06128 190 TGSIQSYQP------------SPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIP--- 254 (300)
T ss_pred ECCccccCC------------CCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHH---
Confidence 999865432 1233457788888888887765443 2 7788987754432110 0000010
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.++.......+...+|+|.+++.++....
T Consensus 255 --~~~~~~p~~r~~~p~dva~~~~~l~s~~~ 283 (300)
T PRK06128 255 --DFGSETPMKRPGQPVEMAPLYVLLASQES 283 (300)
T ss_pred --HHhcCCCCCCCcCHHHHHHHHHHHhCccc
Confidence 11111122346789999999999887543
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.7e-17 Score=141.42 Aligned_cols=204 Identities=13% Similarity=0.131 Sum_probs=130.3
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+|+|+||||+|+||.++++.|.+.|++ |++++|++.. ++++.. .++.++.+|++|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~---Vi~~~r~~~~------~~~l~~---------------~~~~~~~~Dl~d 58 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWR---VFATCRKEED------VAALEA---------------EGLEAFQLDYAE 58 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHHH------HHHHHH---------------CCceEEEccCCC
Confidence 3578999999999999999999999987 8899997432 222211 357789999998
Q ss_pred CCCCCCHHHHHHHhc--------cccEEEEcceecccc-------ccHHHHHhhhHHHHH----HHHHHHHhcCCCceEE
Q psy17679 123 PGLGLSETDRATLVK--------QVNIVFHGAATVRFD-------EHIKMAVKINVCGVQ----AMLQLAREMKDLKAFV 183 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~--------~~dvVi~~a~~~~~~-------~~~~~~~~~N~~~~~----~ll~~a~~~~~~~r~i 183 (303)
.+ ++..+++ .+|+||||||..... ..+...+++|+.++. .++..+.+. +..+||
T Consensus 59 ~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~iv 131 (277)
T PRK05993 59 PE------SIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGRIV 131 (277)
T ss_pred HH------HHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCEEE
Confidence 76 3433332 579999999875321 234568889999954 455555555 678999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHH--HHHHhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGML--VGIATG 255 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~--~~~~~~ 255 (303)
++||.++.. |......|..+|...+.+.+.+... .. ++++||.+.+.+...... ......
T Consensus 132 ~isS~~~~~------------~~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~ 199 (277)
T PRK05993 132 QCSSILGLV------------PMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDI 199 (277)
T ss_pred EECChhhcC------------CCCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhcc
Confidence 999986643 2223456778888888887765422 22 788899776544322110 000000
Q ss_pred -----------hhhhccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 256 -----------VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 256 -----------~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
...............+..+++|+.++.++.++..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a~~~~~~ 244 (277)
T PRK05993 200 ENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHALTAPRP 244 (277)
T ss_pred ccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHcCCCC
Confidence 0000000000111136789999999999986653
|
|
| >KOG1372|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.6e-17 Score=136.46 Aligned_cols=229 Identities=17% Similarity=0.143 Sum_probs=169.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+...|..||||-||.-|++|++-|+.+|++ |+++.|.++..+ ..+++.+..+...+ .......+.+|+
T Consensus 25 ~r~rkvALITGItGQDGSYLaEfLL~KgYe---VHGiiRRsSsFN-T~RIeHlY~nP~~h--------~~~~mkLHYgDm 92 (376)
T KOG1372|consen 25 FRPRKVALITGITGQDGSYLAEFLLSKGYE---VHGIIRRSSSFN-TARIEHLYSNPHTH--------NGASMKLHYGDM 92 (376)
T ss_pred cccceEEEEecccCCCchHHHHHHHhCCce---eeEEEeeccccc-hhhhhhhhcCchhc--------ccceeEEeeccc
Confidence 445578999999999999999999999999 888888876654 56777776653221 225777899999
Q ss_pred CCCCCCCCHHHHHHHhc--cccEEEEcceecccccc---HHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEeCC--ccc
Q psy17679 121 SLPGLGLSETDRATLVK--QVNIVFHGAATVRFDEH---IKMAVKINVCGVQAMLQLAREMK--DLKAFVHVSTA--FTH 191 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~~~~---~~~~~~~N~~~~~~ll~~a~~~~--~~~r~i~iSS~--~~~ 191 (303)
+|.. .+.+++. +++-|+|.|+.....-+ .+...++...|+++|+++.+.++ ..-||...||+ |+.
T Consensus 93 TDss------~L~k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGk 166 (376)
T KOG1372|consen 93 TDSS------CLIKLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGK 166 (376)
T ss_pred cchH------HHHHHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhccc
Confidence 9987 5888887 88999999998764222 24556778899999999998872 23478888888 888
Q ss_pred CCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHH-----------HHHHHHhhhhh-h
Q psy17679 192 CPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIG-----------MLVGIATGVLH-T 259 (303)
Q Consensus 192 ~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~-----------~~~~~~~~~~~-~ 259 (303)
..+.|..|.++..|.+||...++ .+-.++..+.+.+.+..+-|.++|.-.|++ .+..+..|... .
T Consensus 167 v~e~PQsE~TPFyPRSPYa~aKm---y~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~ 243 (376)
T KOG1372|consen 167 VQEIPQSETTPFYPRSPYAAAKM---YGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKI 243 (376)
T ss_pred ccCCCcccCCCCCCCChhHHhhh---hheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeE
Confidence 88888999888888887765554 345666666777765666666666665542 22222233322 2
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhcccC
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
-+|.-+..+||-|..|.+++++.++++..+.
T Consensus 244 ~LGNL~a~RDWGhA~dYVEAMW~mLQ~d~Pd 274 (376)
T KOG1372|consen 244 ELGNLSALRDWGHAGDYVEAMWLMLQQDSPD 274 (376)
T ss_pred EecchhhhcccchhHHHHHHHHHHHhcCCCC
Confidence 3566788999999999999999999977654
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-16 Score=137.78 Aligned_cols=204 Identities=11% Similarity=0.048 Sum_probs=132.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+||||+|++|.++++.|+++|+. |++++|+.... ....+.+.. ...++.++.+|+.
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~---V~~~~r~~~~~--~~~~~~l~~-------------~~~~~~~~~~Dl~ 65 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAE---VIVVDICGDDA--AATAELVEA-------------AGGKARARQVDVR 65 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHh-------------cCCeEEEEECCCC
Confidence 45689999999999999999999999987 99999975321 111111111 1145889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ .+.++++ .+|+|||+++.... ...+...+++|+.++..+++.+.+. .+.++||+
T Consensus 66 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~ 139 (251)
T PRK12826 66 DRA------ALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVL 139 (251)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 876 4555553 68999999987543 1234567889999999998887532 25678999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH--HHHHHHhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG--MLVGIATGV 256 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~--~~~~~~~~~ 256 (303)
+||..+.. .+...+..|..+|...+.+++.+.... . .+++||.+ +++.. .........
T Consensus 140 ~ss~~~~~-----------~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~---~~~~~~~~~~~~~~~~ 205 (251)
T PRK12826 140 TSSVAGPR-----------VGYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGV---DTPMAGNLGDAQWAEA 205 (251)
T ss_pred EechHhhc-----------cCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCC---CcchhhhcCchHHHHH
Confidence 99996541 122234457777777777777654332 2 67788755 33321 000000011
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+........+++++|+|++++.++..+
T Consensus 206 ----~~~~~~~~~~~~~~dva~~~~~l~~~~ 232 (251)
T PRK12826 206 ----IAAAIPLGRLGEPEDIAAAVLFLASDE 232 (251)
T ss_pred ----HHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 100111125789999999999988654
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-16 Score=137.96 Aligned_cols=198 Identities=17% Similarity=0.177 Sum_probs=131.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|++|.++++.|++.|++ |++++|+.... +.+.+...+ ...++.++.+|++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~---vi~~~r~~~~~---~~~~~~~~~------------~~~~~~~~~~Dl~ 65 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGAS---VVVADINAEGA---ERVAKQIVA------------DGGTAIAVQVDVS 65 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHHHHHHh------------cCCcEEEEEcCCC
Confidence 45689999999999999999999999987 88999874321 122111110 0136778899999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc----------cccHHHHHhhhHHHHHHHHHHHHhc---CCCce
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF----------DEHIKMAVKINVCGVQAMLQLAREM---KDLKA 181 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~----------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r 181 (303)
+.. ++..+++ .+|+|||+||.... ...+...+++|+.++.++++++.+. .+.++
T Consensus 66 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 139 (250)
T PRK07774 66 DPD------SAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGA 139 (250)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcE
Confidence 876 4444333 68999999997421 1234567889999999999888764 13569
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH----HHHHH
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI----GMLVG 251 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~----~~~~~ 251 (303)
||++||..+.. +...|..+|...+.+.+.+...+ . ++++||.+.+..... .+...
T Consensus 140 iv~~sS~~~~~---------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~ 204 (250)
T PRK07774 140 IVNQSSTAAWL---------------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVAD 204 (250)
T ss_pred EEEEecccccC---------------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHH
Confidence 99999986532 12346677777888877765443 2 788898765443221 11111
Q ss_pred HHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 252 IATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...+.+ ..-+.+++|+|++++.++..+
T Consensus 205 ~~~~~~---------~~~~~~~~d~a~~~~~~~~~~ 231 (250)
T PRK07774 205 MVKGIP---------LSRMGTPEDLVGMCLFLLSDE 231 (250)
T ss_pred HHhcCC---------CCCCcCHHHHHHHHHHHhChh
Confidence 111111 112467899999999988764
|
|
| >KOG1431|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.6e-17 Score=133.96 Aligned_cols=205 Identities=18% Similarity=0.128 Sum_probs=143.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|||||||++|.+|++|.+.+.+.|.+-+....... -.+|+++.
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s------------------------------------kd~DLt~~ 44 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS------------------------------------KDADLTNL 44 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc------------------------------------ccccccch
Confidence 478999999999999999999998763222222111 25677776
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcceeccc----cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCC
Q psy17679 124 GLGLSETDRATLVK--QVNIVFHGAATVRF----DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRE 195 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--~~dvVi~~a~~~~~----~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~ 195 (303)
+ +...+++ ++..|||.|+...- .....+++..|+.-.-++++.|.+. ++++++++.|+.-++ ...
T Consensus 45 a------~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclStCIfPdkt~y 117 (315)
T KOG1431|consen 45 A------DTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLSTCIFPDKTSY 117 (315)
T ss_pred H------HHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcceeecCCCCCC
Confidence 5 6777776 89999999998652 3334678888988889999999999 999999999985444 456
Q ss_pred ccccCCCC--CCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH------------HHHHHHh----
Q psy17679 196 RIDEEFYP--VPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG------------MLVGIAT---- 254 (303)
Q Consensus 196 ~~~E~~~~--~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~------------~~~~~~~---- 254 (303)
|++|.-.. .|.+....|..+|.+..-.-+.+..+++ +.+.| .|+|||+. ++.++..
T Consensus 118 PIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviP---tNvfGphDNfnpe~sHVlPali~r~h~ak~~ 194 (315)
T KOG1431|consen 118 PIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIP---TNVFGPHDNFNPENSHVLPALIHRFHEAKRN 194 (315)
T ss_pred CCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeecc---ccccCCCCCCCcccccchHHHHHHHHHHHhc
Confidence 88887432 3333334466667655555566665555 23334 57777652 2222222
Q ss_pred hh-hhhccCCCCccccceehhHHHHHHHHHHhhcccCCcch
Q psy17679 255 GV-LHTHLINLNTVTDMVPVDLVVNSMISIAWSIGESGKVE 294 (303)
Q Consensus 255 ~~-~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~~ 294 (303)
|. ...+||.|...+.|+|++|+|++++++++.=....++.
T Consensus 195 gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~vEpii 235 (315)
T KOG1431|consen 195 GTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYEGVEPII 235 (315)
T ss_pred CCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhcCccceE
Confidence 22 34689999999999999999999999998655544443
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-16 Score=137.72 Aligned_cols=205 Identities=14% Similarity=0.123 Sum_probs=131.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++||||+|+||.++++.|+++|+. |+++.+... ....+..+.+.. ...++.++.+|++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~---v~~~~~~~~-~~~~~~~~~l~~-------------~~~~~~~~~~D~~ 66 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAK---VVINYNSSK-EAAENLVNELGK-------------EGHDVYAVQADVS 66 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCE---EEEEcCCcH-HHHHHHHHHHHh-------------cCCeEEEEECCCC
Confidence 45789999999999999999999999987 665544321 111111111111 1146889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceecccc-------ccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRFD-------EHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~-------~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++.++++ .+|+|||+||..... ..+...+++|+.++..+++++... .+..+||+
T Consensus 67 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 140 (247)
T PRK12935 67 KVE------DANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIIS 140 (247)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 976 4555554 479999999985421 345678899999999999888753 14569999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||.++.... .....|..+|...+.+.+.+...+ . ++++||++.+..... .......
T Consensus 141 ~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~---- 203 (247)
T PRK12935 141 ISSIIGQAGG------------FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE-VPEEVRQ---- 203 (247)
T ss_pred EcchhhcCCC------------CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh-ccHHHHH----
Confidence 9998654321 123346666776666665554332 2 678898764332111 1011111
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
... .......+++++|++++++.++...
T Consensus 204 ~~~-~~~~~~~~~~~edva~~~~~~~~~~ 231 (247)
T PRK12935 204 KIV-AKIPKKRFGQADEIAKGVVYLCRDG 231 (247)
T ss_pred HHH-HhCCCCCCcCHHHHHHHHHHHcCcc
Confidence 111 1122356899999999999988653
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.2e-16 Score=139.93 Aligned_cols=216 Identities=14% Similarity=0.032 Sum_probs=134.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+||||+|+||.++++.|++.|+. |++++|+... +++.... ..++.++.+|++
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~---Vv~~~R~~~~------~~~~~~~-------------l~~v~~~~~Dl~ 81 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAH---VIVPARRPDV------AREALAG-------------IDGVEVVMLDLA 81 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHH------HHHHHHH-------------hhhCeEEEccCC
Confidence 56789999999999999999999999987 8888997431 1111111 024778999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc-----cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEEEE
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF-----DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFVHV 185 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-----~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i~i 185 (303)
|.+ ++..++ .++|+||||||.... ...++..+++|+.++..+++.+. +. +..|||++
T Consensus 82 d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~v 154 (315)
T PRK06196 82 DLE------SVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVAL 154 (315)
T ss_pred CHH------HHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEE
Confidence 976 444444 368999999997432 23457788999999766666554 33 45799999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHH-HHHHhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGML-VGIATGVLH 258 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~-~~~~~~~~~ 258 (303)
||...........+.....+..++..|..+|...+.+.+.+... .. ++++||++.+.+...... .....+...
T Consensus 155 SS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~ 234 (315)
T PRK06196 155 SSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVD 234 (315)
T ss_pred CCHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhh
Confidence 99854322111221111234455677888888888877665432 22 788899775443211000 000000000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. .+. .....+...++.|..++.++..+.
T Consensus 235 ~-~~~-~~~~~~~~~~~~a~~~~~l~~~~~ 262 (315)
T PRK06196 235 E-HGN-PIDPGFKTPAQGAATQVWAATSPQ 262 (315)
T ss_pred h-hhh-hhhhhcCCHhHHHHHHHHHhcCCc
Confidence 0 000 000024578999999999987654
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-16 Score=138.51 Aligned_cols=207 Identities=11% Similarity=0.065 Sum_probs=134.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+||||||+|+||++++++|++.|++ |++++|++... +.+.+... ....++.++.+|++
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~---V~~~~r~~~~~---~~~~~~i~------------~~~~~~~~~~~D~~ 69 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAE---VILNGRDPAKL---AAAAESLK------------GQGLSAHALAFDVT 69 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCE---EEEEeCCHHHH---HHHHHHHH------------hcCceEEEEEccCC
Confidence 56799999999999999999999999987 88888874311 11111111 01145788999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++..+++ .+|+|||++|.... ...++..+.+|+.++..+++++.+. ++.++||+
T Consensus 70 ~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 143 (255)
T PRK07523 70 DHD------AVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIIN 143 (255)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEE
Confidence 976 4555544 58999999997532 2234567889999999999888653 24679999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+.. +...+..|..+|...+.+.+.+...+ . ++++||++.+..............
T Consensus 144 iss~~~~~------------~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~--- 208 (255)
T PRK07523 144 IASVQSAL------------ARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSA--- 208 (255)
T ss_pred Eccchhcc------------CCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHH---
Confidence 99985432 12234556777777777777665432 2 678898665443211000000000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..........+..++|+|++++.++....
T Consensus 209 -~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 237 (255)
T PRK07523 209 -WLEKRTPAGRWGKVEELVGACVFLASDAS 237 (255)
T ss_pred -HHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence 00111112347789999999999987543
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2e-16 Score=136.55 Aligned_cols=202 Identities=11% Similarity=0.077 Sum_probs=133.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++||||+|++|.++++.|++.|++ |++++|+... ++++... .+..++.+|++
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~---V~~~~r~~~~------~~~~~~~--------------~~~~~~~~D~~ 63 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGAR---VVAAARNAAA------LDRLAGE--------------TGCEPLRLDVG 63 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCCE---EEEEeCCHHH------HHHHHHH--------------hCCeEEEecCC
Confidence 56789999999999999999999999987 8899987431 2111110 24567889999
Q ss_pred CCCCCCCHHHHHHHhc---cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceEEEEeC
Q psy17679 122 LPGLGLSETDRATLVK---QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAFVHVST 187 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~---~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~i~iSS 187 (303)
+.. .+..+++ ++|+|||+||.... ...+...+.+|+.++..+++++.+. +...+||++||
T Consensus 64 ~~~------~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS 137 (245)
T PRK07060 64 DDA------AIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSS 137 (245)
T ss_pred CHH------HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEcc
Confidence 865 4555554 58999999997532 1235567789999999998888653 11368999999
Q ss_pred CcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhhhcc
Q psy17679 188 AFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLHTHL 261 (303)
Q Consensus 188 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~ 261 (303)
..+... ......|..+|...+.+.+.+...+ . ..++||.+.+......+....... ...
T Consensus 138 ~~~~~~------------~~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~---~~~ 202 (245)
T PRK07060 138 QAALVG------------LPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSG---PML 202 (245)
T ss_pred HHHcCC------------CCCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHH---HHH
Confidence 854321 2234457788888888887665432 2 677788664433211100000000 000
Q ss_pred CCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 262 INLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 262 ~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.......|++++|+|++++.++..+.
T Consensus 203 -~~~~~~~~~~~~d~a~~~~~l~~~~~ 228 (245)
T PRK07060 203 -AAIPLGRFAEVDDVAAPILFLLSDAA 228 (245)
T ss_pred -hcCCCCCCCCHHHHHHHHHHHcCccc
Confidence 01112458999999999999998654
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.6e-17 Score=141.24 Aligned_cols=208 Identities=13% Similarity=0.088 Sum_probs=135.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++||||+|+||.++++.|+++|++ |++++|+... ++++... ....+.++.+|++
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~---v~~~~r~~~~------~~~~~~~------------~~~~~~~~~~D~~ 62 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGAR---VVIADIKPAR------ARLAALE------------IGPAAIAVSLDVT 62 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCE---EEEEcCCHHH------HHHHHHH------------hCCceEEEEccCC
Confidence 45689999999999999999999999987 8888886431 2111110 0135788999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---C-CCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---K-DLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~-~~~r~i 183 (303)
+.+ ++..+++ .+|++||+||.... ...+...+++|+.++..+++++... + ...+||
T Consensus 63 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv 136 (257)
T PRK07067 63 RQD------SIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKII 136 (257)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEE
Confidence 876 4444443 68999999997532 2345678899999999999988653 1 125899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChH--HHHHHHH--
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPI--GMLVGIA-- 253 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~--~~~~~~~-- 253 (303)
++||..+... ..+...|..+|...+.+.+.++.. .. ++++||++.+..... ..+....
T Consensus 137 ~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~ 204 (257)
T PRK07067 137 NMASQAGRRG------------EALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENR 204 (257)
T ss_pred EeCCHHhCCC------------CCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCC
Confidence 9999744321 123445667777777777655432 22 778898664432111 0011000
Q ss_pred -hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 -TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 -~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+.....++.+.....+++++|+|++++.++..+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~ 240 (257)
T PRK07067 205 PPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADA 240 (257)
T ss_pred CHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCccc
Confidence 01111122333345678999999999999998653
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.1e-16 Score=154.73 Aligned_cols=175 Identities=14% Similarity=0.118 Sum_probs=119.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
||||||||+||||+++++.|++.|++ |++++|.+... ...+++++.+|+.+..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~---Vi~ldr~~~~~------------------------~~~~ve~v~~Dl~d~~ 53 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHT---VSGIAQHPHDA------------------------LDPRVDYVCASLRNPV 53 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCE---EEEEeCChhhc------------------------ccCCceEEEccCCCHH
Confidence 57999999999999999999999987 89999864310 0146889999998863
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCCCCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPV 204 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~~~ 204 (303)
+..++.++|+|||+|+..... ...+|+.++.+++++|++. ++ ++||+||.++...
T Consensus 54 -------l~~al~~~D~VIHLAa~~~~~-----~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~~G~~~----------- 108 (699)
T PRK12320 54 -------LQELAGEADAVIHLAPVDTSA-----PGGVGITGLAHVANAAARA-GA-RLLFVSQAAGRPE----------- 108 (699)
T ss_pred -------HHHHhcCCCEEEEcCccCccc-----hhhHHHHHHHHHHHHHHHc-CC-eEEEEECCCCCCc-----------
Confidence 567778999999999864211 1247999999999999998 66 7999999864211
Q ss_pred CCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHH--HHHHHhhhhhhccCCCCccccceehhHHHHHHHH
Q psy17679 205 PLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGM--LVGIATGVLHTHLINLNTVTDMVPVDLVVNSMIS 282 (303)
Q Consensus 205 ~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~ 282 (303)
.|. .+|.++....- ..+++|+ +++|||... ....+........ ....+.+||++|++++++.
T Consensus 109 ---~~~-------~aE~ll~~~~~-p~~ILR~---~nVYGp~~~~~~~r~I~~~l~~~~--~~~pI~vIyVdDvv~alv~ 172 (699)
T PRK12320 109 ---LYR-------QAETLVSTGWA-PSLVIRI---APPVGRQLDWMVCRTVATLLRSKV--SARPIRVLHLDDLVRFLVL 172 (699)
T ss_pred ---ccc-------HHHHHHHhcCC-CEEEEeC---ceecCCCCcccHhHHHHHHHHHHH--cCCceEEEEHHHHHHHHHH
Confidence 010 24665554321 1267765 577876421 1111111111111 1344557999999999999
Q ss_pred HHhhc
Q psy17679 283 IAWSI 287 (303)
Q Consensus 283 ~~~~~ 287 (303)
++..+
T Consensus 173 al~~~ 177 (699)
T PRK12320 173 ALNTD 177 (699)
T ss_pred HHhCC
Confidence 98753
|
|
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.5e-17 Score=138.82 Aligned_cols=172 Identities=16% Similarity=0.203 Sum_probs=119.6
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHH-HHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
..+++|+|+||||+.+||.+++..|.+.|.. ++.++|.... .+++ +++.+. -+ ..++.++++
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~---l~lvar~~rr---l~~v~~~l~~~---------~~--~~~v~~~~~ 70 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGAK---LVLVARRARR---LERVAEELRKL---------GS--LEKVLVLQL 70 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCc---eEEeehhhhh---HHHHHHHHHHh---------CC--cCccEEEeC
Confidence 3478899999999999999999999999987 6666665432 3333 222221 11 126999999
Q ss_pred cCCCCCCCCCHHHHHH-------HhccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCce
Q psy17679 119 DCSLPGLGLSETDRAT-------LVKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKA 181 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~-------~~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r 181 (303)
|++|.+ +..+ .+.++|++|||||.... .......+++|+.|+..+.+++.+. .+..|
T Consensus 71 Dvs~~~------~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~Gh 144 (282)
T KOG1205|consen 71 DVSDEE------SVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGH 144 (282)
T ss_pred ccCCHH------HHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCe
Confidence 999987 3443 34489999999998652 2234568999999998888888655 24579
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc-----EE--eecceecCccChH
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV-----HI--SGTGWIDNVYGPI 246 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~-----~i--i~pg~~~~~~g~~ 246 (303)
||.+||..|.... |. ...|..+|.+.+.+.+.+..... ++ +.||++.+.+.+.
T Consensus 145 IVvisSiaG~~~~----------P~--~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~ 204 (282)
T KOG1205|consen 145 IVVISSIAGKMPL----------PF--RSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTGK 204 (282)
T ss_pred EEEEeccccccCC----------Cc--ccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccch
Confidence 9999999776432 22 22566677666676665544332 32 7799887765433
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.2e-16 Score=137.69 Aligned_cols=209 Identities=12% Similarity=0.068 Sum_probs=134.1
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|++.|+. |++++|+.... .+..+++.. . ....++.++.+|+
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~---vv~~~r~~~~~--~~~~~~~~~---------~--~~~~~~~~~~~Dl 67 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAA---VALADLDAALA--ERAAAAIAR---------D--VAGARVLAVPADV 67 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHh---------c--cCCceEEEEEccC
Confidence 367799999999999999999999999987 88888864321 111111111 0 0124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
++.+ ++..+++ .+|++|||||.... ...+...+++|+.++..+++++.+. ++..+||
T Consensus 68 ~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 141 (260)
T PRK07063 68 TDAA------SVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIV 141 (260)
T ss_pred CCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEE
Confidence 9976 4444443 68999999997432 2345678899999998888877542 2456899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH-----HHH
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML-----VGI 252 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~-----~~~ 252 (303)
++||..+... ......|..+|...+.+.+.+...+ . +.+.||++.+......+. ...
T Consensus 142 ~isS~~~~~~------------~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~ 209 (260)
T PRK07063 142 NIASTHAFKI------------IPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAA 209 (260)
T ss_pred EECChhhccC------------CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHH
Confidence 9999865432 2233457777777777777664433 2 677898775443211000 000
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........+ ...+...+|+|.++++++...+
T Consensus 210 ~~~~~~~~~-----~~r~~~~~~va~~~~fl~s~~~ 240 (260)
T PRK07063 210 RAETLALQP-----MKRIGRPEEVAMTAVFLASDEA 240 (260)
T ss_pred HHHHHhcCC-----CCCCCCHHHHHHHHHHHcCccc
Confidence 000000001 1125678999999999887543
|
|
| >KOG2865|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.2e-17 Score=136.20 Aligned_cols=214 Identities=17% Similarity=0.172 Sum_probs=160.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+..+-.+-|+|||||+|++++.+|.+.|.+ |++--|........ .+. .....++-++..|+
T Consensus 58 S~sGiVaTVFGAtGFlGryvvnklak~GSQ---viiPyR~d~~~~r~---lkv-------------mGdLGQvl~~~fd~ 118 (391)
T KOG2865|consen 58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQ---VIIPYRGDEYDPRH---LKV-------------MGDLGQVLFMKFDL 118 (391)
T ss_pred cccceEEEEecccccccHHHHHHHhhcCCe---EEEeccCCccchhh---eee-------------cccccceeeeccCC
Confidence 344567889999999999999999999987 88888864322100 000 01235788999999
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccC
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEE 200 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~ 200 (303)
.|++ .++++.+...+|||..|.--...++ .+.++|+.+..++...|++. ++.||||+|+....
T Consensus 119 ~Ded------SIr~vvk~sNVVINLIGrd~eTknf-~f~Dvn~~~aerlAricke~-GVerfIhvS~Lgan--------- 181 (391)
T KOG2865|consen 119 RDED------SIRAVVKHSNVVINLIGRDYETKNF-SFEDVNVHIAERLARICKEA-GVERFIHVSCLGAN--------- 181 (391)
T ss_pred CCHH------HHHHHHHhCcEEEEeeccccccCCc-ccccccchHHHHHHHHHHhh-Chhheeehhhcccc---------
Confidence 9988 7999999999999999975555554 46688999999999999999 99999999998632
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhh-----hhhhccCCC-Cccccceehh
Q psy17679 201 FYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATG-----VLHTHLINL-NTVTDMVPVD 274 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~-----~~~~~~~~~-~~~~~~i~v~ 274 (303)
....+.+-.+|...|..++...+.. +|++| ..+||..+-+.+...- ....+++.| .+.-..+||.
T Consensus 182 -----v~s~Sr~LrsK~~gE~aVrdafPeA-tIirP---a~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~ 252 (391)
T KOG2865|consen 182 -----VKSPSRMLRSKAAGEEAVRDAFPEA-TIIRP---ADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVV 252 (391)
T ss_pred -----ccChHHHHHhhhhhHHHHHhhCCcc-eeech---hhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEe
Confidence 2234557778888999999887765 69998 4778865422222221 112344444 3456689999
Q ss_pred HHHHHHHHHHhhcccCCcchhhccc
Q psy17679 275 LVVNSMISIAWSIGESGKVEKAINK 299 (303)
Q Consensus 275 D~a~ai~~~~~~~~~~~~~~~~~~~ 299 (303)
|+|.+|+.++++|...+..++++.+
T Consensus 253 DVaa~IvnAvkDp~s~Gktye~vGP 277 (391)
T KOG2865|consen 253 DVAAAIVNAVKDPDSMGKTYEFVGP 277 (391)
T ss_pred hHHHHHHHhccCccccCceeeecCC
Confidence 9999999999999998888877543
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-16 Score=137.73 Aligned_cols=206 Identities=14% Similarity=0.115 Sum_probs=131.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEE-EeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYL-LVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~-~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
|++++++||||+|+||+++++.|++.|++ |++ +.|+.... .+..+++.. ...++.++.+|+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~---v~~~~~r~~~~~--~~~~~~~~~-------------~~~~~~~~~~D~ 63 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYD---IAVNYARSRKAA--EETAEEIEA-------------LGRKALAVKANV 63 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHHHH--HHHHHHHHh-------------cCCeEEEEEcCC
Confidence 45689999999999999999999999987 544 46653211 111111111 124688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceecccc-------ccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRFD-------EHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~-------~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
++++ ++..+++ .+|+|||+||..... ..+...+++|+.++..+++++.+. .+.++||
T Consensus 64 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 137 (250)
T PRK08063 64 GDVE------KIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKII 137 (250)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEE
Confidence 9976 4555444 589999999964321 123456788999998888888753 2456999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH-HHHHHHHhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI-GMLVGIATGV 256 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~-~~~~~~~~~~ 256 (303)
++||..+.. +...+..|..+|...+.+.+.+...+ . ++++||.+.+..... .....+....
T Consensus 138 ~~sS~~~~~------------~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~ 205 (250)
T PRK08063 138 SLSSLGSIR------------YLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDA 205 (250)
T ss_pred EEcchhhcc------------CCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHH
Confidence 999974432 22345567888888888887765432 2 678898664322100 0000000000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
... .....+++.+|+|++++.++.++.
T Consensus 206 ~~~-----~~~~~~~~~~dva~~~~~~~~~~~ 232 (250)
T PRK08063 206 RAK-----TPAGRMVEPEDVANAVLFLCSPEA 232 (250)
T ss_pred hcC-----CCCCCCcCHHHHHHHHHHHcCchh
Confidence 000 011236899999999999987654
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.6e-16 Score=138.79 Aligned_cols=210 Identities=13% Similarity=0.047 Sum_probs=133.0
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|++.|+. |++++|.... .+++... + ....++.++++|+
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~---v~~~~~~~~~------~~~~~~~-----~-----~~~~~~~~~~~Dl 75 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAK---VCIVDLQDDL------GQNVCDS-----L-----GGEPNVCFFHCDV 75 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCE---EEEEeCCHHH------HHHHHHH-----h-----cCCCceEEEEeec
Confidence 466799999999999999999999999987 8888886421 1111110 0 0124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc---------cccHHHHHhhhHHHHHHHHHHHHhc---CCCce
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF---------DEHIKMAVKINVCGVQAMLQLAREM---KDLKA 181 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~---------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r 181 (303)
+|.+ ++..+++ ++|++||+||.... ...+...+++|+.++..+++++.+. .+..+
T Consensus 76 ~d~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ 149 (280)
T PLN02253 76 TVED------DVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGS 149 (280)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCce
Confidence 9976 4555444 68999999997432 1335678999999999988877643 13468
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccCh----H-HHHH
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGP----I-GMLV 250 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~----~-~~~~ 250 (303)
+|++||..+.... .....|..+|...+.+.+.+...+. +.+.||.+.+.... . ....
T Consensus 150 ii~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~ 217 (280)
T PLN02253 150 IVSLCSVASAIGG------------LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTE 217 (280)
T ss_pred EEEecChhhcccC------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchh
Confidence 9999998553211 1123466778888888877655432 67779876443211 0 0001
Q ss_pred HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 251 GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
....................++++|+|++++.++...
T Consensus 218 ~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~ 254 (280)
T PLN02253 218 DALAGFRAFAGKNANLKGVELTVDDVANAVLFLASDE 254 (280)
T ss_pred hhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCcc
Confidence 1111110000000011123478999999999988754
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.7e-16 Score=137.36 Aligned_cols=208 Identities=14% Similarity=0.122 Sum_probs=128.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
++++++|||||+|++|++++++|++.|++ |++++|+... ...+.+... ....++.++.+|++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~---v~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~d~~ 62 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAK---VAVFDLNREA---AEKVAADIR------------AKGGNAQAFACDIT 62 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEecCCHHH---HHHHHHHHH------------hcCCcEEEEEcCCC
Confidence 35789999999999999999999999987 8888887532 111111111 01246889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++..+++ ++|+|||++|.... ...+...+++|+.++..+++++... .+.++||+
T Consensus 63 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~ 136 (250)
T TIGR03206 63 DRD------SVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVN 136 (250)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 876 4444443 68999999996432 1223567889999999988877531 15679999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhh-h
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGV-L 257 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~-~ 257 (303)
+||..+.... .....|..+|...+.+.+.+...+ . ++++||++.+..... ......... .
T Consensus 137 iss~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~-~~~~~~~~~~~ 203 (250)
T TIGR03206 137 IASDAARVGS------------SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDD-ICGGAENPEKL 203 (250)
T ss_pred ECchhhccCC------------CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHh-hhhccCChHHH
Confidence 9998554321 123346666766666666554332 2 788898664332111 000000000 0
Q ss_pred -hhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 258 -HTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 258 -~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
..... ......+...+|+|+++..++..+
T Consensus 204 ~~~~~~-~~~~~~~~~~~dva~~~~~l~~~~ 233 (250)
T TIGR03206 204 REAFTR-AIPLGRLGQPDDLPGAILFFSSDD 233 (250)
T ss_pred HHHHHh-cCCccCCcCHHHHHHHHHHHcCcc
Confidence 00000 001122567899999999988765
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.2e-16 Score=136.62 Aligned_cols=202 Identities=11% Similarity=0.041 Sum_probs=134.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||.++++.|++.|++ |+++.|++.... ...+++.. ...++.++.+|++
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~---v~~~~r~~~~~~--~~~~~~~~-------------~~~~~~~~~~Dl~ 66 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGAT---VAFNDGLAAEAR--ELAAALEA-------------AGGRAHAIAADLA 66 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCE---EEEEeCCHHHHH--HHHHHHHh-------------cCCcEEEEEccCC
Confidence 56799999999999999999999999987 888888643211 11111111 1247889999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++..++ .++|+|||++|.... ...+...++.|+.++.++++.+.+. .+..+||+
T Consensus 67 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 140 (250)
T PRK12939 67 DPA------SVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVN 140 (250)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 876 454444 368999999997532 1234567788999999998887653 13459999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH----HHHHHHHh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI----GMLVGIAT 254 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~----~~~~~~~~ 254 (303)
+||..+... ...+..|..+|...+.+.+.+...+ . ..+.||++.+..... .+.....
T Consensus 141 isS~~~~~~------------~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~- 207 (250)
T PRK12939 141 LASDTALWG------------APKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYL- 207 (250)
T ss_pred ECchhhccC------------CCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHH-
Confidence 999854321 2234457777777888777654332 2 677898764432211 1111111
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.......+++++|+|++++.++..+.
T Consensus 208 --------~~~~~~~~~~~~dva~~~~~l~~~~~ 233 (250)
T PRK12939 208 --------KGRALERLQVPDDVAGAVLFLLSDAA 233 (250)
T ss_pred --------hcCCCCCCCCHHHHHHHHHHHhCccc
Confidence 11223457899999999999997653
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.4e-16 Score=136.70 Aligned_cols=203 Identities=12% Similarity=0.120 Sum_probs=132.4
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+++||||||+|++|+++++.|++.|+. |++++|+.... .+..+++.. ...++.++.+|+.+.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~---Vi~~~r~~~~~--~~~~~~l~~-------------~~~~~~~~~~Dl~~~ 62 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQ---LVLAARNETRL--ASLAQELAD-------------HGGEALVVPTDVSDA 62 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHh-------------cCCcEEEEEccCCCH
Confidence 368999999999999999999999987 88888874321 111111111 124788899999997
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcceecccc---c-----cHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEEe
Q psy17679 124 GLGLSETDRATLVK-------QVNIVFHGAATVRFD---E-----HIKMAVKINVCGVQAMLQLAREM--KDLKAFVHVS 186 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~---~-----~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~iS 186 (303)
+ .+..+++ ++|+|||++|..... . .+...+++|+.++.++++.+... .+..++|++|
T Consensus 63 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~s 136 (263)
T PRK06181 63 E------ACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVS 136 (263)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 6 4554443 689999999975421 1 13566889999999999888642 1347899999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhhhhc
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVLHTH 260 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~ 260 (303)
|..+.. +......|..+|...+.+.+.+... .. ++++||++.+....... . ..+.. .
T Consensus 137 S~~~~~------------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~-~--~~~~~--~ 199 (263)
T PRK06181 137 SLAGLT------------GVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRAL-D--GDGKP--L 199 (263)
T ss_pred cccccC------------CCCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhc-c--ccccc--c
Confidence 985542 1223455777787777777655332 22 67889876543321100 0 01111 1
Q ss_pred cCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 261 LINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 261 ~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...+.....+++++|+|++++.++...
T Consensus 200 ~~~~~~~~~~~~~~dva~~i~~~~~~~ 226 (263)
T PRK06181 200 GKSPMQESKIMSAEECAEAILPAIARR 226 (263)
T ss_pred ccccccccCCCCHHHHHHHHHHHhhCC
Confidence 111222347899999999999999854
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.4e-16 Score=135.79 Aligned_cols=193 Identities=13% Similarity=0.086 Sum_probs=127.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++||||+|+||+++++.|++.|+. |.+.+|++. .++++... ..++.++.+|++
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~---v~~~~r~~~------~~~~~~~~-------------~~~~~~~~~D~~ 60 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGAR---VAIGDLDEA------LAKETAAE-------------LGLVVGGPLDVT 60 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-------------hccceEEEccCC
Confidence 45689999999999999999999999987 888888643 12111110 024778999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++..++ ..+|++|||||.... ...+...+++|+.++..+++.+.+. .+..+||+
T Consensus 61 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~ 134 (273)
T PRK07825 61 DPA------SFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVN 134 (273)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 876 333333 368999999997532 1234667889999988887776542 25679999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhC----cCCc--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMT----PNRV--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~----~~~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+... ......|..+|...+.+.+.+. .... ++++||++.+.+. .+.
T Consensus 135 isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~---------~~~-- 191 (273)
T PRK07825 135 VASLAGKIP------------VPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELI---------AGT-- 191 (273)
T ss_pred EcCccccCC------------CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhh---------ccc--
Confidence 999965432 1223445566655555544432 2223 7888986643321 010
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.......++..+|+|++++.++.++..
T Consensus 192 ----~~~~~~~~~~~~~va~~~~~~l~~~~~ 218 (273)
T PRK07825 192 ----GGAKGFKNVEPEDVAAAIVGTVAKPRP 218 (273)
T ss_pred ----ccccCCCCCCHHHHHHHHHHHHhCCCC
Confidence 011223478999999999999987654
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.3e-16 Score=134.94 Aligned_cols=204 Identities=14% Similarity=0.148 Sum_probs=130.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|++|+|+||||+|++|.++++.|+++|++ |++++|++.... .+..... ....++.++.+|+.
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~---v~~~~r~~~~~~---~~~~~~~------------~~~~~~~~~~~D~~ 64 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGAK---VVIYDSNEEAAE---ALAAELR------------AAGGEARVLVFDVS 64 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCChhHHH---HHHHHHH------------hcCCceEEEEccCC
Confidence 45589999999999999999999999987 889999754211 1111111 11256888999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceecccc-------ccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRFD-------EHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~-------~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
++. ++..+++ .+|+|||++|..... ..+...++.|+.+..++++.+.+. .+.++||+
T Consensus 65 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~ 138 (246)
T PRK05653 65 DEA------AVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVN 138 (246)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 876 4444443 569999999875431 123567888999999988888532 25689999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+... ......|..+|...+.+.+.+... .. ++++||++.+.... ............
T Consensus 139 ~ss~~~~~~------------~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~-~~~~~~~~~~~~ 205 (246)
T PRK05653 139 ISSVSGVTG------------NPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE-GLPEEVKAEILK 205 (246)
T ss_pred ECcHHhccC------------CCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh-hhhHHHHHHHHh
Confidence 999854321 122334556666666666655432 22 78889865332211 111111111111
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.-....+++++|+|++++.++...
T Consensus 206 -----~~~~~~~~~~~dva~~~~~~~~~~ 229 (246)
T PRK05653 206 -----EIPLGRLGQPEEVANAVAFLASDA 229 (246)
T ss_pred -----cCCCCCCcCHHHHHHHHHHHcCch
Confidence 111245788999999999998653
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.8e-16 Score=133.83 Aligned_cols=197 Identities=11% Similarity=0.101 Sum_probs=131.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++||||+|++|.+++++|++.|++ |++++|+.... .+..+++.. ...++.++.+|++
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~---Vi~~~r~~~~~--~~~~~~~~~-------------~~~~~~~~~~D~~ 66 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVN---VGLLARTEENL--KAVAEEVEA-------------YGVKVVIATADVS 66 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHH-------------hCCeEEEEECCCC
Confidence 45689999999999999999999999987 88899975321 111111111 1247889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++..+++ .+|+|||++|.... ...+...+++|+.++.++++.+... .+.+++|+
T Consensus 67 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 140 (239)
T PRK07666 67 DYE------EVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIIN 140 (239)
T ss_pred CHH------HHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEE
Confidence 876 4555544 68999999997432 1234567899999998888877642 25678999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+... ......|..+|...+.+.+.+... .. ++++||.+.+.+.... +.
T Consensus 141 ~ss~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~-------~~-- 199 (239)
T PRK07666 141 ISSTAGQKG------------AAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL-------GL-- 199 (239)
T ss_pred EcchhhccC------------CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc-------cc--
Confidence 999854422 112334566666666666554322 22 7788987654432111 00
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
. ......++..+|+|+.++.++.++
T Consensus 200 --~--~~~~~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 200 --T--DGNPDKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred --c--ccCCCCCCCHHHHHHHHHHHHhCC
Confidence 0 111234688999999999999865
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.2e-16 Score=135.43 Aligned_cols=206 Identities=13% Similarity=0.065 Sum_probs=130.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++||||||+|++|++++++|++.|++ |++++|.... ..+.+.+.+.. .....+.++.+|++
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~---v~~~~r~~~~--~~~~~~~~~~~-----------~~~~~~~~~~~Dl~ 67 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYR---VAIHYHRSAA--EADALAAELNA-----------LRPGSAAALQADLL 67 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHH--HHHHHHHHHHh-----------hcCCceEEEEcCCC
Confidence 35589999999999999999999999987 8888886431 11111111110 00135788999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVHV 185 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~i 185 (303)
+.+ .+..+++ .+|+|||+||.... ...++..+++|+.++.++++++... ....+++++
T Consensus 68 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~ 141 (249)
T PRK09135 68 DPD------ALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNI 141 (249)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEE
Confidence 876 4555544 57999999996431 2235678889999999999998653 123466666
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecceecCccChHHHHHHHHhhhhhhc
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGWIDNVYGPIGMLVGIATGVLHTH 260 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~ 260 (303)
++..+. .|..+...|..+|...|.+++.+...+ . ++++||++.+......+ .........
T Consensus 142 ~~~~~~------------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~-~~~~~~~~~-- 206 (249)
T PRK09135 142 TDIHAE------------RPLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSF-DEEARQAIL-- 206 (249)
T ss_pred eChhhc------------CCCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccC-CHHHHHHHH--
Confidence 664332 234456678888888998888765432 2 77888866444321111 111111000
Q ss_pred cCCCCccccceehhHHHHHHHHHHhh
Q psy17679 261 LINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 261 ~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
. ......+.+++|+|+++..++..
T Consensus 207 ~--~~~~~~~~~~~d~a~~~~~~~~~ 230 (249)
T PRK09135 207 A--RTPLKRIGTPEDIAEAVRFLLAD 230 (249)
T ss_pred h--cCCcCCCcCHHHHHHHHHHHcCc
Confidence 0 00111234689999999776653
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.7e-16 Score=130.62 Aligned_cols=193 Identities=13% Similarity=0.134 Sum_probs=122.6
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|+++||||+|++|+++++.|+++ ++ |++++|++.. .+++... ...+.++++|+++
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~---V~~~~r~~~~------~~~~~~~-------------~~~~~~~~~D~~~ 58 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT-HT---LLLGGRPAER------LDELAAE-------------LPGATPFPVDLTD 58 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh-CC---EEEEeCCHHH------HHHHHHH-------------hccceEEecCCCC
Confidence 3578999999999999999999998 76 9999997431 1111110 1357789999999
Q ss_pred CCCCCCHHHHHHHhc---cccEEEEcceecccc-------ccHHHHHhhhHHHHHHHHHH----HHhcCCCceEEEEeCC
Q psy17679 123 PGLGLSETDRATLVK---QVNIVFHGAATVRFD-------EHIKMAVKINVCGVQAMLQL----AREMKDLKAFVHVSTA 188 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~---~~dvVi~~a~~~~~~-------~~~~~~~~~N~~~~~~ll~~----a~~~~~~~r~i~iSS~ 188 (303)
.+ ++..+++ ++|+|||++|..... ..+...+++|+.+...+.+. +.+ ...++|++||.
T Consensus 59 ~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~v~~ss~ 130 (227)
T PRK08219 59 PE------AIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA--AHGHVVFINSG 130 (227)
T ss_pred HH------HHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCeEEEEcch
Confidence 76 5666665 699999999975421 22445678888885555444 444 34689999998
Q ss_pred cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC--C-c--EEeecceecCccChHHHHHHHHhhhhhhccCC
Q psy17679 189 FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN--R-V--HISGTGWIDNVYGPIGMLVGIATGVLHTHLIN 263 (303)
Q Consensus 189 ~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~--~-~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (303)
.+.... .....|..+|...+.+.+.+... . . ..+.||.+.+ +. ........ +.
T Consensus 131 ~~~~~~------------~~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~---~~--~~~~~~~~-----~~ 188 (227)
T PRK08219 131 AGLRAN------------PGWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDT---DM--QRGLVAQE-----GG 188 (227)
T ss_pred HhcCcC------------CCCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccc---hH--hhhhhhhh-----cc
Confidence 654321 12334556666666666654322 1 2 5666775422 11 01111110 11
Q ss_pred CCccccceehhHHHHHHHHHHhhcc
Q psy17679 264 LNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 264 ~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+++++|+|++++.++..+.
T Consensus 189 ~~~~~~~~~~~dva~~~~~~l~~~~ 213 (227)
T PRK08219 189 EYDPERYLRPETVAKAVRFAVDAPP 213 (227)
T ss_pred ccCCCCCCCHHHHHHHHHHHHcCCC
Confidence 1123468999999999999998654
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.2e-16 Score=136.70 Aligned_cols=198 Identities=12% Similarity=0.119 Sum_probs=130.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|++.|+. |++++|+.... .++.++.+|++
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~---Vi~~~r~~~~~--------------------------~~~~~~~~D~~ 54 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSN---VINFDIKEPSY--------------------------NDVDYFKVDVS 54 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCCcccc--------------------------CceEEEEccCC
Confidence 56789999999999999999999999987 88888875311 36778999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+++ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. .+..+||+
T Consensus 55 ~~~------~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 128 (258)
T PRK06398 55 NKE------QVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIIN 128 (258)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 976 4444443 68999999997432 2345677899999998888877542 25579999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecceecCccChHHHH------HHHH
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGWIDNVYGPIGML------VGIA 253 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~~~~~~g~~~~~------~~~~ 253 (303)
+||..+... ......|..+|...+.+.+.+...+ . +.+.||++.+.+...... ....
T Consensus 129 isS~~~~~~------------~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~ 196 (258)
T PRK06398 129 IASVQSFAV------------TRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHV 196 (258)
T ss_pred eCcchhccC------------CCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhh
Confidence 999855421 1233456677777777777654433 2 677898775433211000 0000
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.... ..+........+...+|+|+++++++...
T Consensus 197 ~~~~-~~~~~~~~~~~~~~p~eva~~~~~l~s~~ 229 (258)
T PRK06398 197 ERKI-REWGEMHPMKRVGKPEEVAYVVAFLASDL 229 (258)
T ss_pred HHHH-HhhhhcCCcCCCcCHHHHHHHHHHHcCcc
Confidence 0000 00111111223568999999999988754
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.9e-16 Score=137.58 Aligned_cols=204 Identities=13% Similarity=0.085 Sum_probs=133.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++|+||||+|+||+++++.|++.|+. |++++|+.... +...++ . ..++.++.+|++
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~---Vi~~~r~~~~~---~~~~~~-~--------------~~~~~~~~~Dl~ 71 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGAR---VALLDRSEDVA---EVAAQL-L--------------GGNAKGLVCDVS 71 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHHHh-h--------------CCceEEEEecCC
Confidence 56789999999999999999999999987 88889875311 111111 0 145678999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++..+++ ++|+|||++|.... ...+...+++|+.++.++++++... .+..+||+
T Consensus 72 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 145 (255)
T PRK06841 72 DSQ------SVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVN 145 (255)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEE
Confidence 876 4444443 67999999997532 1234567889999999999887653 24679999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+... ......|..+|...+.+.+.++..+ . +.+.||++.+......+.......
T Consensus 146 ~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~--- 210 (255)
T PRK06841 146 LASQAGVVA------------LERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGER--- 210 (255)
T ss_pred EcchhhccC------------CCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHH---
Confidence 999854321 1123346667777777666654432 2 677898775544321110000000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
+........+.+.+|+|++++.++..+..
T Consensus 211 --~~~~~~~~~~~~~~~va~~~~~l~~~~~~ 239 (255)
T PRK06841 211 --AKKLIPAGRFAYPEEIAAAALFLASDAAA 239 (255)
T ss_pred --HHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 00111123478999999999999876543
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.9e-16 Score=135.30 Aligned_cols=210 Identities=11% Similarity=0.039 Sum_probs=135.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++++++||||+|+||+++++.|++.|+. |++++|+++.. +..+++.. ...++.++.+|+
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G~~---v~~~~r~~~~~---~~~~~~~~-------------~~~~~~~~~~D~ 64 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEGAI---PVIFGRSAPDD---EFAEELRA-------------LQPRAEFVQVDL 64 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcCCc---EEEEcCChhhH---HHHHHHHh-------------cCCceEEEEccC
Confidence 367789999999999999999999999987 88888876432 12222211 124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVHV 185 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~i 185 (303)
++.+ ++..+++ .+|+|||+||.... ...+...+++|+.+...+.+.+.+. ....+||++
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ 138 (258)
T PRK08628 65 TDDA------QCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNI 138 (258)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEE
Confidence 9876 4544443 68999999996321 1345677889999999888887642 134689999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhh--hh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATG--VL 257 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~--~~ 257 (303)
||..+... ......|..+|...+.+.+.+... .. +.++||.+.+..... ........ ..
T Consensus 139 ss~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~ 205 (258)
T PRK08628 139 SSKTALTG------------QGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN-WIATFDDPEAKL 205 (258)
T ss_pred CCHHhccC------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHH-HhhhccCHHHHH
Confidence 99855421 123456777888888888876532 22 677888654332111 11000000 00
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
............++..+|+|+++++++....
T Consensus 206 ~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 236 (258)
T PRK08628 206 AAITAKIPLGHRMTTAEEIADTAVFLLSERS 236 (258)
T ss_pred HHHHhcCCccccCCCHHHHHHHHHHHhChhh
Confidence 0011011111246789999999999998653
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.9e-16 Score=138.85 Aligned_cols=199 Identities=13% Similarity=0.163 Sum_probs=132.6
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++++++||||+|+||+++++.|+++|+. |++++|+..... ...++.++++|++|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~---V~~~~r~~~~~~-----------------------~~~~~~~~~~D~~d 56 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYR---VFGTSRNPARAA-----------------------PIPGVELLELDVTD 56 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCE---EEEEeCChhhcc-----------------------ccCCCeeEEeecCC
Confidence 4578999999999999999999999987 889999753211 01478899999999
Q ss_pred CCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEEE
Q psy17679 123 PGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFVH 184 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i~ 184 (303)
.+ ++..+++ .+|+||||||.... ...+...+++|+.++..+++.+. +. +.++||+
T Consensus 57 ~~------~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~ 129 (270)
T PRK06179 57 DA------SVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ-GSGRIIN 129 (270)
T ss_pred HH------HHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEE
Confidence 77 5555554 57999999997532 22356788999999988888764 33 6789999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHH-----HH--HH
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIG-----ML--VG 251 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~-----~~--~~ 251 (303)
+||.++... ......|..+|...+.+.+.+... .. ++++||++.+.+.... .. ..
T Consensus 130 isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~ 197 (270)
T PRK06179 130 ISSVLGFLP------------APYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYD 197 (270)
T ss_pred ECCccccCC------------CCCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhH
Confidence 999865432 223445777777777777765332 22 7888987754432110 00 00
Q ss_pred HHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 252 IATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........... .........+++|+.++.++..+.
T Consensus 198 ~~~~~~~~~~~--~~~~~~~~~~~va~~~~~~~~~~~ 232 (270)
T PRK06179 198 RERAVVSKAVA--KAVKKADAPEVVADTVVKAALGPW 232 (270)
T ss_pred HHHHHHHHHHH--hccccCCCHHHHHHHHHHHHcCCC
Confidence 00000000000 011124677999999999988664
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.3e-16 Score=135.29 Aligned_cols=207 Identities=12% Similarity=0.108 Sum_probs=129.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEE-eCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLL-VRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~-~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++++++||||+|+||+++++.|++.|+. |.++ .|+.. .++++... +. ....++.++.+|+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~---v~i~~~r~~~------~~~~~~~~-----~~----~~~~~~~~~~~D~ 65 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGAL---VAIHYGRNKQ------AADETIRE-----IE----SNGGKAFLIEADL 65 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHH------HHHHHHHH-----HH----hcCCcEEEEEcCc
Confidence 55689999999999999999999999987 6554 56432 11111110 00 0114678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------------cccEEEEcceecccc-------ccHHHHHhhhHHHHHHHHHHHHhc-CCC
Q psy17679 121 SLPGLGLSETDRATLVK-------------QVNIVFHGAATVRFD-------EHIKMAVKINVCGVQAMLQLAREM-KDL 179 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------------~~dvVi~~a~~~~~~-------~~~~~~~~~N~~~~~~ll~~a~~~-~~~ 179 (303)
+|.+ ++..+++ ++|++||+||..... ..+...+++|+.++.++++.+.+. ...
T Consensus 66 ~d~~------~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 139 (254)
T PRK12746 66 NSID------GVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE 139 (254)
T ss_pred CCHH------HHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC
Confidence 9976 4544443 589999999975321 123567789999999999988764 234
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIA 253 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~ 253 (303)
.+||++||..+... ......|..+|...+.+.+.+...+ . ++++||++.+.........
T Consensus 140 ~~~v~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~--- 204 (254)
T PRK12746 140 GRVINISSAEVRLG------------FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDD--- 204 (254)
T ss_pred CEEEEECCHHhcCC------------CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccC---
Confidence 58999999865421 2233456777777777766554322 2 6778986643321100000
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...............+++++|+|+++..++.++.
T Consensus 205 -~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 238 (254)
T PRK12746 205 -PEIRNFATNSSVFGRIGQVEDIADAVAFLASSDS 238 (254)
T ss_pred -hhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccc
Confidence 0000000011112356799999999998887653
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.4e-16 Score=133.05 Aligned_cols=195 Identities=11% Similarity=0.039 Sum_probs=128.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|++|+++++.|++.|+. |++++|++... .+.++++.. ..+.++.+|+.
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~~---v~~~~r~~~~~--~~~~~~~~~---------------~~~~~~~~D~~ 64 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGAR---VALIGRGAAPL--SQTLPGVPA---------------DALRIGGIDLV 64 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCCe---EEEEeCChHhH--HHHHHHHhh---------------cCceEEEeecC
Confidence 45789999999999999999999999987 99999975321 111111111 35677889999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.. ++..+++ ++|+|||+++.... ...+...++.|+.++..+++++.+. .+.++||+
T Consensus 65 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~ 138 (239)
T PRK12828 65 DPQ------AARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVN 138 (239)
T ss_pred CHH------HHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEE
Confidence 866 4444443 68999999996432 1223566788999999988877532 26789999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+.... .....|..+|...+.+++.+... .. .+++||++.+.....
T Consensus 139 ~sS~~~~~~~------------~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~------------ 194 (239)
T PRK12828 139 IGAGAALKAG------------PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA------------ 194 (239)
T ss_pred ECchHhccCC------------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh------------
Confidence 9998554321 12334556666666666554332 22 677887654331100
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+ ......|++++|+|++++.++.+..
T Consensus 195 ~~~--~~~~~~~~~~~dva~~~~~~l~~~~ 222 (239)
T PRK12828 195 DMP--DADFSRWVTPEQIAAVIAFLLSDEA 222 (239)
T ss_pred cCC--chhhhcCCCHHHHHHHHHHHhCccc
Confidence 001 1122347999999999999998653
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.2e-16 Score=132.54 Aligned_cols=205 Identities=12% Similarity=0.068 Sum_probs=130.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|++ |++++|..... .+..+++... +. ....++.++.+|+.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~---v~~~~~~~~~~--~~~~~~~~~~-----~~----~~~~~~~~~~~Dl~ 69 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGAD---VIVLDIHPMRG--RAEADAVAAG-----IE----AAGGKALGLAFDVR 69 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEcCccccc--HHHHHHHHHH-----HH----hcCCcEEEEEccCC
Confidence 45689999999999999999999999998 77777643221 1122221111 00 11247889999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH-----hcCCCceE
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR-----EMKDLKAF 182 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~-----~~~~~~r~ 182 (303)
+.+ .+..++ .++|+|||++|.... ...+...+++|+.++.++++++. +. +.++|
T Consensus 70 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i 142 (249)
T PRK12827 70 DFA------ATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR-RGGRI 142 (249)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CCeEE
Confidence 976 444444 368999999997542 12345678899999999999987 33 56789
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGV 256 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~ 256 (303)
|++||..+... ...+..|..+|...+.+.+.+...+ . ++++||++.+..............
T Consensus 143 v~~sS~~~~~~------------~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~- 209 (249)
T PRK12827 143 VNIASVAGVRG------------NRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLN- 209 (249)
T ss_pred EEECCchhcCC------------CCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHh-
Confidence 99999854322 1123346666766666666554332 2 788898765433211111111100
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
. .....+.+.+|+|++++.++...
T Consensus 210 --~-----~~~~~~~~~~~va~~~~~l~~~~ 233 (249)
T PRK12827 210 --P-----VPVQRLGEPDEVAALVAFLVSDA 233 (249)
T ss_pred --h-----CCCcCCcCHHHHHHHHHHHcCcc
Confidence 0 01112458899999999888654
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.8e-16 Score=135.85 Aligned_cols=206 Identities=15% Similarity=0.173 Sum_probs=133.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+||||||+|+||+++++.|+++|+. |++++|++.. .+.+.+.... ...++.++.+|++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~------------~~~~~~~~~~D~~ 64 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGAD---VVLAARTAER---LDEVAAEIDD------------LGRRALAVPTDIT 64 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHHHH------------hCCceEEEecCCC
Confidence 56789999999999999999999999997 8888987531 1112111110 0146789999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEE
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~ 184 (303)
+.+ .+..++ .++|+|||+||.... ...+...+++|+.++..+++++.+. ....+||+
T Consensus 65 ~~~------~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~ 138 (258)
T PRK07890 65 DED------QCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVM 138 (258)
T ss_pred CHH------HHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEE
Confidence 876 444333 368999999986422 2345678899999999999988753 12358999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH--HHHHHHhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG--MLVGIATGV 256 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~--~~~~~~~~~ 256 (303)
+||..+.. +...+..|..+|...+.+.+.+...+ . ++++||.+ +++.. .+.......
T Consensus 139 ~sS~~~~~------------~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v---~~~~~~~~~~~~~~~~ 203 (258)
T PRK07890 139 INSMVLRH------------SQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYI---WGDPLKGYFRHQAGKY 203 (258)
T ss_pred Eechhhcc------------CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCcc---CcHHHHHHhhhccccc
Confidence 99985432 22234457777777888877765432 2 67888855 44321 111110000
Q ss_pred -------hhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 257 -------LHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 257 -------~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...+. .......+.+++|+|++++.++...
T Consensus 204 ~~~~~~~~~~~~-~~~~~~~~~~~~dva~a~~~l~~~~ 240 (258)
T PRK07890 204 GVTVEQIYAETA-ANSDLKRLPTDDEVASAVLFLASDL 240 (258)
T ss_pred CCCHHHHHHHHh-hcCCccccCCHHHHHHHHHHHcCHh
Confidence 00000 0111234678999999999988754
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.5e-16 Score=135.26 Aligned_cols=212 Identities=13% Similarity=0.079 Sum_probs=129.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+||||+|+||+++++.|++.|++ |+++.|+.... .+..+++... .....+.++.+|++
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~---v~~~~r~~~~~--~~~~~~l~~~-----------~~~~~~~~~~~Dl~ 65 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGI---VIAADIDKEAL--NELLESLGKE-----------FKSKKLSLVELDIT 65 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEecChHHH--HHHHHHHHhh-----------cCCCceeEEEecCC
Confidence 46789999999999999999999999987 88888864321 1111111110 00135667899999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc----------cccHHHHHhhhHHHHHHHHHHHHhc---CCCce
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF----------DEHIKMAVKINVCGVQAMLQLAREM---KDLKA 181 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~----------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r 181 (303)
|++ ++..+++ .+|+|||||+.... ...+...+++|+.+...+++++.+. .+.++
T Consensus 66 d~~------~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 139 (256)
T PRK09186 66 DQE------SLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGN 139 (256)
T ss_pred CHH------HHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCce
Confidence 977 4555554 38999999975321 1234567788888877666655432 25679
Q ss_pred EEEEeCCcccCCC-CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHh
Q psy17679 182 FVHVSTAFTHCPR-ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIAT 254 (303)
Q Consensus 182 ~i~iSS~~~~~~~-~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~ 254 (303)
||++||.++.... ....+.. +......|..+|...+.+.+.+...+ . ++++||.+.+... ..+.. ...
T Consensus 140 iv~~sS~~~~~~~~~~~~~~~---~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-~~~~~-~~~ 214 (256)
T PRK09186 140 LVNISSIYGVVAPKFEIYEGT---SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-EAFLN-AYK 214 (256)
T ss_pred EEEEechhhhccccchhcccc---ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-HHHHH-HHH
Confidence 9999998654321 1111111 11112246677777777776444322 2 7888986543221 11111 111
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. .. ....+++++|+|++++.++.+..
T Consensus 215 ~---~~-----~~~~~~~~~dva~~~~~l~~~~~ 240 (256)
T PRK09186 215 K---CC-----NGKGMLDPDDICGTLVFLLSDQS 240 (256)
T ss_pred h---cC-----CccCCCCHHHhhhhHhheecccc
Confidence 1 11 11247899999999999997654
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.8e-16 Score=134.22 Aligned_cols=208 Identities=14% Similarity=0.042 Sum_probs=130.5
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+++||||||+|+||+++++.|++.|+. |++++|+... .+.+.+... ....++.++.+|+++.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~---v~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~~~~ 63 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHN---VIAGVQIAPQ---VTALRAEAA------------RRGLALRVEKLDLTDA 63 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCcceEEEeeCCCH
Confidence 468999999999999999999999987 8889986431 111111111 1124688999999997
Q ss_pred CCCCCHHHHHHHhc-cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHH----HhcCCCceEEEEeCCccc
Q psy17679 124 GLGLSETDRATLVK-QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLA----REMKDLKAFVHVSTAFTH 191 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a----~~~~~~~r~i~iSS~~~~ 191 (303)
. .+..++. ++|+||||||.... ...+...+++|+.++..+.+.+ .+. +.++||++||..+.
T Consensus 64 ~------~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~SS~~~~ 136 (257)
T PRK09291 64 I------DRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GKGKVVFTSSMAGL 136 (257)
T ss_pred H------HHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEcChhhc
Confidence 6 6777666 89999999997532 1224567788998877666544 344 55799999998553
Q ss_pred CCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHH--HHHHHhhhhhhc-cC
Q psy17679 192 CPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGM--LVGIATGVLHTH-LI 262 (303)
Q Consensus 192 ~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~--~~~~~~~~~~~~-~~ 262 (303)
... .....|..+|...|.+.+.+... .. ++++||++...+..... ...........+ ..
T Consensus 137 ~~~------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~ 204 (257)
T PRK09291 137 ITG------------PFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPE 204 (257)
T ss_pred cCC------------CCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhh
Confidence 221 12345667777788777655432 22 78889876543321110 001000000000 01
Q ss_pred CCCccccceehhHHHHHHHHHHhhcc
Q psy17679 263 NLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 263 ~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.......++..+|+++.++.++..+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~l~~~~ 230 (257)
T PRK09291 205 DLAFPLEQFDPQEMIDAMVEVIPADT 230 (257)
T ss_pred hhhccccCCCHHHHHHHHHHHhcCCC
Confidence 11223345789999999998886543
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.4e-16 Score=135.86 Aligned_cols=210 Identities=11% Similarity=0.107 Sum_probs=130.4
Q ss_pred cccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEE
Q psy17679 38 MQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVA 117 (303)
Q Consensus 38 ~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~ 117 (303)
+...++++++|||||+|++|+++++.|+++|+. |+++.|++... +.+.+... ..++.++.
T Consensus 5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~---V~~~~r~~~~~---~~~~~~~~--------------~~~~~~~~ 64 (264)
T PRK12829 5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGAR---VHVCDVSEAAL---AATAARLP--------------GAKVTATV 64 (264)
T ss_pred HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHHHHHh--------------cCceEEEE
Confidence 444577899999999999999999999999987 88999974321 11111110 02568899
Q ss_pred ecCCCCCCCCCHHHHHHHh-------ccccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCC
Q psy17679 118 GDCSLPGLGLSETDRATLV-------KQVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDL 179 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~ 179 (303)
+|+++.. .+..++ .++|+|||++|.... ...+...+++|+.++..+++.+... .+.
T Consensus 65 ~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 138 (264)
T PRK12829 65 ADVADPA------QVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGH 138 (264)
T ss_pred ccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 9999876 444443 378999999997621 1234678899999999988877432 134
Q ss_pred -ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHH
Q psy17679 180 -KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGI 252 (303)
Q Consensus 180 -~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~ 252 (303)
++|+++||.++... ......|..+|...+.+++.+.... . ++++||++.+..... .+...
T Consensus 139 ~~~vv~~ss~~~~~~------------~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~-~~~~~ 205 (264)
T PRK12829 139 GGVIIALSSVAGRLG------------YPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRR-VIEAR 205 (264)
T ss_pred CeEEEEecccccccC------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHH-Hhhhh
Confidence 56888887654321 1122346667777777777654332 2 788898653322111 11100
Q ss_pred Hh--hhh--h--hccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 253 AT--GVL--H--THLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 253 ~~--~~~--~--~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
.. +.. . .-.........+++++|+|++++.++..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~ 245 (264)
T PRK12829 206 AQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASP 245 (264)
T ss_pred hhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 00 000 0 0000011123589999999999988764
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.4e-16 Score=132.98 Aligned_cols=204 Identities=12% Similarity=0.082 Sum_probs=132.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||.+++++|+++|+. |++++|++. +.+.+... ....++.++.+|++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~---vi~~~r~~~-----~~~~~~~~------------~~~~~~~~~~~D~~ 62 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGAD---IVGAGRSEP-----SETQQQVE------------ALGRRFLSLTADLS 62 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCchH-----HHHHHHHH------------hcCCceEEEECCCC
Confidence 56799999999999999999999999987 888888642 11111111 01246889999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC-CceEE
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD-LKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~-~~r~i 183 (303)
+.+ ++..++ .++|++||+||.... ...+...+++|+.++..+++.+.+. ++ ..++|
T Consensus 63 ~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv 136 (248)
T TIGR01832 63 DIE------AIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKII 136 (248)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 976 444333 368999999997532 1245677889999999998887542 13 46899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH-HHHHhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML-VGIATGV 256 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~-~~~~~~~ 256 (303)
++||..+.... .....|..+|...+.+.+.++..+ . +++.||++.+........ .......
T Consensus 137 ~~sS~~~~~~~------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~ 204 (248)
T TIGR01832 137 NIASMLSFQGG------------IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAI 204 (248)
T ss_pred EEecHHhccCC------------CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHH
Confidence 99998544321 122346677777777777665443 2 788898765442110000 0000000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.... ....|+..+|+|++++.++....
T Consensus 205 ~~~~-----~~~~~~~~~dva~~~~~l~s~~~ 231 (248)
T TIGR01832 205 LERI-----PAGRWGTPDDIGGPAVFLASSAS 231 (248)
T ss_pred HhcC-----CCCCCcCHHHHHHHHHHHcCccc
Confidence 0011 12357899999999999987544
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.3e-16 Score=134.36 Aligned_cols=206 Identities=11% Similarity=0.084 Sum_probs=126.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|+++|+. |++++|++. ..+..+++.. ...++.++.+|+
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~---v~~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~D~ 65 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGAR---VVLVDRSEL---VHEVAAELRA-------------AGGEALALTADL 65 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCchH---HHHHHHHHHh-------------cCCeEEEEEEeC
Confidence 467799999999999999999999999987 888888632 1111111111 124677899999
Q ss_pred CCCCCCCCHHHHHHHh-------ccccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHH----hcCCCce
Q psy17679 121 SLPGLGLSETDRATLV-------KQVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKA 181 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r 181 (303)
++.+ ++..++ .++|++|||||.... ...+...+++|+.++..+++.+. +. +..+
T Consensus 66 ~~~~------~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~ 138 (260)
T PRK12823 66 ETYA------GAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-GGGA 138 (260)
T ss_pred CCHH------HHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCe
Confidence 9865 333333 368999999985311 22345677889988876665554 33 5578
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH-HH-----
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG-ML----- 249 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~-~~----- 249 (303)
||++||..+... ....|..+|...+.+.+.++..+ . +.++||++.+...... ..
T Consensus 139 iv~~sS~~~~~~--------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~ 204 (260)
T PRK12823 139 IVNVSSIATRGI--------------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSE 204 (260)
T ss_pred EEEEcCccccCC--------------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccc
Confidence 999999854321 11236677777777777665433 2 6888986644321000 00
Q ss_pred --HHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 250 --VGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 250 --~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
............. .....-+.+++|+|+++++++...
T Consensus 205 ~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~s~~ 243 (260)
T PRK12823 205 QEKAWYQQIVDQTLD-SSLMKRYGTIDEQVAAILFLASDE 243 (260)
T ss_pred cccccHHHHHHHHhc-cCCcccCCCHHHHHHHHHHHcCcc
Confidence 0000000000010 111123568999999999988654
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=5e-16 Score=135.11 Aligned_cols=202 Identities=11% Similarity=0.054 Sum_probs=130.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+||||+|+||+++++.|++.|++ |++++|+.... +++... ...++.++.+|++
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~---v~~~~~~~~~~------~~~~~~------------~~~~~~~~~~Dl~ 66 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQ---VVLADLDRERG------SKVAKA------------LGENAWFIAMDVA 66 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCE---EEEEcCCHHHH------HHHHHH------------cCCceEEEEccCC
Confidence 56789999999999999999999999987 88888764311 111110 0146788999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc---------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEE
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF---------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~---------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i 183 (303)
+.+ ++..++ ..+|+|||+||.... ...+...+++|+.++.++++++.+. ....++|
T Consensus 67 ~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii 140 (255)
T PRK05717 67 DEA------QVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIV 140 (255)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEE
Confidence 976 343332 258999999997532 1234678899999999999999742 1336899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
++||..+.... .....|..+|...+.+.+.+...+ . ..+.||++.+.................
T Consensus 141 ~~sS~~~~~~~------------~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~ 208 (255)
T PRK05717 141 NLASTRARQSE------------PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHA 208 (255)
T ss_pred EEcchhhcCCC------------CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhh
Confidence 99998543221 123347777777777777654433 2 677898776543221100000000000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
..+ ...+.+.+|+|.++..++...
T Consensus 209 ~~~-----~~~~~~~~~va~~~~~l~~~~ 232 (255)
T PRK05717 209 QHP-----AGRVGTVEDVAAMVAWLLSRQ 232 (255)
T ss_pred cCC-----CCCCcCHHHHHHHHHHHcCch
Confidence 011 123678999999999888644
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.8e-16 Score=133.82 Aligned_cols=200 Identities=13% Similarity=0.118 Sum_probs=132.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|++|+.++++|++.|++ |++++|+.. . ....++.++++|++
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~---v~~~~~~~~-----~-------------------~~~~~~~~~~~D~~ 58 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAK---VIGFDQAFL-----T-------------------QEDYPFATFVLDVS 58 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEecchh-----h-------------------hcCCceEEEEecCC
Confidence 56789999999999999999999999987 888888640 0 01246889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ .+..+++ .+|+|||++|.... ...+...+++|+.++..+++++... .+..+||+
T Consensus 59 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 132 (252)
T PRK08220 59 DAA------AVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVT 132 (252)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 876 4555544 48999999997542 2245678899999999999887542 24568999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHH-----HHHHH
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGM-----LVGIA 253 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~-----~~~~~ 253 (303)
+||..+.. +...+..|..+|...+.+.+.+...+ . ++++||.+.+..-...+ .....
T Consensus 133 ~ss~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~ 200 (252)
T PRK08220 133 VGSNAAHV------------PRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVI 200 (252)
T ss_pred ECCchhcc------------CCCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhh
Confidence 99985432 22234556777777777776665432 2 67788866433211000 00000
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.+.. ...........+++++|+|++++.++...
T Consensus 201 ~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 233 (252)
T PRK08220 201 AGFP-EQFKLGIPLGKIARPQEIANAVLFLASDL 233 (252)
T ss_pred hhHH-HHHhhcCCCcccCCHHHHHHHHHHHhcch
Confidence 0000 00111122345789999999999988754
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1e-15 Score=132.74 Aligned_cols=203 Identities=10% Similarity=0.124 Sum_probs=130.7
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|+++||||+|+||+++++.|++.|++ |++..+... +.++.+... ...++.++.+|+++
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~---vv~~~~~~~-----~~~~~~~~~------------~~~~~~~~~~D~~~ 63 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGAR---VVVNYHQSE-----DAAEALADE------------LGDRAIALQADVTD 63 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCe---EEEEcCCCH-----HHHHHHHHH------------hCCceEEEEcCCCC
Confidence 4589999999999999999999999987 666555322 111111110 01468889999998
Q ss_pred CCCCCCHHHHHHHhc-------c-ccEEEEcceecc---------c----cccHHHHHhhhHHHHHHHHHHHHhc---CC
Q psy17679 123 PGLGLSETDRATLVK-------Q-VNIVFHGAATVR---------F----DEHIKMAVKINVCGVQAMLQLAREM---KD 178 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~-------~-~dvVi~~a~~~~---------~----~~~~~~~~~~N~~~~~~ll~~a~~~---~~ 178 (303)
.+ ++..+++ . +|++||+||... . ...+...+++|+.++..+++++... .+
T Consensus 64 ~~------~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 137 (253)
T PRK08642 64 RE------QVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG 137 (253)
T ss_pred HH------HHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC
Confidence 76 4554443 2 899999998521 0 1234567899999999999888642 24
Q ss_pred CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHH
Q psy17679 179 LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGI 252 (303)
Q Consensus 179 ~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~ 252 (303)
..++|++||..... +..++..|..+|...+.+++.++..+. +.+.||++.+...........
T Consensus 138 ~g~iv~iss~~~~~------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~ 205 (253)
T PRK08642 138 FGRIINIGTNLFQN------------PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEV 205 (253)
T ss_pred CeEEEEECCccccC------------CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHH
Confidence 57899999974321 223445677888888888887755432 677798775432111000000
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........ ....+.+.+|+|++++.++..+.
T Consensus 206 ~~~~~~~~-----~~~~~~~~~~va~~~~~l~~~~~ 236 (253)
T PRK08642 206 FDLIAATT-----PLRKVTTPQEFADAVLFFASPWA 236 (253)
T ss_pred HHHHHhcC-----CcCCCCCHHHHHHHHHHHcCchh
Confidence 00000011 11347899999999999997543
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=133.20 Aligned_cols=205 Identities=15% Similarity=0.165 Sum_probs=133.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+||||||+|+||.++++.|++.|+. |+++.|+.. .+.+.+.... ...++.++.+|++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~---v~~~~~~~~----~~~~~~~~~~------------~~~~~~~~~~D~~ 73 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGAD---IIITTHGTN----WDETRRLIEK------------EGRKVTFVQVDLT 73 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCcH----HHHHHHHHHh------------cCCceEEEEcCCC
Confidence 56799999999999999999999999987 888888621 2222222211 1246889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++..+++ .+|++||++|.... ...++..+++|+.+...+.+++.+. ++..++|+
T Consensus 74 ~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~ 147 (258)
T PRK06935 74 KPE------SAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIIN 147 (258)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 976 4544444 68999999997432 2245678889999988777766542 24579999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHH-HHHHhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGML-VGIATGVL 257 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~-~~~~~~~~ 257 (303)
+||..+... ......|..+|...+.+.+.++..+. +.+.||++.+........ ........
T Consensus 148 isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~ 215 (258)
T PRK06935 148 IASMLSFQG------------GKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEIL 215 (258)
T ss_pred ECCHHhccC------------CCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHH
Confidence 999865422 12234566777778887777655443 678899775443211000 00000000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+ ....+...+|++..+.+++....
T Consensus 216 ~~~-----~~~~~~~~~dva~~~~~l~s~~~ 241 (258)
T PRK06935 216 KRI-----PAGRWGEPDDLMGAAVFLASRAS 241 (258)
T ss_pred hcC-----CCCCCCCHHHHHHHHHHHcChhh
Confidence 011 11236788999999999887543
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.2e-16 Score=132.22 Aligned_cols=199 Identities=12% Similarity=0.083 Sum_probs=130.7
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|+++||||+|++|..+++.|+++|+. |++++|++.. .+.+.+... ....++.++.+|+++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~~~ 66 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWD---LALVARSQDA---LEALAAELR------------STGVKAAAYSIDLSN 66 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hCCCcEEEEEccCCC
Confidence 4578999999999999999999999986 9999997531 111111111 011468889999998
Q ss_pred CCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEE
Q psy17679 123 PGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHV 185 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~i 185 (303)
.+ .+..+++ ++|+|||++|.... ...+...+++|+.++..+++.+.+. .+..++|++
T Consensus 67 ~~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~i 140 (241)
T PRK07454 67 PE------AIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINV 140 (241)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 76 4444433 58999999997432 1234667889999988877776432 145789999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVLHT 259 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~ 259 (303)
||..+... ......|..+|...+.+.+.+... .. ++++||++.+...... ....
T Consensus 141 sS~~~~~~------------~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~--------~~~~ 200 (241)
T PRK07454 141 SSIAARNA------------FPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE--------TVQA 200 (241)
T ss_pred ccHHhCcC------------CCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc--------cccc
Confidence 99965432 122345667777777777655322 22 7888987654331110 0000
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.+ ....++..+|+|++++.++..+..
T Consensus 201 ~~----~~~~~~~~~~va~~~~~l~~~~~~ 226 (241)
T PRK07454 201 DF----DRSAMLSPEQVAQTILHLAQLPPS 226 (241)
T ss_pred cc----ccccCCCHHHHHHHHHHHHcCCcc
Confidence 00 112357999999999999987743
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.9e-15 Score=136.78 Aligned_cols=203 Identities=13% Similarity=0.133 Sum_probs=129.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++++|+||||+|+||.++++.|++.|+. |++++|+.. .++++... +. ....++.++.+|+
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~---Vvl~~R~~~------~l~~~~~~-----l~----~~g~~~~~v~~Dv 66 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAK---VVLLARGEE------GLEALAAE-----IR----AAGGEALAVVADV 66 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-----HH----HcCCcEEEEEecC
Confidence 356789999999999999999999999987 888898643 12211110 00 0124688899999
Q ss_pred CCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++..++ ..+|++|||||.... ...+...+++|+.+...+.+.+.+. .+..+||
T Consensus 67 ~d~~------~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV 140 (334)
T PRK07109 67 ADAE------AVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAII 140 (334)
T ss_pred CCHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9976 454443 368999999997432 1234567888988877665555432 1457899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC------Cc--EEeecceecCccChHHHHHHHHhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN------RV--HISGTGWIDNVYGPIGMLVGIATG 255 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~------~~--~ii~pg~~~~~~g~~~~~~~~~~~ 255 (303)
++||..+... ......|..+|...+.+.+.+... .. +++.||.+.+.+-. .......
T Consensus 141 ~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~--~~~~~~~- 205 (334)
T PRK07109 141 QVGSALAYRS------------IPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD--WARSRLP- 205 (334)
T ss_pred EeCChhhccC------------CCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh--hhhhhcc-
Confidence 9999966532 123345667777666665544321 12 67789876443211 1110000
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. .......++..+|+|++++.++.++.
T Consensus 206 ---~---~~~~~~~~~~pe~vA~~i~~~~~~~~ 232 (334)
T PRK07109 206 ---V---EPQPVPPIYQPEVVADAILYAAEHPR 232 (334)
T ss_pred ---c---cccCCCCCCCHHHHHHHHHHHHhCCC
Confidence 0 01112245789999999999998764
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2e-15 Score=133.94 Aligned_cols=209 Identities=13% Similarity=0.051 Sum_probs=135.2
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
..+++|++|||||+|+||.++++.|++.|++ |+++.|+.... .+.+.+.... ...++.++.+|
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~---V~l~~r~~~~~--~~~~~~~~~~------------~~~~~~~~~~D 104 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGAD---IAIVYLDEHED--ANETKQRVEK------------EGVKCLLIPGD 104 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCcchH--HHHHHHHHHh------------cCCeEEEEEcc
Confidence 4567799999999999999999999999987 88888865321 1122111110 12467889999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEE
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFV 183 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i 183 (303)
+++.+ .+..+++ ++|+|||+||.... ...+...+++|+.++..+++++... ....+||
T Consensus 105 l~~~~------~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV 178 (290)
T PRK06701 105 VSDEA------FCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAII 178 (290)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEE
Confidence 99876 4444443 68999999997422 1234678899999999999998763 1235899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+.... .....|..+|...+.+.+.++..+ . ..++||.+.+..-+.........
T Consensus 179 ~isS~~~~~~~------------~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~--- 243 (290)
T PRK06701 179 NTGSITGYEGN------------ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVS--- 243 (290)
T ss_pred EEecccccCCC------------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHH---
Confidence 99998554321 112346667777777776665443 2 67778866443221111000010
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+........+.+++|+|++++.++.+..
T Consensus 244 --~~~~~~~~~~~~~~~dva~~~~~ll~~~~ 272 (290)
T PRK06701 244 --QFGSNTPMQRPGQPEELAPAYVFLASPDS 272 (290)
T ss_pred --HHHhcCCcCCCcCHHHHHHHHHHHcCccc
Confidence 01111223457899999999999988653
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=132.42 Aligned_cols=207 Identities=14% Similarity=0.086 Sum_probs=131.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHH-HHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++|+++||||+|+||.++++.|++.|+. |++++|++... +.+ +++.. ...++.++.+|+
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~~---v~~~~r~~~~~---~~~~~~~~~-------------~~~~~~~~~~D~ 64 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGAK---VVVGARRQAEL---DQLVAEIRA-------------EGGEAVALAGDV 64 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHHHHHHh-------------cCCcEEEEEcCC
Confidence 45689999999999999999999999987 88899875321 111 11111 014678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~ 182 (303)
++.+ ++.++++ .+|++||+||.... ...+...+++|+.++..+.+.+... ++..+|
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~i 138 (254)
T PRK07478 65 RDEA------YAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSL 138 (254)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceE
Confidence 9876 4444443 68999999997431 1235678899998887776655432 155789
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGV 256 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~ 256 (303)
|++||..+... +...+..|..+|...+.+.+.+...+ . +.+.||++.+...............
T Consensus 139 v~~sS~~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~ 207 (254)
T PRK07478 139 IFTSTFVGHTA-----------GFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAF 207 (254)
T ss_pred EEEechHhhcc-----------CCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHH
Confidence 99999865421 11234567777777777777665443 2 6778997755432110000000000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.... .....+...+|+|+++++++.++.
T Consensus 208 ~~~~----~~~~~~~~~~~va~~~~~l~s~~~ 235 (254)
T PRK07478 208 VAGL----HALKRMAQPEEIAQAALFLASDAA 235 (254)
T ss_pred HHhc----CCCCCCcCHHHHHHHHHHHcCchh
Confidence 0000 011235689999999999887553
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.1e-15 Score=131.49 Aligned_cols=208 Identities=14% Similarity=0.120 Sum_probs=132.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||.++++.|++.|+. |++++|+... .+.+.+... ....++.++.+|++
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~i~------------~~~~~~~~~~~Dl~ 71 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGAR---VVLSARKAEE---LEEAAAHLE------------ALGIDALWIAADVA 71 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCeEEEEEccCC
Confidence 56799999999999999999999999987 8888886421 111111110 01246778999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceEE
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~i 183 (303)
|++ ++..++ ..+|+|||+||.... ...+...+++|+.++..+++++.+. ++..+||
T Consensus 72 d~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v 145 (259)
T PRK08213 72 DEA------DIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRII 145 (259)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 976 443333 368999999996421 2234567889999999999877543 2567999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+.....+ ...+...|..+|...+.+++.+...+ . ++++||++.+..... ..........
T Consensus 146 ~~sS~~~~~~~~~--------~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~-~~~~~~~~~~ 216 (259)
T PRK08213 146 NVASVAGLGGNPP--------EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG-TLERLGEDLL 216 (259)
T ss_pred EECChhhccCCCc--------cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh-hhHHHHHHHH
Confidence 9999854322110 01123457778888888887765433 2 678898775433211 1111111110
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
. .....-+...+|++..++.++...
T Consensus 217 ~-----~~~~~~~~~~~~va~~~~~l~~~~ 241 (259)
T PRK08213 217 A-----HTPLGRLGDDEDLKGAALLLASDA 241 (259)
T ss_pred h-----cCCCCCCcCHHHHHHHHHHHhCcc
Confidence 0 111122456899999988888654
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-15 Score=131.76 Aligned_cols=204 Identities=11% Similarity=0.075 Sum_probs=130.1
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
.|+++||||+|+||+++++.|++.|++ |++++|..... ..+..+.+.. ...++.++.+|+++.
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~---vi~~~r~~~~~-~~~~~~~~~~-------------~~~~~~~~~~D~~~~ 64 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFD---LAINDRPDDEE-LAATQQELRA-------------LGVEVIFFPADVADL 64 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCE---EEEEecCchhH-HHHHHHHHHh-------------cCCceEEEEecCCCH
Confidence 378999999999999999999999987 88888864321 1111111111 124688999999997
Q ss_pred CCCCCHHHHHHHh-------ccccEEEEcceeccc---------cccHHHHHhhhHHHHHHHHHHHHhc----CC-----
Q psy17679 124 GLGLSETDRATLV-------KQVNIVFHGAATVRF---------DEHIKMAVKINVCGVQAMLQLAREM----KD----- 178 (303)
Q Consensus 124 ~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~---------~~~~~~~~~~N~~~~~~ll~~a~~~----~~----- 178 (303)
. ++.+++ ..+|+|||+||.... ...+...+++|+.++.++++.+.+. ..
T Consensus 65 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 138 (256)
T PRK12745 65 S------AHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELP 138 (256)
T ss_pred H------HHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCC
Confidence 6 444433 368999999997431 1345678899999999998887543 11
Q ss_pred CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHH
Q psy17679 179 LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGI 252 (303)
Q Consensus 179 ~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~ 252 (303)
..+||++||..+... ......|..+|...+.+.+.+... .. ++++||.+.+..... .....
T Consensus 139 ~~~iv~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~-~~~~~ 205 (256)
T PRK12745 139 HRSIVFVSSVNAIMV------------SPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP-VTAKY 205 (256)
T ss_pred CcEEEEECChhhccC------------CCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc-cchhH
Confidence 467999999854321 112345667777788877766543 22 778898664432211 10111
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...... + ......|.+..|+++++..++...
T Consensus 206 -~~~~~~--~-~~~~~~~~~~~d~a~~i~~l~~~~ 236 (256)
T PRK12745 206 -DALIAK--G-LVPMPRWGEPEDVARAVAALASGD 236 (256)
T ss_pred -Hhhhhh--c-CCCcCCCcCHHHHHHHHHHHhCCc
Confidence 000000 0 011235779999999999888643
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.8e-16 Score=133.06 Aligned_cols=200 Identities=11% Similarity=0.124 Sum_probs=127.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|+||||+|++|.++++.|++.|++ |++++|++. +++.+... ...++.++.+|+++.+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dl~~~~ 59 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHK---VIATGRRQE------RLQELKDE------------LGDNLYIAQLDVRNRA 59 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH------------hccceEEEEecCCCHH
Confidence 57999999999999999999999987 888999743 22222110 0146888999999876
Q ss_pred CCCCHHHHHHHh-------ccccEEEEcceecc--------ccccHHHHHhhhHHHHHHHHHHHH----hcCCCceEEEE
Q psy17679 125 LGLSETDRATLV-------KQVNIVFHGAATVR--------FDEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFVHV 185 (303)
Q Consensus 125 ~~~~~~~~~~~~-------~~~dvVi~~a~~~~--------~~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i~i 185 (303)
++..++ .++|+|||+||... ....+...+++|+.++..+++.+. +. +..+||++
T Consensus 60 ------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~i 132 (248)
T PRK10538 60 ------AIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINI 132 (248)
T ss_pred ------HHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence 444433 37999999999632 122346778999999777666654 33 66799999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceec-CccChHHHHHHHHhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWID-NVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~-~~~g~~~~~~~~~~~~~~ 258 (303)
||..+.. +......|..+|...+.+.+.+...+ . ++++||.+. +.+....+... . ....
T Consensus 133 sS~~~~~------------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~-~-~~~~ 198 (248)
T PRK10538 133 GSTAGSW------------PYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGD-D-GKAE 198 (248)
T ss_pred CCcccCC------------CCCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCc-H-HHHH
Confidence 9985432 12233456677777777776554332 2 678898763 22211000000 0 0000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcccC
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
..+. ...++..+|+|++++.++..+...
T Consensus 199 ~~~~----~~~~~~~~dvA~~~~~l~~~~~~~ 226 (248)
T PRK10538 199 KTYQ----NTVALTPEDVSEAVWWVATLPAHV 226 (248)
T ss_pred hhcc----ccCCCCHHHHHHHHHHHhcCCCcc
Confidence 0111 123578999999999999866544
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-15 Score=150.58 Aligned_cols=185 Identities=16% Similarity=0.113 Sum_probs=122.7
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
..||||||||+||||++|++.|.+.|++ |.. ..+|++|
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~---v~~---------------------------------------~~~~l~d 416 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIA---YEY---------------------------------------GKGRLED 416 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCe---EEe---------------------------------------ecccccc
Confidence 4579999999999999999999998877 421 1134455
Q ss_pred CCCCCCHHHHHHHhc--cccEEEEcceecc---c---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC-
Q psy17679 123 PGLGLSETDRATLVK--QVNIVFHGAATVR---F---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP- 193 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~--~~dvVi~~a~~~~---~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~- 193 (303)
.. .+...+. ++|+|||+|+... . ..+....+++|+.++.+|+++|++. +++ ++++||.+++..
T Consensus 417 ~~------~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~-~v~~Ss~~v~~~~ 488 (668)
T PLN02260 417 RS------SLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLL-MMNFATGCIFEYD 488 (668)
T ss_pred HH------HHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCe-EEEEcccceecCC
Confidence 43 4555554 7999999999763 2 2355678899999999999999998 774 667777644321
Q ss_pred -------CCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceec--CccChHHHHHHHHhhhhhhccCCC
Q psy17679 194 -------RERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWID--NVYGPIGMLVGIATGVLHTHLINL 264 (303)
Q Consensus 194 -------~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~--~~~g~~~~~~~~~~~~~~~~~~~~ 264 (303)
..+++|++...| +.+.|..+|..+|.++..+... .++++.+.. ..+++..++..+..... .+.-
T Consensus 489 ~~~~~~~~~p~~E~~~~~~--~~~~Yg~sK~~~E~~~~~~~~~--~~~r~~~~~~~~~~~~~nfv~~~~~~~~-~~~v-- 561 (668)
T PLN02260 489 AKHPEGSGIGFKEEDKPNF--TGSFYSKTKAMVEELLREYDNV--CTLRVRMPISSDLSNPRNFITKISRYNK-VVNI-- 561 (668)
T ss_pred cccccccCCCCCcCCCCCC--CCChhhHHHHHHHHHHHhhhhh--eEEEEEEecccCCCCccHHHHHHhccce-eecc--
Confidence 235677653322 3356778889999999887543 234433332 22334455555554432 1111
Q ss_pred CccccceehhHHHHHHHHHHhh
Q psy17679 265 NTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 265 ~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
..+..+++|++.+++.++..
T Consensus 562 --p~~~~~~~~~~~~~~~l~~~ 581 (668)
T PLN02260 562 --PNSMTVLDELLPISIEMAKR 581 (668)
T ss_pred --CCCceehhhHHHHHHHHHHh
Confidence 13467888899888888764
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.4e-15 Score=132.65 Aligned_cols=195 Identities=15% Similarity=0.089 Sum_probs=127.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++||||+|+||.++++.|++.|++ |++++|+.. .++++... +. ....++.++.+|++
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~~---Vi~~~R~~~------~l~~~~~~-----l~----~~~~~~~~~~~Dl~ 99 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGAT---VVAVARRED------LLDAVADR-----IT----RAGGDAMAVPCDLS 99 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-----HH----hcCCcEEEEEccCC
Confidence 56689999999999999999999999987 889999742 22221110 00 00145778999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc---------cccHHHHHhhhHHHHHHHHHHHH----hcCCCce
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF---------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKA 181 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~---------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r 181 (303)
|.+ ++..+++ .+|++|||||.... ...+...+++|+.+...+++.+. .. +..+
T Consensus 100 d~~------~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~ 172 (293)
T PRK05866 100 DLD------AVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-GDGH 172 (293)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcE
Confidence 876 4555544 78999999997532 12335678899999888877664 33 5679
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhh
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATG 255 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~ 255 (303)
||++||..+... +......|..+|...+.+.+.+...+ . +.+.||.+.+.....
T Consensus 173 iv~isS~~~~~~-----------~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~--------- 232 (293)
T PRK05866 173 IINVATWGVLSE-----------ASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP--------- 232 (293)
T ss_pred EEEECChhhcCC-----------CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc---------
Confidence 999999754321 11123457777877777776654332 2 677788654332110
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
. .. . .....+..+++|+.++.++.+.
T Consensus 233 ~-~~-~----~~~~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 233 T-KA-Y----DGLPALTADEAAEWMVTAARTR 258 (293)
T ss_pred c-cc-c----cCCCCCCHHHHHHHHHHHHhcC
Confidence 0 00 0 0112468899999999988764
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.7e-16 Score=132.84 Aligned_cols=207 Identities=13% Similarity=0.136 Sum_probs=129.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+||||+|+||+++++.|++.|+. |++++|+.. .++++... ...++.++++|++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~---v~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~ 62 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGAR---VAITGRDPA------SLEAARAE------------LGESALVIRADAG 62 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEecCCHH------HHHHHHHH------------hCCceEEEEecCC
Confidence 56789999999999999999999999987 888888632 11111110 0146778999999
Q ss_pred CCCCCCCHHHHHHH-------hccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEe
Q psy17679 122 LPGLGLSETDRATL-------VKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVS 186 (303)
Q Consensus 122 d~~~~~~~~~~~~~-------~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iS 186 (303)
+.. ++..+ ..++|+|||+||.... ...+...+++|+.++..+++++.+. ....++|++|
T Consensus 63 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~ 136 (249)
T PRK06500 63 DVA------AQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNG 136 (249)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 865 33322 2368999999997532 1234578899999999999999753 1335788888
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH-HHHHHHhhhhhh
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG-MLVGIATGVLHT 259 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~-~~~~~~~~~~~~ 259 (303)
|..+... ......|..+|...+.+++.+...+ . .+++||.+.+.+.... ............
T Consensus 137 S~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~ 204 (249)
T PRK06500 137 SINAHIG------------MPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQ 204 (249)
T ss_pred chHhccC------------CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHH
Confidence 8743221 1123467778888888887664432 2 6788876543321100 000000000000
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+.. .....-+...+|+|++++.++..+.
T Consensus 205 ~~~-~~~~~~~~~~~~va~~~~~l~~~~~ 232 (249)
T PRK06500 205 IQA-LVPLGRFGTPEEIAKAVLYLASDES 232 (249)
T ss_pred HHh-cCCCCCCcCHHHHHHHHHHHcCccc
Confidence 000 0011124689999999999887543
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-15 Score=130.63 Aligned_cols=211 Identities=12% Similarity=0.106 Sum_probs=128.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||++++++|.+.|+. |.+..+.... ...+...++.. ....+..+.+|++
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~---v~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~~~D~~ 64 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGAL---VAIHYGNRKE-EAEETVYEIQS-------------NGGSAFSIGANLE 64 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCe---EEEEcCCCHH-HHHHHHHHHHh-------------cCCceEEEecccC
Confidence 45789999999999999999999999987 6665433211 11111111111 0135667889999
Q ss_pred CCCCCCCHHHHHHHh---------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEE
Q psy17679 122 LPGLGLSETDRATLV---------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~---------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~ 184 (303)
+.+. . ......+. .++|++|||||.... ...+...+++|+.++..+++++.+. .+..+||+
T Consensus 65 ~~~~-~-~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~ 142 (252)
T PRK12747 65 SLHG-V-EALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIIN 142 (252)
T ss_pred CHHH-H-HHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEE
Confidence 8651 0 00111111 168999999996421 1235678889999999999887664 12359999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+... ......|..+|...+.+.+.++..+ . +.+.||++.+.................
T Consensus 143 isS~~~~~~------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~ 210 (252)
T PRK12747 143 ISSAATRIS------------LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYAT 210 (252)
T ss_pred ECCcccccC------------CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHH
Confidence 999965432 1233457778888887777665443 2 678899775443211000000000000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
. ......+..++|+|+++..++...
T Consensus 211 ~----~~~~~~~~~~~dva~~~~~l~s~~ 235 (252)
T PRK12747 211 T----ISAFNRLGEVEDIADTAAFLASPD 235 (252)
T ss_pred h----cCcccCCCCHHHHHHHHHHHcCcc
Confidence 0 011234678999999999987643
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.4e-15 Score=129.68 Aligned_cols=204 Identities=14% Similarity=0.158 Sum_probs=127.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|++|.++++.|++.|+. |+++.|+.... ...+.+.+. ....++.++.+|++
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~---v~~~~~~~~~~--~~~~~~~~~------------~~~~~~~~~~~Dl~ 65 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGAN---VVINYASSEAG--AEALVAEIG------------ALGGKALAVQGDVS 65 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCchhH--HHHHHHHHH------------hcCCceEEEEcCCC
Confidence 45689999999999999999999999987 77777764311 111111111 01257888999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceecccc-------ccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRFD-------EHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~-------~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ .+..+++ ++|+|||++|..... ..++..+.+|+.++..+++.+... .+.++||+
T Consensus 66 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~ 139 (248)
T PRK05557 66 DAE------SVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIIN 139 (248)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 976 4444443 689999999975421 234567788999999998888653 24578999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+.... .....|..+|...+.+.+.+... .. ++++||++.+..... ...........
T Consensus 140 iss~~~~~~~------------~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~-~~~~~~~~~~~ 206 (248)
T PRK05557 140 ISSVVGLMGN------------PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDA-LPEDVKEAILA 206 (248)
T ss_pred EcccccCcCC------------CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccc-cChHHHHHHHh
Confidence 9998443211 12334566666666666554332 22 788898764322111 00111111100
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
......+++++|+|+++..++..
T Consensus 207 -----~~~~~~~~~~~~va~~~~~l~~~ 229 (248)
T PRK05557 207 -----QIPLGRLGQPEEIASAVAFLASD 229 (248)
T ss_pred -----cCCCCCCcCHHHHHHHHHHHcCc
Confidence 11122367999999999888765
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.5e-15 Score=131.41 Aligned_cols=206 Identities=11% Similarity=0.066 Sum_probs=132.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++||||+|+||.++++.|+++|++ |++++|+... .+.+.+... ....++.++.+|++
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~---Vi~~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~D~~ 69 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGAD---VLIAARTESQ---LDEVAEQIR------------AAGRRAHVVAADLA 69 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCcEEEEEccCC
Confidence 56789999999999999999999999987 8889997431 111111111 01246888999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~i 183 (303)
+.+ ++..+++ ++|+|||+||.... ...+...+++|+.++..+++++... .+..+||
T Consensus 70 ~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv 143 (263)
T PRK07814 70 HPE------ATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVI 143 (263)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEE
Confidence 876 4544433 68999999996322 1335678899999999999998642 2557899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc-----EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV-----HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~-----~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
++||.++.. +......|..+|...+.+.+.+...+. +.+.||.+.+.......-......
T Consensus 144 ~~sS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~--- 208 (263)
T PRK07814 144 NISSTMGRL------------AGRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRA--- 208 (263)
T ss_pred EEccccccC------------CCCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHH---
Confidence 999986542 222344577778778887776654322 677788664332110000000000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.+... .....+...+|+|++++.++...
T Consensus 209 ~~~~~-~~~~~~~~~~~va~~~~~l~~~~ 236 (263)
T PRK07814 209 PMEKA-TPLRRLGDPEDIAAAAVYLASPA 236 (263)
T ss_pred HHHhc-CCCCCCcCHHHHHHHHHHHcCcc
Confidence 11111 01122468899999999988654
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3e-15 Score=129.18 Aligned_cols=203 Identities=12% Similarity=0.122 Sum_probs=131.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
.++++++||||+|+||+++++.|+++|++ |+++.|+.... ..+..+.+.. ...++.++.+|++
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~---v~~~~~~~~~~-~~~~~~~~~~-------------~~~~~~~~~~Dl~ 65 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFA---VAVNYAGSAAA-ADELVAEIEA-------------AGGRAIAVQADVA 65 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEecCCCHHH-HHHHHHHHHh-------------cCCeEEEEECCCC
Confidence 35689999999999999999999999987 66666654211 1111111111 1257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEe
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVS 186 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iS 186 (303)
+.+ ++.++++ ++|+|||+||.... ...++..+++|+.++..+++.+.+. ....+||++|
T Consensus 66 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~s 139 (245)
T PRK12937 66 DAA------AVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLS 139 (245)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEe
Confidence 876 4555544 68999999997532 2234567889999999999888654 1235899999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCcc--Ch--HHHHHHHHhhh
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVY--GP--IGMLVGIATGV 256 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~--g~--~~~~~~~~~~~ 256 (303)
|..+.. +......|..+|...+.+++.+...+ . +++.||++.+.. .+ ......+...
T Consensus 140 s~~~~~------------~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~- 206 (245)
T PRK12937 140 TSVIAL------------PLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGL- 206 (245)
T ss_pred eccccC------------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhc-
Confidence 874432 22234557777888888887664432 2 677898765432 11 1111111111
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....-+.+++|+|++++.++..+.
T Consensus 207 --------~~~~~~~~~~d~a~~~~~l~~~~~ 230 (245)
T PRK12937 207 --------APLERLGTPEEIAAAVAFLAGPDG 230 (245)
T ss_pred --------CCCCCCCCHHHHHHHHHHHcCccc
Confidence 111124578999999999887553
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.6e-15 Score=132.57 Aligned_cols=208 Identities=15% Similarity=0.089 Sum_probs=132.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|++ |++..|+.+... .+.+.++... ...++.++.+|++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~---Vi~~~~~~~~~~-~~~~~~~~~~------------~~~~~~~~~~Dl~ 110 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGAD---VAISYLPVEEED-AQDVKKIIEE------------CGRKAVLLPGDLS 110 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCE---EEEecCCcchhh-HHHHHHHHHH------------cCCeEEEEEccCC
Confidence 66789999999999999999999999997 777766543211 2223222211 1146778999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEE
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHV 185 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~i 185 (303)
+.+ ++..++ .++|++||+||.... ...+...+++|+.++..+++++.+. ....+||++
T Consensus 111 ~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 184 (294)
T PRK07985 111 DEK------FARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITT 184 (294)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEE
Confidence 876 343333 368999999996321 2345678899999999999888763 123589999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH-HHHHHHHhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI-GMLVGIATGVLH 258 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~-~~~~~~~~~~~~ 258 (303)
||..+... ......|..+|...+.+.+.++..+ . ++++||++.+.+... .........
T Consensus 185 SS~~~~~~------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~--- 249 (294)
T PRK07985 185 SSIQAYQP------------SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQ--- 249 (294)
T ss_pred CCchhccC------------CCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHH---
Confidence 99865422 1123457777777777777665432 2 678898775443100 000000000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+........+...+|+|+++++++....
T Consensus 250 --~~~~~~~~r~~~pedva~~~~fL~s~~~ 277 (294)
T PRK07985 250 --FGQQTPMKRAGQPAELAPVYVYLASQES 277 (294)
T ss_pred --HhccCCCCCCCCHHHHHHHHHhhhChhc
Confidence 0000111235678999999999987543
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-15 Score=132.91 Aligned_cols=200 Identities=14% Similarity=0.103 Sum_probs=128.4
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+++++||||+|+||.++++.|++.|++ |++++|++.. ++.+... + ...++.++.+|+.+.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~---v~~~~r~~~~------~~~~~~~-----~------~~~~~~~~~~D~~~~ 61 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDR---VLALDIDAAA------LAAFADA-----L------GDARFVPVACDLTDA 61 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCE---EEEEeCCHHH------HHHHHHH-----h------cCCceEEEEecCCCH
Confidence 468999999999999999999999987 8889987532 1111110 0 014688999999997
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcceecccc-------ccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEe
Q psy17679 124 GLGLSETDRATLVK-------QVNIVFHGAATVRFD-------EHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVS 186 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~-------~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iS 186 (303)
+ ++..+++ ++|+|||++|..... ..+...+.+|+.++..+++++... .+..+||++|
T Consensus 62 ~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~s 135 (257)
T PRK07074 62 A------SLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIG 135 (257)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEc
Confidence 6 4554444 589999999975321 223455678999998888877432 2557899999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHH--HHHHHhhhhh
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGM--LVGIATGVLH 258 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~--~~~~~~~~~~ 258 (303)
|..+.... ....|..+|...+.+.+.++..+. .+++||++.+....... ...+....
T Consensus 136 S~~~~~~~-------------~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-- 200 (257)
T PRK07074 136 SVNGMAAL-------------GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEEL-- 200 (257)
T ss_pred chhhcCCC-------------CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHH--
Confidence 97543211 012356667777777776654432 67778866433211000 00000000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.......+|++++|++++++.++..+
T Consensus 201 ---~~~~~~~~~~~~~d~a~~~~~l~~~~ 226 (257)
T PRK07074 201 ---KKWYPLQDFATPDDVANAVLFLASPA 226 (257)
T ss_pred ---HhcCCCCCCCCHHHHHHHHHHHcCch
Confidence 01122357899999999999999754
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.8e-15 Score=132.78 Aligned_cols=198 Identities=10% Similarity=0.033 Sum_probs=127.0
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|+||||+|+||+++++.|++.|+. |++.+|+... ..+....+.. ...++.++.+|+++.+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~---V~~~~r~~~~--~~~~~~~l~~-------------~~~~~~~~~~D~~~~~ 62 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWR---LALADVNEEG--GEETLKLLRE-------------AGGDGFYQRCDVRDYS 62 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCE---EEEEeCCHHH--HHHHHHHHHh-------------cCCceEEEEccCCCHH
Confidence 57999999999999999999999987 8888886432 1111111111 1246788999999866
Q ss_pred CCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEEEEe
Q psy17679 125 LGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFVHVS 186 (303)
Q Consensus 125 ~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i~iS 186 (303)
++..+++ ++|+|||+||.... ...++..+++|+.++..+.+.+. +. +..+||++|
T Consensus 63 ------~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vs 135 (270)
T PRK05650 63 ------QLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KSGRIVNIA 135 (270)
T ss_pred ------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEEC
Confidence 3444433 68999999997542 12345678899988887766653 44 567999999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChH-----HHHHHHHhh
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPI-----GMLVGIATG 255 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~-----~~~~~~~~~ 255 (303)
|..+... ......|..+|...+.+.+.+... .. ++++||.+.+.+... .........
T Consensus 136 S~~~~~~------------~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 203 (270)
T PRK05650 136 SMAGLMQ------------GPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGK 203 (270)
T ss_pred ChhhcCC------------CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHH
Confidence 9865432 223345666676655555544333 22 788898775443211 000000000
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. ....+++++|+|+.++.++.+..
T Consensus 204 ~---------~~~~~~~~~~vA~~i~~~l~~~~ 227 (270)
T PRK05650 204 L---------LEKSPITAADIADYIYQQVAKGE 227 (270)
T ss_pred H---------hhcCCCCHHHHHHHHHHHHhCCC
Confidence 0 11235789999999999998653
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.3e-15 Score=129.52 Aligned_cols=201 Identities=16% Similarity=0.155 Sum_probs=129.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|.+.|++ |++++|+.... ...++.++.+|+
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~---v~~~~r~~~~~------------------------~~~~~~~~~~D~ 58 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGAR---VVTTARSRPDD------------------------LPEGVEFVAADL 58 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCE---EEEEeCChhhh------------------------cCCceeEEecCC
Confidence 366799999999999999999999999987 88999974311 014678899999
Q ss_pred CCCCCCCCHHHHHHH-------hccccEEEEcceecc---------ccccHHHHHhhhHHHHHHHHHHHHhc---CCCce
Q psy17679 121 SLPGLGLSETDRATL-------VKQVNIVFHGAATVR---------FDEHIKMAVKINVCGVQAMLQLAREM---KDLKA 181 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~-------~~~~dvVi~~a~~~~---------~~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r 181 (303)
++.+ .+..+ +..+|+|||+||... ....+...+++|+.++..+++.+.+. .+..+
T Consensus 59 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ 132 (260)
T PRK06523 59 TTAE------GCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGV 132 (260)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcE
Confidence 9976 33332 246899999999532 12345678889999988776665432 14568
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhh
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATG 255 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~ 255 (303)
||++||..+.... ......|..+|...+.+.+.+...+ . .+++||++.+..... ........
T Consensus 133 ii~isS~~~~~~~-----------~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~-~~~~~~~~ 200 (260)
T PRK06523 133 IIHVTSIQRRLPL-----------PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVA-LAERLAEA 200 (260)
T ss_pred EEEEecccccCCC-----------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHH-HHHHHHhh
Confidence 9999998553211 1123456777777777777665433 2 678899775543221 11110000
Q ss_pred -------hhhhc---cCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 256 -------VLHTH---LINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 256 -------~~~~~---~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
....+ .. +.....+...+|+|+++++++...
T Consensus 201 ~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~va~~~~~l~s~~ 241 (260)
T PRK06523 201 AGTDYEGAKQIIMDSLG-GIPLGRPAEPEEVAELIAFLASDR 241 (260)
T ss_pred cCCCHHHHHHHHHHHhc-cCccCCCCCHHHHHHHHHHHhCcc
Confidence 00000 00 001122567899999999998754
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.2e-15 Score=130.00 Aligned_cols=208 Identities=13% Similarity=0.103 Sum_probs=130.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||++++++|++.|++ |++++|+.+.. ..+..+.+.. ...++.++.+|++
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~---v~~~~r~~~~~-~~~~~~~l~~-------------~~~~~~~~~~D~~ 68 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGAD---VALFDLRTDDG-LAETAEHIEA-------------AGRRAIQIAADVT 68 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCcchH-HHHHHHHHHh-------------cCCceEEEEcCCC
Confidence 56799999999999999999999999987 88888865321 1111111111 0146778999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++.+.+. .+..+||+
T Consensus 69 ~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 142 (254)
T PRK06114 69 SKA------DLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVN 142 (254)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEE
Confidence 876 3444433 57999999997532 2345678889999988777766432 14579999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+.... +......|..+|...+.+.+.++.. .. +++.||++.+.................
T Consensus 143 isS~~~~~~~----------~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~ 212 (254)
T PRK06114 143 IASMSGIIVN----------RGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEE 212 (254)
T ss_pred ECchhhcCCC----------CCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHh
Confidence 9998654321 1111234667777677776665432 22 678899875543211000000000000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.. + ...+..++|+++.+++++...
T Consensus 213 ~~---p--~~r~~~~~dva~~~~~l~s~~ 236 (254)
T PRK06114 213 QT---P--MQRMAKVDEMVGPAVFLLSDA 236 (254)
T ss_pred cC---C--CCCCcCHHHHHHHHHHHcCcc
Confidence 11 1 112567899999999988754
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.5e-15 Score=132.06 Aligned_cols=201 Identities=13% Similarity=0.149 Sum_probs=127.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||.++++.|.+.|+. |+++.|.+. +..+++.. .++.++.+|++
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~~---v~~~~~~~~-----~~~~~l~~---------------~~~~~~~~Dl~ 61 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGAK---VAVLYNSAE-----NEAKELRE---------------KGVFTIKCDVG 61 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCcH-----HHHHHHHh---------------CCCeEEEecCC
Confidence 56789999999999999999999999987 766666432 11111111 25778999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i 183 (303)
+.+ ++..+++ ++|+||||||.... ...+...+++|+.++..+.+.+. +. +..+||
T Consensus 62 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv 134 (255)
T PRK06463 62 NRD------QVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIV 134 (255)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 976 4544443 68999999997432 22356788999999766655443 33 557999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH----HHHHHHH
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI----GMLVGIA 253 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~----~~~~~~~ 253 (303)
++||..+... +......|..+|...+.+.+.+...+ . +.+.||++.+.+... .......
T Consensus 135 ~isS~~~~~~-----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~ 203 (255)
T PRK06463 135 NIASNAGIGT-----------AAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLR 203 (255)
T ss_pred EEcCHHhCCC-----------CCCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHH
Confidence 9999865421 11123456777777777777665432 2 677899775443211 0000000
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. +........+...+|+|++++.++....
T Consensus 204 ~~-----~~~~~~~~~~~~~~~va~~~~~l~s~~~ 233 (255)
T PRK06463 204 EL-----FRNKTVLKTTGKPEDIANIVLFLASDDA 233 (255)
T ss_pred HH-----HHhCCCcCCCcCHHHHHHHHHHHcChhh
Confidence 00 0001112235689999999999987554
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.3e-15 Score=130.83 Aligned_cols=207 Identities=8% Similarity=0.027 Sum_probs=132.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||.+++++|++.|++ |++.+|+.... .+..+++.. ...++.++.+|++
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~---vvl~~r~~~~~--~~~~~~l~~-------------~~~~~~~~~~Dl~ 68 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAE---IIINDITAERA--ELAVAKLRQ-------------EGIKAHAAPFNVT 68 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCE---EEEEcCCHHHH--HHHHHHHHh-------------cCCeEEEEecCCC
Confidence 56789999999999999999999999987 88888864311 111111110 0146778899999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++..+++ .+|+|||++|.... ...+...+++|+.++..+++.+... ++..+||+
T Consensus 69 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 142 (254)
T PRK08085 69 HKQ------EVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIIN 142 (254)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 976 4444433 58999999997432 2345678899999988888777653 24578999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+..-............
T Consensus 143 isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~-- 208 (254)
T PRK08085 143 ICSMQSEL------------GRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAW-- 208 (254)
T ss_pred Eccchhcc------------CCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHH--
Confidence 99985432 11233456677777888887765443 2 7888997754432110000000000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. .......+...+|+++++..++...+
T Consensus 209 -~~-~~~p~~~~~~~~~va~~~~~l~~~~~ 236 (254)
T PRK08085 209 -LC-KRTPAARWGDPQELIGAAVFLSSKAS 236 (254)
T ss_pred -HH-hcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 00 01112346789999999998887543
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-15 Score=132.35 Aligned_cols=198 Identities=11% Similarity=0.034 Sum_probs=127.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
++|+||||+|+||.++++.|+++|++ |++++|+.. +++.+.. .++..+.+|+.+..
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~---v~~~~r~~~------~~~~~~~---------------~~~~~~~~D~~~~~ 58 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYR---VLAACRKPD------DVARMNS---------------LGFTGILLDLDDPE 58 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HhHHHHh---------------CCCeEEEeecCCHH
Confidence 58999999999999999999999986 888888743 1211111 35678899998865
Q ss_pred CCCCHHHHHHHh--------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHH----HHHHHhcCCCceEEEE
Q psy17679 125 LGLSETDRATLV--------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAM----LQLAREMKDLKAFVHV 185 (303)
Q Consensus 125 ~~~~~~~~~~~~--------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~l----l~~a~~~~~~~r~i~i 185 (303)
++..++ ..+|.++|++|.... ...+...+++|+.++.++ ++.+.+. +.+++|++
T Consensus 59 ------~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~~ 131 (256)
T PRK08017 59 ------SVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRIVMT 131 (256)
T ss_pred ------HHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEEEEE
Confidence 333322 357999999996432 123456788999988776 4555555 66799999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhh----CcCCc--EEeecceecCccChHHHHHHHHhhh-hh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEM----TPNRV--HISGTGWIDNVYGPIGMLVGIATGV-LH 258 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~----~~~~~--~ii~pg~~~~~~g~~~~~~~~~~~~-~~ 258 (303)
||.++... ...+..|..+|...|.+.+.+ ..... ++++||.+.+.+. .....+. ..
T Consensus 132 ss~~~~~~------------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~-----~~~~~~~~~~ 194 (256)
T PRK08017 132 SSVMGLIS------------TPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFT-----DNVNQTQSDK 194 (256)
T ss_pred cCcccccC------------CCCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchh-----hcccchhhcc
Confidence 99865432 123445777777788776543 22222 6778886533221 1111111 00
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcccC
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
.....+...+.+++++|+++++..++.++...
T Consensus 195 ~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~ 226 (256)
T PRK08017 195 PVENPGIAARFTLGPEAVVPKLRHALESPKPK 226 (256)
T ss_pred chhhhHHHhhcCCCHHHHHHHHHHHHhCCCCC
Confidence 11111223356799999999999999877644
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.4e-15 Score=128.34 Aligned_cols=206 Identities=10% Similarity=0.086 Sum_probs=126.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|++|+++||||+|+||+++++.|++.|+. |++..+... ....+.++++.. ...++.++.+|++
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~---vv~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~D~~ 63 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFK---VVAGCGPNS-PRRVKWLEDQKA-------------LGFDFIASEGNVG 63 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCE---EEEEcCCCh-HHHHHHHHHHHh-------------cCCcEEEEEcCCC
Confidence 45689999999999999999999999987 655444221 111112222211 0246778899999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++..++ .++|+|||+||.... ...++..+++|+.++..+++.+... .+..+||+
T Consensus 64 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~ 137 (246)
T PRK12938 64 DWD------STKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIIN 137 (246)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 876 344433 368999999997532 2345678889999977766665431 25679999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+... ...+..|..+|...+.+.+.+... .. +.+.||++.+..... .......
T Consensus 138 isS~~~~~~------------~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~-~~~~~~~---- 200 (246)
T PRK12938 138 ISSVNGQKG------------QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLE---- 200 (246)
T ss_pred EechhccCC------------CCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh-cChHHHH----
Confidence 999865422 123445666777666665554432 22 678898775443211 0011110
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.... ......+...+|++++++.++..+.
T Consensus 201 ~~~~-~~~~~~~~~~~~v~~~~~~l~~~~~ 229 (246)
T PRK12938 201 KIVA-TIPVRRLGSPDEIGSIVAWLASEES 229 (246)
T ss_pred HHHh-cCCccCCcCHHHHHHHHHHHcCccc
Confidence 0000 1112335688999999998887653
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.9e-15 Score=134.29 Aligned_cols=203 Identities=14% Similarity=0.147 Sum_probs=129.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++|+||||+|+||+++++.|++.|+. |++++|+.. .++++... +. ....++.++.+|++
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~---Vvl~~R~~~------~l~~~~~~-----~~----~~g~~~~~~~~Dv~ 66 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGAR---LVLAARDEE------ALQAVAEE-----CR----ALGAEVLVVPTDVT 66 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-----HH----hcCCcEEEEEeeCC
Confidence 56789999999999999999999999987 888898643 22221110 00 01246778899999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
|.+ ++..++ ..+|++|||||.... ...+...+++|+.++.++.+++.+. .+..+||+
T Consensus 67 d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~ 140 (330)
T PRK06139 67 DAD------QVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFIN 140 (330)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 976 455544 368999999997432 1234568899999998887776532 14568999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHH----HhhCcC-Cc--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEEL----SEMTPN-RV--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~----~~~~~~-~~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
+||..+... ......|..+|.....+. .++... .. +.+.||.+.+...... ... .+.
T Consensus 141 isS~~~~~~------------~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~--~~~-~~~- 204 (330)
T PRK06139 141 MISLGGFAA------------QPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHG--ANY-TGR- 204 (330)
T ss_pred EcChhhcCC------------CCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccc--ccc-ccc-
Confidence 999865422 122345667776544444 444332 22 6777887654431110 000 000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.......++..+|+|++++.++.++..
T Consensus 205 -----~~~~~~~~~~pe~vA~~il~~~~~~~~ 231 (330)
T PRK06139 205 -----RLTPPPPVYDPRRVAKAVVRLADRPRA 231 (330)
T ss_pred -----cccCCCCCCCHHHHHHHHHHHHhCCCC
Confidence 001122357899999999999987654
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.3e-15 Score=129.92 Aligned_cols=205 Identities=11% Similarity=0.047 Sum_probs=132.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+||||+|+||.++++.|.+.|+. |++++|.... .+.+.+.... ...++.++.+|++
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~---vv~~~r~~~~---~~~~~~~l~~------------~~~~~~~~~~D~~ 70 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGAS---VVVSDINADA---ANHVVDEIQQ------------LGGQAFACRCDIT 70 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCCHHH---HHHHHHHHHh------------cCCcEEEEEccCC
Confidence 56899999999999999999999999987 7788886432 1111111110 1146778899999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEE
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHV 185 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~i 185 (303)
+.+ ++..++ ..+|++||+||.... ...+...+++|+.++..+++++... .+..+||++
T Consensus 71 ~~~------~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i 144 (255)
T PRK06113 71 SEQ------ELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTI 144 (255)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEE
Confidence 876 344333 368999999997432 1334567899999999999988642 144699999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHhhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIATGVLHT 259 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~~~~~~ 259 (303)
||..+.. +......|..+|...+.+.+.+...+. +++.||++.+..................
T Consensus 145 sS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~ 212 (255)
T PRK06113 145 TSMAAEN------------KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQH 212 (255)
T ss_pred ecccccC------------CCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhc
Confidence 9986532 222344577788888888877654332 6777987754321110000000000000
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.....+...+|++++++.++...
T Consensus 213 -----~~~~~~~~~~d~a~~~~~l~~~~ 235 (255)
T PRK06113 213 -----TPIRRLGQPQDIANAALFLCSPA 235 (255)
T ss_pred -----CCCCCCcCHHHHHHHHHHHcCcc
Confidence 11123578899999999998644
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.7e-15 Score=131.89 Aligned_cols=209 Identities=10% Similarity=0.047 Sum_probs=128.5
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+++|+||||+|+||.++++.|++.|+. |++++|+.... .+..+.+... ....++.++.+|+++.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~---vi~~~r~~~~~--~~~~~~~~~~-----------~~~~~~~~~~~D~~~~ 65 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYR---VAVADINSEKA--ANVAQEINAE-----------YGEGMAYGFGADATSE 65 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEECCHHHH--HHHHHHHHHh-----------cCCceeEEEEccCCCH
Confidence 578999999999999999999999987 88888864311 1111111110 0013588999999986
Q ss_pred CCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC-CceEEEE
Q psy17679 124 GLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD-LKAFVHV 185 (303)
Q Consensus 124 ~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~-~~r~i~i 185 (303)
+ ++..++ ..+|+|||+||.... ...+...+++|+.++..+++.+.+. ++ ..+||++
T Consensus 66 ~------~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ 139 (259)
T PRK12384 66 Q------SVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQI 139 (259)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEe
Confidence 6 344333 368999999997532 2235677889999988777776542 13 4689999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCc----CCc--EEeeccee-cCccChHHHHHHHHh----
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTP----NRV--HISGTGWI-DNVYGPIGMLVGIAT---- 254 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~----~~~--~ii~pg~~-~~~~g~~~~~~~~~~---- 254 (303)
||..+... ......|..+|...+.+.+.+.. ... .+++||.+ .+.+.. ..+.....
T Consensus 140 ss~~~~~~------------~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~-~~~~~~~~~~~~ 206 (259)
T PRK12384 140 NSKSGKVG------------SKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ-SLLPQYAKKLGI 206 (259)
T ss_pred cCcccccC------------CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh-hhhHHHHHhcCC
Confidence 99743221 11223466667766666665543 222 67888753 222111 11111110
Q ss_pred --hhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 255 --GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 255 --~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+.....+..+.....+++++|++++++.++.+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~ 241 (259)
T PRK12384 207 KPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK 241 (259)
T ss_pred ChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcc
Confidence 111111222333456899999999999988754
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.8e-15 Score=130.35 Aligned_cols=210 Identities=15% Similarity=0.102 Sum_probs=128.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|+. |++++|+.... .+..+++.. ....++.++.+|++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~------------~~~~~~~~~~~Dv~ 68 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGAD---VILLSRNEENL--KKAREKIKS------------ESNVDVSYIVADLT 68 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHh------------hcCCceEEEEecCC
Confidence 57789999999999999999999999987 88888864321 111111111 00146889999999
Q ss_pred CCCCCCCHHHHHHHhc------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEE
Q psy17679 122 LPGLGLSETDRATLVK------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHV 185 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~i 185 (303)
|.+ ++..+++ .+|++|||||.... ...+...+++|+.+...+.+.+.+. ++..++|++
T Consensus 69 ~~~------~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~i 142 (263)
T PRK08339 69 KRE------DLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYS 142 (263)
T ss_pred CHH------HHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 976 4444443 68999999996432 2345678889988877666555432 255799999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHH------
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIA------ 253 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~------ 253 (303)
||..+.. +...+..|..+|...+.+.+.++..+ . +.+.||.+.+.+... ......
T Consensus 143 sS~~~~~------------~~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~~~~~~~~~~~ 209 (263)
T PRK08339 143 TSVAIKE------------PIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQ-LAQDRAKREGKS 209 (263)
T ss_pred cCccccC------------CCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHH-HHHhhhhccCCC
Confidence 9996542 12223445556666666666554333 2 677798775433111 000000
Q ss_pred -hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 -TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 -~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........ .......+...+|+|++++.++....
T Consensus 210 ~~~~~~~~~-~~~p~~r~~~p~dva~~v~fL~s~~~ 244 (263)
T PRK08339 210 VEEALQEYA-KPIPLGRLGEPEEIGYLVAFLASDLG 244 (263)
T ss_pred HHHHHHHHh-ccCCcccCcCHHHHHHHHHHHhcchh
Confidence 00000000 01111235778999999999887543
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.7e-15 Score=130.86 Aligned_cols=198 Identities=14% Similarity=0.049 Sum_probs=127.8
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+++||||+|+||+++++.|+++|+. |++++|+... ++++... + . ..++.++.+|+++.
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~---V~~~~r~~~~------~~~~~~~-----~-----~-~~~~~~~~~D~~~~ 60 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWR---VGAYDINEAG------LAALAAE-----L-----G-AGNAWTGALDVTDR 60 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeCCHHH------HHHHHHH-----h-----c-CCceEEEEecCCCH
Confidence 468999999999999999999999987 8888887432 2221110 0 0 14788999999987
Q ss_pred CCCCCHHHHHHHhc--------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEE
Q psy17679 124 GLGLSETDRATLVK--------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHV 185 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~i 185 (303)
. ++.++++ ++|+||||||.... ...++..+++|+.++..+++++.+. .+..+||++
T Consensus 61 ~------~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i 134 (260)
T PRK08267 61 A------AWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINT 134 (260)
T ss_pred H------HHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEe
Confidence 6 4444433 57999999997542 1235678899999999998887542 246799999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVLHT 259 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~ 259 (303)
||..+... ......|..+|...+.+.+.+... .. +++.||++.+....... .........
T Consensus 135 sS~~~~~~------------~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~~~~- 200 (260)
T PRK08267 135 SSASAIYG------------QPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTS-NEVDAGSTK- 200 (260)
T ss_pred CchhhCcC------------CCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccccc-chhhhhhHh-
Confidence 99855321 112345667777777777665432 22 67789876543321100 000000000
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...-.+..+|+|++++.++..+
T Consensus 201 ------~~~~~~~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 201 ------RLGVRLTPEDVAEAVWAAVQHP 222 (260)
T ss_pred ------hccCCCCHHHHHHHHHHHHhCC
Confidence 0111356699999999998654
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.2e-15 Score=134.69 Aligned_cols=180 Identities=12% Similarity=0.040 Sum_probs=116.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+|+||||+|+||++++++|++.|++ |++++|+.... .+..+++... ....++.++.+|+
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~---vi~~~r~~~~~--~~~~~~l~~~-----------~~~~~~~~~~~Dl 76 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAH---VVLAVRNLDKG--KAAAARITAA-----------TPGADVTLQELDL 76 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHHh-----------CCCCceEEEECCC
Confidence 357799999999999999999999999987 88889864321 1111121110 0014678999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-----cccHHHHHhhhHHHH----HHHHHHHHhcCCCceEEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-----DEHIKMAVKINVCGV----QAMLQLAREMKDLKAFVH 184 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-----~~~~~~~~~~N~~~~----~~ll~~a~~~~~~~r~i~ 184 (303)
+|.+ ++..+++ ++|+||||||.... ...++..+++|+.+. ..+++.+++. +..+||+
T Consensus 77 ~d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~ 149 (306)
T PRK06197 77 TSLA------SVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVT 149 (306)
T ss_pred CCHH------HHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEE
Confidence 9976 4444433 68999999997432 234567789999994 4455555554 5579999
Q ss_pred EeCCcccC-CCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--E--EeecceecCcc
Q psy17679 185 VSTAFTHC-PRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--H--ISGTGWIDNVY 243 (303)
Q Consensus 185 iSS~~~~~-~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~--ii~pg~~~~~~ 243 (303)
+||..+.. ......+.....+..+...|..+|...+.+.+.+...+ . . .+.||++.+..
T Consensus 150 vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~ 217 (306)
T PRK06197 150 VSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL 217 (306)
T ss_pred ECCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence 99984322 11112222222334456778888888888777665433 1 2 23599775443
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.7e-15 Score=130.49 Aligned_cols=205 Identities=9% Similarity=0.081 Sum_probs=132.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|+. |++++|++... .+..+++.. ...++.++.+|++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~---v~~~~r~~~~~--~~~~~~~~~-------------~~~~~~~~~~Dl~ 70 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAH---VLVNGRNAATL--EAAVAALRA-------------AGGAAEALAFDIA 70 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCe---EEEEeCCHHHH--HHHHHHHHh-------------cCCceEEEEccCC
Confidence 57899999999999999999999999987 88999974211 111111111 1246889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHh----cCCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLARE----MKDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~----~~~~~r~i 183 (303)
+.+ ++..+++ ++|+|||++|.... ...++..+.+|+.++..+++.+.+ . +..+||
T Consensus 71 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv 143 (256)
T PRK06124 71 DEE------AVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ-GYGRII 143 (256)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 876 4444443 57999999997432 123456788999999888876654 3 567999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHH-HHHHHhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGM-LVGIATGV 256 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~-~~~~~~~~ 256 (303)
++||..+... ......|..+|...+.+.+.+...+ . +.+.||.+.+....... ........
T Consensus 144 ~~ss~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~ 211 (256)
T PRK06124 144 AITSIAGQVA------------RAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWL 211 (256)
T ss_pred EEeechhccC------------CCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHH
Confidence 9999865422 1123456666666666666554332 2 67778876544311100 00000000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. ......+++++|++.+++.++..+.
T Consensus 212 -~~----~~~~~~~~~~~~~a~~~~~l~~~~~ 238 (256)
T PRK06124 212 -AQ----RTPLGRWGRPEEIAGAAVFLASPAA 238 (256)
T ss_pred -Hh----cCCCCCCCCHHHHHHHHHHHcCccc
Confidence 00 1112347899999999999998664
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.1e-15 Score=130.24 Aligned_cols=210 Identities=12% Similarity=0.101 Sum_probs=129.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC-cccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK-GKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~-~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++|+++||||+|+||.++++.|++.|+. |+++.+... .....+.+.+.+.. ...++.++.+|+
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~---vv~i~~~~~~~~~~~~~~~~~l~~------------~~~~~~~~~~D~ 70 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAK---AVAIHYNSAASKADAEETVAAVKA------------AGAKAVAFQADL 70 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCc---EEEEecCCccchHHHHHHHHHHHH------------hCCcEEEEecCc
Confidence 46689999999999999999999999987 666665432 11112222111110 014688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHV 185 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~i 185 (303)
++.+ ++.++++ ++|++||+||.... ...++..+++|+.++..+++.+.+. ....+++++
T Consensus 71 ~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~ 144 (257)
T PRK12744 71 TTAA------AVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTL 144 (257)
T ss_pred CCHH------HHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEE
Confidence 9876 4444433 68999999997421 1235678899999999999888754 123567776
Q ss_pred eCC-cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCcc-ChHHHHHHHHhhhh
Q psy17679 186 STA-FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVY-GPIGMLVGIATGVL 257 (303)
Q Consensus 186 SS~-~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~-g~~~~~~~~~~~~~ 257 (303)
+|+ .+.. ......|..+|...+.+.+.+...+ . +.++||.+.+.. .+............
T Consensus 145 ~ss~~~~~-------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~ 211 (257)
T PRK12744 145 VTSLLGAF-------------TPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKT 211 (257)
T ss_pred ecchhccc-------------CCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccc
Confidence 444 2221 1123457778888888888775443 2 678898775432 11100000000000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
.....+-....+.+++|+|.++..++..
T Consensus 212 -~~~~~~~~~~~~~~~~dva~~~~~l~~~ 239 (257)
T PRK12744 212 -AAALSPFSKTGLTDIEDIVPFIRFLVTD 239 (257)
T ss_pred -cccccccccCCCCCHHHHHHHHHHhhcc
Confidence 0001111122578999999999999884
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.1e-15 Score=131.73 Aligned_cols=203 Identities=13% Similarity=0.108 Sum_probs=130.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|+. |++++|+... ++++... ...++.++.+|++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~------~~~~~~~------------~~~~~~~~~~Dl~ 62 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGAR---VAIVDIDADN------GAAVAAS------------LGERARFIATDIT 62 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHH------HHHHHHH------------hCCeeEEEEecCC
Confidence 56789999999999999999999999987 8889987431 1111110 0146889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEEe
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVHVS 186 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~iS 186 (303)
+.+ ++.++++ .+|++|||||.... ...+...+++|+.++..+++.+... ++..+||++|
T Consensus 63 ~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~is 136 (261)
T PRK08265 63 DDA------AIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFT 136 (261)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 976 4544443 68999999996421 2345678889999998888877542 2446899999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh---
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL--- 257 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~--- 257 (303)
|..+... ......|..+|...+.+.+.+...+ . +.+.||++.+..... ...+..
T Consensus 137 S~~~~~~------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~-----~~~~~~~~~ 199 (261)
T PRK08265 137 SISAKFA------------QTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDE-----LSGGDRAKA 199 (261)
T ss_pred chhhccC------------CCCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhh-----hcccchhHH
Confidence 9855321 1123356677777777776654332 2 678898764433111 000000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
............+...+|+|+++++++....
T Consensus 200 ~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~ 230 (261)
T PRK08265 200 DRVAAPFHLLGRVGDPEEVAQVVAFLCSDAA 230 (261)
T ss_pred HHhhcccCCCCCccCHHHHHHHHHHHcCccc
Confidence 0000000011224678999999999987543
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.1e-15 Score=129.97 Aligned_cols=204 Identities=12% Similarity=0.082 Sum_probs=131.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+++||++++++|+++|+. |+++.|++. +.+.+... ....++.++.+|++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~---vv~~~~~~~-----~~~~~~~~------------~~~~~~~~~~~Dl~ 65 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGAD---IVGVGVAEA-----PETQAQVE------------ALGRKFHFITADLI 65 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEecCchH-----HHHHHHHH------------HcCCeEEEEEeCCC
Confidence 56799999999999999999999999998 777777532 11111111 01246889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC-CceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD-LKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~-~~r~i 183 (303)
+.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+.+.+.+. ++ ..+||
T Consensus 66 ~~~------~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii 139 (251)
T PRK12481 66 QQK------DIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKII 139 (251)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEE
Confidence 977 4554443 68999999997432 2346678899999988888776542 12 36899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHH-HHHHHhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGM-LVGIATGV 256 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~-~~~~~~~~ 256 (303)
++||..+.... .....|..+|...+.+.+.++..+ . +.+.||.+.+....... ........
T Consensus 140 ~isS~~~~~~~------------~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~ 207 (251)
T PRK12481 140 NIASMLSFQGG------------IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAI 207 (251)
T ss_pred EeCChhhcCCC------------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHH
Confidence 99998654321 122346677777777777655432 2 67789977544321100 00000000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...++ ...+...+|+|+++++++....
T Consensus 208 ~~~~p-----~~~~~~peeva~~~~~L~s~~~ 234 (251)
T PRK12481 208 LERIP-----ASRWGTPDDLAGPAIFLSSSAS 234 (251)
T ss_pred HhcCC-----CCCCcCHHHHHHHHHHHhCccc
Confidence 11111 1135788999999999987543
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-15 Score=131.12 Aligned_cols=197 Identities=11% Similarity=0.079 Sum_probs=130.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|++ |++++|+... . ....++.++++|++
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~~---v~~~~r~~~~-----~------------------~~~~~~~~~~~D~~ 57 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGAT---VVVCGRRAPE-----T------------------VDGRPAEFHAADVR 57 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCChhh-----h------------------hcCCceEEEEccCC
Confidence 56799999999999999999999999987 8888987532 0 00146789999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~i 183 (303)
+.+ ++..+++ ++|+||||||.... ...+...+++|+.++..+++.+... .+..+||
T Consensus 58 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii 131 (252)
T PRK07856 58 DPD------QVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIV 131 (252)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 876 4554443 57999999996432 2235678899999999999887652 1346899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc-----EEeecceecCccChHHHH-HHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV-----HISGTGWIDNVYGPIGML-VGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~-----~ii~pg~~~~~~g~~~~~-~~~~~~~~ 257 (303)
++||..+.. +......|..+|...+.+.+.+...+. ..+.||.+.+........ ......
T Consensus 132 ~isS~~~~~------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~-- 197 (252)
T PRK07856 132 NIGSVSGRR------------PSPGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAA-- 197 (252)
T ss_pred EEcccccCC------------CCCCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHH--
Confidence 999986542 222345577778878888876654432 566788664332111000 000000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+. .......+...+|+|++++.++...
T Consensus 198 --~~-~~~~~~~~~~p~~va~~~~~L~~~~ 224 (252)
T PRK07856 198 --VA-ATVPLGRLATPADIAWACLFLASDL 224 (252)
T ss_pred --Hh-hcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 00 0011123567899999999988654
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.6e-15 Score=129.84 Aligned_cols=209 Identities=11% Similarity=0.069 Sum_probs=128.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|+++|+. |++++|+ .. ..+..+++.. ...++.++.+|++
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~---vi~~~r~-~~--~~~~~~~~~~-------------~~~~~~~~~~Dl~ 64 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAY---VLAVDIA-EA--VSETVDKIKS-------------NGGKAKAYHVDIS 64 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCc-HH--HHHHHHHHHh-------------cCCeEEEEEeecC
Confidence 56789999999999999999999999987 8888886 21 1111222211 0146889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~ 184 (303)
+.+ ++..+++ .+|++|||||.... ...+...+++|+.++..+++.+.+. ....+||+
T Consensus 65 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~ 138 (272)
T PRK08589 65 DEQ------QVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIIN 138 (272)
T ss_pred CHH------HHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEE
Confidence 876 3443333 58999999997531 1234667888999987777766543 12268999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH--HHHHhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML--VGIATGV 256 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~--~~~~~~~ 256 (303)
+||..+... ......|..+|...+.+.+.++..+ . +.+.||.+.+.......- .......
T Consensus 139 isS~~~~~~------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~ 206 (272)
T PRK08589 139 TSSFSGQAA------------DLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKT 206 (272)
T ss_pred eCchhhcCC------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHH
Confidence 999854321 1123456777777777777665433 2 677798764432111000 0000000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.............+...+|+|++++.++...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 237 (272)
T PRK08589 207 FRENQKWMTPLGRLGKPEEVAKLVVFLASDD 237 (272)
T ss_pred HhhhhhccCCCCCCcCHHHHHHHHHHHcCch
Confidence 0000000001112568999999999988754
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3e-15 Score=129.96 Aligned_cols=206 Identities=15% Similarity=0.113 Sum_probs=131.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||.+++++|++.|++ |++++|+.+... +..+++.. ...++.++.+|++
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~~---v~~~~r~~~~~~--~~~~~~~~-------------~~~~~~~~~~D~~ 66 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGAK---VVVADRDAAGGE--ETVALIRE-------------AGGEALFVACDVT 66 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCE---EEEEeCCHHHHH--HHHHHHHh-------------cCCceEEEEcCCC
Confidence 56799999999999999999999999987 888999754211 11111111 1246889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+.. ++..+++ .+|++||++|.... ...+...+++|+.++..+++.+... .+..++|
T Consensus 67 ~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii 140 (253)
T PRK06172 67 RDA------EVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIV 140 (253)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 876 4444443 57999999997421 1234567889999987776654321 1557899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHH--HHHHHhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGM--LVGIATG 255 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~--~~~~~~~ 255 (303)
++||..+... ...+..|..+|...+.+.+.+...+ . ..+.||++.+....... .......
T Consensus 141 ~~sS~~~~~~------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~ 208 (253)
T PRK06172 141 NTASVAGLGA------------APKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEF 208 (253)
T ss_pred EECchhhccC------------CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHH
Confidence 9999855432 2234567777887777777665443 2 67779876443321100 0000000
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
... ......+...+|+++.+++++....
T Consensus 209 ----~~~-~~~~~~~~~p~~ia~~~~~l~~~~~ 236 (253)
T PRK06172 209 ----AAA-MHPVGRIGKVEEVASAVLYLCSDGA 236 (253)
T ss_pred ----Hhc-cCCCCCccCHHHHHHHHHHHhCccc
Confidence 000 0111235688999999999987653
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.2e-15 Score=127.63 Aligned_cols=200 Identities=13% Similarity=0.165 Sum_probs=128.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+||||+|+||+++++.|++.|++ |+++.|... +.++++... .++.++.+|++
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~---v~~~~~~~~-----~~~~~l~~~--------------~~~~~~~~D~~ 61 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGAN---VRFTYAGSK-----DAAERLAQE--------------TGATAVQTDSA 61 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEecCCCH-----HHHHHHHHH--------------hCCeEEecCCC
Confidence 56789999999999999999999999987 766665422 122222111 24567889998
Q ss_pred CCCCCCCHHHHHHHhc---cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeCCcc
Q psy17679 122 LPGLGLSETDRATLVK---QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVSTAFT 190 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~---~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS~~~ 190 (303)
+.+ ++..+++ .+|++||+||.... ...++..+++|+.++..++..+.+. ....++|++||..+
T Consensus 62 ~~~------~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 135 (237)
T PRK12742 62 DRD------AVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG 135 (237)
T ss_pred CHH------HHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 865 4444443 58999999997432 1245678899999998887666543 23469999999865
Q ss_pred cCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH-HHHHHHhhhhhhccCC
Q psy17679 191 HCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG-MLVGIATGVLHTHLIN 263 (303)
Q Consensus 191 ~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~-~~~~~~~~~~~~~~~~ 263 (303)
.. .|......|..+|...+.+.+.++..+ . +++.||.+.+...+.. ........ ..
T Consensus 136 ~~-----------~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~----~~-- 198 (237)
T PRK12742 136 DR-----------MPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDMMHS----FM-- 198 (237)
T ss_pred cc-----------CCCCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHHHHh----cC--
Confidence 21 122234456677777888777664433 2 7888997755442211 01111110 00
Q ss_pred CCccccceehhHHHHHHHHHHhhcc
Q psy17679 264 LNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 264 ~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....+...+|+++++.+++....
T Consensus 199 --~~~~~~~p~~~a~~~~~l~s~~~ 221 (237)
T PRK12742 199 --AIKRHGRPEEVAGMVAWLAGPEA 221 (237)
T ss_pred --CCCCCCCHHHHHHHHHHHcCccc
Confidence 01135688999999999887543
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.3e-15 Score=127.68 Aligned_cols=205 Identities=9% Similarity=0.067 Sum_probs=133.2
Q ss_pred ccccCCcEEEEeCCc--chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEE
Q psy17679 39 QEFYRDKTIFLTGGT--GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAV 116 (303)
Q Consensus 39 ~~~~~~~~vlItGat--G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~ 116 (303)
...+++|+++||||+ +.||++++++|++.|+. |++..|+.. ..+.++++. ..++.++
T Consensus 2 ~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~---Vi~~~r~~~---~~~~~~~~~---------------~~~~~~~ 60 (252)
T PRK06079 2 SGILSGKKIVVMGVANKRSIAWGCAQAIKDQGAT---VIYTYQNDR---MKKSLQKLV---------------DEEDLLV 60 (252)
T ss_pred ccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCE---EEEecCchH---HHHHHHhhc---------------cCceeEE
Confidence 344678999999999 79999999999999987 888888621 112222211 1357789
Q ss_pred EecCCCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc-C
Q psy17679 117 AGDCSLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM-K 177 (303)
Q Consensus 117 ~~Dl~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~-~ 177 (303)
++|+++.+ ++..++ .++|++|||||.... ...+...+++|+.+...+.+.+.+. .
T Consensus 61 ~~Dl~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~ 134 (252)
T PRK06079 61 ECDVASDE------SIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLN 134 (252)
T ss_pred eCCCCCHH------HHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcc
Confidence 99999876 344332 368999999997421 1235678889999998888887654 1
Q ss_pred CCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH-HHH
Q psy17679 178 DLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG-MLV 250 (303)
Q Consensus 178 ~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~-~~~ 250 (303)
+..++|++||..+.. +...+..|..+|...+.+.+.+...+ . +.+.||.+.+..-... ...
T Consensus 135 ~~g~Iv~iss~~~~~------------~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~ 202 (252)
T PRK06079 135 PGASIVTLTYFGSER------------AIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHK 202 (252)
T ss_pred cCceEEEEeccCccc------------cCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChH
Confidence 236899999885432 22245667788888888887665443 2 6788997754321100 000
Q ss_pred HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 251 GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
..........+ ...+...+|+|+++.+++...
T Consensus 203 ~~~~~~~~~~p-----~~r~~~pedva~~~~~l~s~~ 234 (252)
T PRK06079 203 DLLKESDSRTV-----DGVGVTIEEVGNTAAFLLSDL 234 (252)
T ss_pred HHHHHHHhcCc-----ccCCCCHHHHHHHHHHHhCcc
Confidence 00010000111 123678899999999998754
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.2e-15 Score=127.37 Aligned_cols=203 Identities=9% Similarity=0.018 Sum_probs=129.0
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|++|||||+|+||+++++.|++.|+. |+++.|..... .+.+.+... ....++.++.+|++|
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~---v~~~~~~~~~~--~~~~~~~~~------------~~~~~~~~~~~Dl~d 70 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFD---VAVHYNRSRDE--AEALAAEIR------------ALGRRAVALQADLAD 70 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCCHHH--HHHHHHHHH------------hcCCeEEEEEcCCCC
Confidence 4679999999999999999999999987 76666643211 111111110 002468889999999
Q ss_pred CCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEE
Q psy17679 123 PGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHV 185 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~i 185 (303)
.+ ++..+++ .+|+||||||.... ...+...+++|+.++..+++.+... +...++|++
T Consensus 71 ~~------~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ 144 (258)
T PRK09134 71 EA------EVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNM 144 (258)
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 76 4444443 58999999997432 2245678899999999998887654 134578888
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecceecCccCh-HHHHHHHHhhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGWIDNVYGP-IGMLVGIATGVLHT 259 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~~~~~~g~-~~~~~~~~~~~~~~ 259 (303)
+|..+.. +...+..|..+|...+.+.+.+...+ . +.++||++...... ...+.......
T Consensus 145 ~s~~~~~------------~~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~--- 209 (258)
T PRK09134 145 IDQRVWN------------LNPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFARQHAAT--- 209 (258)
T ss_pred CchhhcC------------CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHHHHhcC---
Confidence 8763321 11223457788877887777765432 2 67889876432211 11111111111
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.. ....+++|+|++++.++.++..
T Consensus 210 ~~------~~~~~~~d~a~~~~~~~~~~~~ 233 (258)
T PRK09134 210 PL------GRGSTPEEIAAAVRYLLDAPSV 233 (258)
T ss_pred CC------CCCcCHHHHHHHHHHHhcCCCc
Confidence 11 1246799999999999986543
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.1e-15 Score=129.30 Aligned_cols=206 Identities=12% Similarity=0.114 Sum_probs=133.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccH-HHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDI-QERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~-~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++|+++||||+|+||.++++.|+++|++ |++++|+...... ...++++.. .+. ....++.++.+|+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~~~~~~~l~~~~~-----~~~----~~~~~~~~~~~D~ 71 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGAN---IVIAAKTAEPHPKLPGTIHTAAE-----EIE----AAGGQALPLVGDV 71 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEecccccccchhhHHHHHHH-----HHH----hcCCceEEEEecC
Confidence 46689999999999999999999999987 8888987543211 111211111 000 0124688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
++.+ ++.++++ ++|+|||+||.... ...++..+++|+.++..+++++... ++..++|
T Consensus 72 ~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv 145 (273)
T PRK08278 72 RDED------QVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHIL 145 (273)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEE
Confidence 9977 4554443 68999999997432 1234667889999999999988653 2345899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecce-ecCccChHHHHHHHHhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGW-IDNVYGPIGMLVGIATGV 256 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~-~~~~~g~~~~~~~~~~~~ 256 (303)
++||..+... .....+..|..+|...+.+.+.+...+. ..+.||. +.+.. ..... +.
T Consensus 146 ~iss~~~~~~----------~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~-----~~~~~-~~ 209 (273)
T PRK08278 146 TLSPPLNLDP----------KWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAA-----VRNLL-GG 209 (273)
T ss_pred EECCchhccc----------cccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHH-----HHhcc-cc
Confidence 9988743211 0013455677888888998887765543 5666862 22211 11110 10
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+...+|+|++++.++..+.
T Consensus 210 -------~~~~~~~~~p~~va~~~~~l~~~~~ 234 (273)
T PRK08278 210 -------DEAMRRSRTPEIMADAAYEILSRPA 234 (273)
T ss_pred -------cccccccCCHHHHHHHHHHHhcCcc
Confidence 1111236788999999999888654
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.3e-15 Score=128.16 Aligned_cols=205 Identities=17% Similarity=0.188 Sum_probs=128.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEE-eCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLL-VRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~-~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++++++||||+|++|.++++.|++.|++ |+++ .|+.... +.+.+.+. ....++.++.+|+
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~---v~~~~~r~~~~~---~~~~~~~~------------~~~~~~~~~~~D~ 64 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAK---VVIAYDINEEAA---QELLEEIK------------EEGGDAIAVKADV 64 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEcCCCHHHH---HHHHHHHH------------hcCCeEEEEECCC
Confidence 45689999999999999999999999987 7777 7764311 11111110 0124688999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
++++ .+..+++ ++|+|||++|.... ...++..+.+|+.+..++++.+... .+.++||
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v 138 (247)
T PRK05565 65 SSEE------DVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIV 138 (247)
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9976 4444443 78999999997532 1234677889999988888777643 2457899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+.... .....|..+|...+.+++.+... .. +.++||++.+....... ...... .
T Consensus 139 ~~sS~~~~~~~------------~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~-~~~~~~-~ 204 (247)
T PRK05565 139 NISSIWGLIGA------------SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS-EEDKEG-L 204 (247)
T ss_pred EECCHhhccCC------------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC-hHHHHH-H
Confidence 99998543221 12234555665555555544332 22 67889877543322111 000000 0
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. ......+...+|++++++.++....
T Consensus 205 ~~----~~~~~~~~~~~~va~~~~~l~~~~~ 231 (247)
T PRK05565 205 AE----EIPLGRLGKPEEIAKVVLFLASDDA 231 (247)
T ss_pred Hh----cCCCCCCCCHHHHHHHHHHHcCCcc
Confidence 00 1112335788999999999987653
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.3e-15 Score=127.70 Aligned_cols=193 Identities=15% Similarity=0.099 Sum_probs=126.2
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+++||||+|+||.++++.|+++|+. |++++|+.+.. .+..+++.. ....++.++++|+++.
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~---Vi~~~r~~~~~--~~~~~~~~~------------~~~~~~~~~~~Dl~~~ 63 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGAR---LYLAARDVERL--ERLADDLRA------------RGAVAVSTHELDILDT 63 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCE---EEEEeCCHHHH--HHHHHHHHH------------hcCCeEEEEecCCCCh
Confidence 468999999999999999999999987 89999975321 111111111 0124788999999997
Q ss_pred CCCCCHHHHHHHhc----cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCCc
Q psy17679 124 GLGLSETDRATLVK----QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTAF 189 (303)
Q Consensus 124 ~~~~~~~~~~~~~~----~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~~ 189 (303)
. ++.++++ .+|+|||++|.... ...+...+++|+.++.++++++... .+..+||++||.+
T Consensus 64 ~------~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~ 137 (243)
T PRK07102 64 A------SHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVA 137 (243)
T ss_pred H------HHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEeccc
Confidence 6 4555444 57999999996432 1123457889999999998887652 2567999999986
Q ss_pred ccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhhhhccCC
Q psy17679 190 THCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVLHTHLIN 263 (303)
Q Consensus 190 ~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (303)
+.... .....|..+|...+.+.+.+... .. ..+.||.+.+.+. .+. ..
T Consensus 138 ~~~~~------------~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~---------~~~--~~--- 191 (243)
T PRK07102 138 GDRGR------------ASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMT---------AGL--KL--- 191 (243)
T ss_pred ccCCC------------CCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhh---------hcc--CC---
Confidence 54321 12234566676666666655322 22 6777875533211 000 00
Q ss_pred CCccccceehhHHHHHHHHHHhhc
Q psy17679 264 LNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 264 ~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+ ..-++..+++|+.++.++..+
T Consensus 192 ~--~~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 192 P--GPLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred C--ccccCCHHHHHHHHHHHHhCC
Confidence 0 112467899999999988865
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.3e-15 Score=129.82 Aligned_cols=205 Identities=14% Similarity=0.084 Sum_probs=131.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||.++++.|++.|++ |+++.|+... .+.+.+.+. ....++.++.+|++
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~l~------------~~~~~~~~~~~D~~ 68 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQ---VAIAARHLDA---LEKLADEIG------------TSGGKVVPVCCDVS 68 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCHHH---HHHHHHHHH------------hcCCeEEEEEccCC
Confidence 56789999999999999999999999987 8888886431 112111111 01146778999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC-CceEE
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD-LKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~-~~r~i 183 (303)
+.+ ++..++ .++|++|||||.... ...+...+++|+.++..+++++... ++ ..++|
T Consensus 69 ~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv 142 (253)
T PRK05867 69 QHQ------QVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVII 142 (253)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEE
Confidence 876 344433 378999999997532 2235667889999999888887543 12 35799
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+..... | .....|..+|...+.+.+.++..+ . +.+.||++.+...... ........
T Consensus 143 ~~sS~~~~~~~~---------~-~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~--~~~~~~~~ 210 (253)
T PRK05867 143 NTASMSGHIINV---------P-QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY--TEYQPLWE 210 (253)
T ss_pred EECcHHhcCCCC---------C-CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc--hHHHHHHH
Confidence 999986532110 1 122456777877888777665443 2 6778998755432110 00000000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...+ ...+...+|+|+++++++...
T Consensus 211 ~~~~-----~~r~~~p~~va~~~~~L~s~~ 235 (253)
T PRK05867 211 PKIP-----LGRLGRPEELAGLYLYLASEA 235 (253)
T ss_pred hcCC-----CCCCcCHHHHHHHHHHHcCcc
Confidence 0111 123578999999999998754
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.6e-15 Score=129.67 Aligned_cols=208 Identities=13% Similarity=0.128 Sum_probs=131.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|+. |++++|+... ..+..+++.. ...++.++.+|++
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~---V~~~~r~~~~--~~~~~~~~~~-------------~~~~~~~~~~Dl~ 69 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGAK---VAILDRNQEK--AEAVVAEIKA-------------AGGEALAVKADVL 69 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHH--HHHHHHHHHh-------------cCCeEEEEECCCC
Confidence 56799999999999999999999999987 8888886431 1111111111 1146788999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc----------------------cccHHHHHhhhHHHHHHHHHH
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF----------------------DEHIKMAVKINVCGVQAMLQL 172 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~----------------------~~~~~~~~~~N~~~~~~ll~~ 172 (303)
+.+ ++..++ .++|++||+||.... ...+...+++|+.++..+++.
T Consensus 70 ~~~------~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 143 (278)
T PRK08277 70 DKE------SLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQV 143 (278)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHH
Confidence 876 344433 378999999995321 123567888999988766655
Q ss_pred HHhc---CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCcc
Q psy17679 173 AREM---KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVY 243 (303)
Q Consensus 173 a~~~---~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~ 243 (303)
+.+. .+..+||++||..+.. +......|..+|...+.+.+.++..+. ..+.||++.+..
T Consensus 144 ~~~~~~~~~~g~ii~isS~~~~~------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~ 211 (278)
T PRK08277 144 FAKDMVGRKGGNIINISSMNAFT------------PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ 211 (278)
T ss_pred HHHHHHhcCCcEEEEEccchhcC------------CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence 5432 1457899999996543 222344577777777887776654432 677898776553
Q ss_pred ChHHHHHHH--HhhhhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 244 GPIGMLVGI--ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 244 g~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
........- .......+.. ......+...+|+|+++++++..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~~~dva~~~~~l~s~ 255 (278)
T PRK08277 212 NRALLFNEDGSLTERANKILA-HTPMGRFGKPEELLGTLLWLADE 255 (278)
T ss_pred hhhhhccccccchhHHHHHhc-cCCccCCCCHHHHHHHHHHHcCc
Confidence 221110000 0000001111 11122366889999999998876
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=8e-15 Score=127.64 Aligned_cols=204 Identities=9% Similarity=0.035 Sum_probs=129.4
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+++|+||||+|+||+++++.|++.|+. |+++.|.+... .+.+.+... ....++.++.+|+++.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~---V~~~~~~~~~~--~~~~~~~~~------------~~~~~~~~~~~Dl~~~ 64 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFD---IGITWHSDEEG--AKETAEEVR------------SHGVRAEIRQLDLSDL 64 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCChHH--HHHHHHHHH------------hcCCceEEEEccCCCH
Confidence 578999999999999999999999997 77766543211 111111111 0124788999999997
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceEEEE
Q psy17679 124 GLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAFVHV 185 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~i~i 185 (303)
+ ++..+++ .+|+|||++|.... ...+...+++|+.++..+++++... +...+||++
T Consensus 65 ~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~i 138 (256)
T PRK12743 65 P------EGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINI 138 (256)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 6 4444333 68999999997542 1234678899999999999887653 123589999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLHT 259 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~ 259 (303)
||..+.. +......|..+|...+.+.+.++..+ . +.++||.+.+...... ...........
T Consensus 139 sS~~~~~------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~ 205 (256)
T PRK12743 139 TSVHEHT------------PLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD-DSDVKPDSRPG 205 (256)
T ss_pred eeccccC------------CCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc-ChHHHHHHHhc
Confidence 9985432 23344567777777777776655433 2 6788987654431110 00000000011
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+ ...+.+.+|++.+++.++....
T Consensus 206 ~~-----~~~~~~~~dva~~~~~l~~~~~ 229 (256)
T PRK12743 206 IP-----LGRPGDTHEIASLVAWLCSEGA 229 (256)
T ss_pred CC-----CCCCCCHHHHHHHHHHHhCccc
Confidence 11 1124588999999998886543
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.7e-15 Score=129.83 Aligned_cols=191 Identities=16% Similarity=0.121 Sum_probs=125.6
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+|+||||+|+||.++++.|++.|+. |++++|+.. .++++... +. .. .++.++.+|+++.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~---v~~~~r~~~------~~~~~~~~-----~~----~~-~~~~~~~~Dl~~~ 62 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGAT---LGLVARRTD------ALQAFAAR-----LP----KA-ARVSVYAADVRDA 62 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHh-----cc----cC-CeeEEEEcCCCCH
Confidence 478999999999999999999999987 888888642 22222110 00 11 2688999999997
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHH----HhcCCCceEEE
Q psy17679 124 GLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLA----REMKDLKAFVH 184 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a----~~~~~~~r~i~ 184 (303)
+ ++.++++ .+|++||+||.... ...+...+++|+.++..+++.+ .+. +..+||+
T Consensus 63 ~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv~ 135 (257)
T PRK07024 63 D------ALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLVG 135 (257)
T ss_pred H------HHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEEE
Confidence 6 4544443 47999999997431 1235678889999998877744 333 5679999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhC----cCCc--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMT----PNRV--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~----~~~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+... ......|..+|...+.+.+.+. .... ++++||.+.+.... ..
T Consensus 136 isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~---------~~-- 192 (257)
T PRK07024 136 IASVAGVRG------------LPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTA---------HN-- 192 (257)
T ss_pred EechhhcCC------------CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhh---------cC--
Confidence 999865421 1123457777887888776653 2222 77889866433210 00
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+. ...++..+++|+.++.++.+..
T Consensus 193 -~~~----~~~~~~~~~~a~~~~~~l~~~~ 217 (257)
T PRK07024 193 -PYP----MPFLMDADRFAARAARAIARGR 217 (257)
T ss_pred -CCC----CCCccCHHHHHHHHHHHHhCCC
Confidence 000 0113578888888888887554
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.3e-15 Score=127.77 Aligned_cols=202 Identities=10% Similarity=0.007 Sum_probs=124.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++++|+||||+|+||.++++.|++.|++ |++++|+... ++++... ....++.+|+
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~---v~~~~r~~~~------~~~~~~~--------------~~~~~~~~D~ 60 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGAT---VVVGDIDPEA------GKAAADE--------------VGGLFVPTDV 60 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCCE---EEEEeCCHHH------HHHHHHH--------------cCCcEEEeeC
Confidence 367899999999999999999999999987 8888886431 1111110 1225789999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceecccc---------ccHHHHHhhhHHHHHHHHHHHHh----cCCCc
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRFD---------EHIKMAVKINVCGVQAMLQLARE----MKDLK 180 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~---------~~~~~~~~~N~~~~~~ll~~a~~----~~~~~ 180 (303)
++.+ ++..+++ ++|+|||+||..... ..+...+++|+.++..+++.+.. . +..
T Consensus 61 ~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g 133 (255)
T PRK06057 61 TDED------AVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-GKG 133 (255)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-CCc
Confidence 9976 4555444 579999999975321 22567888999998877776643 3 456
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHH----hhCcCCc--EEeecceecCccChHHHH--HHH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELS----EMTPNRV--HISGTGWIDNVYGPIGML--VGI 252 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~----~~~~~~~--~ii~pg~~~~~~g~~~~~--~~~ 252 (303)
++|++||..+.... ......|..+|...+.+.+ .+..... ++++||++.+......+. ...
T Consensus 134 ~iv~~sS~~~~~g~-----------~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~ 202 (255)
T PRK06057 134 SIINTASFVAVMGS-----------ATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPER 202 (255)
T ss_pred EEEEEcchhhccCC-----------CCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHH
Confidence 89999997442211 0112345666644444444 3333333 788898775433211100 000
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.......++ ...+..++|+++++..++....
T Consensus 203 ~~~~~~~~~-----~~~~~~~~~~a~~~~~l~~~~~ 233 (255)
T PRK06057 203 AARRLVHVP-----MGRFAEPEEIAAAVAFLASDDA 233 (255)
T ss_pred HHHHHhcCC-----CCCCcCHHHHHHHHHHHhCccc
Confidence 000011111 1247899999999998887543
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5e-15 Score=128.48 Aligned_cols=206 Identities=14% Similarity=0.148 Sum_probs=132.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++|+||||+|+||.++++.|++.|+. |++++|+... .+.+.+.+. ....++.++++|++
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~~---Vi~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~~ 67 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAH---VIVSSRKLDG---CQAVADAIV------------AAGGKAEALACHIG 67 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCeEEEEEcCCC
Confidence 56789999999999999999999999986 8888886431 111111111 01145778999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+.+ ++..+++ .+|++||+||.... ...++..+++|+.+...+++++.+. .+..++|
T Consensus 68 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 141 (252)
T PRK07035 68 EME------QIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIV 141 (252)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEE
Confidence 876 3443333 58999999996321 1234568889999988887666432 1567999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHH-HHHHhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGML-VGIATGV 256 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~-~~~~~~~ 256 (303)
++||.++.. |......|..+|...+.+.+.+...+. +.+.||.+.+.+...... .......
T Consensus 142 ~~sS~~~~~------------~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~ 209 (252)
T PRK07035 142 NVASVNGVS------------PGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQA 209 (252)
T ss_pred EECchhhcC------------CCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHH
Confidence 999986542 223445677888888888887765432 677798775433211000 0000000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.... ....+...+|+|++++.++....
T Consensus 210 ~~~~-----~~~~~~~~~~va~~~~~l~~~~~ 236 (252)
T PRK07035 210 LAHI-----PLRRHAEPSEMAGAVLYLASDAS 236 (252)
T ss_pred HccC-----CCCCcCCHHHHHHHHHHHhCccc
Confidence 0000 11235678999999999887653
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.3e-15 Score=126.94 Aligned_cols=199 Identities=10% Similarity=0.049 Sum_probs=129.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|++ |+++.|+.... ...++.++.+|+.
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~---v~~~~r~~~~~------------------------~~~~~~~~~~D~~ 55 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQ---VYGVDKQDKPD------------------------LSGNFHFLQLDLS 55 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCE---EEEEeCCcccc------------------------cCCcEEEEECChH
Confidence 56689999999999999999999999987 88888864311 0146788999998
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCCcc
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTAFT 190 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~~~ 190 (303)
+. ..++.+....+|++||+||.... ...+...+++|+.++.++++++... .+..+||++||.++
T Consensus 56 ~~-----~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 130 (235)
T PRK06550 56 DD-----LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIAS 130 (235)
T ss_pred HH-----HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh
Confidence 75 12444555689999999996421 2235678899999999998887642 14568999999965
Q ss_pred cCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhhhccCCC
Q psy17679 191 HCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLHTHLINL 264 (303)
Q Consensus 191 ~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~ 264 (303)
.... .....|..+|...+.+.+.++..+ . +++.||++.+.+....+.......... ..
T Consensus 131 ~~~~------------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~----~~ 194 (235)
T PRK06550 131 FVAG------------GGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVA----RE 194 (235)
T ss_pred ccCC------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHh----cc
Confidence 4321 122345566666666665544332 2 678898775544221110000000000 01
Q ss_pred CccccceehhHHHHHHHHHHhhcc
Q psy17679 265 NTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 265 ~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....+...+|+|++++.++....
T Consensus 195 ~~~~~~~~~~~~a~~~~~l~s~~~ 218 (235)
T PRK06550 195 TPIKRWAEPEEVAELTLFLASGKA 218 (235)
T ss_pred CCcCCCCCHHHHHHHHHHHcChhh
Confidence 112336788999999999986543
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.8e-15 Score=125.89 Aligned_cols=188 Identities=11% Similarity=0.077 Sum_probs=128.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+++++||||+|+||.+++++|+++|++ |++++|++. +++++... ..++.++.+|+++.
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~---V~~~~r~~~------~~~~~~~~-------------~~~~~~~~~D~~~~ 58 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQ---VIACGRNQS------VLDELHTQ-------------SANIFTLAFDVTDH 58 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCE---EEEEECCHH------HHHHHHHh-------------cCCCeEEEeeCCCH
Confidence 368999999999999999999999987 889999642 22222111 14678899999997
Q ss_pred CCCCCHHHHHHHhc----cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeCCccc
Q psy17679 124 GLGLSETDRATLVK----QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVSTAFTH 191 (303)
Q Consensus 124 ~~~~~~~~~~~~~~----~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS~~~~ 191 (303)
+ ++..+++ .+|++||+||.... ...+...+++|+.++.++++++... .+..++|++||..+.
T Consensus 59 ~------~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~ 132 (240)
T PRK06101 59 P------GTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASE 132 (240)
T ss_pred H------HHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhc
Confidence 6 5666665 36899999986432 1234578899999999999998863 133589999998543
Q ss_pred CCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCc----CCc--EEeecceecCccChHHHHHHHHhhhhhhccCCCC
Q psy17679 192 CPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTP----NRV--HISGTGWIDNVYGPIGMLVGIATGVLHTHLINLN 265 (303)
Q Consensus 192 ~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~----~~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 265 (303)
. +......|..+|...+.+.+.+.. ... +.++||++.+.+... . . ..
T Consensus 133 ~------------~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~---------~--~-~~--- 185 (240)
T PRK06101 133 L------------ALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDK---------N--T-FA--- 185 (240)
T ss_pred c------------CCCCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCC---------C--C-CC---
Confidence 2 112334577778878888776542 222 678898764433211 0 0 00
Q ss_pred ccccceehhHHHHHHHHHHhhc
Q psy17679 266 TVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 266 ~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
....+..+|+|+.++..+...
T Consensus 186 -~~~~~~~~~~a~~i~~~i~~~ 206 (240)
T PRK06101 186 -MPMIITVEQASQEIRAQLARG 206 (240)
T ss_pred -CCcccCHHHHHHHHHHHHhcC
Confidence 011368888899988888764
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.4e-15 Score=127.02 Aligned_cols=199 Identities=12% Similarity=0.066 Sum_probs=127.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+++||||+|++|+++++.|+++|+. |++++|+.. . ...++.... .....++.++.+|+.+.
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~---vi~~~r~~~-~----~~~~~~~~~---------~~~~~~~~~~~~D~~~~ 64 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYR---VIATYFSGN-D----CAKDWFEEY---------GFTEDQVRLKELDVTDT 64 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCE---EEEEeCCcH-H----HHHHHHHHh---------hccCCeEEEEEcCCCCH
Confidence 368999999999999999999999886 889988753 1 111111100 01124688999999997
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHH----HhcCCCceEEEE
Q psy17679 124 GLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLA----REMKDLKAFVHV 185 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a----~~~~~~~r~i~i 185 (303)
+ .+..+++ .+|++||++|.... ...+...+++|+.++.++.+.+ ... +..+||++
T Consensus 65 ~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~i 137 (245)
T PRK12824 65 E------ECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINI 137 (245)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEE
Confidence 6 4444433 58999999997532 2334677889999988875554 444 56799999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH---HHHHHHHhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI---GMLVGIATGV 256 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~---~~~~~~~~~~ 256 (303)
||..+... ......|..+|...+.+.+.+...+ . ++++||++.+..... .....+..
T Consensus 138 ss~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~-- 203 (245)
T PRK12824 138 SSVNGLKG------------QFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVN-- 203 (245)
T ss_pred CChhhccC------------CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHh--
Confidence 99855422 1123457777777777766654322 2 677898775433211 11111111
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
......+....|+++++..++...
T Consensus 204 -------~~~~~~~~~~~~va~~~~~l~~~~ 227 (245)
T PRK12824 204 -------QIPMKRLGTPEEIAAAVAFLVSEA 227 (245)
T ss_pred -------cCCCCCCCCHHHHHHHHHHHcCcc
Confidence 111223567899999999888654
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.8e-15 Score=125.37 Aligned_cols=196 Identities=13% Similarity=0.103 Sum_probs=128.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++|+||||+|++|.++++.|++.|++ |++++|++.. ...+.+.+. . ..++.++.+|+.
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~---V~~~~r~~~~---~~~~~~~l~------------~-~~~~~~~~~D~~ 64 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYK---VAITARDQKE---LEEAAAELN------------N-KGNVLGLAADVR 64 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCE---EEEeeCCHHH---HHHHHHHHh------------c-cCcEEEEEccCC
Confidence 45689999999999999999999999887 8899987431 111111111 0 046888999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVHV 185 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~i 185 (303)
+.. ++..+++ .+|+|||+++.... ...+...+++|+.+...+++++... .+..++|++
T Consensus 65 ~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ 138 (237)
T PRK07326 65 DEA------DVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINI 138 (237)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEE
Confidence 876 4444443 78999999987532 1234567888999999888887643 145689999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhC----cCCc--EEeecceecCccChHHHHHHHHhhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMT----PNRV--HISGTGWIDNVYGPIGMLVGIATGVLHT 259 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~----~~~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~ 259 (303)
||..+... ......|..+|...+.+.+.+. .... ++++||++.+.+....
T Consensus 139 ss~~~~~~------------~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~------------ 194 (237)
T PRK07326 139 SSLAGTNF------------FAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT------------ 194 (237)
T ss_pred CChhhccC------------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc------------
Confidence 99855321 1223446666766666666542 2222 7788887644332110
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
. ......++..+|+++.++.++..+..
T Consensus 195 -~--~~~~~~~~~~~d~a~~~~~~l~~~~~ 221 (237)
T PRK07326 195 -P--SEKDAWKIQPEDIAQLVLDLLKMPPR 221 (237)
T ss_pred -c--chhhhccCCHHHHHHHHHHHHhCCcc
Confidence 0 00001137899999999999987753
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.5e-14 Score=124.36 Aligned_cols=199 Identities=17% Similarity=0.192 Sum_probs=130.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCC-CccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCP-HLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~-~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++++|+||||+|++|+++++.|++.|+ . |++++|+..... + ...++.++.+|+
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~---V~~~~r~~~~~~------~----------------~~~~~~~~~~D~ 58 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAK---VYAAARDPESVT------D----------------LGPRVVPLQLDV 58 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCccc---EEEEecChhhhh------h----------------cCCceEEEEecC
Confidence 4568999999999999999999999998 5 889998754211 0 125788999999
Q ss_pred CCCCCCCCHHHHHHHhc---cccEEEEcceecc-c-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEe
Q psy17679 121 SLPGLGLSETDRATLVK---QVNIVFHGAATVR-F-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVS 186 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~---~~dvVi~~a~~~~-~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iS 186 (303)
.+.+ .+..+++ .+|+|||++|... . ...+...+++|+.+...+++++.+. .+..+||++|
T Consensus 59 ~~~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~s 132 (238)
T PRK08264 59 TDPA------SVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVL 132 (238)
T ss_pred CCHH------HHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEc
Confidence 9976 5555555 5899999999722 1 2334567889999999998887642 2567899999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCcc-----ChHHHHHHHHhh
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVY-----GPIGMLVGIATG 255 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~-----g~~~~~~~~~~~ 255 (303)
|..+.. +...+..|..+|...+.+.+.+...+ . ++++||.+.+.. ++......+...
T Consensus 133 S~~~~~------------~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~~~~~~~a~~ 200 (238)
T PRK08264 133 SVLSWV------------NFPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDAPKASPADVARQ 200 (238)
T ss_pred Chhhcc------------CCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCcCCCCHHHHHHH
Confidence 986542 22234557777777777776654332 2 677887653322 110000001111
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.... . ......++.+|+++.+..++...
T Consensus 201 ~~~~-~---~~~~~~i~~~~~~~~~~~~~~~~ 228 (238)
T PRK08264 201 ILDA-L---EAGDEEVLPDEMARQVKAALSAD 228 (238)
T ss_pred HHHH-H---hCCCCeEeccHHHHHHHHHhhcC
Confidence 1101 1 11235678888888888887754
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.7e-15 Score=130.61 Aligned_cols=208 Identities=12% Similarity=0.054 Sum_probs=134.4
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++++++||||+|+||.++++.|.+.|+. |++++|+.. .++++... +. ....+..+.+|+
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~l~~~~~~-----l~-----~~~~~~~~~~Dv 66 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHARGAK---LALVDLEEA------ELAALAAE-----LG-----GDDRVLTVVADV 66 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-----hc-----CCCcEEEEEecC
Confidence 367799999999999999999999999987 888888643 22222111 00 013566677999
Q ss_pred CCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEE
Q psy17679 121 SLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVH 184 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~ 184 (303)
+|.+ ++..++ ..+|+||||||.... ...+...+++|+.++.++++.+... ....+||+
T Consensus 67 ~d~~------~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~ 140 (296)
T PRK05872 67 TDLA------AMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQ 140 (296)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEE
Confidence 9876 444443 368999999997532 2235678899999999999888653 12358999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHH-HHHhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLV-GIATGVL 257 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~-~~~~~~~ 257 (303)
+||..+... ...+..|..+|...+.+.+.+...+ . +++.||++.+......... .......
T Consensus 141 isS~~~~~~------------~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~ 208 (296)
T PRK05872 141 VSSLAAFAA------------APGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELR 208 (296)
T ss_pred EeCHhhcCC------------CCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHH
Confidence 999865432 2234567788888888887665332 2 6777987754432211000 0000000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+. .....++..+|+|++++.++....
T Consensus 209 ~~~~---~p~~~~~~~~~va~~i~~~~~~~~ 236 (296)
T PRK05872 209 ARLP---WPLRRTTSVEKCAAAFVDGIERRA 236 (296)
T ss_pred hhCC---CcccCCCCHHHHHHHHHHHHhcCC
Confidence 0000 111235789999999999987654
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-14 Score=126.53 Aligned_cols=199 Identities=13% Similarity=0.071 Sum_probs=123.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcC-CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSC-PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g-~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
-.+++|+||||+|+||.+++++|++.| +. |++++|+++.. ..+..+++... ...++.++.+|+
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~---V~~~~r~~~~~-~~~~~~~l~~~------------~~~~v~~~~~D~ 69 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPAR---VVLAALPDDPR-RDAAVAQMKAA------------GASSVEVIDFDA 69 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCe---EEEEeCCcchh-HHHHHHHHHhc------------CCCceEEEEecC
Confidence 346799999999999999999999995 66 88999986521 11112222110 113688999999
Q ss_pred CCCCCCCCHHHHHHHh--ccccEEEEcceecccc----ccH---HHHHhhhHHHHHHH----HHHHHhcCCCceEEEEeC
Q psy17679 121 SLPGLGLSETDRATLV--KQVNIVFHGAATVRFD----EHI---KMAVKINVCGVQAM----LQLAREMKDLKAFVHVST 187 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~--~~~dvVi~~a~~~~~~----~~~---~~~~~~N~~~~~~l----l~~a~~~~~~~r~i~iSS 187 (303)
+|.+. -...+..+. .++|++||++|..... .+. ...+++|+.++..+ ++.+.+. +..+||++||
T Consensus 70 ~~~~~--~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~iv~isS 146 (253)
T PRK07904 70 LDTDS--HPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQIIAMSS 146 (253)
T ss_pred CChHH--HHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceEEEEec
Confidence 98761 000122222 3799999999975321 111 24688999988764 4555555 6789999999
Q ss_pred CcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhC----cCCc--EEeecceecCccChHHHHHHHHhhhhhhcc
Q psy17679 188 AFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMT----PNRV--HISGTGWIDNVYGPIGMLVGIATGVLHTHL 261 (303)
Q Consensus 188 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~----~~~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~ 261 (303)
..+.... .....|..+|.....+.+.+. .... ++++||++.+.... ..
T Consensus 147 ~~g~~~~------------~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~---------~~----- 200 (253)
T PRK07904 147 VAGERVR------------RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA---------HA----- 200 (253)
T ss_pred hhhcCCC------------CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc---------cC-----
Confidence 9653211 112235566665555544432 2222 78889876543210 00
Q ss_pred CCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 262 INLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 262 ~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
... ...+..+|+|+.++.++.++.
T Consensus 201 ~~~---~~~~~~~~~A~~i~~~~~~~~ 224 (253)
T PRK07904 201 KEA---PLTVDKEDVAKLAVTAVAKGK 224 (253)
T ss_pred CCC---CCCCCHHHHHHHHHHHHHcCC
Confidence 000 124688999999999998654
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-14 Score=125.96 Aligned_cols=204 Identities=11% Similarity=0.066 Sum_probs=131.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||.++++.|.+.|+. |++++|... .+..+++.. ...++.++.+|++
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~---vv~~~~~~~----~~~~~~~~~-------------~~~~~~~~~~Dl~ 67 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCD---IVGINIVEP----TETIEQVTA-------------LGRRFLSLTADLR 67 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEecCcch----HHHHHHHHh-------------cCCeEEEEECCCC
Confidence 66799999999999999999999999997 767666432 111122211 0146788999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC-CceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD-LKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~-~~r~i 183 (303)
+.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++... ++ ..++|
T Consensus 68 ~~~------~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv 141 (253)
T PRK08993 68 KID------GIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKII 141 (253)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 876 4444443 68999999997532 2346788999999999888877543 12 35899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH-HHHHhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML-VGIATGV 256 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~-~~~~~~~ 256 (303)
++||..+.... .....|..+|...+.+.+.++..+ . +.+.||++.+........ .......
T Consensus 142 ~isS~~~~~~~------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~ 209 (253)
T PRK08993 142 NIASMLSFQGG------------IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEI 209 (253)
T ss_pred EECchhhccCC------------CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHH
Confidence 99998554321 122356667777777777665443 2 677899876544221000 0000000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...++ ..-+...+|+|+.++.++.+..
T Consensus 210 ~~~~p-----~~r~~~p~eva~~~~~l~s~~~ 236 (253)
T PRK08993 210 LDRIP-----AGRWGLPSDLMGPVVFLASSAS 236 (253)
T ss_pred HhcCC-----CCCCcCHHHHHHHHHHHhCccc
Confidence 01111 1236788999999999987653
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=7e-15 Score=129.29 Aligned_cols=202 Identities=10% Similarity=0.100 Sum_probs=126.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+++||||+|++|+++++.|++.|+. |++++|+.. .++++.. .++.++.+|+++.
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~---V~~~~r~~~------~~~~~~~---------------~~~~~~~~Dl~~~ 56 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYE---VWATARKAE------DVEALAA---------------AGFTAVQLDVNDG 56 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH---------------CCCeEEEeeCCCH
Confidence 368999999999999999999999987 888898743 2222211 3567889999986
Q ss_pred CCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEEeC
Q psy17679 124 GLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVHVST 187 (303)
Q Consensus 124 ~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~iSS 187 (303)
+ .+.+++ .++|+|||+||.... ...+...+++|+.++..+++.+.+. .+..++|++||
T Consensus 57 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS 130 (274)
T PRK05693 57 A------ALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGS 130 (274)
T ss_pred H------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 6 444443 368999999997432 1345678899999999998887542 13468999999
Q ss_pred CcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHH--HHHHHHhh----
Q psy17679 188 AFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIG--MLVGIATG---- 255 (303)
Q Consensus 188 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~--~~~~~~~~---- 255 (303)
..+... ......|..+|...+.+.+.+... .. ++++||.+.+.+.... ........
T Consensus 131 ~~~~~~------------~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~ 198 (274)
T PRK05693 131 VSGVLV------------TPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPW 198 (274)
T ss_pred ccccCC------------CCCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCcc
Confidence 865421 112344667777677766554332 22 6788987744332110 00000000
Q ss_pred -----hhhhccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 256 -----VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 256 -----~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.......... -.....+++|+.++.++..+..
T Consensus 199 ~~~~~~~~~~~~~~~--~~~~~~~~~a~~i~~~~~~~~~ 235 (274)
T PRK05693 199 WPLREHIQARARASQ--DNPTPAAEFARQLLAAVQQSPR 235 (274)
T ss_pred HHHHHHHHHHHHhcc--CCCCCHHHHHHHHHHHHhCCCC
Confidence 0000000000 1235789999999999886543
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-14 Score=126.41 Aligned_cols=208 Identities=12% Similarity=0.043 Sum_probs=127.6
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHH-HHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
..+++|+++||||+++||+++++.|++.|+. |+++.|.... ..+.+ +++.. ....++.++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~---v~~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~~ 66 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVN---IAFTYNSNVE--EANKIAEDLEQ------------KYGIKAKAYPL 66 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHH--HHHHHHHHHHH------------hcCCceEEEEc
Confidence 3477899999999999999999999999987 7666654321 11111 11110 01246889999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------------cccHHHHHhhhHHHHHHHHHHHHhc--
Q psy17679 119 DCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------------DEHIKMAVKINVCGVQAMLQLAREM-- 176 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------------~~~~~~~~~~N~~~~~~ll~~a~~~-- 176 (303)
|++|.+ ++.++++ ++|++|||||.... ...+...+++|+.+...+.+.+.+.
T Consensus 67 D~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 140 (260)
T PRK08416 67 NILEPE------TYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRME 140 (260)
T ss_pred CCCCHH------HHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhh
Confidence 999876 4444433 68999999985310 1233457777887776665555432
Q ss_pred -CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHH-H
Q psy17679 177 -KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIG-M 248 (303)
Q Consensus 177 -~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~-~ 248 (303)
.+..+||++||..+.. +...+..|..+|...+.+.+.+...+. ..+.||++.+...... .
T Consensus 141 ~~~~g~iv~isS~~~~~------------~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~ 208 (260)
T PRK08416 141 KVGGGSIISLSSTGNLV------------YIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTN 208 (260)
T ss_pred ccCCEEEEEEecccccc------------CCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccC
Confidence 1446899999985432 122344567778888888877665542 6777987644321000 0
Q ss_pred HHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 249 LVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
........... .....+...+|+|+++++++...
T Consensus 209 ~~~~~~~~~~~-----~~~~r~~~p~~va~~~~~l~~~~ 242 (260)
T PRK08416 209 YEEVKAKTEEL-----SPLNRMGQPEDLAGACLFLCSEK 242 (260)
T ss_pred CHHHHHHHHhc-----CCCCCCCCHHHHHHHHHHHcChh
Confidence 00000000000 01123678999999999988754
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.4e-15 Score=145.08 Aligned_cols=207 Identities=15% Similarity=0.120 Sum_probs=137.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+.+++|+||||+|+||+++++.|++.|+. |++++|+.... +.+.+.+.. ..++.++.+|++
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga~---Vvl~~r~~~~~---~~~~~~l~~-------------~~~v~~v~~Dvt 480 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGAC---VVLADLDEEAA---EAAAAELGG-------------PDRALGVACDVT 480 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCE---EEEEeCCHHHH---HHHHHHHhc-------------cCcEEEEEecCC
Confidence 56789999999999999999999999986 88999975321 111111110 037889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCC-ceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDL-KAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~-~r~i 183 (303)
+.+ ++..+++ ++|+||||||.... ...+...+++|+.+...+++.+.+. ++. .+||
T Consensus 481 d~~------~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV 554 (681)
T PRK08324 481 DEA------AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIV 554 (681)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 876 4444443 68999999997532 2335678899999999997777542 133 6899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeeccee--cC-ccChHHHHHHH-H
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWI--DN-VYGPIGMLVGI-A 253 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~--~~-~~g~~~~~~~~-~ 253 (303)
++||..+.. +......|..+|...+.+.+.+...+. ++++||++ .+ .+.+....... .
T Consensus 555 ~vsS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~ 622 (681)
T PRK08324 555 FIASKNAVN------------PGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAA 622 (681)
T ss_pred EECCccccC------------CCCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhh
Confidence 999985532 222355678888888888887654332 67788876 22 12211111111 1
Q ss_pred hhhh----hhccCCCCccccceehhHHHHHHHHHHh
Q psy17679 254 TGVL----HTHLINLNTVTDMVPVDLVVNSMISIAW 285 (303)
Q Consensus 254 ~~~~----~~~~~~~~~~~~~i~v~D~a~ai~~~~~ 285 (303)
.+.. ...+..+.....+++++|+|++++.++.
T Consensus 623 ~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s 658 (681)
T PRK08324 623 YGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLAS 658 (681)
T ss_pred ccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhC
Confidence 1111 1123445556779999999999999885
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.7e-15 Score=127.48 Aligned_cols=157 Identities=15% Similarity=0.139 Sum_probs=111.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+++||||+|+||+++++.|++.|++ |++++|+..... . . ....++.++.+|+++.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~---v~~~~r~~~~~~----~----~------------~~~~~~~~~~~D~~~~ 57 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIA---VLGVARSRHPSL----A----A------------AAGERLAEVELDLSDA 57 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCE---EEEEecCcchhh----h----h------------ccCCeEEEEEeccCCH
Confidence 368999999999999999999999987 888898754210 0 0 0124688899999997
Q ss_pred CCCCCHHHHHHHh-----------ccccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCce
Q psy17679 124 GLGLSETDRATLV-----------KQVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLKA 181 (303)
Q Consensus 124 ~~~~~~~~~~~~~-----------~~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r 181 (303)
+ ++..++ ..+|++|||+|.... ...+...+++|+.++..+.+.+.+. .+..+
T Consensus 58 ~------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 131 (243)
T PRK07023 58 A------AAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERR 131 (243)
T ss_pred H------HHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCE
Confidence 6 344422 157999999997532 1234677889999977776666543 14579
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC---Cc--EEeecceecC
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN---RV--HISGTGWIDN 241 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~---~~--~ii~pg~~~~ 241 (303)
||++||..+.. +...+..|..+|...+.+.+.+... .. ..+.||++.+
T Consensus 132 iv~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t 184 (243)
T PRK07023 132 ILHISSGAARN------------AYAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDT 184 (243)
T ss_pred EEEEeChhhcC------------CCCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcccc
Confidence 99999985432 3335667888888899999877543 22 6777886643
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.1e-15 Score=127.95 Aligned_cols=206 Identities=13% Similarity=0.146 Sum_probs=130.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHH-HHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++++++||||+|+||.++++.|++.|+. |++++|+.+.. ... +.+.. ...++.++.+|+
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~---V~~~~r~~~~~---~~~~~~~~~-------------~~~~~~~~~~Dv 67 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGAN---VAVASRSQEKV---DAAVAQLQQ-------------AGPEGLGVSADV 67 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHHHHHHH-------------hCCceEEEECCC
Confidence 56789999999999999999999999987 88999874311 111 11111 014567899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVH 184 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~ 184 (303)
++.+ ++..+++ .+|+|||+||.... ...+...+++|+.++.++++++.+. ....+||+
T Consensus 68 ~~~~------~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~ 141 (264)
T PRK07576 68 RDYA------AVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQ 141 (264)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEE
Confidence 9866 4544443 57999999985321 2234667889999999998887653 12259999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+.. +......|..+|...+.+.+.+...+ . +.+.||.+.+.-+...... .....
T Consensus 142 iss~~~~~------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~---~~~~~ 206 (264)
T PRK07576 142 ISAPQAFV------------PMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAP---SPELQ 206 (264)
T ss_pred ECChhhcc------------CCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhccc---CHHHH
Confidence 99985432 22234557778888888887664433 2 6777876532110000000 00000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
..+........++...|+|++++.++..+
T Consensus 207 ~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 235 (264)
T PRK07576 207 AAVAQSVPLKRNGTKQDIANAALFLASDM 235 (264)
T ss_pred HHHHhcCCCCCCCCHHHHHHHHHHHcChh
Confidence 00000011234678899999999999754
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-14 Score=127.13 Aligned_cols=205 Identities=16% Similarity=0.146 Sum_probs=129.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++||||+|+||+++++.|++.|++ |++++|+.. ..+..+++... ..++.++.+|++
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~---Vv~~~r~~~---~~~~~~~~~~~-------------~~~~~~~~~Dl~ 64 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGAN---LILLDISPE---IEKLADELCGR-------------GHRCTAVVADVR 64 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEecCCHH---HHHHHHHHHHh-------------CCceEEEECCCC
Confidence 56789999999999999999999999987 888888642 11222222110 146788999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.. ++..+++ .+|+|||+||.... ...++..+++|+.++..+++.+... .+..+||+
T Consensus 65 ~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~ 138 (263)
T PRK08226 65 DPA------SVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVM 138 (263)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 876 4444443 68999999997432 1234567889999999888877542 14568999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHH-------HHH
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGM-------LVG 251 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~-------~~~ 251 (303)
+||..+... +...+..|..+|...+.+.+.+...+ . ..+.||.+.+....... ...
T Consensus 139 isS~~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~ 207 (263)
T PRK08226 139 MSSVTGDMV-----------ADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPES 207 (263)
T ss_pred ECcHHhccc-----------CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHH
Confidence 999854311 11123456677776777776554332 2 56778866443211100 000
Q ss_pred HHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 252 IATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.... .. .......+...+|+|++++.++...
T Consensus 208 ~~~~----~~-~~~p~~~~~~~~~va~~~~~l~~~~ 238 (263)
T PRK08226 208 VLTE----MA-KAIPLRRLADPLEVGELAAFLASDE 238 (263)
T ss_pred HHHH----Hh-ccCCCCCCCCHHHHHHHHHHHcCch
Confidence 0010 00 0111123568999999998887643
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-14 Score=124.92 Aligned_cols=194 Identities=15% Similarity=0.078 Sum_probs=125.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+++++||||+|+||.+++++|++.|+. |++++|++... +.+.+.+. ... ...++.++.+|+++.
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~---v~~~~r~~~~~---~~~~~~~~--------~~~--~~~~~~~~~~D~~~~ 65 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRD---LALCARRTDRL---EELKAELL--------ARY--PGIKVAVAALDVNDH 65 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCE---EEEEeCCHHHH---HHHHHHHH--------hhC--CCceEEEEEcCCCCH
Confidence 578999999999999999999999876 88888874321 11111111 000 024688999999997
Q ss_pred CCCCCHHHHHHHh-------ccccEEEEcceecccc-------ccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEe
Q psy17679 124 GLGLSETDRATLV-------KQVNIVFHGAATVRFD-------EHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVS 186 (303)
Q Consensus 124 ~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~~-------~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iS 186 (303)
+ ++..++ .++|++||+||..... ..+...+++|+.+...+++.+... .+..+||++|
T Consensus 66 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~s 139 (248)
T PRK08251 66 D------QVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLIS 139 (248)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 6 343333 3689999999975431 223567889999998888776432 2567999999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhhhc
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLHTH 260 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~ 260 (303)
|..+.... | .+...|..+|...+.+.+.+...+ . +.++||++.+.... +
T Consensus 140 S~~~~~~~----------~-~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~---------~----- 194 (248)
T PRK08251 140 SVSAVRGL----------P-GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA---------K----- 194 (248)
T ss_pred ccccccCC----------C-CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh---------c-----
Confidence 98543211 1 123346667776666666554332 2 67778865332210 0
Q ss_pred cCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 261 LINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 261 ~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.+ . ....+..+|.|++++.++...
T Consensus 195 ~~--~-~~~~~~~~~~a~~i~~~~~~~ 218 (248)
T PRK08251 195 AK--S-TPFMVDTETGVKALVKAIEKE 218 (248)
T ss_pred cc--c-CCccCCHHHHHHHHHHHHhcC
Confidence 00 0 112578899999999988754
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.7e-14 Score=125.41 Aligned_cols=206 Identities=14% Similarity=0.091 Sum_probs=126.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+++||||+|+||.++++.|++.|+. |++++|+... .+.+...+.. ...++.++.+|++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~---v~~~~r~~~~---~~~~~~~~~~------------~~~~~~~~~~Dl~~~ 63 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFK---VAIVDYNEET---AQAAADKLSK------------DGGKAIAVKADVSDR 63 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh------------cCCeEEEEECCCCCH
Confidence 578999999999999999999999987 8888887432 1111111110 014678899999997
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceEEEE
Q psy17679 124 GLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAFVHV 185 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~i~i 185 (303)
+ .+..+++ ++|+||||||.... ...++..+++|+.++..+++.+.+. +...++|++
T Consensus 64 ~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~ 137 (256)
T PRK08643 64 D------QVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINA 137 (256)
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 6 3444433 68999999987432 1234677889999988777776542 123589999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHh--hhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIAT--GVL 257 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~--~~~ 257 (303)
||..+... ......|..+|...+.+.+.+... .. +.+.||++.+..-.. ....... +..
T Consensus 138 sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~-~~~~~~~~~~~~ 204 (256)
T PRK08643 138 TSQAGVVG------------NPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFD-IAHQVGENAGKP 204 (256)
T ss_pred CccccccC------------CCCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhH-HHhhhccccCCC
Confidence 99854321 112334666777666666655433 22 677898664432111 0000000 000
Q ss_pred -----hhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 258 -----HTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 258 -----~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
....... ....+...+|+|+++..++...
T Consensus 205 ~~~~~~~~~~~~-~~~~~~~~~~va~~~~~L~~~~ 238 (256)
T PRK08643 205 DEWGMEQFAKDI-TLGRLSEPEDVANCVSFLAGPD 238 (256)
T ss_pred chHHHHHHhccC-CCCCCcCHHHHHHHHHHHhCcc
Confidence 0000000 1123568899999999988754
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.3e-14 Score=130.18 Aligned_cols=179 Identities=15% Similarity=0.083 Sum_probs=118.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+++||.++++.|++.|+. |++++|+.... .+.++++... . ...++.++.+|++
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~~---Vil~~R~~~~~--~~~~~~l~~~---------~--~~~~v~~~~~Dl~ 75 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGAE---VILPVRNRAKG--EAAVAAIRTA---------V--PDAKLSLRALDLS 75 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHHh---------C--CCCceEEEEecCC
Confidence 67899999999999999999999999987 88889975321 1222222110 0 0146889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEEe
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVHVS 186 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~iS 186 (303)
|.+ ++..+++ .+|++|||||.... ...++..+.+|+.+...+.+.+.+. .+..|+|++|
T Consensus 76 d~~------sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vs 149 (313)
T PRK05854 76 SLA------SVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQS 149 (313)
T ss_pred CHH------HHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 976 4444433 58999999997532 1345778999999988887776532 1346899999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC-----C-c--EEeecceecCc
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN-----R-V--HISGTGWIDNV 242 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~-----~-~--~ii~pg~~~~~ 242 (303)
|..+........+-....+..+...|..+|...+.+.+.+... . . +.+.||.+.+.
T Consensus 150 S~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 150 SIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred chhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence 9854322111111111123345567888888888887766431 1 2 67779977543
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.8e-15 Score=126.87 Aligned_cols=201 Identities=12% Similarity=0.134 Sum_probs=123.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++||||+|+||.++++.|+++|+. |.+..|+.. .++++... ...++.++.+|++
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~---v~~~~~~~~------~~~~~~~~------------~~~~~~~~~~D~~ 62 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAI---VGLHGTRVE------KLEALAAE------------LGERVKIFPANLS 62 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEcCCHH------HHHHHHHH------------hCCceEEEEccCC
Confidence 46789999999999999999999999875 777777532 22222110 0146788999999
Q ss_pred CCCCCCCHHHHHHH-------hccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATL-------VKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~-------~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++..+ +.++|+|||+||.... ...+...+++|+.+...+++++.+. .+..+||+
T Consensus 63 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 136 (245)
T PRK12936 63 DRD------EVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIIN 136 (245)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 876 44443 3468999999997532 2345678899999998888876532 25678999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+.... | ....|..+|...+.+.+.+... .. +.++||++.+..... .... .....
T Consensus 137 ~sS~~~~~~~----------~--~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~-~~~~-~~~~~- 201 (245)
T PRK12936 137 ITSVVGVTGN----------P--GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK-LNDK-QKEAI- 201 (245)
T ss_pred ECCHHhCcCC----------C--CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc-cChH-HHHHH-
Confidence 9998443211 0 1223445555445554443322 22 677898764432111 0000 00000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.. ......+....|+++++.+++..+
T Consensus 202 --~~-~~~~~~~~~~~~ia~~~~~l~~~~ 227 (245)
T PRK12936 202 --MG-AIPMKRMGTGAEVASAVAYLASSE 227 (245)
T ss_pred --hc-CCCCCCCcCHHHHHHHHHHHcCcc
Confidence 00 011123567999999999888654
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.3e-14 Score=127.66 Aligned_cols=204 Identities=12% Similarity=0.095 Sum_probs=130.2
Q ss_pred cCCcEEEEeCCc--chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGT--GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGat--G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+++|+++||||+ ++||+++++.|.+.|+. |++..|+.. ..+.++++... .... .++.+|
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~---Vil~~r~~~---~~~~~~~~~~~------------~~~~-~~~~~D 63 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAE---LAFTYLNEA---LKKRVEPIAQE------------LGSD-YVYELD 63 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCE---EEEEecCHH---HHHHHHHHHHh------------cCCc-eEEEec
Confidence 567999999997 79999999999999987 778888632 12233332211 0122 578999
Q ss_pred CCCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc-CCCc
Q psy17679 120 CSLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM-KDLK 180 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~ 180 (303)
++|.+ ++..++ .++|++|||||.... ...+...+++|+.++..+.+.+.+. ....
T Consensus 64 v~d~~------~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g 137 (274)
T PRK08415 64 VSKPE------HFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGA 137 (274)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCC
Confidence 99977 344433 368999999997421 1235678899999999888887754 1236
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHH-HHHHHH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIG-MLVGIA 253 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~-~~~~~~ 253 (303)
+||++||..+.. +...+..|..+|.....+.+.++..+. +.+.||++.+...... ......
T Consensus 138 ~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~ 205 (274)
T PRK08415 138 SVLTLSYLGGVK------------YVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMIL 205 (274)
T ss_pred cEEEEecCCCcc------------CCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHh
Confidence 899999985432 222345677788877777776654432 6777997755321100 000000
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.......+ ...+...+|+|+++++++...
T Consensus 206 ~~~~~~~p-----l~r~~~pedva~~v~fL~s~~ 234 (274)
T PRK08415 206 KWNEINAP-----LKKNVSIEEVGNSGMYLLSDL 234 (274)
T ss_pred hhhhhhCc-----hhccCCHHHHHHHHHHHhhhh
Confidence 00000011 112567899999999998754
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.2e-14 Score=126.43 Aligned_cols=206 Identities=12% Similarity=0.086 Sum_probs=131.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+||||+|+||+++++.|++.|+. |+++.|+... ++++... +.. ...++.++.+|++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~---Vi~~~r~~~~------~~~~~~~-----l~~----~~~~~~~~~~D~~ 68 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAK---VVLASRRVER------LKELRAE-----IEA----EGGAAHVVSLDVT 68 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH------HHHHHHH-----HHh----cCCcEEEEEecCC
Confidence 66799999999999999999999999986 8899997432 2221111 000 0146789999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC------
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD------ 178 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~------ 178 (303)
+.+ ++..+++ .+|++||++|.... ...+...+++|+.+...+++.+... ..
T Consensus 69 ~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (258)
T PRK06949 69 DYQ------SIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNT 142 (258)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCC
Confidence 876 4555443 68999999996432 2345677889999998888776532 01
Q ss_pred --CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHH
Q psy17679 179 --LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLV 250 (303)
Q Consensus 179 --~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~ 250 (303)
..++|++||..+.. +......|..+|...+.+.+.+...+ . ++++||++.+......+..
T Consensus 143 ~~~g~iv~~sS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~ 210 (258)
T PRK06949 143 KPGGRIINIASVAGLR------------VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET 210 (258)
T ss_pred CCCeEEEEECcccccC------------CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccCh
Confidence 35899999986542 12233456667777777776654432 2 6788987654332111111
Q ss_pred HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 251 GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.... ...... ....+...+|+++.+++++..++
T Consensus 211 ~~~~-~~~~~~----~~~~~~~p~~~~~~~~~l~~~~~ 243 (258)
T PRK06949 211 EQGQ-KLVSML----PRKRVGKPEDLDGLLLLLAADES 243 (258)
T ss_pred HHHH-HHHhcC----CCCCCcCHHHHHHHHHHHhChhh
Confidence 1000 001111 11235678999999999887544
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.7e-14 Score=123.65 Aligned_cols=193 Identities=10% Similarity=0.007 Sum_probs=124.5
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+|+++||||+|++|+++++.|+++|++ |+++.|++... ....++.+|+++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~---v~~~~r~~~~~--------------------------~~~~~~~~D~~~ 52 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQ---VIGIARSAIDD--------------------------FPGELFACDLAD 52 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE---EEEEeCCcccc--------------------------cCceEEEeeCCC
Confidence 4689999999999999999999999987 88999975421 112478999998
Q ss_pred CCCCCCHHHHHHHhc------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEe
Q psy17679 123 PGLGLSETDRATLVK------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVS 186 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iS 186 (303)
.+ ++..+++ ++|+|||++|.... ...+...+++|+.++.++.+.+... .+..+||++|
T Consensus 53 ~~------~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s 126 (234)
T PRK07577 53 IE------QTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNIC 126 (234)
T ss_pred HH------HHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEc
Confidence 76 4444443 68999999997543 2234567888999988877666432 1567999999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHH-H-HHHHHhhhhh
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIG-M-LVGIATGVLH 258 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~-~-~~~~~~~~~~ 258 (303)
|....+. .....|..+|...+.+.+.+... .. ++++||.+.+..-... . ......
T Consensus 127 S~~~~~~-------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~---- 189 (234)
T PRK07577 127 SRAIFGA-------------LDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEK---- 189 (234)
T ss_pred cccccCC-------------CCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHH----
Confidence 9853221 12345777777777777655432 22 7888987643321100 0 000000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...... ....+...+|+|.+++.++..+.
T Consensus 190 ~~~~~~-~~~~~~~~~~~a~~~~~l~~~~~ 218 (234)
T PRK07577 190 RVLASI-PMRRLGTPEEVAAAIAFLLSDDA 218 (234)
T ss_pred HHhhcC-CCCCCcCHHHHHHHHHHHhCccc
Confidence 000000 11124578999999999987653
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.8e-14 Score=123.31 Aligned_cols=203 Identities=12% Similarity=0.085 Sum_probs=130.2
Q ss_pred cCCcEEEEeCCcc--hhHHHHHHHHHhcCCCccEEEEEeCCCCcc---------cHHHHHHHHHHhHHHhhhhccCcCcC
Q psy17679 42 YRDKTIFLTGGTG--FMGKTVVEKLLRSCPHLKHIYLLVRPKKGK---------DIQERLDAIFEDRLFWRLRAEVPDFR 110 (303)
Q Consensus 42 ~~~~~vlItGatG--~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~---------~~~~~l~~l~~~~~~~~~~~~~~~~~ 110 (303)
+++++||||||+| +||.++++.|++.|+. |++++|++... .... +.+... ...
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~~---vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~------------~~~ 66 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGID---IFFTYWSPYDKTMPWGMHDKEPVL-LKEEIE------------SYG 66 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCc---EEEEcCCccccccccccchhhHHH-HHHHHH------------hcC
Confidence 4668999999995 7999999999999987 88888873211 1111 111110 112
Q ss_pred CceEEEEecCCCCCCCCCHHHHHHHh-------ccccEEEEcceecccc-------ccHHHHHhhhHHHHHHHHHHHHhc
Q psy17679 111 SKVSAVAGDCSLPGLGLSETDRATLV-------KQVNIVFHGAATVRFD-------EHIKMAVKINVCGVQAMLQLAREM 176 (303)
Q Consensus 111 ~~v~~~~~Dl~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~~-------~~~~~~~~~N~~~~~~ll~~a~~~ 176 (303)
.++.++.+|+++.+ ++..++ ..+|+|||+||..... ..++..+++|+.++..+++++...
T Consensus 67 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 140 (256)
T PRK12748 67 VRCEHMEIDLSQPY------APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQ 140 (256)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999876 343333 3589999999974321 234567889999999999887643
Q ss_pred ---CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH
Q psy17679 177 ---KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG 247 (303)
Q Consensus 177 ---~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~ 247 (303)
.+..+||++||..+.. |......|..+|...+.+++.+...+ . +.+.||.+.+......
T Consensus 141 ~~~~~~~~iv~~ss~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~ 208 (256)
T PRK12748 141 YDGKAGGRIINLTSGQSLG------------PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEE 208 (256)
T ss_pred hhhcCCeEEEEECCccccC------------CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChh
Confidence 1346899999985432 22234567788888888877664432 2 6778987654332211
Q ss_pred HHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 248 MLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
....... ... ...+...+|+++++..++...
T Consensus 209 ~~~~~~~----~~~-----~~~~~~~~~~a~~~~~l~~~~ 239 (256)
T PRK12748 209 LKHHLVP----KFP-----QGRVGEPVDAARLIAFLVSEE 239 (256)
T ss_pred HHHhhhc----cCC-----CCCCcCHHHHHHHHHHHhCcc
Confidence 1111110 001 112456799999998877754
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.4e-14 Score=126.79 Aligned_cols=209 Identities=9% Similarity=0.069 Sum_probs=130.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||.+++++|++.|+. |+++.|+.... +.+.+.... ...++.++.+|++
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~---vv~~~~~~~~~---~~~~~~~~~------------~~~~~~~~~~Dl~ 69 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGAT---IVFNDINQELV---DKGLAAYRE------------LGIEAHGYVCDVT 69 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeCCHHHH---HHHHHHHHh------------cCCceEEEEcCCC
Confidence 56789999999999999999999999987 77888764321 111111110 0146889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++..++. .+|++||+||.... ...+...+++|+.++..+.+.+... .+..+||+
T Consensus 70 ~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 143 (265)
T PRK07097 70 DED------GVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIIN 143 (265)
T ss_pred CHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 876 4444443 58999999998542 2334677889999988877776542 15679999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH-HHHHHHHhh--
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI-GMLVGIATG-- 255 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~-~~~~~~~~~-- 255 (303)
+||..+... ......|..+|...+.+.+.+...+ . +.+.||++.+..... .........
T Consensus 144 isS~~~~~~------------~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 211 (265)
T PRK07097 144 ICSMMSELG------------RETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHP 211 (265)
T ss_pred EcCccccCC------------CCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchh
Confidence 999854321 1233456666766777777665443 2 678898774432111 000000000
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
....+.. ......+...+|+|+.++.++..+
T Consensus 212 ~~~~~~~-~~~~~~~~~~~dva~~~~~l~~~~ 242 (265)
T PRK07097 212 FDQFIIA-KTPAARWGDPEDLAGPAVFLASDA 242 (265)
T ss_pred HHHHHHh-cCCccCCcCHHHHHHHHHHHhCcc
Confidence 0000000 001123667899999999998864
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.3e-14 Score=124.68 Aligned_cols=196 Identities=20% Similarity=0.143 Sum_probs=125.9
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLG 126 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~ 126 (303)
|+|+||||.+|+.+++.|++.+++ |.+++|+.+ .+..+++.. .+++++.+|+.|.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~---V~~l~R~~~----~~~~~~l~~---------------~g~~vv~~d~~~~~-- 56 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFS---VRALVRDPS----SDRAQQLQA---------------LGAEVVEADYDDPE-- 56 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGC---EEEEESSSH----HHHHHHHHH---------------TTTEEEES-TT-HH--
T ss_pred CEEECCccHHHHHHHHHHHhCCCC---cEEEEeccc----hhhhhhhhc---------------ccceEeecccCCHH--
Confidence 799999999999999999998887 999999873 222222222 57788999999877
Q ss_pred CCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCCCCCCC
Q psy17679 127 LSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPL 206 (303)
Q Consensus 127 ~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~ 206 (303)
.+.++++++|.|+.+.+... . .-.....+++++|++. +++|||+.|........ ...
T Consensus 57 ----~l~~al~g~d~v~~~~~~~~--~-------~~~~~~~~li~Aa~~a-gVk~~v~ss~~~~~~~~---------~~~ 113 (233)
T PF05368_consen 57 ----SLVAALKGVDAVFSVTPPSH--P-------SELEQQKNLIDAAKAA-GVKHFVPSSFGADYDES---------SGS 113 (233)
T ss_dssp ----HHHHHHTTCSEEEEESSCSC--C-------CHHHHHHHHHHHHHHH-T-SEEEESEESSGTTTT---------TTS
T ss_pred ----HHHHHHcCCceEEeecCcch--h-------hhhhhhhhHHHhhhcc-ccceEEEEEeccccccc---------ccc
Confidence 89999999999998888543 1 1223346889999999 89999965444322110 011
Q ss_pred ChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCcc-ChHHHHHHHHhhh-hhhccCCCCccccce-ehhHHHHHHHHH
Q psy17679 207 KYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVY-GPIGMLVGIATGV-LHTHLINLNTVTDMV-PVDLVVNSMISI 283 (303)
Q Consensus 207 ~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~-g~~~~~~~~~~~~-~~~~~~~~~~~~~~i-~v~D~a~ai~~~ 283 (303)
.+.......|...|++++...-.+ ++++||.++..+ .+........... ...++++++....++ ..+|++++++.+
T Consensus 114 ~p~~~~~~~k~~ie~~l~~~~i~~-t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~i 192 (233)
T PF05368_consen 114 EPEIPHFDQKAEIEEYLRESGIPY-TIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAI 192 (233)
T ss_dssp TTHHHHHHHHHHHHHHHHHCTSEB-EEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHH
T ss_pred cccchhhhhhhhhhhhhhhccccc-eeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHH
Confidence 122222235667788887763322 799998664222 1111100011111 124455666556665 999999999999
Q ss_pred HhhcccC
Q psy17679 284 AWSIGES 290 (303)
Q Consensus 284 ~~~~~~~ 290 (303)
+.+|...
T Consensus 193 l~~p~~~ 199 (233)
T PF05368_consen 193 LLDPEKH 199 (233)
T ss_dssp HHSGGGT
T ss_pred HcChHHh
Confidence 9987654
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.6e-14 Score=124.07 Aligned_cols=213 Identities=13% Similarity=0.081 Sum_probs=126.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|++.|+. |++++|+..... +..+++.. .. ...++.++.+|+
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~---V~~~~r~~~~~~--~~~~~~~~---------~~--~~~~~~~~~~D~ 68 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGAS---VAICGRDEERLA--SAEARLRE---------KF--PGARLLAARCDV 68 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeCCHHHHH--HHHHHHHh---------hC--CCceEEEEEecC
Confidence 356799999999999999999999999997 889999753211 11111111 00 013677899999
Q ss_pred CCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
++.+ ++..++ ..+|++|||||.... ...+...+++|+.+...+++.+.+. .+..+||
T Consensus 69 ~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv 142 (265)
T PRK07062 69 LDEA------DVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIV 142 (265)
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEE
Confidence 9976 344333 368999999997432 2245677888988877776665432 1456999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhC----cCCc--EEeecceecCccChHHHHHHHHhhh-
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMT----PNRV--HISGTGWIDNVYGPIGMLVGIATGV- 256 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~----~~~~--~ii~pg~~~~~~g~~~~~~~~~~~~- 256 (303)
++||..+... ...+..|..+|...+.+.+.+. +... +.+.||++.+......+........
T Consensus 143 ~isS~~~~~~------------~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~ 210 (265)
T PRK07062 143 CVNSLLALQP------------EPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQS 210 (265)
T ss_pred EeccccccCC------------CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCC
Confidence 9999865432 1123345555555555555443 3323 6777987754321111100000000
Q ss_pred ----hhhcc-CCCCccccceehhHHHHHHHHHHhhc
Q psy17679 257 ----LHTHL-INLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 257 ----~~~~~-~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...+. ...-....+...+|+|++++.++...
T Consensus 211 ~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~s~~ 246 (265)
T PRK07062 211 WEAWTAALARKKGIPLGRLGRPDEAARALFFLASPL 246 (265)
T ss_pred hHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHhCch
Confidence 00000 00001123567899999999987643
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.1e-14 Score=125.26 Aligned_cols=208 Identities=11% Similarity=0.093 Sum_probs=132.3
Q ss_pred cCCcEEEEeCCc--chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGT--GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGat--G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+++|+++||||+ +.||++++++|.+.|+. |++..|+.......+.++++... ...+.++.+|
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~---v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D 67 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAE---LGITYLPDEKGRFEKKVRELTEP-------------LNPSLFLPCD 67 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCE---EEEEecCcccchHHHHHHHHHhc-------------cCcceEeecC
Confidence 567899999986 79999999999999998 76666654322222333333211 1246688999
Q ss_pred CCCCCCCCCHHHHHHHh-------ccccEEEEcceecc-------c----cccHHHHHhhhHHHHHHHHHHHHhc-CCCc
Q psy17679 120 CSLPGLGLSETDRATLV-------KQVNIVFHGAATVR-------F----DEHIKMAVKINVCGVQAMLQLAREM-KDLK 180 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~-------~----~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~ 180 (303)
++|.+ ++..++ .++|++|||||... . ...+...+++|+.++..+.+.+.+. ....
T Consensus 68 l~d~~------~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g 141 (258)
T PRK07370 68 VQDDA------QIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGG 141 (258)
T ss_pred cCCHH------HHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCC
Confidence 99977 444333 36899999999642 1 1235678899999998888877653 1236
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHH-HHHHHH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIG-MLVGIA 253 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~-~~~~~~ 253 (303)
+||++||..+.. +...+..|..+|...+.+.+.+...+. +.+.||++.+...... ......
T Consensus 142 ~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~ 209 (258)
T PRK07370 142 SIVTLTYLGGVR------------AIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMI 209 (258)
T ss_pred eEEEEecccccc------------CCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhh
Confidence 899999986532 222345677888878887776654432 6777998755432100 000000
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. .. .......+...+|+++++..++.+..
T Consensus 210 ~~----~~-~~~p~~r~~~~~dva~~~~fl~s~~~ 239 (258)
T PRK07370 210 HH----VE-EKAPLRRTVTQTEVGNTAAFLLSDLA 239 (258)
T ss_pred hh----hh-hcCCcCcCCCHHHHHHHHHHHhChhh
Confidence 00 00 00011235678999999999887543
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.1e-14 Score=127.47 Aligned_cols=202 Identities=13% Similarity=0.065 Sum_probs=129.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|+. |++++|+..... ..++.++.+|++
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~---v~~~~~~~~~~~------------------------~~~~~~~~~D~~ 59 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGAN---VVNADIHGGDGQ------------------------HENYQFVPTDVS 59 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCccccc------------------------cCceEEEEccCC
Confidence 56789999999999999999999999987 888888654211 146778999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc----------------cccHHHHHhhhHHHHHHHHHHHHhc--
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF----------------DEHIKMAVKINVCGVQAMLQLAREM-- 176 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~----------------~~~~~~~~~~N~~~~~~ll~~a~~~-- 176 (303)
+.+ ++..+++ .+|++||+||.... ...+...+++|+.++..+++++...
T Consensus 60 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 133 (266)
T PRK06171 60 SAE------EVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMV 133 (266)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHH
Confidence 976 4444433 68999999996321 1234568889999999998888653
Q ss_pred -CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceec-CccChHHH
Q psy17679 177 -KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWID-NVYGPIGM 248 (303)
Q Consensus 177 -~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~-~~~g~~~~ 248 (303)
++..+||++||..+... ......|..+|...+.+.+.++..+ . +.+.||.+. ..+.....
T Consensus 134 ~~~~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~ 201 (266)
T PRK06171 134 KQHDGVIVNMSSEAGLEG------------SEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEY 201 (266)
T ss_pred hcCCcEEEEEccccccCC------------CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhh
Confidence 13468999999865421 1123456667777777777665433 2 678898763 22211111
Q ss_pred HHHH--Hhh----hhhhccCC--CCccccceehhHHHHHHHHHHhhcc
Q psy17679 249 LVGI--ATG----VLHTHLIN--LNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 249 ~~~~--~~~----~~~~~~~~--~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.... ..+ .....+.. ......+...+|+|+++.+++....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~ 249 (266)
T PRK06171 202 EEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRA 249 (266)
T ss_pred hhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhheeeeecccc
Confidence 0000 000 00000000 0011235678999999999887543
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.1e-14 Score=125.02 Aligned_cols=207 Identities=11% Similarity=0.112 Sum_probs=130.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|.+.|++ |++++|+... .+.+.+.+. ... ...++.++.+|++
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~---v~~~~r~~~~---~~~~~~~l~--------~~~--~~~~~~~~~~Dl~ 70 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGAD---VLIVARDADA---LAQARDELA--------EEF--PEREVHGLAADVS 70 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHHH--------hhC--CCCeEEEEECCCC
Confidence 56789999999999999999999999987 8888986432 111111111 000 0146888999999
Q ss_pred CCCCCCCHHHHHHH-------hccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATL-------VKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~-------~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++..+ +.++|+|||++|.... ...+...+.+|+.++..+++++.+. .+..+||+
T Consensus 71 ~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~ 144 (257)
T PRK09242 71 DDE------DRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVN 144 (257)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEE
Confidence 876 33333 3368999999997422 2345678899999999998887532 25579999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHH-HHHHHhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGM-LVGIATGVL 257 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~-~~~~~~~~~ 257 (303)
+||..+... ......|..+|...+.+.+.++..+ . +.+.||++.+....... .........
T Consensus 145 ~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~ 212 (257)
T PRK09242 145 IGSVSGLTH------------VRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVI 212 (257)
T ss_pred ECccccCCC------------CCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHH
Confidence 999865432 1223446667777777777654332 2 67789877544321100 000001000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
. .....-+...+|++.++..++...
T Consensus 213 ~-----~~~~~~~~~~~~va~~~~~l~~~~ 237 (257)
T PRK09242 213 E-----RTPMRRVGEPEEVAAAVAFLCMPA 237 (257)
T ss_pred h-----cCCCCCCcCHHHHHHHHHHHhCcc
Confidence 0 001122457799999999988643
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.4e-14 Score=123.95 Aligned_cols=208 Identities=13% Similarity=0.131 Sum_probs=124.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||.++++.|+++|+. |+++.|+.... .....+++.. ...++.++.+|+
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~---vvi~~~~~~~~-~~~~~~~l~~-------------~~~~~~~~~~Dl 66 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAK---VVINYRSDEEE-ANDVAEEIKK-------------AGGEAIAVKGDV 66 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCCHHH-HHHHHHHHHH-------------cCCeEEEEEecC
Confidence 367899999999999999999999999986 77777754211 1111111111 024677899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHH----HhcCCCceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLA----REMKDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a----~~~~~~~r~ 182 (303)
++.+ ++..+++ ++|++||+||.... ...+...+++|+.+...+++.+ .+.+...++
T Consensus 67 ~~~~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~i 140 (261)
T PRK08936 67 TVES------DVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNI 140 (261)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence 9876 4444433 68999999997432 1234567889988876655444 443124689
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhh----CcCCc--EEeecceecCccChHHHH-HHHHhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEM----TPNRV--HISGTGWIDNVYGPIGML-VGIATG 255 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~----~~~~~--~ii~pg~~~~~~g~~~~~-~~~~~~ 255 (303)
|++||..+.. |...+..|..+|...+.+.+.+ ..... +.+.||++.+......+. ......
T Consensus 141 v~~sS~~~~~------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~ 208 (261)
T PRK08936 141 INMSSVHEQI------------PWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRAD 208 (261)
T ss_pred EEEccccccC------------CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHH
Confidence 9999975432 2223344555664444544443 33333 788899775443211100 000011
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..... ....+...+|+++++.+++..+.
T Consensus 209 ~~~~~-----~~~~~~~~~~va~~~~~l~s~~~ 236 (261)
T PRK08936 209 VESMI-----PMGYIGKPEEIAAVAAWLASSEA 236 (261)
T ss_pred HHhcC-----CCCCCcCHHHHHHHHHHHcCccc
Confidence 00011 11235678999999999887654
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.1e-14 Score=122.35 Aligned_cols=204 Identities=11% Similarity=0.091 Sum_probs=130.4
Q ss_pred cCCcEEEEeCCc--chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGT--GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGat--G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+++|+++||||+ +.||.+++++|++.|+. |++..|+... .+.++++... ...+.++.+|
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~---v~l~~r~~~~---~~~~~~~~~~-------------~~~~~~~~~D 68 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGAE---LAVTYLNDKA---RPYVEPLAEE-------------LDAPIFLPLD 68 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCE---EEEEeCChhh---HHHHHHHHHh-------------hccceEEecC
Confidence 567999999998 59999999999999987 8788886431 2223332211 0234578999
Q ss_pred CCCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc-CCCc
Q psy17679 120 CSLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM-KDLK 180 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~ 180 (303)
+++.+ ++.+++ ..+|++|||||.... ...+...+++|+.++..+.+.+.+. ....
T Consensus 69 ~~~~~------~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g 142 (258)
T PRK07533 69 VREPG------QLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGG 142 (258)
T ss_pred cCCHH------HHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCC
Confidence 99976 444433 368999999997431 1345678899999999998887654 1235
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH-HHHHHH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG-MLVGIA 253 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~-~~~~~~ 253 (303)
++|++||..+.. +...+..|..+|...+.+.+.+...+ . +.+.||++.+...... ......
T Consensus 143 ~Ii~iss~~~~~------------~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~ 210 (258)
T PRK07533 143 SLLTMSYYGAEK------------VVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALL 210 (258)
T ss_pred EEEEEecccccc------------CCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHH
Confidence 899999875431 22245567777877777776655433 2 6777997754331110 000000
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
....... ....+...+|+|+++++++...
T Consensus 211 ~~~~~~~-----p~~r~~~p~dva~~~~~L~s~~ 239 (258)
T PRK07533 211 EDAAERA-----PLRRLVDIDDVGAVAAFLASDA 239 (258)
T ss_pred HHHHhcC-----CcCCCCCHHHHHHHHHHHhChh
Confidence 0000011 1123578899999999998754
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.9e-14 Score=122.50 Aligned_cols=205 Identities=14% Similarity=0.045 Sum_probs=124.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+++++||||+|+||.+++++|++.|+. |.+..+.... ....+.+.+.. ...++.++.+|+++.
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~---vv~~~~~~~~--~~~~~~~~l~~------------~~~~~~~~~~Dl~~~ 64 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYA---VCLNYLRNRD--AAEAVVQAIRR------------QGGEALAVAADVADE 64 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCe---EEEecCCCHH--HHHHHHHHHHh------------CCCcEEEEEeccCCH
Confidence 468999999999999999999999987 6555443211 11111111110 014577899999997
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc----C--CCceE
Q psy17679 124 GLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM----K--DLKAF 182 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~----~--~~~r~ 182 (303)
. ++..+++ .+|+|||+||.... ...+...+++|+.++..+++.+.+. + ...+|
T Consensus 65 ~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~i 138 (248)
T PRK06123 65 A------DVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAI 138 (248)
T ss_pred H------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEE
Confidence 6 4555443 68999999997532 1234567899999999888777653 0 12469
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGV 256 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~ 256 (303)
|++||..+.... +. .+..|..+|...+.+++.+...+ . ++++||++.+...............
T Consensus 139 v~~sS~~~~~~~----------~~-~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~ 207 (248)
T PRK06123 139 VNVSSMAARLGS----------PG-EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRV 207 (248)
T ss_pred EEECchhhcCCC----------CC-CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHH
Confidence 999998543211 10 11237777887888777664432 2 7888986643321110000000000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
....+ ..-+.+++|++++++.++...
T Consensus 208 ~~~~p-----~~~~~~~~d~a~~~~~l~~~~ 233 (248)
T PRK06123 208 KAGIP-----MGRGGTAEEVARAILWLLSDE 233 (248)
T ss_pred HhcCC-----CCCCcCHHHHHHHHHHHhCcc
Confidence 00000 111247899999999988754
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.9e-14 Score=122.62 Aligned_cols=199 Identities=15% Similarity=0.138 Sum_probs=128.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++||||+|++|..+++.|+++|++ |++++|++. .++++... + ....++.++.+|++
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----~-----~~~~~~~~~~~D~~ 63 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGAR---LLLVGRNAE------KLEALAAR-----L-----PYPGRHRWVVADLT 63 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-----H-----hcCCceEEEEccCC
Confidence 45689999999999999999999999987 889999642 12221110 0 01247889999999
Q ss_pred CCCCCCCHHHHHHHh------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEE
Q psy17679 122 LPGLGLSETDRATLV------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHV 185 (303)
Q Consensus 122 d~~~~~~~~~~~~~~------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~i 185 (303)
+.+ ++..++ ..+|+|||+||.... ...+...+++|+.++..+++.+.+. .+..++|++
T Consensus 64 d~~------~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~i 137 (263)
T PRK09072 64 SEA------GREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNV 137 (263)
T ss_pred CHH------HHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 876 444433 368999999997542 1234567889999999998888652 134689999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLHT 259 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~ 259 (303)
||..+.... .....|..+|...+.+.+.+...+ . +.+.||++.+..... . .. .
T Consensus 138 sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~-----~-~~---~ 196 (263)
T PRK09072 138 GSTFGSIGY------------PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSE-----A-VQ---A 196 (263)
T ss_pred cChhhCcCC------------CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhh-----h-cc---c
Confidence 998654221 122345566666555555544332 2 566788664432111 0 00 0
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. ......+..++|+|++++.++.+..
T Consensus 197 ~~--~~~~~~~~~~~~va~~i~~~~~~~~ 223 (263)
T PRK09072 197 LN--RALGNAMDDPEDVAAAVLQAIEKER 223 (263)
T ss_pred cc--ccccCCCCCHHHHHHHHHHHHhCCC
Confidence 00 0111235688999999999998654
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.2e-14 Score=126.06 Aligned_cols=205 Identities=10% Similarity=0.103 Sum_probs=129.3
Q ss_pred ccCCcEEEEeCCcc--hhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGGTG--FMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGatG--~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+++|++|||||++ .||+++++.|++.|+. |++..|+.. ..+.++++... . ....++.+
T Consensus 4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~---V~~~~r~~~---~~~~~~~~~~~------------~-g~~~~~~~ 64 (271)
T PRK06505 4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAE---LAFTYQGEA---LGKRVKPLAES------------L-GSDFVLPC 64 (271)
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCE---EEEecCchH---HHHHHHHHHHh------------c-CCceEEeC
Confidence 46789999999997 9999999999999997 777777532 12223322111 0 12346899
Q ss_pred cCCCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc-CCC
Q psy17679 119 DCSLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM-KDL 179 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~ 179 (303)
|++|.+ ++..++ ..+|++|||||.... ...+...+++|+.++..+++++.+. ...
T Consensus 65 Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~ 138 (271)
T PRK06505 65 DVEDIA------SVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDG 138 (271)
T ss_pred CCCCHH------HHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccC
Confidence 999976 444443 368999999996421 2345677889999998888777653 122
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH-HHHHH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG-MLVGI 252 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~-~~~~~ 252 (303)
.+||++||..+.. +...+..|..+|...+.+.+.++..+ . +.+.||++.+...... .....
T Consensus 139 G~Iv~isS~~~~~------------~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~ 206 (271)
T PRK06505 139 GSMLTLTYGGSTR------------VMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAI 206 (271)
T ss_pred ceEEEEcCCCccc------------cCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHH
Confidence 5899999985532 12234567777777777776665443 2 6788998755432100 00000
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
........+ ...+...+|+|+++++++...
T Consensus 207 ~~~~~~~~p-----~~r~~~peeva~~~~fL~s~~ 236 (271)
T PRK06505 207 FSYQQRNSP-----LRRTVTIDEVGGSALYLLSDL 236 (271)
T ss_pred HHHHhhcCC-----ccccCCHHHHHHHHHHHhCcc
Confidence 000000011 112467899999999988754
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.6e-14 Score=130.03 Aligned_cols=174 Identities=14% Similarity=0.054 Sum_probs=112.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||.++++.|++.|++ |++++|+... .+++... +. ....++.++.+|++
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~---V~~~~r~~~~------~~~~~~~-----l~----~~~~~~~~~~~Dl~ 65 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWH---VIMACRNLKK------AEAAAQE-----LG----IPPDSYTIIHIDLG 65 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCE---EEEEECCHHH------HHHHHHH-----hh----ccCCceEEEEecCC
Confidence 45789999999999999999999999987 8888886431 1111110 00 00146889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CC--Cce
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KD--LKA 181 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~--~~r 181 (303)
+.+ ++..+++ .+|+||||||.... ...++..+++|+.++..+++++.+. .+ ..|
T Consensus 66 ~~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~r 139 (322)
T PRK07453 66 DLD------SVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPR 139 (322)
T ss_pred CHH------HHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCce
Confidence 876 4544443 48999999996421 1245678899999999888877652 12 359
Q ss_pred EEEEeCCcccC----CCCccc--cC--C---------------CCCCCChhhHHHHHHHHHHHHHHhhCcCC-----c--
Q psy17679 182 FVHVSTAFTHC----PRERID--EE--F---------------YPVPLKYENLIQLISETGDEELSEMTPNR-----V-- 231 (303)
Q Consensus 182 ~i~iSS~~~~~----~~~~~~--E~--~---------------~~~~~~~~~~~~~~k~~~E~~~~~~~~~~-----~-- 231 (303)
||++||..... ...+.. ++ + ...+..+...|..+|...+.+.+.+...+ .
T Consensus 140 iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v 219 (322)
T PRK07453 140 LVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITF 219 (322)
T ss_pred EEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEE
Confidence 99999973211 000000 00 0 01223455678888877666665554432 2
Q ss_pred EEeeccee
Q psy17679 232 HISGTGWI 239 (303)
Q Consensus 232 ~ii~pg~~ 239 (303)
..++||.+
T Consensus 220 ~~v~PG~v 227 (322)
T PRK07453 220 SSLYPGCV 227 (322)
T ss_pred EEecCCcc
Confidence 67779876
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.1e-14 Score=123.23 Aligned_cols=208 Identities=13% Similarity=0.126 Sum_probs=123.8
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGL 125 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~ 125 (303)
+++||||+|+||+++++.|+++|++ |++++|+... ..+.+.+.+.. . .....+.++.+|+++.+
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~---v~~~~r~~~~--~~~~~~~~~~~--------~--~~~~~~~~~~~D~~~~~- 64 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAK---VFLTDINDAA--GLDAFAAEINA--------A--HGEGVAFAAVQDVTDEA- 64 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCcch--HHHHHHHHHHh--------c--CCCceEEEEEeecCCHH-
Confidence 4899999999999999999999987 8888887321 11222111110 0 00023446789999876
Q ss_pred CCCHHHHHHHh-------ccccEEEEcceecccc-------ccHHHHHhhhHH----HHHHHHHHHHhcCCCceEEEEeC
Q psy17679 126 GLSETDRATLV-------KQVNIVFHGAATVRFD-------EHIKMAVKINVC----GVQAMLQLAREMKDLKAFVHVST 187 (303)
Q Consensus 126 ~~~~~~~~~~~-------~~~dvVi~~a~~~~~~-------~~~~~~~~~N~~----~~~~ll~~a~~~~~~~r~i~iSS 187 (303)
.+..++ ..+|+|||+||..... ..+...+++|+. .+..++..+.+. +.++||++||
T Consensus 65 -----~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~ss 138 (251)
T PRK07069 65 -----QWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNISS 138 (251)
T ss_pred -----HHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEecC
Confidence 444433 3689999999975421 234566778887 556666666665 6689999999
Q ss_pred CcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC------c--EEeecceecCccChHHHHHHHHhhhhhh
Q psy17679 188 AFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR------V--HISGTGWIDNVYGPIGMLVGIATGVLHT 259 (303)
Q Consensus 188 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~------~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~ 259 (303)
..+.... .....|..+|...+.+.+.+...+ . +.+.||++.+..... ............
T Consensus 139 ~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~ 205 (251)
T PRK07069 139 VAAFKAE------------PDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDP-IFQRLGEEEATR 205 (251)
T ss_pred hhhccCC------------CCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhH-HhhhccchhHHH
Confidence 8654321 123346677777777776553321 1 567788664443211 111000000000
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....+.....+.+++|+|++++.++..+.
T Consensus 206 ~~~~~~~~~~~~~~~~va~~~~~l~~~~~ 234 (251)
T PRK07069 206 KLARGVPLGRLGEPDDVAHAVLYLASDES 234 (251)
T ss_pred HHhccCCCCCCcCHHHHHHHHHHHcCccc
Confidence 01011112235689999999999876553
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1e-14 Score=124.51 Aligned_cols=162 Identities=14% Similarity=0.108 Sum_probs=111.5
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+++|+||||+|++|+++++.|++.|+. |++++|++.... .+.+ ..++.++.+|++|.
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~---V~~~~r~~~~~~---~~~~-----------------~~~~~~~~~D~~d~ 57 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQ---VTATVRGPQQDT---ALQA-----------------LPGVHIEKLDMNDP 57 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCE---EEEEeCCCcchH---HHHh-----------------ccccceEEcCCCCH
Confidence 368999999999999999999999987 999999865321 1111 13567888999987
Q ss_pred CCCCCHHHHHHHhc-----cccEEEEcceeccc---------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEEeC
Q psy17679 124 GLGLSETDRATLVK-----QVNIVFHGAATVRF---------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVHVST 187 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-----~~dvVi~~a~~~~~---------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~iSS 187 (303)
+ ++..+.+ ++|+|||+||.... ...+...+.+|+.++..+++.+... .+..+++++||
T Consensus 58 ~------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss 131 (225)
T PRK08177 58 A------SLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSS 131 (225)
T ss_pred H------HHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEcc
Confidence 6 3444443 68999999987532 1234567788999999888887653 13357899998
Q ss_pred CcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCcc
Q psy17679 188 AFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVY 243 (303)
Q Consensus 188 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~ 243 (303)
.++.... .+......|..+|...+.+.+.++..+. +.+.||++.+..
T Consensus 132 ~~g~~~~---------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~ 184 (225)
T PRK08177 132 QLGSVEL---------PDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM 184 (225)
T ss_pred Ccccccc---------CCCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence 7654321 1111233467777778888876654332 677798775443
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.6e-14 Score=122.25 Aligned_cols=197 Identities=14% Similarity=0.053 Sum_probs=129.6
Q ss_pred EEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCCC
Q psy17679 48 FLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGL 127 (303)
Q Consensus 48 lItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~ 127 (303)
+||||+|++|+++++.|++.|+. |++++|++.. ++.+... +. ...++.++.+|+++.+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~---v~~~~r~~~~------~~~~~~~-----~~-----~~~~~~~~~~Dl~~~~--- 58 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGAR---VTIASRSRDR------LAAAARA-----LG-----GGAPVRTAALDITDEA--- 58 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCE---EEEEeCCHHH------HHHHHHH-----Hh-----cCCceEEEEccCCCHH---
Confidence 69999999999999999999987 8889997421 1111110 00 0246888999999977
Q ss_pred CHHHHHHHhc---cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCcc
Q psy17679 128 SETDRATLVK---QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERI 197 (303)
Q Consensus 128 ~~~~~~~~~~---~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~ 197 (303)
++.++++ ++|++||++|.... ...+...+++|+.++..++++.... +..+||++||..+..
T Consensus 59 ---~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~g~iv~~ss~~~~~----- 129 (230)
T PRK07041 59 ---AVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA-PGGSLTFVSGFAAVR----- 129 (230)
T ss_pred ---HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc-CCeEEEEECchhhcC-----
Confidence 5666665 58999999997432 2345678899999999999955444 567999999996543
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc----EEeecceecCccChHH---HHHHHHhhhhhhccCCCCccccc
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPNRV----HISGTGWIDNVYGPIG---MLVGIATGVLHTHLINLNTVTDM 270 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~----~ii~pg~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~ 270 (303)
+......|..+|...+.+.+.+...+. +.+.||++.+.+.... ............+. ...+
T Consensus 130 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 197 (230)
T PRK07041 130 -------PSASGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLP-----ARRV 197 (230)
T ss_pred -------CCCcchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCC-----CCCC
Confidence 222445677888888888877654432 6777887643321110 00000100000111 1124
Q ss_pred eehhHHHHHHHHHHhhc
Q psy17679 271 VPVDLVVNSMISIAWSI 287 (303)
Q Consensus 271 i~v~D~a~ai~~~~~~~ 287 (303)
...+|+|++++.++.++
T Consensus 198 ~~~~dva~~~~~l~~~~ 214 (230)
T PRK07041 198 GQPEDVANAILFLAANG 214 (230)
T ss_pred cCHHHHHHHHHHHhcCC
Confidence 57899999999998754
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.1e-14 Score=122.45 Aligned_cols=205 Identities=11% Similarity=0.047 Sum_probs=128.1
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+|+||||+|++|.++++.|++.|+. |++++|+... .+.+.+.+. .. ...++.++.+|+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~---Vi~~~r~~~~---~~~~~~~l~--------~~---~~~~~~~~~~d~ 71 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGAT---VILLGRTEEK---LEAVYDEIE--------AA---GGPQPAIIPLDL 71 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCc---EEEEeCCHHH---HHHHHHHHH--------hc---CCCCceEEEecc
Confidence 567899999999999999999999999987 8899997431 111111111 00 114667888888
Q ss_pred CCCCCCC---CHHHHHHHhccccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEe
Q psy17679 121 SLPGLGL---SETDRATLVKQVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVS 186 (303)
Q Consensus 121 ~d~~~~~---~~~~~~~~~~~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iS 186 (303)
++.+... -...+.+.+..+|+|||+|+.... ...+...+++|+.++..+++++... .+..+||++|
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~s 151 (247)
T PRK08945 72 LTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTS 151 (247)
T ss_pred cCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEc
Confidence 7432100 000122223368999999987432 1335678899999988888877531 2678999999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHhhhhhhc
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIATGVLHTH 260 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~~~~~~~ 260 (303)
|..+... ......|..+|...+.+++.+...+. .++.||.+.+...... . .
T Consensus 152 s~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~-----~----~-- 208 (247)
T PRK08945 152 SSVGRQG------------RANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASA-----F----P-- 208 (247)
T ss_pred cHhhcCC------------CCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhh-----c----C--
Confidence 9854321 11223467777777887776544332 5666875533321100 0 0
Q ss_pred cCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 261 LINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 261 ~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+...+|+++.++.++..+.
T Consensus 209 ---~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (247)
T PRK08945 209 ---GEDPQKLKTPEDIMPLYLYLMGDDS 233 (247)
T ss_pred ---cccccCCCCHHHHHHHHHHHhCccc
Confidence 0111236788999999999876544
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.5e-14 Score=121.17 Aligned_cols=200 Identities=15% Similarity=0.178 Sum_probs=124.4
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLG 126 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~ 126 (303)
|+|||++|++|.++++.|+++|++ |++++|+.... .....+.+.. ...++.++.+|+++..
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~---v~~~~r~~~~~-~~~~~~~~~~-------------~~~~~~~~~~D~~~~~-- 61 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAK---VIITYRSSEEG-AEEVVEELKA-------------YGVKALGVVCDVSDRE-- 61 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCchhH-HHHHHHHHHh-------------cCCceEEEEecCCCHH--
Confidence 589999999999999999999987 88888865211 1111111111 1146789999999876
Q ss_pred CCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCCc
Q psy17679 127 LSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTAF 189 (303)
Q Consensus 127 ~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~~ 189 (303)
++..++. .+|+|||++|.... ...++..+++|+.++..+++.+... .+.++|+++||..
T Consensus 62 ----~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~ 137 (239)
T TIGR01830 62 ----DVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVV 137 (239)
T ss_pred ----HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCcc
Confidence 4555443 57999999997532 1334677889999999999888653 2567999999974
Q ss_pred ccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhhhhccCC
Q psy17679 190 THCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVLHTHLIN 263 (303)
Q Consensus 190 ~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (303)
+.... .....|..+|...+.+.+.+... .. ++++||.+.+.... .............
T Consensus 138 ~~~g~------------~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~-~~~~~~~~~~~~~---- 200 (239)
T TIGR01830 138 GLMGN------------AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD-KLSEKVKKKILSQ---- 200 (239)
T ss_pred ccCCC------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh-hcChHHHHHHHhc----
Confidence 43211 12234666666666666554432 22 77788865332110 0000000000000
Q ss_pred CCccccceehhHHHHHHHHHHhhc
Q psy17679 264 LNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 264 ~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.....+.+++|++++++.++...
T Consensus 201 -~~~~~~~~~~~~a~~~~~~~~~~ 223 (239)
T TIGR01830 201 -IPLGRFGTPEEVANAVAFLASDE 223 (239)
T ss_pred -CCcCCCcCHHHHHHHHHHHhCcc
Confidence 01123678999999999888543
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.3e-14 Score=123.40 Aligned_cols=207 Identities=14% Similarity=0.060 Sum_probs=127.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+++||||+|+||.++++.|++.|+. |+++.|++... .+..+.+.. ...++.++.+|+++.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~---v~~~~r~~~~~--~~~~~~l~~-------------~~~~~~~~~~Dl~~~~ 62 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFA---VAVADLNEETA--KETAKEINQ-------------AGGKAVAYKLDVSDKD 62 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHh-------------cCCeEEEEEcCCCCHH
Confidence 57999999999999999999999987 88888864211 111111111 1246888999999977
Q ss_pred CCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHh----cCCCceEEEEe
Q psy17679 125 LGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLARE----MKDLKAFVHVS 186 (303)
Q Consensus 125 ~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~----~~~~~r~i~iS 186 (303)
++.++++ .+|+|||++|.... ...++..+++|+.++..+++++.+ .+...++|++|
T Consensus 63 ------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~s 136 (254)
T TIGR02415 63 ------QVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAA 136 (254)
T ss_pred ------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 4444433 57999999997432 233457788999998877766653 21236899999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHh--hhh-
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIAT--GVL- 257 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~--~~~- 257 (303)
|..+... ...+..|..+|...+.+.+.+...+ . ..+.||.+.+..... +...... +..
T Consensus 137 S~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~-~~~~~~~~~~~~~ 203 (254)
T TIGR02415 137 SIAGHEG------------NPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEE-IDEETSEIAGKPI 203 (254)
T ss_pred chhhcCC------------CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhh-hhhhhhhcccCch
Confidence 9854321 1134456677777777776554332 2 677788664332111 1100000 000
Q ss_pred ---hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 ---HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ---~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...+...-....+..++|+++++..++..+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 237 (254)
T TIGR02415 204 GEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDS 237 (254)
T ss_pred HHHHHHHHhhCCCCCCCCHHHHHHHHHhhccccc
Confidence 0000000011236788999999999998764
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.6e-14 Score=121.68 Aligned_cols=205 Identities=17% Similarity=0.086 Sum_probs=124.1
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+++||||+|+||++++++|+++|+. |++++|++... .+..+++.. ..++.++.+|++|.+
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~--~~~~~~l~~--------------~~~~~~~~~Dv~d~~ 61 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGAR---VVISSRNEENL--EKALKELKE--------------YGEVYAVKADLSDKD 61 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCE---EEEEeCCHHHH--HHHHHHHHh--------------cCCceEEEcCCCCHH
Confidence 57999999999999999999999987 88888874311 111111111 135778999999876
Q ss_pred CCCCHHHHHHHh-------ccccEEEEcceeccc---------cccHHHHHhhhHHHHHHHHHHH----HhcCCCceEEE
Q psy17679 125 LGLSETDRATLV-------KQVNIVFHGAATVRF---------DEHIKMAVKINVCGVQAMLQLA----REMKDLKAFVH 184 (303)
Q Consensus 125 ~~~~~~~~~~~~-------~~~dvVi~~a~~~~~---------~~~~~~~~~~N~~~~~~ll~~a----~~~~~~~r~i~ 184 (303)
++..++ ..+|++|||||.... ...+...+.+|+.++..+...+ .+.++..+||+
T Consensus 62 ------~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~ 135 (259)
T PRK08340 62 ------DLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVY 135 (259)
T ss_pred ------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 444444 368999999996421 1223445677877765554433 22124568999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHh--h-
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIAT--G- 255 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~--~- 255 (303)
+||..+.. +...+..|..+|...+.+.+.++..+. ..+.||++.+..... ....... +
T Consensus 136 isS~~~~~------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~-~~~~~~~~~~~ 202 (259)
T PRK08340 136 LSSVSVKE------------PMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARE-NLARIAEERGV 202 (259)
T ss_pred EeCcccCC------------CCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHH-HHHhhhhccCC
Confidence 99986532 222344566777777777776655433 567798775543211 1100000 0
Q ss_pred ---h--hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 ---V--LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ---~--~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. ........ ....+...+|+|+++++++..++
T Consensus 203 ~~~~~~~~~~~~~~-p~~r~~~p~dva~~~~fL~s~~~ 239 (259)
T PRK08340 203 SFEETWEREVLERT-PLKRTGRWEELGSLIAFLLSENA 239 (259)
T ss_pred chHHHHHHHHhccC-CccCCCCHHHHHHHHHHHcCccc
Confidence 0 00001000 11236788999999999988653
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-13 Score=120.24 Aligned_cols=208 Identities=14% Similarity=0.075 Sum_probs=129.1
Q ss_pred ccCCcEEEEeCCcc--hhHHHHHHHHHhcCCCccEEEEEeCCCCcc-----cHHHHHHHHHHhHHHhhhhccCcCcCCce
Q psy17679 41 FYRDKTIFLTGGTG--FMGKTVVEKLLRSCPHLKHIYLLVRPKKGK-----DIQERLDAIFEDRLFWRLRAEVPDFRSKV 113 (303)
Q Consensus 41 ~~~~~~vlItGatG--~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~-----~~~~~l~~l~~~~~~~~~~~~~~~~~~~v 113 (303)
.+++|+++||||+| +||.++++.|+++|+. |++..|..... ...+..+++.. .+. ....++
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~---vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~~g~~~ 70 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGAD---IFFTYWTAYDKEMPWGVDQDEQIQLQE-----ELL----KNGVKV 70 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCe---EEEEecccccccccccccHHHHHHHHH-----HHH----hcCCeE
Confidence 36789999999995 8999999999999987 66665432100 00111111111 111 112467
Q ss_pred EEEEecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---
Q psy17679 114 SAVAGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM--- 176 (303)
Q Consensus 114 ~~~~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~--- 176 (303)
.++.+|+++.+ ++..++. .+|++||+||.... ...++..+++|+.+...+.+.+.+.
T Consensus 71 ~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 144 (256)
T PRK12859 71 SSMELDLTQND------APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDK 144 (256)
T ss_pred EEEEcCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 88999999977 4444443 57999999997432 1234567889999988876555432
Q ss_pred CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHH
Q psy17679 177 KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLV 250 (303)
Q Consensus 177 ~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~ 250 (303)
.+..+||++||..+.. +...+..|..+|...+.+.+.+...+. +.+.||++.+.........
T Consensus 145 ~~~g~iv~isS~~~~~------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~ 212 (256)
T PRK12859 145 KSGGRIINMTSGQFQG------------PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQ 212 (256)
T ss_pred cCCeEEEEEcccccCC------------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHH
Confidence 1346999999986532 333456777888888888776654432 6778987755432211111
Q ss_pred HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 251 GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.+ .. . . + ...+...+|+|+++..++...
T Consensus 213 ~~-~~---~-~--~--~~~~~~~~d~a~~~~~l~s~~ 240 (256)
T PRK12859 213 GL-LP---M-F--P--FGRIGEPKDAARLIKFLASEE 240 (256)
T ss_pred HH-Hh---c-C--C--CCCCcCHHHHHHHHHHHhCcc
Confidence 11 10 0 0 0 112457899999999988754
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.4e-14 Score=122.61 Aligned_cols=207 Identities=9% Similarity=0.060 Sum_probs=130.5
Q ss_pred cCCcEEEEeCCc--chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGT--GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGat--G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+++|+++||||+ +.||.+++++|++.|+. |++..|+.... +.++++... . . ..++.++.+|
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~---v~~~~r~~~~~---~~~~~~~~~---------~-~-~~~~~~~~~D 67 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAK---LVFTYAGERLE---KEVRELADT---------L-E-GQESLLLPCD 67 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCE---EEEecCcccch---HHHHHHHHH---------c-C-CCceEEEecC
Confidence 567999999997 89999999999999987 77777753222 233333221 0 0 1467789999
Q ss_pred CCCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc-CCCc
Q psy17679 120 CSLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM-KDLK 180 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~ 180 (303)
++|.+ ++..++ .++|++|||||.... ...+...+++|+.+...+.+.+.+. ....
T Consensus 68 v~d~~------~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g 141 (257)
T PRK08594 68 VTSDE------EITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGG 141 (257)
T ss_pred CCCHH------HHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCc
Confidence 99977 343333 368999999996421 1123457788999988888777654 1235
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHH-HHHHHH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIG-MLVGIA 253 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~-~~~~~~ 253 (303)
+||++||..+.. +...+..|..+|...+.+.+.+...+. +.+.||.+.+...... ......
T Consensus 142 ~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~ 209 (257)
T PRK08594 142 SIVTLTYLGGER------------VVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSIL 209 (257)
T ss_pred eEEEEcccCCcc------------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHH
Confidence 899999986542 122345677788878887776654332 6777987754321100 000000
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....... ....+...+|+|+++++++...+
T Consensus 210 ~~~~~~~-----p~~r~~~p~~va~~~~~l~s~~~ 239 (257)
T PRK08594 210 KEIEERA-----PLRRTTTQEEVGDTAAFLFSDLS 239 (257)
T ss_pred HHHhhcC-----CccccCCHHHHHHHHHHHcCccc
Confidence 0000000 11235678999999999887543
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.8e-14 Score=124.78 Aligned_cols=213 Identities=12% Similarity=0.046 Sum_probs=131.1
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+++|||+ |+||+++++.|. .|++ |++++|+.... .+..+++.. ...++.++.+|++|.
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~---Vv~~~r~~~~~--~~~~~~l~~-------------~~~~~~~~~~Dv~d~ 61 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKK---VLLADYNEENL--EAAAKTLRE-------------AGFDVSTQEVDVSSR 61 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCE---EEEEeCCHHHH--HHHHHHHHh-------------cCCeEEEEEeecCCH
Confidence 578999998 799999999996 7887 88889864321 111111111 014678899999997
Q ss_pred CCCCCHHHHHHHh------ccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeCCcccCCCC-
Q psy17679 124 GLGLSETDRATLV------KQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVSTAFTHCPRE- 195 (303)
Q Consensus 124 ~~~~~~~~~~~~~------~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS~~~~~~~~- 195 (303)
+ ++..++ ..+|++|||||.......+...+++|+.++.++++.+.+. ....++|++||..+.....
T Consensus 62 ~------~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~ 135 (275)
T PRK06940 62 E------SVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPAL 135 (275)
T ss_pred H------HHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCccc
Confidence 6 444443 3689999999986555667889999999999999888654 1224678888885543210
Q ss_pred ---------ccccCCC-CC----C---CChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH---
Q psy17679 196 ---------RIDEEFY-PV----P---LKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML--- 249 (303)
Q Consensus 196 ---------~~~E~~~-~~----~---~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~--- 249 (303)
....... .. + ...+..|..+|...+.+.+.++..+ . +.+.||++.+......+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~ 215 (275)
T PRK06940 136 TAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPR 215 (275)
T ss_pred chhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCc
Confidence 0000000 00 1 0234568888887777776554332 2 677799886654321110
Q ss_pred HHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 250 VGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...........+ ...+...+|+|+++++++...
T Consensus 216 ~~~~~~~~~~~p-----~~r~~~peeia~~~~fL~s~~ 248 (275)
T PRK06940 216 GDGYRNMFAKSP-----AGRPGTPDEIAALAEFLMGPR 248 (275)
T ss_pred hHHHHHHhhhCC-----cccCCCHHHHHHHHHHHcCcc
Confidence 000000000111 123678899999999988644
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.4e-14 Score=120.53 Aligned_cols=198 Identities=15% Similarity=0.152 Sum_probs=123.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|++|||||+|++|+++++.|++.|+. |+++.|... ...+++.... . ....++.++.+|+.+..
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~---v~~~~r~~~-----~~~~~~~~~~-----~----~~~~~~~~~~~D~~~~~ 63 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYR---VAANCGPNE-----ERAEAWLQEQ-----G----ALGFDFRVVEGDVSSFE 63 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCCH-----HHHHHHHHHH-----H----hhCCceEEEEecCCCHH
Confidence 57999999999999999999999987 778887321 1111111100 0 00147889999999876
Q ss_pred CCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEEEEe
Q psy17679 125 LGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFVHVS 186 (303)
Q Consensus 125 ~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i~iS 186 (303)
++..++ ..+|+|||++|.... ...+...+++|+.++..+++.+. .. +.++||++|
T Consensus 64 ------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~is 136 (242)
T TIGR01829 64 ------SCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINIS 136 (242)
T ss_pred ------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEc
Confidence 444333 368999999997532 12345677889999877665553 33 567999999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccCh---HHHHHHHHhhhh
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGP---IGMLVGIATGVL 257 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~---~~~~~~~~~~~~ 257 (303)
|.++... ...+..|..+|...+.+.+.+... .. +.+.||++.+.... ..+...+....
T Consensus 137 s~~~~~~------------~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~- 203 (242)
T TIGR01829 137 SVNGQKG------------QFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQI- 203 (242)
T ss_pred chhhcCC------------CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcC-
Confidence 9855422 112345667777666666555332 22 67889877544321 11111111111
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
....+...+|+++++..++.++
T Consensus 204 --------~~~~~~~~~~~a~~~~~l~~~~ 225 (242)
T TIGR01829 204 --------PVGRLGRPEEIAAAVAFLASEE 225 (242)
T ss_pred --------CCCCCcCHHHHHHHHHHHcCch
Confidence 1112456789999998877654
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.9e-14 Score=117.10 Aligned_cols=174 Identities=16% Similarity=0.226 Sum_probs=120.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+++||||+|+||.++++.|.++ +. |++++|+.. .+.+|+++.+
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~---vi~~~r~~~--------------------------------~~~~D~~~~~ 44 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HE---VITAGRSSG--------------------------------DVQVDITDPA 44 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-Cc---EEEEecCCC--------------------------------ceEecCCChH
Confidence 47999999999999999999987 65 888888531 3688999877
Q ss_pred CCCCHHHHHHHhc---cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeCCcccCC
Q psy17679 125 LGLSETDRATLVK---QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVSTAFTHCP 193 (303)
Q Consensus 125 ~~~~~~~~~~~~~---~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS~~~~~~ 193 (303)
++..+++ ++|++||+||.... ...+...+++|+.++.++++++.+. .+..+|+++||.++..
T Consensus 45 ------~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~- 117 (199)
T PRK07578 45 ------SIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE- 117 (199)
T ss_pred ------HHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC-
Confidence 5655554 78999999997432 2235677889999999999888653 1335799999886532
Q ss_pred CCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC---Cc--EEeecceecCccChHHHHHHHHhhhhhhccCCCCccc
Q psy17679 194 RERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN---RV--HISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVT 268 (303)
Q Consensus 194 ~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~---~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 268 (303)
+......|..+|...+.+.+.++.. .. +.+.||++.+..... +. ... ..
T Consensus 118 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~--------~~--~~~-----~~ 171 (199)
T PRK07578 118 -----------PIPGGASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEKY--------GP--FFP-----GF 171 (199)
T ss_pred -----------CCCCchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhhh--------hh--cCC-----CC
Confidence 2223455777777777777655432 22 677798764432100 00 011 12
Q ss_pred cceehhHHHHHHHHHHhhc
Q psy17679 269 DMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 269 ~~i~v~D~a~ai~~~~~~~ 287 (303)
.++..+|+|+++..++...
T Consensus 172 ~~~~~~~~a~~~~~~~~~~ 190 (199)
T PRK07578 172 EPVPAARVALAYVRSVEGA 190 (199)
T ss_pred CCCCHHHHHHHHHHHhccc
Confidence 3689999999999888743
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.5e-14 Score=122.12 Aligned_cols=205 Identities=16% Similarity=0.109 Sum_probs=123.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+|+||||+|+||..+++.|++.|++ |.++.+.+.. ......+++.. ...++.++.+|+++.
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~---v~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~~~Dl~~~ 64 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWS---VGINYARDAA-AAEETADAVRA-------------AGGRACVVAGDVANE 64 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCE---EEEEeCCCHH-HHHHHHHHHHh-------------cCCcEEEEEeccCCH
Confidence 578999999999999999999999987 6555443211 11111111111 114788999999987
Q ss_pred CCCCCHHHHHHHh-------ccccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CC---CceE
Q psy17679 124 GLGLSETDRATLV-------KQVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KD---LKAF 182 (303)
Q Consensus 124 ~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~---~~r~ 182 (303)
. ++..++ ..+|++||+||.... ...+...+.+|+.++..+++.+.+. .+ ..+|
T Consensus 65 ~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~i 138 (248)
T PRK06947 65 A------DVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAI 138 (248)
T ss_pred H------HHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 6 344333 368999999996432 1223567889999988887554432 11 2469
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH-HHHHHHHhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI-GMLVGIATG 255 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~-~~~~~~~~~ 255 (303)
|++||..+.... + ..+..|..+|...+.+.+.++..+ . ++++||++.+..... ..... ...
T Consensus 139 i~~sS~~~~~~~----------~-~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~-~~~ 206 (248)
T PRK06947 139 VNVSSIASRLGS----------P-NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGR-AAR 206 (248)
T ss_pred EEECchhhcCCC----------C-CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHH-HHH
Confidence 999998543211 1 112346677777777776655443 2 788899875543211 00000 000
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
... . .+ ..-...++|+++.++.++..+.
T Consensus 207 -~~~-~-~~--~~~~~~~e~va~~~~~l~~~~~ 234 (248)
T PRK06947 207 -LGA-Q-TP--LGRAGEADEVAETIVWLLSDAA 234 (248)
T ss_pred -Hhh-c-CC--CCCCcCHHHHHHHHHHHcCccc
Confidence 000 0 01 1113678999999999888664
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.7e-14 Score=119.26 Aligned_cols=192 Identities=9% Similarity=0.038 Sum_probs=124.6
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+++||||+|+||+++++.|++.|++ |++++|++... .+. +.. .++.++.+|+++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~--~~~---~~~---------------~~~~~~~~D~~~~ 58 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQP---VIVSYRTHYPA--IDG---LRQ---------------AGAQCIQADFSTN 58 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCe---EEEEeCCchhH--HHH---HHH---------------cCCEEEEcCCCCH
Confidence 478999999999999999999999997 88889875421 111 110 2467899999987
Q ss_pred CCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC--CceEEE
Q psy17679 124 GLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD--LKAFVH 184 (303)
Q Consensus 124 ~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~--~~r~i~ 184 (303)
+ ++..++ ..+|++||+||.... ...+...+++|+.++..+.+.+.+. .+ ..++|+
T Consensus 59 ~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~ 132 (236)
T PRK06483 59 A------GIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIH 132 (236)
T ss_pred H------HHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEE
Confidence 6 344333 358999999996421 2345678889999987776666542 12 458999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecceecCccCh-HHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGWIDNVYGP-IGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~~~~~~g~-~~~~~~~~~~~~~ 258 (303)
+||..+.. +...+..|..+|...+.+.+.++..+ . +.+.||++....+. ...........
T Consensus 133 ~ss~~~~~------------~~~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~~~~~~~~~~~~-- 198 (236)
T PRK06483 133 ITDYVVEK------------GSDKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDDAAYRQKALAKS-- 198 (236)
T ss_pred Ecchhhcc------------CCCCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCCHHHHHHHhccC--
Confidence 99874432 12234467788888888887665443 2 67889976322221 11111111110
Q ss_pred hccCCCCccccceehhHHHHHHHHHHh
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAW 285 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~ 285 (303)
... -+...+|+|+++..++.
T Consensus 199 ------~~~-~~~~~~~va~~~~~l~~ 218 (236)
T PRK06483 199 ------LLK-IEPGEEEIIDLVDYLLT 218 (236)
T ss_pred ------ccc-cCCCHHHHHHHHHHHhc
Confidence 011 13468999999999886
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.8e-14 Score=125.84 Aligned_cols=207 Identities=14% Similarity=0.124 Sum_probs=130.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|+. |++++|++. .++++... ...++.++++|++
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~ 62 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGAR---VAVLERSAE------KLASLRQR------------FGDHVLVVEGDVT 62 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH------------hCCcceEEEccCC
Confidence 56789999999999999999999999987 888888743 12222111 0146788999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc-----cc-------cHHHHHhhhHHHHHHHHHHHHhc--CCCc
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF-----DE-------HIKMAVKINVCGVQAMLQLAREM--KDLK 180 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-----~~-------~~~~~~~~N~~~~~~ll~~a~~~--~~~~ 180 (303)
+.+ .+..++ ..+|++||+||.... .. .+...+++|+.++..+++.+.+. ....
T Consensus 63 ~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g 136 (263)
T PRK06200 63 SYA------DNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGG 136 (263)
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCC
Confidence 876 344433 368999999997431 11 14567789999988888887653 1235
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecceecCccChHHHHH---HH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGWIDNVYGPIGMLV---GI 252 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~~~~~~g~~~~~~---~~ 252 (303)
++|++||..+... ......|..+|...+.+.+.++..+ . +.+.||++.+.+....... ..
T Consensus 137 ~iv~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~ 204 (263)
T PRK06200 137 SMIFTLSNSSFYP------------GGGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETS 204 (263)
T ss_pred EEEEECChhhcCC------------CCCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcc
Confidence 8999999855421 1123357777777777777665443 2 6777997754432110000 00
Q ss_pred Hhhh--hhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 253 ATGV--LHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 253 ~~~~--~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.... ............-+...+|+|++++.++...
T Consensus 205 ~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~ 241 (263)
T PRK06200 205 ISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRR 241 (263)
T ss_pred cccccchhHHhhcCCCCCCCCCHHHHhhhhhheeccc
Confidence 0000 0000000011123678899999999988754
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.3e-14 Score=125.23 Aligned_cols=207 Identities=14% Similarity=0.151 Sum_probs=130.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||.++++.|++.|++ |++++|+.. .++++... ...++.++.+|++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~l~~~------------~~~~~~~~~~D~~ 61 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGAR---VAVLDKSAA------GLQELEAA------------HGDAVVGVEGDVR 61 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHhh------------cCCceEEEEeccC
Confidence 46789999999999999999999999997 888888643 22222110 0146788999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------c-----ccHHHHHhhhHHHHHHHHHHHHhc--CCCc
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------D-----EHIKMAVKINVCGVQAMLQLAREM--KDLK 180 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~-----~~~~~~~~~N~~~~~~ll~~a~~~--~~~~ 180 (303)
+.+ ++..++ ..+|++|||||.... . ..+...+++|+.++..+++++.+. ....
T Consensus 62 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g 135 (262)
T TIGR03325 62 SLD------DHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRG 135 (262)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCC
Confidence 865 333333 368999999996321 1 135678899999999999888764 1225
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc-----EEeecceecCccChHHHH--HH-H
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV-----HISGTGWIDNVYGPIGML--VG-I 252 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~-----~ii~pg~~~~~~g~~~~~--~~-~ 252 (303)
++|++||..+... ......|..+|...+.+.+.++..+. +.+.||++.+........ .. .
T Consensus 136 ~iv~~sS~~~~~~------------~~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~ 203 (262)
T TIGR03325 136 SVIFTISNAGFYP------------NGGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKS 203 (262)
T ss_pred CEEEEeccceecC------------CCCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCcccccccccccc
Confidence 7999998854321 11233567777778888876655443 667799775543211000 00 0
Q ss_pred Hhhh-hhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 253 ATGV-LHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 253 ~~~~-~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.... .............+...+|+|++++.++.++
T Consensus 204 ~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~ 239 (262)
T TIGR03325 204 ISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRG 239 (262)
T ss_pred ccccchhhhhhhcCCCCCCCChHHhhhheeeeecCC
Confidence 0000 0000000001123567899999999888753
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.9e-14 Score=121.14 Aligned_cols=200 Identities=15% Similarity=0.080 Sum_probs=122.0
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEE-eCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLL-VRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~-~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
++++||||+|+||+++++.|++.|++ |++. .|+.. ...+...++.. ...++.++.+|+.|.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~---v~~~~~~~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~~d~ 63 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYT---VAVNYQQNLH--AAQEVVNLITQ-------------AGGKAFVLQADISDE 63 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCChH--HHHHHHHHHHh-------------CCCeEEEEEccCCCH
Confidence 68999999999999999999999987 6553 45422 11111111111 114678899999997
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc------CCCceE
Q psy17679 124 GLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM------KDLKAF 182 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~------~~~~r~ 182 (303)
+ ++..+++ ++|+|||++|.... ...+...+++|+.++..+++.+... +...+|
T Consensus 64 ~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~ 137 (247)
T PRK09730 64 N------QVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAI 137 (247)
T ss_pred H------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 7 4555444 57899999997422 1234567889999988777666543 123579
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccCh----HHHHHHH
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGP----IGMLVGI 252 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~----~~~~~~~ 252 (303)
|++||..+.... |. .+..|..+|...+.+.+.+...+ . ++++||++.+.... .......
T Consensus 138 v~~sS~~~~~~~----------~~-~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~ 206 (247)
T PRK09730 138 VNVSSAASRLGA----------PG-EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRV 206 (247)
T ss_pred EEECchhhccCC----------CC-cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHH
Confidence 999998543211 11 12236677777777766554332 2 67889876433210 1111111
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
... .+ .....+.+|+|++++.++.++.
T Consensus 207 ~~~----~~-----~~~~~~~~dva~~~~~~~~~~~ 233 (247)
T PRK09730 207 KSN----IP-----MQRGGQPEEVAQAIVWLLSDKA 233 (247)
T ss_pred Hhc----CC-----CCCCcCHHHHHHHHHhhcChhh
Confidence 111 11 0112478999999999887653
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.9e-14 Score=122.12 Aligned_cols=206 Identities=11% Similarity=0.083 Sum_probs=131.8
Q ss_pred cccCCcEEEEeCCcc-hhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 40 EFYRDKTIFLTGGTG-FMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 40 ~~~~~~~vlItGatG-~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
..+++++++||||+| .||+++++.|+++|+. |++.+|+.... .+..+++... . ...++.++.+
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~---V~~~~~~~~~~--~~~~~~~~~~---------~--~~~~~~~~~~ 76 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGAR---VVISDIHERRL--GETADELAAE---------L--GLGRVEAVVC 76 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCCE---EEEEeCCHHHH--HHHHHHHHHh---------c--CCceEEEEEc
Confidence 346679999999997 7999999999999987 88888864321 1111111110 0 0136788999
Q ss_pred cCCCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC-Cc
Q psy17679 119 DCSLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD-LK 180 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~-~~ 180 (303)
|+++.+ ++..++ ..+|++|||||.... ...+...+++|+.++..+++.+.+. .+ ..
T Consensus 77 Dl~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g 150 (262)
T PRK07831 77 DVTSEA------QVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGG 150 (262)
T ss_pred cCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc
Confidence 999876 444444 368999999996431 1345677889999998888777542 12 46
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccCh----HHHHH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGP----IGMLV 250 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~----~~~~~ 250 (303)
++|++||.++... ......|..+|...+.+.+.++..+ . ..+.||.+.+.... .....
T Consensus 151 ~iv~~ss~~~~~~------------~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~ 218 (262)
T PRK07831 151 VIVNNASVLGWRA------------QHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLD 218 (262)
T ss_pred EEEEeCchhhcCC------------CCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHH
Confidence 8999988865421 1234457778888888887765432 2 67889876544321 11111
Q ss_pred HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 251 GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+... .....+...+|+|+++++++....
T Consensus 219 ~~~~~---------~~~~r~~~p~~va~~~~~l~s~~~ 247 (262)
T PRK07831 219 ELAAR---------EAFGRAAEPWEVANVIAFLASDYS 247 (262)
T ss_pred HHHhc---------CCCCCCcCHHHHHHHHHHHcCchh
Confidence 11110 011235678999999999887553
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1e-13 Score=119.39 Aligned_cols=201 Identities=15% Similarity=0.075 Sum_probs=126.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++||||+|++|.++++.|++.|+. |++++|+..... +..+.+.. .....+.++.+|++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~---V~~~~r~~~~~~--~~~~~l~~------------~~~~~~~~~~~D~~ 66 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGAT---VILVARHQKKLE--KVYDAIVE------------AGHPEPFAIRFDLM 66 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCE---EEEEeCChHHHH--HHHHHHHH------------cCCCCcceEEeeec
Confidence 67789999999999999999999999986 889999753211 11111111 01135667889987
Q ss_pred CCCCCCCHH----HHHHHh-ccccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEE
Q psy17679 122 LPGLGLSET----DRATLV-KQVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHV 185 (303)
Q Consensus 122 d~~~~~~~~----~~~~~~-~~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~i 185 (303)
+... .+.. .+...+ ..+|+|||+||.... ...+...+++|+.++..+++.+.+. .+..++|++
T Consensus 67 ~~~~-~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ 145 (239)
T PRK08703 67 SAEE-KEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFV 145 (239)
T ss_pred ccch-HHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 6421 0001 111222 468999999996421 1234567889999988888777543 145799999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC-----c--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR-----V--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~-----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
||..+.. |......|..+|...+.+.+.++..+ . .++.||++.+.....
T Consensus 146 ss~~~~~------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~------------ 201 (239)
T PRK08703 146 GESHGET------------PKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK------------ 201 (239)
T ss_pred ecccccc------------CCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccc------------
Confidence 9975432 22233457777777788776654432 2 677788653332100
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
... +.....+...+|++..++.++..
T Consensus 202 ~~~--~~~~~~~~~~~~~~~~~~~~~~~ 227 (239)
T PRK08703 202 SHP--GEAKSERKSYGDVLPAFVWWASA 227 (239)
T ss_pred cCC--CCCccccCCHHHHHHHHHHHhCc
Confidence 001 11122457899999999998874
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.9e-14 Score=122.77 Aligned_cols=198 Identities=14% Similarity=0.126 Sum_probs=125.6
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+++||||+|+||+++++.|+++|++ |++++|++.. .++++.+ ....++.++.+|+++.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~---V~~~~r~~~~-----~~~~~~~------------~~~~~~~~~~~D~~~~~ 61 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTH---VISISRTENK-----ELTKLAE------------QYNSNLTFHSLDLQDVH 61 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCE---EEEEeCCchH-----HHHHHHh------------ccCCceEEEEecCCCHH
Confidence 68999999999999999999999987 8888987521 1222211 11257889999999976
Q ss_pred CCCCHHHHHHHhccc-----------cEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc----CCCce
Q psy17679 125 LGLSETDRATLVKQV-----------NIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM----KDLKA 181 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~-----------dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r 181 (303)
++.++++++ +++||++|.... ...+...+++|+.+...+++.+... ++.++
T Consensus 62 ------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 135 (251)
T PRK06924 62 ------ELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKR 135 (251)
T ss_pred ------HHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCce
Confidence 455555421 279999997432 1234567888998877666655432 23468
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC------c--EEeecceecCccChHHHHHHHH
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR------V--HISGTGWIDNVYGPIGMLVGIA 253 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~------~--~ii~pg~~~~~~g~~~~~~~~~ 253 (303)
||++||..+.. +......|..+|...+.+.+.+.... . ..+.||++.+.... ......
T Consensus 136 iv~~sS~~~~~------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~--~~~~~~ 201 (251)
T PRK06924 136 VINISSGAAKN------------PYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQA--QIRSSS 201 (251)
T ss_pred EEEecchhhcC------------CCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHH--HHHhcC
Confidence 99999986532 33345678888888888887664321 2 56678865332210 000000
Q ss_pred hh------hhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 254 TG------VLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 254 ~~------~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
.. ....... ...+..++|+|++++.++.+
T Consensus 202 ~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~l~~~ 236 (251)
T PRK06924 202 KEDFTNLDRFITLKE----EGKLLSPEYVAKALRNLLET 236 (251)
T ss_pred cccchHHHHHHHHhh----cCCcCCHHHHHHHHHHHHhc
Confidence 00 0000110 11257899999999999986
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.1e-14 Score=137.14 Aligned_cols=196 Identities=11% Similarity=0.056 Sum_probs=131.4
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
..+++|+++||||+|+||.++++.|++.|+. |++++|++... .+..+++.. ...++.++.+|
T Consensus 367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~-------------~~~~~~~~~~D 428 (657)
T PRK07201 367 GPLVGKVVLITGASSGIGRATAIKVAEAGAT---VFLVARNGEAL--DELVAEIRA-------------KGGTAHAYTCD 428 (657)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHHH--HHHHHHHHh-------------cCCcEEEEEec
Confidence 4567899999999999999999999999987 88999974321 111111111 12468899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc---------cccHHHHHhhhHHHHHHHHHHHHhc---CCCc
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF---------DEHIKMAVKINVCGVQAMLQLAREM---KDLK 180 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~---------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~ 180 (303)
+++.+ ++..+++ .+|++|||||.... ...+...+++|+.++..+++.+... .+..
T Consensus 429 v~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g 502 (657)
T PRK07201 429 LTDSA------AVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFG 502 (657)
T ss_pred CCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Confidence 99976 4554443 68999999996421 1245678899999988887766432 1567
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHh
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIAT 254 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~ 254 (303)
+||++||..+... ...+..|..+|...+.+.+.+...+ . +.+.||.+.+.+....
T Consensus 503 ~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~------- 563 (657)
T PRK07201 503 HVVNVSSIGVQTN------------APRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT------- 563 (657)
T ss_pred EEEEECChhhcCC------------CCCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc-------
Confidence 9999999965432 1234557788888888887665433 2 7888987654331100
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
..+ .....+..+++|+.++..+..
T Consensus 564 ----~~~----~~~~~~~~~~~a~~i~~~~~~ 587 (657)
T PRK07201 564 ----KRY----NNVPTISPEEAADMVVRAIVE 587 (657)
T ss_pred ----ccc----cCCCCCCHHHHHHHHHHHHHh
Confidence 000 012246788888888887654
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-13 Score=122.60 Aligned_cols=208 Identities=10% Similarity=0.034 Sum_probs=128.0
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc---cHHHHHHHHHHhHHHhhhhccCcCcCCceEEEE
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK---DIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVA 117 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~---~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~ 117 (303)
.+++|+++||||+++||+++++.|++.|+. |++++|+.... ...+.++++... +. ....++.++.
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~~---vii~~~~~~~~~~~~~~~~~~~~~~~-----l~----~~~~~~~~~~ 70 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGAR---VVVNDIGVGLDGSASGGSAAQAVVDE-----IV----AAGGEAVANG 70 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEeeCCccccccccchhHHHHHHHH-----HH----hcCCceEEEe
Confidence 367799999999999999999999999987 77777654100 000111111110 00 0124677889
Q ss_pred ecCCCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----C--
Q psy17679 118 GDCSLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----K-- 177 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~-- 177 (303)
+|+++.+ ++..++ ..+|++|||||.... ...+...+++|+.++..+++++.+. .
T Consensus 71 ~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ 144 (286)
T PRK07791 71 DDIADWD------GAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKA 144 (286)
T ss_pred CCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhccc
Confidence 9999976 333333 368999999997431 2345778999999998887776532 0
Q ss_pred ---CCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHH
Q psy17679 178 ---DLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGM 248 (303)
Q Consensus 178 ---~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~ 248 (303)
...+||++||..+... ......|..+|...+.+.+.++..+ . +.+.|| +.+.+... .
T Consensus 145 ~~~~~g~Iv~isS~~~~~~------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~-~ 210 (286)
T PRK07791 145 GRAVDARIINTSSGAGLQG------------SVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTET-V 210 (286)
T ss_pred CCCCCcEEEEeCchhhCcC------------CCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchh-h
Confidence 1258999999855421 1234457777777777777655443 2 677787 33322211 1
Q ss_pred HHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 249 LVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...... . . +.....+...+|+|+++++++...
T Consensus 211 ~~~~~~----~-~--~~~~~~~~~pedva~~~~~L~s~~ 242 (286)
T PRK07791 211 FAEMMA----K-P--EEGEFDAMAPENVSPLVVWLGSAE 242 (286)
T ss_pred HHHHHh----c-C--cccccCCCCHHHHHHHHHHHhCch
Confidence 111100 0 0 111123568999999999988754
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-13 Score=120.44 Aligned_cols=210 Identities=13% Similarity=0.079 Sum_probs=132.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+||||+|+||+.+++.|++.|++ .|++++|+.... .+..+.+.. ...++.++.+|++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~--~V~~~~r~~~~~--~~~~~~l~~-------------~~~~~~~~~~D~~ 66 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAA--GLVICGRNAEKG--EAQAAELEA-------------LGAKAVFVQADLS 66 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCC--eEEEEcCCHHHH--HHHHHHHHh-------------cCCeEEEEEccCC
Confidence 56789999999999999999999999875 377888864321 111111111 1246788999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~i 183 (303)
+.+ ++.++++ ++|++||++|.... ...+...+++|+.++..+++.+.+. +...++|
T Consensus 67 ~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv 140 (260)
T PRK06198 67 DVE------DCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIV 140 (260)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 876 4444443 58999999997532 2233567889999999998887653 1235799
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+... ......|..+|...+.+.+.+...+ . +.+.||++.+...... .....+..
T Consensus 141 ~~ss~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~ 206 (260)
T PRK06198 141 NIGSMSAHGG------------QPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRI--QREFHGAP 206 (260)
T ss_pred EECCcccccC------------CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhh--hhhccCCC
Confidence 9999865421 1123457777887888877654433 2 5677887644432110 00000000
Q ss_pred ---hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 ---HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ---~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..-.........+++.+|++++++.++....
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 240 (260)
T PRK06198 207 DDWLEKAAATQPFGRLLDPDEVARAVAFLLSDES 240 (260)
T ss_pred hHHHHHHhccCCccCCcCHHHHHHHHHHHcChhh
Confidence 0000011122346899999999999887553
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.2e-14 Score=122.86 Aligned_cols=206 Identities=10% Similarity=0.072 Sum_probs=130.4
Q ss_pred ccCCcEEEEeCCc--chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGGT--GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGat--G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+++|+++||||+ +.||.++++.|++.|+. |++..|+.. ..++++++... .....++++
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~---V~l~~r~~~---~~~~~~~l~~~-------------~~~~~~~~~ 67 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAE---LAFTYQGDA---LKKRVEPLAAE-------------LGAFVAGHC 67 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCE---EEEEcCchH---HHHHHHHHHHh-------------cCCceEEec
Confidence 4567899999997 89999999999999997 777777421 12333333221 023456899
Q ss_pred cCCCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc-CCC
Q psy17679 119 DCSLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM-KDL 179 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~ 179 (303)
|+++.+ ++..++ ..+|++|||||.... ...+...+++|+.++..+++.+.+. .+.
T Consensus 68 Dl~~~~------~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~ 141 (272)
T PRK08159 68 DVTDEA------SIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDG 141 (272)
T ss_pred CCCCHH------HHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 999976 344433 268999999997531 1245678899999999999887764 223
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHH-HHHHH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIG-MLVGI 252 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~-~~~~~ 252 (303)
.++|++||..+.. +...+..|..+|.....+.+.+...+. +.+.||++.+...... .....
T Consensus 142 g~Iv~iss~~~~~------------~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~ 209 (272)
T PRK08159 142 GSILTLTYYGAEK------------VMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYI 209 (272)
T ss_pred ceEEEEecccccc------------CCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHH
Confidence 6899999874431 222455677778777777776644432 6777987754321000 00000
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........ + ...+...+|+|+++++++....
T Consensus 210 ~~~~~~~~---p--~~r~~~peevA~~~~~L~s~~~ 240 (272)
T PRK08159 210 LKWNEYNA---P--LRRTVTIEEVGDSALYLLSDLS 240 (272)
T ss_pred HHHHHhCC---c--ccccCCHHHHHHHHHHHhCccc
Confidence 00000000 1 1125788999999999987543
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.8e-14 Score=121.08 Aligned_cols=203 Identities=13% Similarity=0.106 Sum_probs=124.6
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+++||||+|+||+++++.|++.|+. |++++|+... .+.+.+.... ...++.++.+|+++.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~---Vi~~~r~~~~---~~~~~~~~~~------------~~~~~~~~~~D~~~~ 62 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGAN---VVITGRTKEK---LEEAKLEIEQ------------FPGQVLTVQMDVRNP 62 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh------------cCCcEEEEEecCCCH
Confidence 478999999999999999999999986 8888887431 1112111110 014688999999987
Q ss_pred CCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceEEEE
Q psy17679 124 GLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAFVHV 185 (303)
Q Consensus 124 ~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~i~i 185 (303)
+ .+..++ ..+|++||++|.... ...+...+++|+.++..+++++.+. ....+||++
T Consensus 63 ~------~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~i 136 (252)
T PRK07677 63 E------DVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINM 136 (252)
T ss_pred H------HHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEE
Confidence 6 344433 368999999985321 2235678899999999999888542 124689999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhh----CcCCc---EEeecceecCccChHHHH--HHHHhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEM----TPNRV---HISGTGWIDNVYGPIGML--VGIATGV 256 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~----~~~~~---~ii~pg~~~~~~g~~~~~--~~~~~~~ 256 (303)
||.++.... .....|..+|...+.+.+.+ ...++ +.+.||.+.+........ .......
T Consensus 137 sS~~~~~~~------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~ 204 (252)
T PRK07677 137 VATYAWDAG------------PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRT 204 (252)
T ss_pred cChhhccCC------------CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHH
Confidence 999764321 11223455565566666543 33222 677898764211000000 0000000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
... .....+...+|+++++..++...
T Consensus 205 ~~~-----~~~~~~~~~~~va~~~~~l~~~~ 230 (252)
T PRK07677 205 IQS-----VPLGRLGTPEEIAGLAYFLLSDE 230 (252)
T ss_pred hcc-----CCCCCCCCHHHHHHHHHHHcCcc
Confidence 000 01123678899999998887654
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.1e-14 Score=135.57 Aligned_cols=204 Identities=11% Similarity=0.123 Sum_probs=134.1
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
...+|+++||||+|+||.++++.|+++|+. |++++|+.. .++++... ...++..+.+|+
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~ 324 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDR---LLIIDRDAE------GAKKLAEA------------LGDEHLSVQADI 324 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH------------hCCceeEEEccC
Confidence 346799999999999999999999999987 888888642 22222111 014566789999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVH 184 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~ 184 (303)
+|.+ ++..+++ .+|++|||||.... ...+...+++|+.++..+++.+... .+..+||+
T Consensus 325 ~~~~------~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~ 398 (520)
T PRK06484 325 TDEA------AVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVN 398 (520)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEE
Confidence 9976 4444443 58999999997521 1245678899999999998888764 23468999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH-HHHHhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML-VGIATGVL 257 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~-~~~~~~~~ 257 (303)
+||..+... ......|..+|...+.+.+.++..+ . +.+.||++.+........ ........
T Consensus 399 isS~~~~~~------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 466 (520)
T PRK06484 399 LGSIASLLA------------LPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSI 466 (520)
T ss_pred ECchhhcCC------------CCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHH
Confidence 999966432 2234567777888888877765443 2 678899775443211000 00000000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.... ....+...+|+|++++.++...
T Consensus 467 ~~~~----~~~~~~~~~dia~~~~~l~s~~ 492 (520)
T PRK06484 467 RRRI----PLGRLGDPEEVAEAIAFLASPA 492 (520)
T ss_pred HhcC----CCCCCcCHHHHHHHHHHHhCcc
Confidence 0000 0112568899999999988754
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.1e-13 Score=118.88 Aligned_cols=209 Identities=18% Similarity=0.125 Sum_probs=130.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++|||++|++|.++++.|++.|+. |++++|++... +.+.+.+.. ....++.++.+|++
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~---V~~~~r~~~~~---~~~~~~l~~-----------~~~~~~~~~~~D~~ 67 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGCH---LHLVARDADAL---EALAADLRA-----------AHGVDVAVHALDLS 67 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCE---EEEEeCCHHHH---HHHHHHHHh-----------hcCCceEEEEecCC
Confidence 46789999999999999999999999986 88899874311 111111110 01246788999999
Q ss_pred CCCCCCCHHHHHHHh---ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCC
Q psy17679 122 LPGLGLSETDRATLV---KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~~~~~~~~---~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~ 188 (303)
+.+ ++..++ .++|++|||+|.... ...+...+++|+.+...+++.+.+. .+..++|++||.
T Consensus 68 ~~~------~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 141 (259)
T PRK06125 68 SPE------AREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGA 141 (259)
T ss_pred CHH------HHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCc
Confidence 876 454444 479999999997431 2345677889999988888776432 134689999988
Q ss_pred cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHh---hh---
Q psy17679 189 FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIAT---GV--- 256 (303)
Q Consensus 189 ~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~---~~--- 256 (303)
.+.. +...|..|..+|...+.+.+.+.... . +.+.||.+.+..- ..+...... +.
T Consensus 142 ~~~~------------~~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~-~~~~~~~~~~~~~~~~~ 208 (259)
T PRK06125 142 AGEN------------PDADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRM-LTLLKGRARAELGDESR 208 (259)
T ss_pred cccC------------CCCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHH-HHHHHhhhhcccCCHHH
Confidence 5431 23345667778887777777664322 2 6777886643310 000000000 00
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
....... -....+..++|+|++++.++...
T Consensus 209 ~~~~~~~-~~~~~~~~~~~va~~~~~l~~~~ 238 (259)
T PRK06125 209 WQELLAG-LPLGRPATPEEVADLVAFLASPR 238 (259)
T ss_pred HHHHhcc-CCcCCCcCHHHHHHHHHHHcCch
Confidence 0000000 01123578999999999988644
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=8.1e-14 Score=121.79 Aligned_cols=205 Identities=13% Similarity=0.103 Sum_probs=126.3
Q ss_pred cCCcEEEEeCC--cchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGG--TGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGa--tG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+++|+++|||| ++.||+++++.|++.|+. |++..|... ..+.++++... ......+++|
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~---v~~~~~~~~---~~~~~~~~~~~-------------~~~~~~~~~D 64 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAE---LAFTYVVDK---LEERVRKMAAE-------------LDSELVFRCD 64 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCE---EEEEcCcHH---HHHHHHHHHhc-------------cCCceEEECC
Confidence 56789999997 679999999999999997 777666422 12233332211 0234578999
Q ss_pred CCCCCCCCCHHHHHHHh-------ccccEEEEcceeccc--------c----ccHHHHHhhhHHHHHHHHHHHHhc--CC
Q psy17679 120 CSLPGLGLSETDRATLV-------KQVNIVFHGAATVRF--------D----EHIKMAVKINVCGVQAMLQLAREM--KD 178 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~--------~----~~~~~~~~~N~~~~~~ll~~a~~~--~~ 178 (303)
++|.+ ++..++ .++|++|||||.... . ..+...+++|+.+...+.+.+.+. ..
T Consensus 65 v~~~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~ 138 (261)
T PRK08690 65 VASDD------EINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR 138 (261)
T ss_pred CCCHH------HHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc
Confidence 99977 444443 368999999997531 1 124556788988887777766542 12
Q ss_pred CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHH-HHH
Q psy17679 179 LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGM-LVG 251 (303)
Q Consensus 179 ~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~-~~~ 251 (303)
..+||++||..+.. +...+..|..+|...+.+.+.++.. .. +.+.||++.+....... ...
T Consensus 139 ~g~Iv~iss~~~~~------------~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~ 206 (261)
T PRK08690 139 NSAIVALSYLGAVR------------AIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGK 206 (261)
T ss_pred CcEEEEEccccccc------------CCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHH
Confidence 35899999885542 1223455667777777766655432 22 67779977554311100 000
Q ss_pred HHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 252 IATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......... ....+...+|+|+++++++....
T Consensus 207 ~~~~~~~~~-----p~~r~~~peevA~~v~~l~s~~~ 238 (261)
T PRK08690 207 LLGHVAAHN-----PLRRNVTIEEVGNTAAFLLSDLS 238 (261)
T ss_pred HHHHHhhcC-----CCCCCCCHHHHHHHHHHHhCccc
Confidence 011000011 11236789999999999988553
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.7e-13 Score=119.91 Aligned_cols=205 Identities=14% Similarity=0.126 Sum_probs=128.7
Q ss_pred cCCcEEEEeCCcc--hhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGTG--FMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGatG--~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+++|+++||||++ .||+++++.|++.|+. |++..|+.. ..+.++++... ...+.++.+|
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~---vil~~r~~~---~~~~~~~~~~~-------------~~~~~~~~~D 64 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAE---LAFTYQNDK---LKGRVEEFAAQ-------------LGSDIVLPCD 64 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCE---EEEEecchh---HHHHHHHHHhc-------------cCCceEeecC
Confidence 5678999999985 9999999999999987 777777521 12223332211 1345678999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc------------cccHHHHHhhhHHHHHHHHHHHHhc-CCC
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF------------DEHIKMAVKINVCGVQAMLQLAREM-KDL 179 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~------------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~ 179 (303)
++|.+ ++..+++ ++|++|||||.... ...+...+++|+.+...+.+.+... .+.
T Consensus 65 l~~~~------~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 138 (262)
T PRK07984 65 VAEDA------SIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG 138 (262)
T ss_pred CCCHH------HHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCC
Confidence 99977 4444442 58999999996421 1234567788999988887776543 123
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH-HHHHHH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI-GMLVGI 252 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~-~~~~~~ 252 (303)
.+||++||..+.. +...+..|..+|...+.+.+.++..+ . ..+.||++.+..... ......
T Consensus 139 g~Iv~iss~~~~~------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~ 206 (262)
T PRK07984 139 SALLTLSYLGAER------------AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKM 206 (262)
T ss_pred cEEEEEecCCCCC------------CCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHH
Confidence 5899999885432 22234567778887777777665433 2 677798775532110 000001
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........+ ...+...+|+++++++++....
T Consensus 207 ~~~~~~~~p-----~~r~~~pedva~~~~~L~s~~~ 237 (262)
T PRK07984 207 LAHCEAVTP-----IRRTVTIEDVGNSAAFLCSDLS 237 (262)
T ss_pred HHHHHHcCC-----CcCCCCHHHHHHHHHHHcCccc
Confidence 110000111 1235788999999999887543
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=9.7e-14 Score=124.12 Aligned_cols=204 Identities=17% Similarity=0.064 Sum_probs=128.2
Q ss_pred ccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 39 QEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 39 ~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
...+++|+++||||+|+||+++++.|++.|+. |++.+|.... ...+..+++.. ...++.++.+
T Consensus 7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~---Vv~~~~~~~~-~~~~~~~~i~~-------------~g~~~~~~~~ 69 (306)
T PRK07792 7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGAT---VVVNDVASAL-DASDVLDEIRA-------------AGAKAVAVAG 69 (306)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEecCCchh-HHHHHHHHHHh-------------cCCeEEEEeC
Confidence 34567899999999999999999999999987 7777775321 11111122211 1246888999
Q ss_pred cCCCCCCCCCHHHHHHHh------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---C-----
Q psy17679 119 DCSLPGLGLSETDRATLV------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---K----- 177 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~----- 177 (303)
|+++.+ .+..++ .++|++|||||.... ...+...+++|+.++..+++++... +
T Consensus 70 Dv~d~~------~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~ 143 (306)
T PRK07792 70 DISQRA------TADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAG 143 (306)
T ss_pred CCCCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccC
Confidence 999976 344433 468999999997542 2345678899999999998876532 0
Q ss_pred --CCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH
Q psy17679 178 --DLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML 249 (303)
Q Consensus 178 --~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~ 249 (303)
...+||++||..+.... .....|..+|...+.+.+.+...+ . +.+.||. .+...
T Consensus 144 ~~~~g~iv~isS~~~~~~~------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~----- 205 (306)
T PRK07792 144 GPVYGRIVNTSSEAGLVGP------------VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMT----- 205 (306)
T ss_pred CCCCcEEEEECCcccccCC------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchh-----
Confidence 12589999998554221 123357777877888777655432 2 5667863 11111
Q ss_pred HHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 250 VGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
........ ... ......+..+|++.++..++...
T Consensus 206 ~~~~~~~~-~~~---~~~~~~~~pe~va~~v~~L~s~~ 239 (306)
T PRK07792 206 ADVFGDAP-DVE---AGGIDPLSPEHVVPLVQFLASPA 239 (306)
T ss_pred hhhccccc-hhh---hhccCCCCHHHHHHHHHHHcCcc
Confidence 11111000 000 11123457899999998887653
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-13 Score=118.62 Aligned_cols=200 Identities=11% Similarity=0.056 Sum_probs=128.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++|+||||+|++|.++++.|++.|++ |++++|++.. .+.+.+.... ..++.++.+|+.
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~-------------~~~~~~~~~Dl~ 63 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQ---VCINSRNENK---LKRMKKTLSK-------------YGNIHYVVGDVS 63 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh-------------cCCeEEEECCCC
Confidence 45689999999999999999999999997 8899997532 1122111110 136788999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc-----cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeCC
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF-----DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-----~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS~ 188 (303)
+.+ .+..++ ..+|.+||+++.... ...+...++.|+.+...+++.+.+. ....+||++||.
T Consensus 64 ~~~------~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 137 (238)
T PRK05786 64 STE------SARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM 137 (238)
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 876 344433 357999999985322 1223456788988888887777654 123589999998
Q ss_pred cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhhhccC
Q psy17679 189 FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLHTHLI 262 (303)
Q Consensus 189 ~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~ 262 (303)
.+... +......|..+|...+.+.+.+...+ . ++++||++.+.+.+.... .. ..
T Consensus 138 ~~~~~-----------~~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~~----~~----~~- 197 (238)
T PRK05786 138 SGIYK-----------ASPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERNW----KK----LR- 197 (238)
T ss_pred hhccc-----------CCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhhh----hh----hc-
Confidence 54211 11233456677776666665554332 2 788898776544322110 00 00
Q ss_pred CCCccccceehhHHHHHHHHHHhhcc
Q psy17679 263 NLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 263 ~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....++...|++++++.++..+.
T Consensus 198 --~~~~~~~~~~~va~~~~~~~~~~~ 221 (238)
T PRK05786 198 --KLGDDMAPPEDFAKVIIWLLTDEA 221 (238)
T ss_pred --cccCCCCCHHHHHHHHHHHhcccc
Confidence 111235788999999999997543
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.5e-13 Score=120.04 Aligned_cols=205 Identities=13% Similarity=0.068 Sum_probs=128.3
Q ss_pred cCCcEEEEeCC--cchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGG--TGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGa--tG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+++|+++|||| ++.||.+++++|++.|+. |++..|.... .+.++++... .....++.+|
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~---v~~~~~~~~~---~~~~~~~~~~-------------~~~~~~~~~D 64 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAE---LAFTYVGDRF---KDRITEFAAE-------------FGSDLVFPCD 64 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCe---EEEEccchHH---HHHHHHHHHh-------------cCCcceeecc
Confidence 56789999996 679999999999999988 7666654211 2233322211 0123468899
Q ss_pred CCCCCCCCCHHHHHHHh-------ccccEEEEcceeccc------------cccHHHHHhhhHHHHHHHHHHHHhc-CCC
Q psy17679 120 CSLPGLGLSETDRATLV-------KQVNIVFHGAATVRF------------DEHIKMAVKINVCGVQAMLQLAREM-KDL 179 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~------------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~ 179 (303)
++|.+ ++.+++ ..+|++|||||.... ...+...+++|+.++..+.+++.+. .+.
T Consensus 65 v~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~ 138 (260)
T PRK06997 65 VASDE------QIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDD 138 (260)
T ss_pred CCCHH------HHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 99987 454444 368999999997421 1245668899999998888887764 233
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH-HHHHH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG-MLVGI 252 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~-~~~~~ 252 (303)
.++|++||..+.. +...+..|..+|.....+.+.++..+ . +.+.||++.+...... .....
T Consensus 139 g~Ii~iss~~~~~------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~ 206 (260)
T PRK06997 139 ASLLTLSYLGAER------------VVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKI 206 (260)
T ss_pred ceEEEEecccccc------------CCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhH
Confidence 6899999985532 12234457777777777776654432 2 6777998755321100 00000
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........ + ...+...+|+++++++++...+
T Consensus 207 ~~~~~~~~---p--~~r~~~pedva~~~~~l~s~~~ 237 (260)
T PRK06997 207 LDFVESNA---P--LRRNVTIEEVGNVAAFLLSDLA 237 (260)
T ss_pred HHHHHhcC---c--ccccCCHHHHHHHHHHHhCccc
Confidence 00000000 1 1235788999999999987543
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-13 Score=133.99 Aligned_cols=207 Identities=13% Similarity=0.062 Sum_probs=131.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+.+++++||||+|+||+++++.|.+.|++ |++++|+... .+.+.+... ....++.++.+|+
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~---v~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~Dv 373 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGAE---VVASDIDEAA---AERTAELIR------------AAGAVAHAYRVDV 373 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCeEEEEEcCC
Confidence 456789999999999999999999999997 8888997432 111111111 0124678999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC-CceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD-LKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~-~~r~ 182 (303)
+|.+ ++..+++ .+|++|||||.... ...+...+++|+.++.++++++... .+ ..+|
T Consensus 374 ~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~i 447 (582)
T PRK05855 374 SDAD------AMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHI 447 (582)
T ss_pred CCHH------HHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence 9977 4444443 58999999998532 2345678889999998888776432 12 3589
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHH-------
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGML------- 249 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~------- 249 (303)
|++||..+... ......|..+|...+.+.+.+... .. +.+.||.+.+.+-.....
T Consensus 448 v~~sS~~~~~~------------~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~ 515 (582)
T PRK05855 448 VNVASAAAYAP------------SRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAED 515 (582)
T ss_pred EEECChhhccC------------CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccch
Confidence 99999966432 123445777777777766655432 22 788899775432111000
Q ss_pred HHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 250 VGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...........+. ...+..+|+|++++.++..+.
T Consensus 516 ~~~~~~~~~~~~~-----~~~~~p~~va~~~~~~~~~~~ 549 (582)
T PRK05855 516 EARRRGRADKLYQ-----RRGYGPEKVAKAIVDAVKRNK 549 (582)
T ss_pred hhhHHhhhhhhcc-----ccCCCHHHHHHHHHHHHHcCC
Confidence 0000000001110 112467999999999998654
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2e-13 Score=119.20 Aligned_cols=205 Identities=11% Similarity=0.121 Sum_probs=127.2
Q ss_pred cCCcEEEEeCCcc--hhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGTG--FMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGatG--~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+++|+++||||++ .||+++++.|.+.|+. |++..|+.. ..+.++++... . ....++.+|
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~---v~~~~r~~~---~~~~~~~l~~~------------~-g~~~~~~~D 66 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAE---LWFTYQSEV---LEKRVKPLAEE------------I-GCNFVSELD 66 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCE---EEEEeCchH---HHHHHHHHHHh------------c-CCceEEEcc
Confidence 5678999999997 8999999999999987 777777521 12223333211 0 112357899
Q ss_pred CCCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc-CCCc
Q psy17679 120 CSLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM-KDLK 180 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~ 180 (303)
++|.+ ++..++ ..+|++|||||.... ...+...+++|+.+...+++.+.+. ....
T Consensus 67 v~~~~------~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G 140 (260)
T PRK06603 67 VTNPK------SISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGG 140 (260)
T ss_pred CCCHH------HHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCc
Confidence 99977 444443 368999999996421 1245678899999998888877543 1236
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChH-HHHHHHH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPI-GMLVGIA 253 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~-~~~~~~~ 253 (303)
+||++||..+.. +...+..|..+|...+.+.+.+...+. +.+.||++.+.+... .......
T Consensus 141 ~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~ 208 (260)
T PRK06603 141 SIVTLTYYGAEK------------VIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTML 208 (260)
T ss_pred eEEEEecCcccc------------CCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHH
Confidence 899999975432 122334566777777777766554332 677799775543110 0000000
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....... + ...+...+|+|+++++++....
T Consensus 209 ~~~~~~~---p--~~r~~~pedva~~~~~L~s~~~ 238 (260)
T PRK06603 209 KSHAATA---P--LKRNTTQEDVGGAAVYLFSELS 238 (260)
T ss_pred HHHHhcC---C--cCCCCCHHHHHHHHHHHhCccc
Confidence 0000001 1 1225788999999999987543
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-13 Score=119.87 Aligned_cols=202 Identities=15% Similarity=0.121 Sum_probs=125.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++||||+|+||..+++.|+++|+. |++++|++... .+..+++.. ...++.++.+|++
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~---vi~~~r~~~~~--~~~~~~~~~-------------~~~~~~~~~~D~~ 64 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAK---LALIDLNQEKL--EEAVAECGA-------------LGTEVRGYAANVT 64 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHh-------------cCCceEEEEcCCC
Confidence 45789999999999999999999999986 88888864321 111111110 1246788999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc----------------cccHHHHHhhhHHHHHHHHHHHHhc--
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF----------------DEHIKMAVKINVCGVQAMLQLAREM-- 176 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~----------------~~~~~~~~~~N~~~~~~ll~~a~~~-- 176 (303)
+.+ ++..++ ..+|+|||++|.... ...+...+++|+.++..+.+.+...
T Consensus 65 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~ 138 (253)
T PRK08217 65 DEE------DVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMI 138 (253)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 865 343333 257999999996321 1234567788999988776554432
Q ss_pred --CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHH
Q psy17679 177 --KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGM 248 (303)
Q Consensus 177 --~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~ 248 (303)
....+||++||....+. .....|..+|...+.+.+.+... .. +.++||++.+..... .
T Consensus 139 ~~~~~~~iv~~ss~~~~~~-------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~-~ 204 (253)
T PRK08217 139 ESGSKGVIINISSIARAGN-------------MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA-M 204 (253)
T ss_pred hcCCCeEEEEEccccccCC-------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc-c
Confidence 12357899988743221 12345777777777877766533 22 677898765433211 0
Q ss_pred HHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 249 LVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
....... +........+.+++|+|+++..++..
T Consensus 205 ~~~~~~~-----~~~~~~~~~~~~~~~~a~~~~~l~~~ 237 (253)
T PRK08217 205 KPEALER-----LEKMIPVGRLGEPEEIAHTVRFIIEN 237 (253)
T ss_pred CHHHHHH-----HHhcCCcCCCcCHHHHHHHHHHHHcC
Confidence 0111110 00011123467899999999998864
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.2e-13 Score=122.45 Aligned_cols=174 Identities=13% Similarity=0.116 Sum_probs=112.2
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.++.++||||+|+||++++++|.++|++ |++++|+++ +++++... + .... ...++..+.+|+++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~---Vil~~R~~~------~l~~~~~~-l----~~~~--~~~~~~~~~~Dl~~ 115 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLN---LVLVARNPD------KLKDVSDS-I----QSKY--SKTQIKTVVVDFSG 115 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCC---EEEEECCHH------HHHHHHHH-H----HHHC--CCcEEEEEEEECCC
Confidence 4689999999999999999999999987 889999753 22221111 0 0000 01357788899985
Q ss_pred CCCCCCHHHHHHHhc--cccEEEEcceeccc---------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCC
Q psy17679 123 PGLGLSETDRATLVK--QVNIVFHGAATVRF---------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTA 188 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~---------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~ 188 (303)
.. ......+.+.+. ++|++|||||.... ...+...+++|+.++..+.+++.+. ++..+||++||.
T Consensus 116 ~~-~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~ 194 (320)
T PLN02780 116 DI-DEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSG 194 (320)
T ss_pred Cc-HHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEech
Confidence 21 001112333334 35699999997421 1224568899999999888887642 256799999998
Q ss_pred cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCcc
Q psy17679 189 FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVY 243 (303)
Q Consensus 189 ~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~ 243 (303)
.+.... +......|..+|...+.+.+.+...+ . +.+.||++.+.+
T Consensus 195 a~~~~~----------~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~ 245 (320)
T PLN02780 195 AAIVIP----------SDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKM 245 (320)
T ss_pred hhccCC----------CCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCc
Confidence 653210 11234567788887887777665433 2 678898775443
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.8e-13 Score=116.60 Aligned_cols=184 Identities=15% Similarity=0.130 Sum_probs=123.1
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+++++||||+|++|+++++.|++.|++ |++++|+... ++++.. .++.++.+|+++.
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~---v~~~~r~~~~------~~~~~~---------------~~~~~~~~D~~~~ 56 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWR---VIATARDAAA------LAALQA---------------LGAEALALDVADP 56 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCE---EEEEECCHHH------HHHHHh---------------ccceEEEecCCCH
Confidence 368999999999999999999999987 8888887432 111111 2456899999997
Q ss_pred CCCCCHHHHHHHh---c--cccEEEEcceeccc---------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEEeC
Q psy17679 124 GLGLSETDRATLV---K--QVNIVFHGAATVRF---------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVHVST 187 (303)
Q Consensus 124 ~~~~~~~~~~~~~---~--~~dvVi~~a~~~~~---------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~iSS 187 (303)
+ .+..+. . .+|+|||++|.... ...+...+++|+.++..+++++.+. ....+++++||
T Consensus 57 ~------~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS 130 (222)
T PRK06953 57 A------SVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSS 130 (222)
T ss_pred H------HHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcC
Confidence 6 444432 2 58999999997521 2235678899999999999888753 12357999998
Q ss_pred CcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc----EEeecceecCccChHHHHHHHHhhhhhhccCC
Q psy17679 188 AFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV----HISGTGWIDNVYGPIGMLVGIATGVLHTHLIN 263 (303)
Q Consensus 188 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~----~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (303)
..+..... +..+...|..+|...+.+++.+...+. +.+.||++.+.... .
T Consensus 131 ~~~~~~~~---------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~-----------------~ 184 (222)
T PRK06953 131 RMGSIGDA---------TGTTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG-----------------A 184 (222)
T ss_pred cccccccc---------cCCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC-----------------C
Confidence 74432111 111112466777778888887765542 67778876544311 0
Q ss_pred CCccccceehhHHHHHHHHHHhhc
Q psy17679 264 LNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 264 ~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...+...+.++.++.++...
T Consensus 185 ----~~~~~~~~~~~~~~~~~~~~ 204 (222)
T PRK06953 185 ----QAALDPAQSVAGMRRVIAQA 204 (222)
T ss_pred ----CCCCCHHHHHHHHHHHHHhc
Confidence 11246677777777776644
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.7e-13 Score=134.58 Aligned_cols=211 Identities=14% Similarity=0.072 Sum_probs=130.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHH-HHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
.+++|+||||||+|+||++++++|++.|+. |++++|+... .+.+ +.+... .....+.++.+|
T Consensus 411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~---Vvi~~r~~~~---~~~~~~~l~~~-----------~~~~~~~~v~~D 473 (676)
T TIGR02632 411 TLARRVAFVTGGAGGIGRETARRLAAEGAH---VVLADLNLEA---AEAVAAEINGQ-----------FGAGRAVALKMD 473 (676)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCE---EEEEeCCHHH---HHHHHHHHHhh-----------cCCCcEEEEECC
Confidence 356799999999999999999999999987 8888886432 1111 111100 001356789999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCce
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKA 181 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r 181 (303)
+++.+ ++..+++ ++|+||||||.... ...+...+++|+.+...+.+.+. ..+...+
T Consensus 474 vtd~~------~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~ 547 (676)
T TIGR02632 474 VTDEQ------AVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGN 547 (676)
T ss_pred CCCHH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 99976 5555554 68999999997532 12356677889888777665443 2212358
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceec---CccChHHHHHHH
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWID---NVYGPIGMLVGI 252 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~---~~~g~~~~~~~~ 252 (303)
||++||..+.. +......|..+|...+.+.+.++..+. +.+.||.+. ..+... +....
T Consensus 548 IV~iSS~~a~~------------~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~-~~~~~ 614 (676)
T TIGR02632 548 IVFIASKNAVY------------AGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGE-WREER 614 (676)
T ss_pred EEEEeChhhcC------------CCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCccccccc-chhhh
Confidence 99999985432 122345688888888888887654432 667787552 121110 10000
Q ss_pred H--hh----hhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 253 A--TG----VLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 253 ~--~~----~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
. .+ .....+........+++.+|+|++++.++...
T Consensus 615 ~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s~~ 655 (676)
T TIGR02632 615 AAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLASSK 655 (676)
T ss_pred hhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCc
Confidence 0 00 00011111222334689999999999987644
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.1e-13 Score=119.94 Aligned_cols=215 Identities=11% Similarity=0.101 Sum_probs=126.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc-------cHHHHHHHHHHhHHHhhhhccCcCcCCce
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK-------DIQERLDAIFEDRLFWRLRAEVPDFRSKV 113 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~-------~~~~~l~~l~~~~~~~~~~~~~~~~~~~v 113 (303)
.+++|+++||||+++||.++++.|++.|+. |++++|+.... ...+.+.+.... ...++
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~---Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~------------~~~~~ 69 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAGAT---VYVTGRSTRARRSEYDRPETIEETAELVTA------------AGGRG 69 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEecccccccccccccchHHHHHHHHHh------------cCCce
Confidence 467899999999999999999999999987 88888874311 111112111110 01357
Q ss_pred EEEEecCCCCCCCCCHHHHHHHh-------ccccEEEEcc-eecc-------c----cccHHHHHhhhHHHHHHHHHHHH
Q psy17679 114 SAVAGDCSLPGLGLSETDRATLV-------KQVNIVFHGA-ATVR-------F----DEHIKMAVKINVCGVQAMLQLAR 174 (303)
Q Consensus 114 ~~~~~Dl~d~~~~~~~~~~~~~~-------~~~dvVi~~a-~~~~-------~----~~~~~~~~~~N~~~~~~ll~~a~ 174 (303)
.++.+|+++.+ ++..++ ..+|++|||| |... . ...+...+++|+.+...+.+++.
T Consensus 70 ~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l 143 (305)
T PRK08303 70 IAVQVDHLVPE------QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFAL 143 (305)
T ss_pred EEEEcCCCCHH------HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 78999999976 444443 3689999999 6321 1 12245577889998888777765
Q ss_pred hc---CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccCh
Q psy17679 175 EM---KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGP 245 (303)
Q Consensus 175 ~~---~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~ 245 (303)
+. ++..+||++||..+.... .+...+..|..+|.....+.+.++..+ . +.+.||++.+....
T Consensus 144 p~m~~~~~g~IV~isS~~~~~~~---------~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~ 214 (305)
T PRK08303 144 PLLIRRPGGLVVEITDGTAEYNA---------THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMML 214 (305)
T ss_pred HHhhhCCCcEEEEECCccccccC---------cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHH
Confidence 43 134689999996432110 011123346677777777766554433 2 56779877543311
Q ss_pred HHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 246 IGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
... . .................-+...+|+|++++.++..+
T Consensus 215 ~~~-~-~~~~~~~~~~~~~p~~~~~~~peevA~~v~fL~s~~ 254 (305)
T PRK08303 215 DAF-G-VTEENWRDALAKEPHFAISETPRYVGRAVAALAADP 254 (305)
T ss_pred Hhh-c-cCccchhhhhccccccccCCCHHHHHHHHHHHHcCc
Confidence 100 0 000000000000000112346899999999998765
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.7e-13 Score=116.36 Aligned_cols=194 Identities=13% Similarity=0.103 Sum_probs=124.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|+||||+|+||++++++|++.|+.+ .|....|+..... ...++.++++|+++.+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~-~v~~~~~~~~~~~-----------------------~~~~~~~~~~Dls~~~ 56 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDA-TVHATYRHHKPDF-----------------------QHDNVQWHALDVTDEA 56 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCC-EEEEEccCCcccc-----------------------ccCceEEEEecCCCHH
Confidence 589999999999999999999986543 3655566432110 0257889999999876
Q ss_pred CCCCHHHHHHHhccccEEEEcceecccc-------------ccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRFD-------------EHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~~-------------~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~ 188 (303)
+...+.+.+.++|+||||||..... ..+...+++|+.+...+++.+.+. .+..+++++||.
T Consensus 57 ---~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~ 133 (235)
T PRK09009 57 ---EIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAK 133 (235)
T ss_pred ---HHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeec
Confidence 1112333445899999999985321 123467888999988888777653 134689999986
Q ss_pred cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC------Cc--EEeecceecCccChHHHHHHHHhhhhhhc
Q psy17679 189 FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN------RV--HISGTGWIDNVYGPIGMLVGIATGVLHTH 260 (303)
Q Consensus 189 ~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~------~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~ 260 (303)
.+.... .+...+..|..+|...+.+.+.+... .. ..+.||++.+..... ... .
T Consensus 134 ~~~~~~---------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~-----~~~----~- 194 (235)
T PRK09009 134 VGSISD---------NRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP-----FQQ----N- 194 (235)
T ss_pred cccccc---------CCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc-----hhh----c-
Confidence 442211 11223445667777777777765532 12 567798775544221 000 0
Q ss_pred cCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 261 LINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 261 ~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....++..+|+|++++.++..+.
T Consensus 195 ----~~~~~~~~~~~~a~~~~~l~~~~~ 218 (235)
T PRK09009 195 ----VPKGKLFTPEYVAQCLLGIIANAT 218 (235)
T ss_pred ----cccCCCCCHHHHHHHHHHHHHcCC
Confidence 011225789999999999998764
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=9e-14 Score=122.12 Aligned_cols=206 Identities=13% Similarity=0.078 Sum_probs=120.6
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+++||||+|+||.++++.|++.|+. |++++|+.+.. .+..+++.. .....+.++.+|+++.+
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~---vv~~~r~~~~~--~~~~~~~~~------------~~~~~~~~~~~D~~~~~ 63 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAE---LFLTDRDADGL--AQTVADARA------------LGGTVPEHRALDISDYD 63 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHh------------cCCCcceEEEeeCCCHH
Confidence 57999999999999999999999987 88888864311 111111110 00123456789999876
Q ss_pred CCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceEEEEe
Q psy17679 125 LGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAFVHVS 186 (303)
Q Consensus 125 ~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~i~iS 186 (303)
++..++ .++|+|||++|.... ...+...+++|+.++..+++++... +...+||++|
T Consensus 64 ------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~is 137 (272)
T PRK07832 64 ------AVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVS 137 (272)
T ss_pred ------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEc
Confidence 333333 358999999996432 2234678899999999999887532 1346899999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhC----cCCc--EEeecceecCccChHHHHHHH--Hhhhhh
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMT----PNRV--HISGTGWIDNVYGPIGMLVGI--ATGVLH 258 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~----~~~~--~ii~pg~~~~~~g~~~~~~~~--~~~~~~ 258 (303)
|..+... ......|..+|...+.+.+.+. .... +++.||.+.+........... ......
T Consensus 138 S~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 205 (272)
T PRK07832 138 SAAGLVA------------LPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQ 205 (272)
T ss_pred cccccCC------------CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHH
Confidence 9854321 1122334555554444444333 2222 788898764332111000000 000000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.... ......+..+|+|++++.++..+
T Consensus 206 ~~~~--~~~~~~~~~~~vA~~~~~~~~~~ 232 (272)
T PRK07832 206 KWVD--RFRGHAVTPEKAAEKILAGVEKN 232 (272)
T ss_pred HHHH--hcccCCCCHHHHHHHHHHHHhcC
Confidence 0000 01123579999999999999644
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.5e-13 Score=115.87 Aligned_cols=200 Identities=12% Similarity=0.042 Sum_probs=123.8
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLG 126 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~ 126 (303)
|+||||+|+||.++++.|+++|++ |++++|..... ..+..+++.. ...++.++.+|+++.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~---v~~~~~~~~~~-~~~~~~~l~~-------------~~~~~~~~~~Dl~~~~-- 61 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFE---ICVHYHSGRSD-AESVVSAIQA-------------QGGNARLLQFDVADRV-- 61 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCCHHH-HHHHHHHHHH-------------cCCeEEEEEccCCCHH--
Confidence 689999999999999999999987 77887754311 1111111111 1246889999999976
Q ss_pred CCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEEEEeCC
Q psy17679 127 LSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFVHVSTA 188 (303)
Q Consensus 127 ~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i~iSS~ 188 (303)
++..+++ .+|++||++|.... ...+...+++|+.++..+++.+. +..+..+||++||.
T Consensus 62 ----~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~ 137 (239)
T TIGR01831 62 ----ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASV 137 (239)
T ss_pred ----HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcch
Confidence 4444333 57999999996431 23456788999999988887653 11145689999998
Q ss_pred cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhhhhccC
Q psy17679 189 FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVLHTHLI 262 (303)
Q Consensus 189 ~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~ 262 (303)
.+.... .....|..+|...+.+.+.+... .. +.+.||++.+...... .. ........++
T Consensus 138 ~~~~~~------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~-~~~~~~~~~~- 202 (239)
T TIGR01831 138 SGVMGN------------RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEV-EH-DLDEALKTVP- 202 (239)
T ss_pred hhccCC------------CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhh-hH-HHHHHHhcCC-
Confidence 543211 12234556666666555554333 22 6778987754443211 11 1111111111
Q ss_pred CCCccccceehhHHHHHHHHHHhhcc
Q psy17679 263 NLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 263 ~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...+...+|+++++++++..+.
T Consensus 203 ----~~~~~~~~~va~~~~~l~~~~~ 224 (239)
T TIGR01831 203 ----MNRMGQPAEVASLAGFLMSDGA 224 (239)
T ss_pred ----CCCCCCHHHHHHHHHHHcCchh
Confidence 1125678999999999988653
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.6e-13 Score=126.05 Aligned_cols=202 Identities=17% Similarity=0.129 Sum_probs=126.7
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
..+++++++||||+|+||..+++.|.+.|++ |++++|+.. .+.++++... .+..++.+|
T Consensus 206 ~~~~g~~vlItGasggIG~~la~~l~~~Ga~---vi~~~~~~~----~~~l~~~~~~--------------~~~~~~~~D 264 (450)
T PRK08261 206 RPLAGKVALVTGAARGIGAAIAEVLARDGAH---VVCLDVPAA----GEALAAVANR--------------VGGTALALD 264 (450)
T ss_pred cCCCCCEEEEecCCCHHHHHHHHHHHHCCCE---EEEEeCCcc----HHHHHHHHHH--------------cCCeEEEEe
Confidence 3457799999999999999999999999987 888887532 1222222111 234578899
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceE
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAF 182 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~ 182 (303)
+++.+ ++..+++ .+|+|||+||.... ...+...+++|+.++.++.+++... ....+|
T Consensus 265 v~~~~------~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~i 338 (450)
T PRK08261 265 ITAPD------APARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRI 338 (450)
T ss_pred CCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEE
Confidence 99876 3444333 58999999997532 2345678899999999999998763 123689
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhC----cCCc--EEeecceecCccChHH-HHHHHHhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMT----PNRV--HISGTGWIDNVYGPIG-MLVGIATG 255 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~----~~~~--~ii~pg~~~~~~g~~~-~~~~~~~~ 255 (303)
|++||..+.... .....|..+|...+.+.+.+. .... +.+.||.+.+...... ....-...
T Consensus 339 v~~SS~~~~~g~------------~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~ 406 (450)
T PRK08261 339 VGVSSISGIAGN------------RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGR 406 (450)
T ss_pred EEECChhhcCCC------------CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHh
Confidence 999998654221 123456677765555555443 2222 6777987654322110 00000000
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.. ..+ .......|+|+++++++...
T Consensus 407 ~~-~~l------~~~~~p~dva~~~~~l~s~~ 431 (450)
T PRK08261 407 RM-NSL------QQGGLPVDVAETIAWLASPA 431 (450)
T ss_pred hc-CCc------CCCCCHHHHHHHHHHHhChh
Confidence 00 001 11234579999999988643
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.8e-14 Score=112.62 Aligned_cols=150 Identities=15% Similarity=0.191 Sum_probs=111.0
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+++||||++.||+.+++.|+++|.. .|+++.|+++.....+..+++... ..++.++++|+++.+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~--~v~~~~r~~~~~~~~~l~~~l~~~-------------~~~~~~~~~D~~~~~ 65 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGAR--VVILTSRSEDSEGAQELIQELKAP-------------GAKITFIECDLSDPE 65 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTE--EEEEEESSCHHHHHHHHHHHHHHT-------------TSEEEEEESETTSHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCce--EEEEeeeccccccccccccccccc-------------ccccccccccccccc
Confidence 68999999999999999999999553 388888872211122222222211 268899999999876
Q ss_pred CCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy17679 125 LGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFT 190 (303)
Q Consensus 125 ~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~ 190 (303)
++..+++ .+|++|||+|.... ...+...+++|+.+...+.+++... +..+||++||..+
T Consensus 66 ------~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~g~iv~~sS~~~ 138 (167)
T PF00106_consen 66 ------SIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ-GGGKIVNISSIAG 138 (167)
T ss_dssp ------HHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH-TTEEEEEEEEGGG
T ss_pred ------cccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheec-cccceEEecchhh
Confidence 4444443 78999999998652 2345678899999999999999884 7889999999966
Q ss_pred cCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCc
Q psy17679 191 HCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTP 228 (303)
Q Consensus 191 ~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~ 228 (303)
.. |......|..+|...+.+.+.+..
T Consensus 139 ~~------------~~~~~~~Y~askaal~~~~~~la~ 164 (167)
T PF00106_consen 139 VR------------GSPGMSAYSASKAALRGLTQSLAA 164 (167)
T ss_dssp TS------------SSTTBHHHHHHHHHHHHHHHHHHH
T ss_pred cc------------CCCCChhHHHHHHHHHHHHHHHHH
Confidence 53 344566788888888888887654
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.8e-13 Score=117.18 Aligned_cols=204 Identities=10% Similarity=0.048 Sum_probs=127.6
Q ss_pred cCCcEEEEeCC--cchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGG--TGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGa--tG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+++|+++|||| ++.||.++++.|++.|+. |++.+|+... +.++++... ...++.++.+|
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~---v~l~~r~~~~----~~~~~~~~~------------~~~~~~~~~~D 65 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAE---VVLTGFGRAL----RLTERIAKR------------LPEPAPVLELD 65 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCE---EEEecCccch----hHHHHHHHh------------cCCCCcEEeCC
Confidence 56789999999 899999999999999987 8888876421 111221110 01356789999
Q ss_pred CCCCCCCCCHHHHHHHh-------ccccEEEEcceeccc--------c---ccHHHHHhhhHHHHHHHHHHHHhc-CCCc
Q psy17679 120 CSLPGLGLSETDRATLV-------KQVNIVFHGAATVRF--------D---EHIKMAVKINVCGVQAMLQLAREM-KDLK 180 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~--------~---~~~~~~~~~N~~~~~~ll~~a~~~-~~~~ 180 (303)
++|.+ ++..++ .++|++|||||.... . ..+...+++|+.++..+.+.+.+. ....
T Consensus 66 v~~~~------~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g 139 (256)
T PRK07889 66 VTNEE------HLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGG 139 (256)
T ss_pred CCCHH------HHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCc
Confidence 99976 344333 368999999997521 1 233557899999998888877653 1235
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHH-HHHHH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGM-LVGIA 253 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~-~~~~~ 253 (303)
++|++|+.... +...|..|..+|.....+.+.+...+ . +.+.||++.+....... .....
T Consensus 140 ~Iv~is~~~~~-------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~ 206 (256)
T PRK07889 140 SIVGLDFDATV-------------AWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLE 206 (256)
T ss_pred eEEEEeecccc-------------cCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHH
Confidence 78988864211 12245567777777777776654433 2 67779977553211000 00000
Q ss_pred hhhhhhccCC-CCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLIN-LNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~-~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+.. ....+.+...+|+|++++.++....
T Consensus 207 -----~~~~~~~p~~~~~~~p~evA~~v~~l~s~~~ 237 (256)
T PRK07889 207 -----EGWDERAPLGWDVKDPTPVARAVVALLSDWF 237 (256)
T ss_pred -----HHHHhcCccccccCCHHHHHHHHHHHhCccc
Confidence 00000 0111135789999999999987543
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.9e-13 Score=116.65 Aligned_cols=205 Identities=10% Similarity=0.048 Sum_probs=123.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
+.++||||+|+||+++++.|+++|++ |+++.|.... ..+.+.+.+.. ....++.++.+|++|.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~---V~~~~~~~~~--~~~~~~~~l~~-----------~~~~~~~~~~~Dv~d~~ 65 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYR---VVLHYHRSAA--AASTLAAELNA-----------RRPNSAVTCQADLSNSA 65 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCe---EEEEcCCcHH--HHHHHHHHHHh-----------ccCCceEEEEccCCCch
Confidence 47999999999999999999999997 7777664321 11111111110 00135667899999976
Q ss_pred CCCCHHHHHHH-------hccccEEEEcceeccc------c-c-----------cHHHHHhhhHHHHHHHHHHHHhcC--
Q psy17679 125 LGLSETDRATL-------VKQVNIVFHGAATVRF------D-E-----------HIKMAVKINVCGVQAMLQLAREMK-- 177 (303)
Q Consensus 125 ~~~~~~~~~~~-------~~~~dvVi~~a~~~~~------~-~-----------~~~~~~~~N~~~~~~ll~~a~~~~-- 177 (303)
.- ...+..+ +.++|+||||||.... . . .+...+++|+.++..+++.+....
T Consensus 66 ~~--~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 143 (267)
T TIGR02685 66 TL--FSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAG 143 (267)
T ss_pred hh--HHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhh
Confidence 10 0011222 2369999999996321 1 1 245678999999988887764330
Q ss_pred -------CCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccC
Q psy17679 178 -------DLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYG 244 (303)
Q Consensus 178 -------~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g 244 (303)
...++|++||..+.. |......|..+|...+.+.+.+...+ . +.+.||++.....
T Consensus 144 ~~~~~~~~~~~iv~~~s~~~~~------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~ 211 (267)
T TIGR02685 144 TRAEQRSTNLSIVNLCDAMTDQ------------PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDA 211 (267)
T ss_pred cccccCCCCeEEEEehhhhccC------------CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccc
Confidence 123678887774431 23344567788888888888765443 2 7888997632211
Q ss_pred -hHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 245 -PIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+......+.. ..+ ....+...+|++++++.++..+
T Consensus 212 ~~~~~~~~~~~----~~~----~~~~~~~~~~va~~~~~l~~~~ 247 (267)
T TIGR02685 212 MPFEVQEDYRR----KVP----LGQREASAEQIADVVIFLVSPK 247 (267)
T ss_pred cchhHHHHHHH----hCC----CCcCCCCHHHHHHHHHHHhCcc
Confidence 1111111111 111 1112468899999999988754
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.6e-13 Score=114.93 Aligned_cols=181 Identities=12% Similarity=0.088 Sum_probs=121.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+++||||+|+||+++++.|.++|++ |++++|+.. +++++... .++.++++|+++.+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~---v~~~~r~~~------~~~~~~~~--------------~~~~~~~~D~~~~~ 57 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHK---VTLVGARRD------DLEVAAKE--------------LDVDAIVCDNTDPA 57 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHh--------------ccCcEEecCCCCHH
Confidence 47999999999999999999999987 888888642 22222111 24568899999876
Q ss_pred CCCCHHHHHHHhc----cccEEEEcceecc---------c---cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeC
Q psy17679 125 LGLSETDRATLVK----QVNIVFHGAATVR---------F---DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVST 187 (303)
Q Consensus 125 ~~~~~~~~~~~~~----~~dvVi~~a~~~~---------~---~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS 187 (303)
++..+++ .+|++|||+|... . ...+...+++|+.++..+++++.+. ....+||++||
T Consensus 58 ------~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS 131 (223)
T PRK05884 58 ------SLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVP 131 (223)
T ss_pred ------HHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEec
Confidence 4555544 6899999998421 1 2345678899999999999888763 12368999998
Q ss_pred CcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHhhhhhhcc
Q psy17679 188 AFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIATGVLHTHL 261 (303)
Q Consensus 188 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~ 261 (303)
... + ....|..+|...+.+.+.+...+. +.+.||++.+.. .. ... .
T Consensus 132 ~~~--------------~--~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~-----~~----~~~-~-- 183 (223)
T PRK05884 132 ENP--------------P--AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPG-----YD----GLS-R-- 183 (223)
T ss_pred CCC--------------C--CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchh-----hh----hcc-C--
Confidence 641 0 123466777777777766654332 677798764321 00 000 0
Q ss_pred CCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 262 INLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 262 ~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. +.-..+|+++++.+++...+
T Consensus 184 -~-----p~~~~~~ia~~~~~l~s~~~ 204 (223)
T PRK05884 184 -T-----PPPVAAEIARLALFLTTPAA 204 (223)
T ss_pred -C-----CCCCHHHHHHHHHHHcCchh
Confidence 0 11267999999999877543
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.3e-13 Score=114.28 Aligned_cols=107 Identities=17% Similarity=0.233 Sum_probs=80.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++++++||||+|+||+++++.|+++|++ |++++|+.... .+... . ....++.+|+
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~---Vi~~~r~~~~~-----~~~~~-------------~--~~~~~~~~D~ 67 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAK---VIGLTHSKINN-----SESND-------------E--SPNEWIKWEC 67 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCE---EEEEECCchhh-----hhhhc-------------c--CCCeEEEeeC
Confidence 467799999999999999999999999987 88888865211 10000 0 1125678999
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceeccc----cccHHHHHhhhHHHHHHHHHHHHhc
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVRF----DEHIKMAVKINVCGVQAMLQLAREM 176 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~----~~~~~~~~~~N~~~~~~ll~~a~~~ 176 (303)
++.+ ++...+.++|++|||||.... ...+...+++|+.++.++++.+.+.
T Consensus 68 ~~~~------~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 121 (245)
T PRK12367 68 GKEE------SLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDI 121 (245)
T ss_pred CCHH------HHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 9876 677777899999999997432 2345778899999999999887653
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.51 E-value=9.1e-13 Score=121.18 Aligned_cols=185 Identities=15% Similarity=0.167 Sum_probs=117.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||++++++|.+.|++ |++++|++.. +++.... ....+..+.+|++
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~---Vi~l~r~~~~------l~~~~~~------------~~~~v~~v~~Dvs 234 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAK---VVALTSNSDK------ITLEING------------EDLPVKTLHWQVG 234 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHHH------HHHHHhh------------cCCCeEEEEeeCC
Confidence 56789999999999999999999999987 8888886421 1111100 0124667889999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc----cccHHHHHhhhHHHHHHHHHHHHhc---CC---C-ceEEEEeCCcc
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF----DEHIKMAVKINVCGVQAMLQLAREM---KD---L-KAFVHVSTAFT 190 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~----~~~~~~~~~~N~~~~~~ll~~a~~~---~~---~-~r~i~iSS~~~ 190 (303)
|.+ ++.+.+.++|++|||||.... .+.+...+++|+.++.++++++.+. ++ . ..+|++|++.
T Consensus 235 d~~------~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~- 307 (406)
T PRK07424 235 QEA------ALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE- 307 (406)
T ss_pred CHH------HHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-
Confidence 876 677888899999999997432 2235678899999999999887643 11 1 2345554421
Q ss_pred cCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHHHHHHHHhhhhhhccCCCCcc
Q psy17679 191 HCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTV 267 (303)
Q Consensus 191 ~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 267 (303)
. .| .....|..+|.....+......... ..+.||.+.+.. ..
T Consensus 308 ~------------~~-~~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~----------------------~~ 352 (406)
T PRK07424 308 V------------NP-AFSPLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNL----------------------NP 352 (406)
T ss_pred c------------cC-CCchHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCC----------------------Cc
Confidence 1 11 1123577777766665432222212 333344221111 01
Q ss_pred ccceehhHHHHHHHHHHhhccc
Q psy17679 268 TDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 268 ~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
...+..+++|+.++.++..+..
T Consensus 353 ~~~~spe~vA~~il~~i~~~~~ 374 (406)
T PRK07424 353 IGVMSADWVAKQILKLAKRDFR 374 (406)
T ss_pred CCCCCHHHHHHHHHHHHHCCCC
Confidence 1246889999999998876654
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.8e-13 Score=107.62 Aligned_cols=159 Identities=19% Similarity=0.170 Sum_probs=108.9
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHH-HHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQER-LDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~-l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
++++||||+|++|.++++.|++.|.. .|+++.|++........ ++++.. ...++.++.+|+++.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~--~v~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~ 65 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGAR--HLVLLSRSGPDAPGAAELLAELEA-------------LGAEVTVVACDVADR 65 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCC--eEEEEeCCCCCCccHHHHHHHHHh-------------cCCeEEEEECCCCCH
Confidence 47999999999999999999999863 27778887543321111 111111 124677899999886
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy17679 124 GLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAF 189 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~ 189 (303)
. .+..++. .+|.|||+++.... ...+...+++|+.++..+++++... +.+++|++||..
T Consensus 66 ~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii~~ss~~ 138 (180)
T smart00822 66 A------ALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFVLFSSVA 138 (180)
T ss_pred H------HHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEEEEccHH
Confidence 5 3444433 47999999996432 1334667889999999999999776 778999999985
Q ss_pred ccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc--EEeecc
Q psy17679 190 THCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV--HISGTG 237 (303)
Q Consensus 190 ~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg 237 (303)
+... ...+..|..+|...+.+.+....... ..+.||
T Consensus 139 ~~~~------------~~~~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g 176 (180)
T smart00822 139 GVLG------------NPGQANYAAANAFLDALAAHRRARGLPATSINWG 176 (180)
T ss_pred HhcC------------CCCchhhHHHHHHHHHHHHHHHhcCCceEEEeec
Confidence 5321 12344567778888888876554443 455555
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.9e-13 Score=115.88 Aligned_cols=203 Identities=14% Similarity=0.090 Sum_probs=124.6
Q ss_pred EEEEeCCcchhHHHHHHHHHh----cCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLR----SCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~----~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
.++||||+++||.+++++|.+ .|+. |+++.|+.... .+..+++.. .. ...++.++.+|++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~---V~~~~r~~~~~--~~~~~~l~~---------~~--~~~~v~~~~~Dl~ 65 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSV---LVLSARNDEAL--RQLKAEIGA---------ER--SGLRVVRVSLDLG 65 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcE---EEEEEcCHHHH--HHHHHHHHh---------cC--CCceEEEEEeccC
Confidence 589999999999999999987 6776 88888874311 111111111 00 0146788999999
Q ss_pred CCCCCCCHHHHHHHhcc-----------ccEEEEcceeccc----------cccHHHHHhhhHHHHHHHHHHHHhc----
Q psy17679 122 LPGLGLSETDRATLVKQ-----------VNIVFHGAATVRF----------DEHIKMAVKINVCGVQAMLQLAREM---- 176 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~-----------~dvVi~~a~~~~~----------~~~~~~~~~~N~~~~~~ll~~a~~~---- 176 (303)
+.+ ++..+++. .|++|||||.... ...+...+++|+.++..+.+.+.+.
T Consensus 66 ~~~------~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~ 139 (256)
T TIGR01500 66 AEA------GLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDS 139 (256)
T ss_pred CHH------HHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhc
Confidence 876 44444431 2699999996421 1234578899999988887766543
Q ss_pred CC-CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH
Q psy17679 177 KD-LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML 249 (303)
Q Consensus 177 ~~-~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~ 249 (303)
++ ..+||++||..+.. |...+..|..+|...+.+.+.+...+ . +.+.||++.+.+......
T Consensus 140 ~~~~~~iv~isS~~~~~------------~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~ 207 (256)
T TIGR01500 140 PGLNRTVVNISSLCAIQ------------PFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVRE 207 (256)
T ss_pred CCCCCEEEEECCHHhCC------------CCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHH
Confidence 11 35899999986542 22234567788887888777654433 2 566798775543211000
Q ss_pred H---HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 250 V---GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 250 ~---~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
. .-......... ....+...+|+|++++.++.+
T Consensus 208 ~~~~~~~~~~~~~~~----~~~~~~~p~eva~~~~~l~~~ 243 (256)
T TIGR01500 208 ESVDPDMRKGLQELK----AKGKLVDPKVSAQKLLSLLEK 243 (256)
T ss_pred hcCChhHHHHHHHHH----hcCCCCCHHHHHHHHHHHHhc
Confidence 0 00000000000 011267899999999999853
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.1e-12 Score=108.17 Aligned_cols=178 Identities=13% Similarity=0.129 Sum_probs=115.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|..+.|+||||+.+||..|+++|++. ..+..++...|+++.+ .+.++.+- ...+++..++.|++
T Consensus 1 Mspksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e~a--~~~l~~k~-------------~~d~rvHii~Ldvt 64 (249)
T KOG1611|consen 1 MSPKSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPEKA--ATELALKS-------------KSDSRVHIIQLDVT 64 (249)
T ss_pred CCCccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChHHh--hHHHHHhh-------------ccCCceEEEEEecc
Confidence 45677999999999999999999977 4555566777765533 22222211 12389999999999
Q ss_pred CCCC-CCCHHHHHHH--hccccEEEEcceecccc--------ccHHHHHhhhHHHHHHHHHHH----Hhc----------
Q psy17679 122 LPGL-GLSETDRATL--VKQVNIVFHGAATVRFD--------EHIKMAVKINVCGVQAMLQLA----REM---------- 176 (303)
Q Consensus 122 d~~~-~~~~~~~~~~--~~~~dvVi~~a~~~~~~--------~~~~~~~~~N~~~~~~ll~~a----~~~---------- 176 (303)
+.++ .-...++.++ .++++++|+|||....+ ..+...+++|+.++..+.+.+ ++.
T Consensus 65 ~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s 144 (249)
T KOG1611|consen 65 CDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLS 144 (249)
T ss_pred cHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCccc
Confidence 8771 1111122233 23789999999986431 235678999999876654443 222
Q ss_pred CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccC
Q psy17679 177 KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYG 244 (303)
Q Consensus 177 ~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g 244 (303)
-+...+|++||..+.... ....+...|+++|.+.-.+.+.++-++. +-|.|||+-+.+|
T Consensus 145 ~~raaIinisS~~~s~~~---------~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMg 209 (249)
T KOG1611|consen 145 VSRAAIINISSSAGSIGG---------FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMG 209 (249)
T ss_pred ccceeEEEeeccccccCC---------CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCC
Confidence 022368999999554211 1223556788888877777776654443 5666999876654
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.9e-12 Score=116.26 Aligned_cols=216 Identities=11% Similarity=0.023 Sum_probs=127.8
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcC-CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSC-PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g-~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
++++++||||+++||.++++.|++.| +. |++++|+... .+++... +. ....++.++.+|++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~---V~l~~r~~~~------~~~~~~~-----l~----~~~~~~~~~~~Dl~ 63 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWH---VIMACRDFLK------AEQAAKS-----LG----MPKDSYTIMHLDLG 63 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCE---EEEEeCCHHH------HHHHHHH-----hc----CCCCeEEEEEcCCC
Confidence 36799999999999999999999999 76 8888886431 1111110 10 01246778899999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc----C-CCce
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM----K-DLKA 181 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~----~-~~~r 181 (303)
+.+ ++..++ .++|++|||||.... ...++..+++|+.+...+++.+.+. + +..|
T Consensus 64 ~~~------~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~ 137 (314)
T TIGR01289 64 SLD------SVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKR 137 (314)
T ss_pred CHH------HHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCe
Confidence 876 333333 368999999997421 1235678899999988887666542 1 1469
Q ss_pred EEEEeCCcccCCC------CccccCC---------------CCCCCChhhHHHHHHHHHHHHHHhhCcC-----Cc--EE
Q psy17679 182 FVHVSTAFTHCPR------ERIDEEF---------------YPVPLKYENLIQLISETGDEELSEMTPN-----RV--HI 233 (303)
Q Consensus 182 ~i~iSS~~~~~~~------~~~~E~~---------------~~~~~~~~~~~~~~k~~~E~~~~~~~~~-----~~--~i 233 (303)
||++||..+.... .+..-.+ ...+..+...|..+|.....+.+.+... .. +.
T Consensus 138 IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~ 217 (314)
T TIGR01289 138 LIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFAS 217 (314)
T ss_pred EEEEecCccccccCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 9999999543210 0000000 0122345566888888766655544322 22 56
Q ss_pred eeccee-cCccChH-H-HHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 234 SGTGWI-DNVYGPI-G-MLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 234 i~pg~~-~~~~g~~-~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+.||++ .+..+.. . .............. ..+...++.|+.++.++..+.
T Consensus 218 v~PG~v~~T~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~~l~~~~~~~~ 269 (314)
T TIGR01289 218 LYPGCIADTGLFREHVPLFRTLFPPFQKYIT------KGYVSEEEAGERLAQVVSDPK 269 (314)
T ss_pred ecCCcccCCcccccccHHHHHHHHHHHHHHh------ccccchhhhhhhhHHhhcCcc
Confidence 779976 2333221 1 11111100000110 124678889999998887654
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >KOG4169|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.5e-13 Score=111.88 Aligned_cols=162 Identities=19% Similarity=0.222 Sum_probs=111.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
..+|++++||+.|+||+.++++|+++|-. +.++.-+.....+..++++..+ ..++.|+++|++
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgik---~~~i~~~~En~~a~akL~ai~p--------------~~~v~F~~~DVt 65 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGIK---VLVIDDSEENPEAIAKLQAINP--------------SVSVIFIKCDVT 65 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCch---heeehhhhhCHHHHHHHhccCC--------------CceEEEEEeccc
Confidence 45899999999999999999999999776 4444444444444555544432 268999999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhc------CCCceEEEEeCC
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREM------KDLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~------~~~~r~i~iSS~ 188 (303)
+.. ++.++++ .+|++||.||..+ +.+++..+.+|+.|..+-..++... +...-+|++||.
T Consensus 66 ~~~------~~~~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv 138 (261)
T KOG4169|consen 66 NRG------DLEAAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSV 138 (261)
T ss_pred cHH------HHHHHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccc
Confidence 966 4555544 6899999999865 6779999999988765554444332 123568999999
Q ss_pred cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC------Cc--EEeeccee
Q psy17679 189 FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN------RV--HISGTGWI 239 (303)
Q Consensus 189 ~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~------~~--~ii~pg~~ 239 (303)
+|.. |......|..+|.-.-.+.++++.. .. ..++||.+
T Consensus 139 ~GL~------------P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t 185 (261)
T KOG4169|consen 139 AGLD------------PMPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFT 185 (261)
T ss_pred cccC------------ccccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcc
Confidence 8863 5555666666665444444443222 22 67778854
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.4e-12 Score=124.86 Aligned_cols=201 Identities=12% Similarity=0.117 Sum_probs=128.5
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|+++||||+++||.++++.|.+.|+. |++++|+.. +++++... ...++.++.+|+++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~~ 62 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQ---VVVADRNVE------RARERADS------------LGPDHHALAMDVSD 62 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH------------hCCceeEEEeccCC
Confidence 5789999999999999999999999987 888888643 22221111 01466789999998
Q ss_pred CCCCCCHHHHHHHh-------ccccEEEEcceecc---------ccccHHHHHhhhHHHHHHHHHHHHhc---CCC-ceE
Q psy17679 123 PGLGLSETDRATLV-------KQVNIVFHGAATVR---------FDEHIKMAVKINVCGVQAMLQLAREM---KDL-KAF 182 (303)
Q Consensus 123 ~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~---------~~~~~~~~~~~N~~~~~~ll~~a~~~---~~~-~r~ 182 (303)
++ ++..++ .++|++|||||... ....+...+++|+.++..+++++.+. .+. .+|
T Consensus 63 ~~------~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~i 136 (520)
T PRK06484 63 EA------QIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAI 136 (520)
T ss_pred HH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeE
Confidence 76 444443 36899999999731 12345678899999999888877653 122 389
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHH--h
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIA--T 254 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~--~ 254 (303)
|++||..+... ......|..+|...+.+.+.+...+ . +.+.||.+.+.+.......... .
T Consensus 137 v~isS~~~~~~------------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~ 204 (520)
T PRK06484 137 VNVASGAGLVA------------LPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPS 204 (520)
T ss_pred EEECCcccCCC------------CCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhH
Confidence 99999865432 1123456677777777776654443 2 6777886644332110000000 0
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.....+. ...+...+|+++++.+++...
T Consensus 205 ~~~~~~~-----~~~~~~~~~va~~v~~l~~~~ 232 (520)
T PRK06484 205 AVRSRIP-----LGRLGRPEEIAEAVFFLASDQ 232 (520)
T ss_pred HHHhcCC-----CCCCcCHHHHHHHHHHHhCcc
Confidence 0000000 112467899999999888754
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.5e-12 Score=103.91 Aligned_cols=205 Identities=11% Similarity=0.007 Sum_probs=132.7
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|.||||-+|+.|++..+++||+ |++++|++++... .+.+..++.|+.|+.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHe---VTAivRn~~K~~~-----------------------~~~~~i~q~Difd~~ 54 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHE---VTAIVRNASKLAA-----------------------RQGVTILQKDIFDLT 54 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCe---eEEEEeChHhccc-----------------------cccceeecccccChh
Confidence 68999999999999999999999999 9999998764321 257889999999988
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCCCC-
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYP- 203 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~~- 203 (303)
.+...+.+.|+||..-+........ . .......+++..+.+ +++|++.++.++.-- +.|....
T Consensus 55 ------~~a~~l~g~DaVIsA~~~~~~~~~~-~----~~k~~~~li~~l~~a-gv~RllVVGGAGSL~----id~g~rLv 118 (211)
T COG2910 55 ------SLASDLAGHDAVISAFGAGASDNDE-L----HSKSIEALIEALKGA-GVPRLLVVGGAGSLE----IDEGTRLV 118 (211)
T ss_pred ------hhHhhhcCCceEEEeccCCCCChhH-H----HHHHHHHHHHHHhhc-CCeeEEEEcCccceE----EcCCceee
Confidence 6778889999999887764322211 1 222256788888888 899999999884321 2222211
Q ss_pred -CCCChhhHHHHHHHHHHH--HHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHH
Q psy17679 204 -VPLKYENLIQLISETGDE--ELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSM 280 (303)
Q Consensus 204 -~~~~~~~~~~~~k~~~E~--~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai 280 (303)
.|..|-..+..++.++|. .++......++.+.|..++.+ |+.. ..+-.|.-..+. ....-++|...|.|-++
T Consensus 119 D~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~P-GerT--g~yrlggD~ll~--n~~G~SrIS~aDYAiA~ 193 (211)
T COG2910 119 DTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFEP-GERT--GNYRLGGDQLLV--NAKGESRISYADYAIAV 193 (211)
T ss_pred cCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHHhcCC-cccc--CceEeccceEEE--cCCCceeeeHHHHHHHH
Confidence 233333344444555553 233322223377777544333 3321 111112211112 23445789999999999
Q ss_pred HHHHhhcccCCcchhh
Q psy17679 281 ISIAWSIGESGKVEKA 296 (303)
Q Consensus 281 ~~~~~~~~~~~~~~~~ 296 (303)
+..+.+|.-..+.+.+
T Consensus 194 lDe~E~~~h~rqRftv 209 (211)
T COG2910 194 LDELEKPQHIRQRFTV 209 (211)
T ss_pred HHHHhcccccceeeee
Confidence 9999999876655543
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.1e-12 Score=110.77 Aligned_cols=191 Identities=15% Similarity=0.102 Sum_probs=117.1
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+++||||+++||.+++++|. +|+. |++++|++... .+..+++.+. ....+.++.+|++|.+
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~---Vil~~r~~~~~--~~~~~~l~~~------------~~~~~~~~~~Dv~d~~ 62 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGED---VVLAARRPEAA--QGLASDLRQR------------GATSVHVLSFDAQDLD 62 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCE---EEEEeCCHHHH--HHHHHHHHhc------------cCCceEEEEcccCCHH
Confidence 579999999999999999998 5776 88888874321 1111222110 0134778999999987
Q ss_pred CCCCHHHHHHHh-------ccccEEEEcceecccc-------ccHHHHHhhhHHHHHHHHHHH----HhcCCCceEEEEe
Q psy17679 125 LGLSETDRATLV-------KQVNIVFHGAATVRFD-------EHIKMAVKINVCGVQAMLQLA----REMKDLKAFVHVS 186 (303)
Q Consensus 125 ~~~~~~~~~~~~-------~~~dvVi~~a~~~~~~-------~~~~~~~~~N~~~~~~ll~~a----~~~~~~~r~i~iS 186 (303)
++..++ .++|++|||||..... ..+...+++|+.+...+++.+ .+.+...+||++|
T Consensus 63 ------~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~is 136 (246)
T PRK05599 63 ------THRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFS 136 (246)
T ss_pred ------HHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 333332 3689999999975321 112345667887776655444 2321246899999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhhhc
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLHTH 260 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~ 260 (303)
|..+... ......|..+|...+.+.+.+...+ . +.+.||++.+... .+..
T Consensus 137 S~~~~~~------------~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~---------~~~~--- 192 (246)
T PRK05599 137 SIAGWRA------------RRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMT---------TGMK--- 192 (246)
T ss_pred ccccccC------------CcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhh---------cCCC---
Confidence 9865432 1123356666666666666554332 2 5666886643321 0100
Q ss_pred cCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 261 LINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 261 ~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+ ... ....+|+|++++.++....
T Consensus 193 ---~-~~~-~~~pe~~a~~~~~~~~~~~ 215 (246)
T PRK05599 193 ---P-APM-SVYPRDVAAAVVSAITSSK 215 (246)
T ss_pred ---C-CCC-CCCHHHHHHHHHHHHhcCC
Confidence 0 000 2478999999999998754
|
|
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.4e-12 Score=108.66 Aligned_cols=205 Identities=13% Similarity=0.095 Sum_probs=128.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
..+++.||||||.+++|+.++.++.++|.. +.+.+.++... .+..+..... -++..+.+|+
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~---~vl~Din~~~~--~etv~~~~~~--------------g~~~~y~cdi 95 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGAK---LVLWDINKQGN--EETVKEIRKI--------------GEAKAYTCDI 95 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCCe---EEEEeccccch--HHHHHHHHhc--------------CceeEEEecC
Confidence 367789999999999999999999999886 77777766543 2333222211 2578999999
Q ss_pred CCCC-CCCCHHHHHHHhccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCCc
Q psy17679 121 SLPG-LGLSETDRATLVKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTAF 189 (303)
Q Consensus 121 ~d~~-~~~~~~~~~~~~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~~ 189 (303)
++.+ .-....++.+-...+|++|||||.... ++..+..+++|+.+.....++..+. .+..++|-++|+.
T Consensus 96 s~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~a 175 (300)
T KOG1201|consen 96 SDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVA 175 (300)
T ss_pred CCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhh
Confidence 9987 111111222333378999999998653 2234678899999876665555432 1668999999996
Q ss_pred ccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhC-------cCCc--EEeecceecCccChHHHHHHHHhhhhhhc
Q psy17679 190 THCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMT-------PNRV--HISGTGWIDNVYGPIGMLVGIATGVLHTH 260 (303)
Q Consensus 190 ~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~-------~~~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~ 260 (303)
|.... .....|-.||..+.-+.+.+. .... +.+.|+.+.+.+ +.+.
T Consensus 176 G~~g~------------~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgm---------f~~~---- 230 (300)
T KOG1201|consen 176 GLFGP------------AGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGM---------FDGA---- 230 (300)
T ss_pred cccCC------------ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccc---------cCCC----
Confidence 65422 122234444444433333322 2212 778887543222 1110
Q ss_pred cCCCCccccceehhHHHHHHHHHHhhcccC
Q psy17679 261 LINLNTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 261 ~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
..-....+.+..+-+|+.++.++......
T Consensus 231 -~~~~~l~P~L~p~~va~~Iv~ai~~n~~~ 259 (300)
T KOG1201|consen 231 -TPFPTLAPLLEPEYVAKRIVEAILTNQAG 259 (300)
T ss_pred -CCCccccCCCCHHHHHHHHHHHHHcCCcc
Confidence 01134456788899999999988866543
|
|
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.6e-12 Score=115.57 Aligned_cols=176 Identities=14% Similarity=0.116 Sum_probs=115.1
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+.+++++|||||.+||..+++.|..+|.. |+..+|+... ..+..+.+.. .....++.++++|+
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~---Vv~~~R~~~~--~~~~~~~i~~-----------~~~~~~i~~~~lDL 95 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALRGAH---VVLACRNEER--GEEAKEQIQK-----------GKANQKIRVIQLDL 95 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhCCCE---EEEEeCCHHH--HHHHHHHHHh-----------cCCCCceEEEECCC
Confidence 456789999999999999999999999976 9999998632 1222222221 11236888999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-----cccHHHHHhhhHHHHHHHHHHH----HhcCCCceEEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-----DEHIKMAVKINVCGVQAMLQLA----REMKDLKAFVH 184 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-----~~~~~~~~~~N~~~~~~ll~~a----~~~~~~~r~i~ 184 (303)
++.. .+.++.+ ..|+.|+|||+... ....+..+.+|+.|...|.+++ +.+ ...|||+
T Consensus 96 ssl~------SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-~~~RIV~ 168 (314)
T KOG1208|consen 96 SSLK------SVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS-APSRIVN 168 (314)
T ss_pred CCHH------HHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC-CCCCEEE
Confidence 9987 3444433 68999999998653 2346889999999976665555 444 3379999
Q ss_pred EeCCcccCCCCccccCCCCC-C-CChhhHHHHHHHHHHHHHHhhCcCCc-----EEeecceec
Q psy17679 185 VSTAFTHCPRERIDEEFYPV-P-LKYENLIQLISETGDEELSEMTPNRV-----HISGTGWID 240 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~-~-~~~~~~~~~~k~~~E~~~~~~~~~~~-----~ii~pg~~~ 240 (303)
+||... .....+..-.... . ...+..|..+|.....+..++.+.+. ..+-||.+.
T Consensus 169 vsS~~~-~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~ 230 (314)
T KOG1208|consen 169 VSSILG-GGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVK 230 (314)
T ss_pred EcCccc-cCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCccc
Confidence 999955 2111111111111 1 33334578888766666665554442 344488553
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.2e-11 Score=108.46 Aligned_cols=198 Identities=17% Similarity=0.117 Sum_probs=132.7
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|+||||||++|++++++|+++|++ |.+++|++...... ..++++..+|+.+..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~---v~~~~r~~~~~~~~----------------------~~~v~~~~~d~~~~~ 55 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHE---VRAAVRNPEAAAAL----------------------AGGVEVVLGDLRDPK 55 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCE---EEEEEeCHHHHHhh----------------------cCCcEEEEeccCCHh
Confidence 57999999999999999999999988 99999986532210 158889999999988
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCCCCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPV 204 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~~~ 204 (303)
.+...+++.|.++++.+... ... ...........+..+.+. . +.++++++|...+..
T Consensus 56 ------~l~~a~~G~~~~~~i~~~~~-~~~--~~~~~~~~~~~~~a~~a~-~-~~~~~~~~s~~~~~~------------ 112 (275)
T COG0702 56 ------SLVAGAKGVDGVLLISGLLD-GSD--AFRAVQVTAVVRAAEAAG-A-GVKHGVSLSVLGADA------------ 112 (275)
T ss_pred ------HHHHHhccccEEEEEecccc-ccc--chhHHHHHHHHHHHHHhc-C-CceEEEEeccCCCCC------------
Confidence 68899999999999988765 332 122223333344444444 2 578889888885432
Q ss_pred CCChhhHHHHHHHHHHHHHHhhCcCCcEEee-cceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHH
Q psy17679 205 PLKYENLIQLISETGDEELSEMTPNRVHISG-TGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISI 283 (303)
Q Consensus 205 ~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~-pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~ 283 (303)
.....|..+|..+|..+......+. +++ ++++.+..... .......+.+.. ..+.....++..+|++.++...
T Consensus 113 --~~~~~~~~~~~~~e~~l~~sg~~~t-~lr~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~i~~~d~a~~~~~~ 186 (275)
T COG0702 113 --ASPSALARAKAAVEAALRSSGIPYT-TLRRAAFYLGAGAAF-IEAAEAAGLPVI--PRGIGRLSPIAVDDVAEALAAA 186 (275)
T ss_pred --CCccHHHHHHHHHHHHHHhcCCCeE-EEecCeeeeccchhH-HHHHHhhCCcee--cCCCCceeeeEHHHHHHHHHHH
Confidence 1234566777888999988776654 555 54443333222 212222222222 2233378899999999999999
Q ss_pred HhhcccCCcchhh
Q psy17679 284 AWSIGESGKVEKA 296 (303)
Q Consensus 284 ~~~~~~~~~~~~~ 296 (303)
+..+...+..+.+
T Consensus 187 l~~~~~~~~~~~l 199 (275)
T COG0702 187 LDAPATAGRTYEL 199 (275)
T ss_pred hcCCcccCcEEEc
Confidence 9877655444443
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=9e-12 Score=106.60 Aligned_cols=161 Identities=9% Similarity=0.030 Sum_probs=102.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||++.||.+++++|.+.|+. |+++.|+.+.. .+..+++.+ ...++..+.+|+.
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~---V~~~~r~~~~l--~~~~~~i~~-------------~~~~~~~~~~D~~ 64 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGAT---LILCDQDQSAL--KDTYEQCSA-------------LTDNVYSFQLKDF 64 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCE---EEEEcCCHHHH--HHHHHHHHh-------------cCCCeEEEEccCC
Confidence 46789999999999999999999999987 88888864321 111111111 0145677889998
Q ss_pred CCCCCCCHHHHHHHh-------c-cccEEEEcceeccc-----c---ccHHHHHhhhHHHHHHHHHHHH----hcCCCce
Q psy17679 122 LPGLGLSETDRATLV-------K-QVNIVFHGAATVRF-----D---EHIKMAVKINVCGVQAMLQLAR----EMKDLKA 181 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~-~~dvVi~~a~~~~~-----~---~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r 181 (303)
+.+ ++..++ . .+|++|||||.... + ..+...+++|+.++..+++.+. ..++..+
T Consensus 65 ~~~------~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~ 138 (227)
T PRK08862 65 SQE------SIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGV 138 (227)
T ss_pred CHH------HHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCce
Confidence 876 343332 3 68999999974321 1 1234466777777666654443 2212468
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecC
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDN 241 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~ 241 (303)
||++||..+.. .+..|..+|...+.+.+.++..+ . ..+.||++.+
T Consensus 139 Iv~isS~~~~~---------------~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t 189 (227)
T PRK08862 139 IVNVISHDDHQ---------------DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSA 189 (227)
T ss_pred EEEEecCCCCC---------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcC
Confidence 99999864321 13345666666666666554332 2 6777987644
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.1e-11 Score=100.81 Aligned_cols=150 Identities=15% Similarity=0.216 Sum_probs=108.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+.+-+||||||+.+||..+++++.+.|.+ |+++.|+. +++++.+.. .+.+....+|+.
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~---VIi~gR~e------~~L~e~~~~-------------~p~~~t~v~Dv~ 60 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNT---VIICGRNE------ERLAEAKAE-------------NPEIHTEVCDVA 60 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCE---EEEecCcH------HHHHHHHhc-------------Ccchheeeeccc
Confidence 45678999999999999999999999998 99999974 344443321 267888999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc---c------ccHHHHHhhhHHHHHHHHHHHHhc---CCCceE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF---D------EHIKMAVKINVCGVQAMLQLAREM---KDLKAF 182 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~---~------~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~ 182 (303)
|.+ ....+.+ ..+++|||||+... . ...+.-+++|+.++.+|..+..+. +....+
T Consensus 61 d~~------~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~I 134 (245)
T COG3967 61 DRD------SRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATI 134 (245)
T ss_pred chh------hHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceE
Confidence 987 2333332 67999999998532 1 123456778999999888777654 245689
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV 231 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~ 231 (303)
|.+||--++. |...+..|-.+|.....+..++.++..
T Consensus 135 InVSSGLafv------------Pm~~~PvYcaTKAaiHsyt~aLR~Qlk 171 (245)
T COG3967 135 INVSSGLAFV------------PMASTPVYCATKAAIHSYTLALREQLK 171 (245)
T ss_pred EEeccccccC------------cccccccchhhHHHHHHHHHHHHHHhh
Confidence 9999996653 444555666777666666666655544
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.6e-11 Score=108.53 Aligned_cols=212 Identities=10% Similarity=0.028 Sum_probs=121.8
Q ss_pred EEeCCcchhHHHHHHHHHhcC-CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCC
Q psy17679 48 FLTGGTGFMGKTVVEKLLRSC-PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLG 126 (303)
Q Consensus 48 lItGatG~iG~~l~~~Ll~~g-~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~ 126 (303)
+||||+++||.+++++|++.| +. |++.+|+.... .+..+++ . ....++.++.+|+++.+
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~---V~~~~r~~~~~--~~~~~~l---------~----~~~~~~~~~~~Dl~d~~-- 60 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWH---VVMACRDFLKA--ERAAKSA---------G----MPKDSYTVMHLDLASLD-- 60 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCE---EEEEeCCHHHH--HHHHHHh---------c----CCCCeEEEEEecCCCHH--
Confidence 599999999999999999999 76 88888864311 1111111 0 01146788999999976
Q ss_pred CCHHHHHHHh-------ccccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CC--CceEEEEe
Q psy17679 127 LSETDRATLV-------KQVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KD--LKAFVHVS 186 (303)
Q Consensus 127 ~~~~~~~~~~-------~~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~--~~r~i~iS 186 (303)
++..++ ..+|++|||||.... ...++..+++|+.++..+++.+.+. .+ ..|||++|
T Consensus 61 ----~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vs 136 (308)
T PLN00015 61 ----SVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVG 136 (308)
T ss_pred ----HHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEe
Confidence 344333 268999999997421 1245678899999988776665442 13 46999999
Q ss_pred CCcccCCC-----Cc---cc----------cCCC-----CCCCChhhHHHHHHHHHHHHHHhhCcC-----Cc--EEeec
Q psy17679 187 TAFTHCPR-----ER---ID----------EEFY-----PVPLKYENLIQLISETGDEELSEMTPN-----RV--HISGT 236 (303)
Q Consensus 187 S~~~~~~~-----~~---~~----------E~~~-----~~~~~~~~~~~~~k~~~E~~~~~~~~~-----~~--~ii~p 236 (303)
|..+.... .+ +. +... ..+......|..+|.....+.+.+... .. +.+.|
T Consensus 137 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~P 216 (308)
T PLN00015 137 SITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYP 216 (308)
T ss_pred ccccccccccccCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecC
Confidence 98553210 00 00 0000 012234556788887645544433222 22 66779
Q ss_pred cee-cCccChH-HHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 237 GWI-DNVYGPI-GMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 237 g~~-~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
|++ .+..... ................ ..+...++.|+.++.++..+.
T Consensus 217 G~v~~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~pe~~a~~~~~l~~~~~ 265 (308)
T PLN00015 217 GCIATTGLFREHIPLFRLLFPPFQKYIT-----KGYVSEEEAGKRLAQVVSDPS 265 (308)
T ss_pred CcccCccccccccHHHHHHHHHHHHHHh-----cccccHHHhhhhhhhhccccc
Confidence 987 3332211 1000101000001010 114678899999988777544
|
|
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.7e-11 Score=97.54 Aligned_cols=213 Identities=14% Similarity=0.120 Sum_probs=129.1
Q ss_pred ccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEE
Q psy17679 37 PMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAV 116 (303)
Q Consensus 37 ~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~ 116 (303)
+..+..+.+.++||||+..||++++..|.+.|+. |.+.+++...+ ++...++ + ...+-..+
T Consensus 7 ~~~~r~~sk~~~vtGg~sGIGrAia~~la~~Gar---v~v~dl~~~~A--~ata~~L-~-------------g~~~h~aF 67 (256)
T KOG1200|consen 7 EVVQRLMSKVAAVTGGSSGIGRAIAQLLAKKGAR---VAVADLDSAAA--EATAGDL-G-------------GYGDHSAF 67 (256)
T ss_pred HHHHHHhcceeEEecCCchHHHHHHHHHHhcCcE---EEEeecchhhH--HHHHhhc-C-------------CCCcccee
Confidence 3445566789999999999999999999999998 77777765422 2222111 1 11345578
Q ss_pred EecCCCCCCCC-CHHHHHHHhccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-----CCCceEE
Q psy17679 117 AGDCSLPGLGL-SETDRATLVKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-----KDLKAFV 183 (303)
Q Consensus 117 ~~Dl~d~~~~~-~~~~~~~~~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-----~~~~r~i 183 (303)
.+|+++..... ..++..+.+..+++++||||+... ...|..++.+|..|+..+.+++.+. +..-+||
T Consensus 68 ~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIi 147 (256)
T KOG1200|consen 68 SCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSII 147 (256)
T ss_pred eeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEE
Confidence 99999876100 011222233379999999998653 4578899999999988887777543 1223899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc--EEeecceecCccC---hHHHHHHHHhhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV--HISGTGWIDNVYG---PIGMLVGIATGVLH 258 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~~~~~g---~~~~~~~~~~~~~~ 258 (303)
++||+-+.......+. +..+..+....+| ...++...+.. .++.||.+.+.+. |......+....+.
T Consensus 148 NvsSIVGkiGN~GQtn----YAAsK~GvIgftk----taArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPm 219 (256)
T KOG1200|consen 148 NVSSIVGKIGNFGQTN----YAASKGGVIGFTK----TAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPM 219 (256)
T ss_pred eehhhhcccccccchh----hhhhcCceeeeeH----HHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCc
Confidence 9999944322110000 0111111222233 33444444444 7888997766553 22333333332221
Q ss_pred hccCCCCccccceehhHHHHHHHHHHh
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAW 285 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~ 285 (303)
..+-...|+|..+.+++.
T Consensus 220 ---------gr~G~~EevA~~V~fLAS 237 (256)
T KOG1200|consen 220 ---------GRLGEAEEVANLVLFLAS 237 (256)
T ss_pred ---------cccCCHHHHHHHHHHHhc
Confidence 124567899999998884
|
|
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.1e-11 Score=105.62 Aligned_cols=220 Identities=15% Similarity=0.118 Sum_probs=133.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++|||++.+||++++.+|.+.|.. |++..|+.+... +...++.... ....++..+.+|+
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~---v~i~~r~~~~~~--~~~~~~~~~~----------~~~~~~~~~~~Dv 69 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGAK---VVITGRSEERLE--ETAQELGGLG----------YTGGKVLAIVCDV 69 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHHHH--HHHHHHHhcC----------CCCCeeEEEECcC
Confidence 467899999999999999999999999998 989999754211 1111111110 0125788999999
Q ss_pred CCCC--CCCCHHHHHHHhccccEEEEcceecccc--------ccHHHHHhhhHHH-HHHHHHHHHhc---CCCceEEEEe
Q psy17679 121 SLPG--LGLSETDRATLVKQVNIVFHGAATVRFD--------EHIKMAVKINVCG-VQAMLQLAREM---KDLKAFVHVS 186 (303)
Q Consensus 121 ~d~~--~~~~~~~~~~~~~~~dvVi~~a~~~~~~--------~~~~~~~~~N~~~-~~~ll~~a~~~---~~~~r~i~iS 186 (303)
++.+ ..+......+.+.++|++|||||..... +.|...+++|+.| ...+.+.+... ++...++++|
T Consensus 70 ~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~s 149 (270)
T KOG0725|consen 70 SKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNIS 149 (270)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEe
Confidence 9765 0011112222244799999999986532 3456788999995 56666665543 2456788888
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHH----HHHHHHhhh
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIG----MLVGIATGV 256 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~----~~~~~~~~~ 256 (303)
|..+.... +..+ ..|..+|...+++.+.++..+. ..+.||.+.+...... .........
T Consensus 150 s~~~~~~~----------~~~~-~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~ 218 (270)
T KOG0725|consen 150 SVAGVGPG----------PGSG-VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEAT 218 (270)
T ss_pred ccccccCC----------CCCc-ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhh
Confidence 88554321 1111 4567777778888776655443 5677885544331000 001111110
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
......-.-.+...+|++.++.+++.....
T Consensus 219 ---~~~~~~p~gr~g~~~eva~~~~fla~~~as 248 (270)
T KOG0725|consen 219 ---DSKGAVPLGRVGTPEEVAEAAAFLASDDAS 248 (270)
T ss_pred ---ccccccccCCccCHHHHHHhHHhhcCcccc
Confidence 000011122356889999999988876544
|
|
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.3e-11 Score=103.06 Aligned_cols=166 Identities=14% Similarity=0.159 Sum_probs=115.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
...+|-|||||+..++|+.+|++|.++|+. |++-+-.+.+.. .+.... + .++...++.|+
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~---V~Agcl~~~gae---~L~~~~-----------~---s~rl~t~~LDV 85 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFR---VFAGCLTEEGAE---SLRGET-----------K---SPRLRTLQLDV 85 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCE---EEEEeecCchHH---HHhhhh-----------c---CCcceeEeecc
Confidence 355688999999999999999999999998 777775444322 221111 0 37888899999
Q ss_pred CCCCCCCCHHHHHHHhc---------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc--CCCce
Q psy17679 121 SLPGLGLSETDRATLVK---------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM--KDLKA 181 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~---------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r 181 (303)
++++ .+.++.+ +...||||||+... -.++...+++|+.|+.++.+..... +...|
T Consensus 86 T~~e------si~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGR 159 (322)
T KOG1610|consen 86 TKPE------SVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGR 159 (322)
T ss_pred CCHH------HHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCe
Confidence 9988 4554433 57899999996532 2345678899999987776666543 14479
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c---EEeecceec-CccC
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V---HISGTGWID-NVYG 244 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~---~ii~pg~~~-~~~g 244 (303)
+|++||..|-. +.+..+.|-.+|...|.+.+.+.... + .++-||.+. ++++
T Consensus 160 vVnvsS~~GR~------------~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 160 VVNVSSVLGRV------------ALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred EEEecccccCc------------cCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence 99999997632 33345556667777777776554332 2 677899664 5554
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.31 E-value=7.7e-11 Score=104.87 Aligned_cols=222 Identities=11% Similarity=0.064 Sum_probs=123.4
Q ss_pred cCCcEEEEeCC--cchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccC-cCcCCceEEEEe
Q psy17679 42 YRDKTIFLTGG--TGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEV-PDFRSKVSAVAG 118 (303)
Q Consensus 42 ~~~~~vlItGa--tG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~-~~~~~~v~~~~~ 118 (303)
+++|+++|||| +.+||.++++.|.+.|.. |++ .|.... .+.+..-....-........ .........+.+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~---Vv~-~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAE---ILV-GTWVPA---LNIFETSLRRGKFDESRKLPDGSLMEITKVYPL 79 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCE---EEE-EeCcch---hhHHHHhhhccccchhhhcccccccCcCeeeec
Confidence 78899999999 799999999999999987 655 554321 11111000000000000000 000112457788
Q ss_pred cC--CCCC-C-----------CCCHHHHHHHh-------ccccEEEEcceecc-----c----cccHHHHHhhhHHHHHH
Q psy17679 119 DC--SLPG-L-----------GLSETDRATLV-------KQVNIVFHGAATVR-----F----DEHIKMAVKINVCGVQA 168 (303)
Q Consensus 119 Dl--~d~~-~-----------~~~~~~~~~~~-------~~~dvVi~~a~~~~-----~----~~~~~~~~~~N~~~~~~ 168 (303)
|+ .+.+ . +....++..++ .++|++|||||... + ...+...+++|+.+...
T Consensus 80 D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~ 159 (303)
T PLN02730 80 DAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVS 159 (303)
T ss_pred ceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHH
Confidence 88 3222 0 00111233332 36899999996421 1 23467788999999988
Q ss_pred HHHHHHhc-CCCceEEEEeCCcccCCCCccccCCCCCCCChh-hHHHHHHHHHHHHHHhhCcC-----Cc--EEeeccee
Q psy17679 169 MLQLAREM-KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYE-NLIQLISETGDEELSEMTPN-----RV--HISGTGWI 239 (303)
Q Consensus 169 ll~~a~~~-~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~-~~~~~~k~~~E~~~~~~~~~-----~~--~ii~pg~~ 239 (303)
+.+.+.+. ....++|++||..+... ...+ ..|..+|...+.+.+.+... .. +.+.||++
T Consensus 160 l~~~~~p~m~~~G~II~isS~a~~~~------------~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v 227 (303)
T PLN02730 160 LLQHFGPIMNPGGASISLTYIASERI------------IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPL 227 (303)
T ss_pred HHHHHHHHHhcCCEEEEEechhhcCC------------CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCc
Confidence 88887664 11268999999855321 1112 24677777777777655432 22 67779987
Q ss_pred cCccChHH-HHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 240 DNVYGPIG-MLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 240 ~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.+...... ............. + ...+...+|++.++++++...
T Consensus 228 ~T~~~~~~~~~~~~~~~~~~~~---p--l~r~~~peevA~~~~fLaS~~ 271 (303)
T PLN02730 228 GSRAAKAIGFIDDMIEYSYANA---P--LQKELTADEVGNAAAFLASPL 271 (303)
T ss_pred cCchhhcccccHHHHHHHHhcC---C--CCCCcCHHHHHHHHHHHhCcc
Confidence 65542210 0000000000000 1 113467899999999998744
|
|
| >KOG2774|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.7e-11 Score=101.58 Aligned_cols=215 Identities=16% Similarity=0.112 Sum_probs=138.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEe-CCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLV-RPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~-R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
.+..+|||||+-|.+|..+++.|... |.+ .|+.-+ ++++ . .....-.++..|
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~--~VILSDI~KPp-~-----------------------~V~~~GPyIy~D 95 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYMYGSE--CVILSDIVKPP-A-----------------------NVTDVGPYIYLD 95 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHHhCCc--cEehhhccCCc-h-----------------------hhcccCCchhhh
Confidence 45578999999999999999999777 444 354422 2222 0 011344578889
Q ss_pred CCCCCCCCCHHHHHHHh--ccccEEEEcceeccc--cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCC
Q psy17679 120 CSLPGLGLSETDRATLV--KQVNIVFHGAATVRF--DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRE 195 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~--~~~dvVi~~a~~~~~--~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~ 195 (303)
+.|.. .+.++. ..+|.+||..+..+. +.+.....++|+.|..++++.|.+. +.+ +..-|+++++++..
T Consensus 96 ILD~K------~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL~-iFVPSTIGAFGPtS 167 (366)
T KOG2774|consen 96 ILDQK------SLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KLK-VFVPSTIGAFGPTS 167 (366)
T ss_pred hhccc------cHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-Cee-EeecccccccCCCC
Confidence 88866 344443 489999999887542 3455667789999999999999998 664 44456667666554
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcE---Eee-cceecC-ccCh------HHHHHHHHhhhhhhccCCC
Q psy17679 196 RIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRVH---ISG-TGWIDN-VYGP------IGMLVGIATGVLHTHLINL 264 (303)
Q Consensus 196 ~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~---ii~-pg~~~~-~~g~------~~~~~~~~~~~~~~~~~~~ 264 (303)
+-......---.|...|..+|..+|-+-+.+...++. ..+ ||.+.+ .-|. ...+...........+..+
T Consensus 168 PRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrp 247 (366)
T KOG2774|consen 168 PRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRP 247 (366)
T ss_pred CCCCCCCeeeecCceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCC
Confidence 4333322211234445556777788777777666552 222 554422 1111 1233333333334567778
Q ss_pred CccccceehhHHHHHHHHHHhhcccC
Q psy17679 265 NTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 265 ~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
++...++|..||-++++..+..++.+
T Consensus 248 dtrlpmmy~~dc~~~~~~~~~a~~~~ 273 (366)
T KOG2774|consen 248 DTRLPMMYDTDCMASVIQLLAADSQS 273 (366)
T ss_pred CccCceeehHHHHHHHHHHHhCCHHH
Confidence 99999999999999999998876543
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.8e-11 Score=102.90 Aligned_cols=196 Identities=13% Similarity=0.138 Sum_probs=127.0
Q ss_pred CCc--chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCCCC
Q psy17679 51 GGT--GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLS 128 (303)
Q Consensus 51 Gat--G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~ 128 (303)
|++ +.||+++++.|++.|+. |++..|+... ..+.++++.+. ....++.+|+++.+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~---V~~~~~~~~~--~~~~~~~l~~~--------------~~~~~~~~D~~~~~---- 57 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGAN---VILTDRNEEK--LADALEELAKE--------------YGAEVIQCDLSDEE---- 57 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEE---EEEEESSHHH--HHHHHHHHHHH--------------TTSEEEESCTTSHH----
T ss_pred CCCCCCChHHHHHHHHHHCCCE---EEEEeCChHH--HHHHHHHHHHH--------------cCCceEeecCcchH----
Confidence 566 99999999999999998 9999997542 12334444332 12336999999876
Q ss_pred HHHHHHH-------h-ccccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeCC
Q psy17679 129 ETDRATL-------V-KQVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVSTA 188 (303)
Q Consensus 129 ~~~~~~~-------~-~~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS~ 188 (303)
++..+ + .++|++||+++.... ...+...+++|+.+...+++.+.+. ....++|++||.
T Consensus 58 --~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~ 135 (241)
T PF13561_consen 58 --SVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSI 135 (241)
T ss_dssp --HHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEG
T ss_pred --HHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccch
Confidence 44444 4 578999999997543 1234678888999998888887553 123689999999
Q ss_pred cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhh----Cc-CCc--EEeecceecCccChHHH-HHHHHhhhhhhc
Q psy17679 189 FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEM----TP-NRV--HISGTGWIDNVYGPIGM-LVGIATGVLHTH 260 (303)
Q Consensus 189 ~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~----~~-~~~--~ii~pg~~~~~~g~~~~-~~~~~~~~~~~~ 260 (303)
.+.. +...+..|..+|...+.+.+.+ .+ ... +.|.||++.+....... ............
T Consensus 136 ~~~~------------~~~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~ 203 (241)
T PF13561_consen 136 AAQR------------PMPGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRI 203 (241)
T ss_dssp GGTS------------BSTTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHS
T ss_pred hhcc------------cCccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhh
Confidence 6542 2335556777777777766644 44 333 78889877554422111 111111111111
Q ss_pred cCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 261 LINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 261 ~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+ ...+...+|+|+++++++.+..
T Consensus 204 p-----l~r~~~~~evA~~v~fL~s~~a 226 (241)
T PF13561_consen 204 P-----LGRLGTPEEVANAVLFLASDAA 226 (241)
T ss_dssp T-----TSSHBEHHHHHHHHHHHHSGGG
T ss_pred c-----cCCCcCHHHHHHHHHHHhCccc
Confidence 1 1125699999999999998653
|
... |
| >KOG1209|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.2e-11 Score=99.40 Aligned_cols=146 Identities=16% Similarity=0.237 Sum_probs=105.1
Q ss_pred CCcEEEEeCCc-chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 43 RDKTIFLTGGT-GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 43 ~~~~vlItGat-G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+.++|+|||++ |+||.++++++.++|+. |++++|.-+ .+.+|... .++.....|++
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~---V~AtaR~~e------~M~~L~~~--------------~gl~~~kLDV~ 62 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYL---VYATARRLE------PMAQLAIQ--------------FGLKPYKLDVS 62 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeE---EEEEccccc------hHhhHHHh--------------hCCeeEEeccC
Confidence 56889999977 99999999999999998 999999743 22222211 57889999999
Q ss_pred CCCCCCCHHHHHHHhc--------cccEEEEcceecc----c---cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK--------QVNIVFHGAATVR----F---DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~--------~~dvVi~~a~~~~----~---~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~ 184 (303)
+++ .+.+... +.|+++||||..= . ....+..|++|+.|..+..++.... .....||+
T Consensus 63 ~~~------~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVn 136 (289)
T KOG1209|consen 63 KPE------EVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVN 136 (289)
T ss_pred ChH------HHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEE
Confidence 987 3443322 6899999999732 1 2234678899999876665554422 14468999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN 229 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~ 229 (303)
++|..+. .|....+.|..+|....++.+.+.-.
T Consensus 137 vgSl~~~------------vpfpf~~iYsAsKAAihay~~tLrlE 169 (289)
T KOG1209|consen 137 VGSLAGV------------VPFPFGSIYSASKAAIHAYARTLRLE 169 (289)
T ss_pred ecceeEE------------eccchhhhhhHHHHHHHHhhhhcEEe
Confidence 9999554 24556778888888777777765433
|
|
| >KOG4039|consensus | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.4e-11 Score=96.35 Aligned_cols=154 Identities=21% Similarity=0.240 Sum_probs=111.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|++|.++|.||||-+|+.+++.+++. ..+..|+++.|.+... +.....+.....|.+
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~-~~FSKV~~i~RR~~~d----------------------~at~k~v~q~~vDf~ 72 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEA-PQFSKVYAILRRELPD----------------------PATDKVVAQVEVDFS 72 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhc-ccceeEEEEEeccCCC----------------------ccccceeeeEEechH
Confidence 77899999999999999999999998 4567899999974211 122356667777876
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEF 201 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~ 201 (303)
..+ ++...+.++|+.+.+-|...-....+-++++..--...+.++|++. +|++|+.+||.++....
T Consensus 73 Kl~------~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~-Gck~fvLvSS~GAd~sS------- 138 (238)
T KOG4039|consen 73 KLS------QLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEK-GCKTFVLVSSAGADPSS------- 138 (238)
T ss_pred HHH------HHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhC-CCeEEEEEeccCCCccc-------
Confidence 544 5666777999999998875433333344455555567888999998 99999999999765321
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeeccee
Q psy17679 202 YPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWI 239 (303)
Q Consensus 202 ~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~ 239 (303)
.-.|-..|...|+-+.++.-....|+|||.+
T Consensus 139 -------rFlY~k~KGEvE~~v~eL~F~~~~i~RPG~l 169 (238)
T KOG4039|consen 139 -------RFLYMKMKGEVERDVIELDFKHIIILRPGPL 169 (238)
T ss_pred -------ceeeeeccchhhhhhhhccccEEEEecCcce
Confidence 2234455777787777765554579999865
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.3e-10 Score=99.04 Aligned_cols=167 Identities=17% Similarity=0.226 Sum_probs=108.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+++||..+++.|.+.|+. |+++.|..... ..+.+.+... .... ..+.+..+|++
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~---v~~~~~~~~~~-~~~~~~~~~~----------~~~~-~~~~~~~~Dvs 67 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGAR---VVVAARRSEEE-AAEALAAAIK----------EAGG-GRAAAVAADVS 67 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCe---EEEEcCCCchh-hHHHHHHHHH----------hcCC-CcEEEEEecCC
Confidence 56789999999999999999999999987 77777765421 1111111110 0000 35777889999
Q ss_pred C-CCCCCCHHHHHHHh-------ccccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEE
Q psy17679 122 L-PGLGLSETDRATLV-------KQVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHV 185 (303)
Q Consensus 122 d-~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~i 185 (303)
+ .. ++..++ .++|++|||||.... ...++..+++|+.+...+.+.+......++||++
T Consensus 68 ~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~i 141 (251)
T COG1028 68 DDEE------SVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNI 141 (251)
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEE
Confidence 7 44 333333 258999999997532 2345788899999988888755443111299999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecC
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDN 241 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~ 241 (303)
||..+. ... +. +..|..+|.....+.+.+... .. +.+.||++.+
T Consensus 142 sS~~~~-~~~---------~~--~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t 191 (251)
T COG1028 142 SSVAGL-GGP---------PG--QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDT 191 (251)
T ss_pred CCchhc-CCC---------CC--cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCC
Confidence 999654 321 11 456667776666666655422 22 6777986543
|
|
| >KOG1203|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.5e-10 Score=103.50 Aligned_cols=216 Identities=17% Similarity=0.131 Sum_probs=128.4
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+..+.++|+|+||||.+|+-+++.|+++|+. |.+++|+...+. +++.. .........+..|
T Consensus 75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~---vra~VRd~~~a~------~~~~~----------~~~d~~~~~v~~~ 135 (411)
T KOG1203|consen 75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFS---VRALVRDEQKAE------DLLGV----------FFVDLGLQNVEAD 135 (411)
T ss_pred CCCCCCeEEEecCCCchhHHHHHHHHHCCCe---eeeeccChhhhh------hhhcc----------cccccccceeeec
Confidence 4566789999999999999999999999987 999999864322 11110 0001233344444
Q ss_pred CCCCCCCCCHHHHHHHhc----cccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCC
Q psy17679 120 CSLPGLGLSETDRATLVK----QVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRE 195 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~----~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~ 195 (303)
..... .....+.+ ...+++-+++-.....+...-..+...|+++++++|+.. +++|++++||+.+.....
T Consensus 136 ~~~~~-----d~~~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv~si~~~~~~~ 209 (411)
T KOG1203|consen 136 VVTAI-----DILKKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLVGSIGGTKFNQ 209 (411)
T ss_pred ccccc-----chhhhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-CCceEEEEEeecCcccCC
Confidence 33221 01222222 345666666644333211223356889999999999999 999999999997654321
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhH
Q psy17679 196 RIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDL 275 (303)
Q Consensus 196 ~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 275 (303)
+ .......+.+..+|..+|.++..-.-.+ +||+||-+..-.|........-.. ..+ .+...-..|.-.|
T Consensus 210 ~------~~~~~~~~~~~~~k~~~e~~~~~Sgl~y-tiIR~g~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~i~r~~ 278 (411)
T KOG1203|consen 210 P------PNILLLNGLVLKAKLKAEKFLQDSGLPY-TIIRPGGLEQDTGGQREVVVDDEK---ELL-TVDGGAYSISRLD 278 (411)
T ss_pred C------chhhhhhhhhhHHHHhHHHHHHhcCCCc-EEEeccccccCCCCcceecccCcc---ccc-cccccceeeehhh
Confidence 0 0011113345566778888888544444 699987554433322111111111 111 1111114688899
Q ss_pred HHHHHHHHHhhcccCC
Q psy17679 276 VVNSMISIAWSIGESG 291 (303)
Q Consensus 276 ~a~ai~~~~~~~~~~~ 291 (303)
+|+..+.++.++....
T Consensus 279 vael~~~all~~~~~~ 294 (411)
T KOG1203|consen 279 VAELVAKALLNEAATF 294 (411)
T ss_pred HHHHHHHHHhhhhhcc
Confidence 9999999998887654
|
|
| >KOG4288|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.5e-10 Score=94.33 Aligned_cols=207 Identities=17% Similarity=0.096 Sum_probs=147.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
++--++++.|+.||.|+++++.....+++ |-.+.|++.+.. + ..|...++++.+|..
T Consensus 50 ve~e~tlvlggnpfsgs~vlk~A~~vv~s---vgilsen~~k~~-l-------------------~sw~~~vswh~gnsf 106 (283)
T KOG4288|consen 50 VEVEWTLVLGGNPFSGSEVLKNATNVVHS---VGILSENENKQT-L-------------------SSWPTYVSWHRGNSF 106 (283)
T ss_pred hhHHHHhhhcCCCcchHHHHHHHHhhcee---eeEeecccCcch-h-------------------hCCCcccchhhcccc
Confidence 33346899999999999999999999888 888999865221 1 134578888999977
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC-cccCCCCccccC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA-FTHCPRERIDEE 200 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~-~~~~~~~~~~E~ 200 (303)
... -+.....++..++.+++-. .+.....++|-....+..+++.+. ++++|+|+|.. ++..
T Consensus 107 ssn------~~k~~l~g~t~v~e~~ggf---gn~~~m~~ing~ani~a~kaa~~~-gv~~fvyISa~d~~~~-------- 168 (283)
T KOG4288|consen 107 SSN------PNKLKLSGPTFVYEMMGGF---GNIILMDRINGTANINAVKAAAKA-GVPRFVYISAHDFGLP-------- 168 (283)
T ss_pred ccC------cchhhhcCCcccHHHhcCc---cchHHHHHhccHhhHHHHHHHHHc-CCceEEEEEhhhcCCC--------
Confidence 665 2566777888888887743 233344566777777788888888 99999999998 4332
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecC---ccChH-------HHHHHHHhh---hhhhccCCCCcc
Q psy17679 201 FYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDN---VYGPI-------GMLVGIATG---VLHTHLINLNTV 267 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~---~~g~~-------~~~~~~~~~---~~~~~~~~~~~~ 267 (303)
|..+. .|-..|..+|..+.......+.|+|||.+.+ +.|+. ..+...... ....++.-+.-.
T Consensus 169 ----~~i~r-GY~~gKR~AE~Ell~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~ 243 (283)
T KOG4288|consen 169 ----PLIPR-GYIEGKREAEAELLKKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLL 243 (283)
T ss_pred ----Cccch-hhhccchHHHHHHHHhcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCccccccc
Confidence 23333 4666688899999888776668999997643 22221 122222221 122344446777
Q ss_pred ccceehhHHHHHHHHHHhhcccCCcch
Q psy17679 268 TDMVPVDLVVNSMISIAWSIGESGKVE 294 (303)
Q Consensus 268 ~~~i~v~D~a~ai~~~~~~~~~~~~~~ 294 (303)
.+.+.++++|.+.+.++.+|.-++.+.
T Consensus 244 ~ppvnve~VA~aal~ai~dp~f~Gvv~ 270 (283)
T KOG4288|consen 244 APPVNVESVALAALKAIEDPDFKGVVT 270 (283)
T ss_pred CCCcCHHHHHHHHHHhccCCCcCceee
Confidence 889999999999999999998887665
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.16 E-value=1e-09 Score=90.61 Aligned_cols=123 Identities=20% Similarity=0.287 Sum_probs=85.8
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC-CcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK-KGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~-~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
+++||||+|.+|..+++.|.++|. .+|+++.|+. ......+.++++... ..++.++.+|++|++
T Consensus 2 tylitGG~gglg~~la~~La~~~~--~~~il~~r~~~~~~~~~~~i~~l~~~-------------g~~v~~~~~Dv~d~~ 66 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGA--RRLILLGRSGAPSAEAEAAIRELESA-------------GARVEYVQCDVTDPE 66 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGSTTHHHHHHHHHHT-------------T-EEEEEE--TTSHH
T ss_pred EEEEECCccHHHHHHHHHHHHcCC--CEEEEeccCCCccHHHHHHHHHHHhC-------------CCceeeeccCccCHH
Confidence 589999999999999999999964 3699999983 333444455555443 268999999999987
Q ss_pred CCCCHHHHHHHhc-------cccEEEEcceeccc----c---ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy17679 125 LGLSETDRATLVK-------QVNIVFHGAATVRF----D---EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFT 190 (303)
Q Consensus 125 ~~~~~~~~~~~~~-------~~dvVi~~a~~~~~----~---~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~ 190 (303)
++.++++ .++.|||+|+.... . ..+...+..-+.+..+|.++.... ....||.+||..+
T Consensus 67 ------~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-~l~~~i~~SSis~ 139 (181)
T PF08659_consen 67 ------AVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-PLDFFILFSSISS 139 (181)
T ss_dssp ------HHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-TTSEEEEEEEHHH
T ss_pred ------HHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-CCCeEEEECChhH
Confidence 6777764 56899999998642 1 223456677788889998888886 8899999999954
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.14 E-value=9.3e-10 Score=119.91 Aligned_cols=176 Identities=15% Similarity=0.114 Sum_probs=112.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCCCccc---HH-----HHH-----HHHHH------------
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPKKGKD---IQ-----ERL-----DAIFE------------ 95 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~~~~~---~~-----~~l-----~~l~~------------ 95 (303)
.+++++|||||+|+||..+++.|.++ |+. |+++.|+..... .. ..+ +.+..
T Consensus 1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~ga~---viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~ 2071 (2582)
T TIGR02813 1995 NSDDVFLVTGGAKGVTFECALELAKQCQAH---FILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDA 2071 (2582)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHhcCCE---EEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhh
Confidence 35789999999999999999999998 465 888899731000 00 000 00000
Q ss_pred --------hHHHhhhhccCcCcCCceEEEEecCCCCCCCCCHHHHHHHhc------cccEEEEcceeccc-------ccc
Q psy17679 96 --------DRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVK------QVNIVFHGAATVRF-------DEH 154 (303)
Q Consensus 96 --------~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~------~~dvVi~~a~~~~~-------~~~ 154 (303)
..+...+.. ......++.++.+|++|.+ ++..+++ ++|.|||+||.... ...
T Consensus 2072 ~~~~~~~~~ei~~~la~-l~~~G~~v~y~~~DVtD~~------av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~ 2144 (2582)
T TIGR02813 2072 LVRPVLSSLEIAQALAA-FKAAGASAEYASADVTNSV------SVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEE 2144 (2582)
T ss_pred cccccchhHHHHHHHHH-HHhcCCcEEEEEccCCCHH------HHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHH
Confidence 000000000 0112357889999999977 4444443 58999999997532 234
Q ss_pred HHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---
Q psy17679 155 IKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV--- 231 (303)
Q Consensus 155 ~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--- 231 (303)
+..++++|+.|..++++++... ..++||++||..+.... .....|..+|.....+...+...+.
T Consensus 2145 f~~v~~~nv~G~~~Ll~al~~~-~~~~IV~~SSvag~~G~------------~gqs~YaaAkaaL~~la~~la~~~~~ir 2211 (2582)
T TIGR02813 2145 FNAVYGTKVDGLLSLLAALNAE-NIKLLALFSSAAGFYGN------------TGQSDYAMSNDILNKAALQLKALNPSAK 2211 (2582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCCC------------CCcHHHHHHHHHHHHHHHHHHHHcCCcE
Confidence 6789999999999999999876 66789999999654321 1234566677666666655543332
Q ss_pred -EEeecceec
Q psy17679 232 -HISGTGWID 240 (303)
Q Consensus 232 -~ii~pg~~~ 240 (303)
+.+.||...
T Consensus 2212 V~sI~wG~wd 2221 (2582)
T TIGR02813 2212 VMSFNWGPWD 2221 (2582)
T ss_pred EEEEECCeec
Confidence 566677543
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1207|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=7e-11 Score=93.56 Aligned_cols=205 Identities=16% Similarity=0.113 Sum_probs=129.1
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
-.+.++.|++||+.-+||+.+++.|.+.|.. |++++|++ +.+..+.. +....++.+++|
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~---ViAvaR~~------a~L~sLV~------------e~p~~I~Pi~~D 61 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQ---VIAVARNE------ANLLSLVK------------ETPSLIIPIVGD 61 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCCE---EEEEecCH------HHHHHHHh------------hCCcceeeeEec
Confidence 3567899999999999999999999999987 99999974 33433332 112458899999
Q ss_pred CCCCCCCCCHHHHHHHhc---cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEEEE
Q psy17679 120 CSLPGLGLSETDRATLVK---QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFVHV 185 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~---~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i~i 185 (303)
+++-+ .+.+++. .+|-++||||..-. .+++...|++|+.+...+.+... ..+....||++
T Consensus 62 ls~we------a~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNv 135 (245)
T KOG1207|consen 62 LSAWE------ALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNV 135 (245)
T ss_pred ccHHH------HHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEe
Confidence 99744 4555554 57999999998532 33456678889988777766633 32234569999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHhhhhh-
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIATGVLH- 258 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~~~~~- 258 (303)
||..... |...-..|-.+|...+.+.+.++...+ ..+.|.-+.+.+|...+-....++...
T Consensus 136 SSqas~R------------~~~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~ 203 (245)
T KOG1207|consen 136 SSQASIR------------PLDNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLD 203 (245)
T ss_pred cchhccc------------ccCCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhh
Confidence 9985542 333333455556666666666555544 222343333334332221111111111
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.++ .--|..++.+++++..++.+.+
T Consensus 204 riP-----l~rFaEV~eVVnA~lfLLSd~s 228 (245)
T KOG1207|consen 204 RIP-----LKRFAEVDEVVNAVLFLLSDNS 228 (245)
T ss_pred hCc-----hhhhhHHHHHHhhheeeeecCc
Confidence 111 1236789999999998887654
|
|
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.5e-09 Score=92.70 Aligned_cols=162 Identities=14% Similarity=0.114 Sum_probs=105.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
++|+|||++..+|..++..+..+|.. |+++.|+.++.....+.-++. .....+.+.-+|+.|-+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~---Vti~ar~~~kl~~a~~~l~l~-------------~~~~~v~~~S~d~~~Y~ 97 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGAD---VTITARSGKKLLEAKAELELL-------------TQVEDVSYKSVDVIDYD 97 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCc---eEEEeccHHHHHHHHhhhhhh-------------hccceeeEeccccccHH
Confidence 69999999999999999999999998 999999865332111111110 01134678889996655
Q ss_pred CCCCHHHHHHHhc-------cccEEEEcceecc--c-----cccHHHHHhhhHHHHHHHHHHHHhc-CCCc---eEEEEe
Q psy17679 125 LGLSETDRATLVK-------QVNIVFHGAATVR--F-----DEHIKMAVKINVCGVQAMLQLAREM-KDLK---AFVHVS 186 (303)
Q Consensus 125 ~~~~~~~~~~~~~-------~~dvVi~~a~~~~--~-----~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~---r~i~iS 186 (303)
++..+++ -+|.+|+|||..= . .+..+..+++|..++.++++++... +... +|+.+|
T Consensus 98 ------~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vs 171 (331)
T KOG1210|consen 98 ------SVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVS 171 (331)
T ss_pred ------HHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEeh
Confidence 4444444 5799999999742 1 2234678899999999999887654 2223 899999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHH-HHHHHHHHHHhhCcCCc--EEeecc
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQL-ISETGDEELSEMTPNRV--HISGTG 237 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~-~k~~~E~~~~~~~~~~~--~ii~pg 237 (303)
|..+.... ...++|+..|. .|.+++.+.++....+. +.+-|+
T Consensus 172 S~~a~~~i---------~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~ 216 (331)
T KOG1210|consen 172 SQLAMLGI---------YGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPP 216 (331)
T ss_pred hhhhhcCc---------ccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCC
Confidence 99554321 12233433332 26666777777665555 334454
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.3e-09 Score=96.85 Aligned_cols=227 Identities=10% Similarity=0.022 Sum_probs=117.5
Q ss_pred ccCCcEEEEeCCc--chhHHHHHHHHHhcCCCccEEEEEeCCCCcccH-----HHHHHH--HHHhHH---HhhhhccCcC
Q psy17679 41 FYRDKTIFLTGGT--GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDI-----QERLDA--IFEDRL---FWRLRAEVPD 108 (303)
Q Consensus 41 ~~~~~~vlItGat--G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~-----~~~l~~--l~~~~~---~~~~~~~~~~ 108 (303)
.+++|+++||||+ .+||+++++.|.++|+. |++.+|.+..... ..+..+ ....+. ..+..... .
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~---Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~ 80 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGAT---ILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMD-A 80 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCE---EEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhh-h
Confidence 4578999999995 89999999999999998 6665543200000 000000 000000 00000000 0
Q ss_pred cCCceEEEEecCCCCC--CCCCHHHHHHH-------hccccEEEEcceecc-----c----cccHHHHHhhhHHHHHHHH
Q psy17679 109 FRSKVSAVAGDCSLPG--LGLSETDRATL-------VKQVNIVFHGAATVR-----F----DEHIKMAVKINVCGVQAML 170 (303)
Q Consensus 109 ~~~~v~~~~~Dl~d~~--~~~~~~~~~~~-------~~~~dvVi~~a~~~~-----~----~~~~~~~~~~N~~~~~~ll 170 (303)
.....+-+..|+.+.. -..+..++..+ +.++|++|||||... + ...+...+++|+.+...+.
T Consensus 81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~ 160 (299)
T PRK06300 81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL 160 (299)
T ss_pred hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence 0011122223333210 00011112222 237999999997532 1 2345778899999999998
Q ss_pred HHHHhc-CCCceEEEEeCCcccCCCCccccCCCCCCCChh-hHHHHHHHHHHHHHHhhCc----C-Cc--EEeecceecC
Q psy17679 171 QLAREM-KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYE-NLIQLISETGDEELSEMTP----N-RV--HISGTGWIDN 241 (303)
Q Consensus 171 ~~a~~~-~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~-~~~~~~k~~~E~~~~~~~~----~-~~--~ii~pg~~~~ 241 (303)
+++.+. ....++|++||..+.... | .+ ..|..+|...+.+.+.+.. . .. +.+.||.+.+
T Consensus 161 ~a~~p~m~~~G~ii~iss~~~~~~~----------p--~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T 228 (299)
T PRK06300 161 SHFGPIMNPGGSTISLTYLASMRAV----------P--GYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLAS 228 (299)
T ss_pred HHHHHHhhcCCeEEEEeehhhcCcC----------C--CccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccC
Confidence 888764 123579999987543211 1 12 2577777777776665543 2 22 6777987654
Q ss_pred ccChHH-HHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 242 VYGPIG-MLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 242 ~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...... .............+ ...+...+|++.++++++....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~p-----~~r~~~peevA~~v~~L~s~~~ 271 (299)
T PRK06300 229 RAGKAIGFIERMVDYYQDWAP-----LPEPMEAEQVGAAAAFLVSPLA 271 (299)
T ss_pred hhhhcccccHHHHHHHHhcCC-----CCCCcCHHHHHHHHHHHhCccc
Confidence 432110 00000000000011 1124678999999999887543
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.3e-09 Score=94.00 Aligned_cols=188 Identities=11% Similarity=0.009 Sum_probs=116.8
Q ss_pred HHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCCCCHHHHHHHhc--
Q psy17679 60 VVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVK-- 137 (303)
Q Consensus 60 l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~-- 137 (303)
+++.|+++|++ |++++|+.... ....++.+|+++.+ ++..+++
T Consensus 1 ~a~~l~~~G~~---Vv~~~r~~~~~--------------------------~~~~~~~~Dl~~~~------~v~~~~~~~ 45 (241)
T PRK12428 1 TARLLRFLGAR---VIGVDRREPGM--------------------------TLDGFIQADLGDPA------SIDAAVAAL 45 (241)
T ss_pred ChHHHHhCCCE---EEEEeCCcchh--------------------------hhhHhhcccCCCHH------HHHHHHHHh
Confidence 46889999987 88889975421 01235789999876 5665554
Q ss_pred --cccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeCCcccCCCC--ccccC----C--C----
Q psy17679 138 --QVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVSTAFTHCPRE--RIDEE----F--Y---- 202 (303)
Q Consensus 138 --~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS~~~~~~~~--~~~E~----~--~---- 202 (303)
++|+||||||... ...+...+++|+.++..+++.+.+. ....+||++||..+..... +..+. . .
T Consensus 46 ~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (241)
T PRK12428 46 PGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAA 124 (241)
T ss_pred cCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHH
Confidence 6899999999753 3457889999999999999998764 1236999999995543111 00000 0 0
Q ss_pred ---CCCCChhhHHHHHHHHHHHHHHhhC-cCC---c---EEeecceecCccChHHHHHHHHhhhhhhccCCCCcccccee
Q psy17679 203 ---PVPLKYENLIQLISETGDEELSEMT-PNR---V---HISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVP 272 (303)
Q Consensus 203 ---~~~~~~~~~~~~~k~~~E~~~~~~~-~~~---~---~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 272 (303)
..|......|..+|...+.+.+.+. ..+ + +.+.||++.+...... ............. .....+..
T Consensus 125 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~---~~~~~~~~ 200 (241)
T PRK12428 125 WLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDF-RSMLGQERVDSDA---KRMGRPAT 200 (241)
T ss_pred hhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccc-hhhhhhHhhhhcc---cccCCCCC
Confidence 0234455678888888888777665 222 2 6788997755442210 0000000000000 01122567
Q ss_pred hhHHHHHHHHHHhhc
Q psy17679 273 VDLVVNSMISIAWSI 287 (303)
Q Consensus 273 v~D~a~ai~~~~~~~ 287 (303)
.+|+|++++.++..+
T Consensus 201 pe~va~~~~~l~s~~ 215 (241)
T PRK12428 201 ADEQAAVLVFLCSDA 215 (241)
T ss_pred HHHHHHHHHHHcChh
Confidence 899999999988644
|
|
| >KOG1014|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=7.3e-09 Score=89.88 Aligned_cols=155 Identities=14% Similarity=0.145 Sum_probs=106.6
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
+=.+|||||.+||++.+++|.++|.. |++++|+.+ +|++..+.- .+ .....+.++..|.++.+
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~n---vvLIsRt~~------KL~~v~kEI-----~~---~~~vev~~i~~Dft~~~ 112 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFN---VVLISRTQE------KLEAVAKEI-----EE---KYKVEVRIIAIDFTKGD 112 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCE---EEEEeCCHH------HHHHHHHHH-----HH---HhCcEEEEEEEecCCCc
Confidence 67899999999999999999999998 999999854 333322210 00 01146888999999887
Q ss_pred CCCCHHHHHHHhc--cccEEEEcceeccccc---------cHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCCcc
Q psy17679 125 LGLSETDRATLVK--QVNIVFHGAATVRFDE---------HIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTAFT 190 (303)
Q Consensus 125 ~~~~~~~~~~~~~--~~dvVi~~a~~~~~~~---------~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~~~ 190 (303)
. .-+.+...+. .+.++|||+|.....+ .....+.+|+.++..+.+..... ++..-||++||..+
T Consensus 113 ~--~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag 190 (312)
T KOG1014|consen 113 E--VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAG 190 (312)
T ss_pred h--hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccc
Confidence 2 2223444444 5669999999865221 12455667888877777776654 24456999999976
Q ss_pred cCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC
Q psy17679 191 HCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR 230 (303)
Q Consensus 191 ~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~ 230 (303)
. .|.+.++.|.++|...+.+.+.+...+
T Consensus 191 ~------------~p~p~~s~ysasK~~v~~~S~~L~~Ey 218 (312)
T KOG1014|consen 191 L------------IPTPLLSVYSASKAFVDFFSRCLQKEY 218 (312)
T ss_pred c------------ccChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 356678888888877776666554443
|
|
| >KOG3019|consensus | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.6e-08 Score=81.56 Aligned_cols=215 Identities=8% Similarity=-0.020 Sum_probs=123.0
Q ss_pred cccCCcEEEEeCCcchhHHHHHH-----HHHhcC-CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCce
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVE-----KLLRSC-PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKV 113 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~-----~Ll~~g-~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v 113 (303)
++-+.++.++-+++|+++..|.. .+-..+ .+.+.|++++|++.. .++
T Consensus 8 ~~~~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~---------------------------~ri 60 (315)
T KOG3019|consen 8 NSGKSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGK---------------------------ARI 60 (315)
T ss_pred cCCccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCC---------------------------ccc
Confidence 33445677888899999987766 332223 011239999998752 355
Q ss_pred EEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccc--cccHHHHHhhh-----HHHHHHHHHHHHhcCC-CceEEEE
Q psy17679 114 SAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRF--DEHIKMAVKIN-----VCGVQAMLQLAREMKD-LKAFVHV 185 (303)
Q Consensus 114 ~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~--~~~~~~~~~~N-----~~~~~~ll~~a~~~~~-~~r~i~i 185 (303)
++.+.|..-.. -.|+.+++.+|.... ...|...|+-+ +..+..|.+++..+.. .+.+|.+
T Consensus 61 tw~el~~~Gip------------~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv 128 (315)
T KOG3019|consen 61 TWPELDFPGIP------------ISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLV 128 (315)
T ss_pred ccchhcCCCCc------------eehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEE
Confidence 55555543221 134555555554221 12233333434 4457788888887743 3468888
Q ss_pred eCC--cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc-EEeecceecCcc-ChHHHHHHHHhhhhhhcc
Q psy17679 186 STA--FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV-HISGTGWIDNVY-GPIGMLVGIATGVLHTHL 261 (303)
Q Consensus 186 SS~--~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~-~ii~pg~~~~~~-g~~~~~~~~~~~~~~~~~ 261 (303)
|.. |.......++|++.....+..+. -+.+| |.......+... .++|-|-+-+-- |...++..-+.-.....+
T Consensus 129 ~gva~y~pS~s~eY~e~~~~qgfd~~sr-L~l~W--E~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPl 205 (315)
T KOG3019|consen 129 SGVAVYVPSESQEYSEKIVHQGFDILSR-LCLEW--EGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPL 205 (315)
T ss_pred EeeEEeccccccccccccccCChHHHHH-HHHHH--HHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcC
Confidence 877 44434456888765555443332 22344 333333333322 566654332211 112222222222222346
Q ss_pred CCCCccccceehhHHHHHHHHHHhhcccCCcchhh
Q psy17679 262 INLNTVTDMVPVDLVVNSMISIAWSIGESGKVEKA 296 (303)
Q Consensus 262 ~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~~~~ 296 (303)
|.|++.++|||++|+|..+..+++++..++.++.+
T Consensus 206 GsG~Q~fpWIHv~DL~~li~~ale~~~v~GViNgv 240 (315)
T KOG3019|consen 206 GSGQQWFPWIHVDDLVNLIYEALENPSVKGVINGV 240 (315)
T ss_pred CCCCeeeeeeehHHHHHHHHHHHhcCCCCceeccc
Confidence 88999999999999999999999999988887655
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.1e-07 Score=77.40 Aligned_cols=85 Identities=16% Similarity=0.257 Sum_probs=60.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++||||+|+||..++..|.+.|+. |+++.|+.... .+..+++.. ....+.++.+|++
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~---V~l~~r~~~~~--~~~~~~l~~-------------~~~~~~~~~~Dl~ 75 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAK---VIVTDIDQESG--QATVEEITN-------------LGGEALFVSYDME 75 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCE---EEEEECCHHHH--HHHHHHHHh-------------cCCcEEEEEccCC
Confidence 56799999999999999999999999987 88888864311 111111111 0145678899999
Q ss_pred CCCCCCCHHHHHHH-------hccccEEEEcceecc
Q psy17679 122 LPGLGLSETDRATL-------VKQVNIVFHGAATVR 150 (303)
Q Consensus 122 d~~~~~~~~~~~~~-------~~~~dvVi~~a~~~~ 150 (303)
+.. ++.++ +.++|++|||||...
T Consensus 76 ~~~------~v~~~v~~~~~~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 76 KQG------DWQRVISITLNAFSRIDMLFQNAGLYK 105 (169)
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 865 34443 237999999999743
|
|
| >KOG1478|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.8e-07 Score=77.58 Aligned_cols=184 Identities=14% Similarity=0.086 Sum_probs=107.9
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCc--cEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHL--KHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v--~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
..|.++|||++.++|.+||.+|++...+. -.|...+|+-+++ ++...+++. .-|+...+++++++|+
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~ka--e~vc~~lk~---------f~p~~~i~~~yvlvD~ 70 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKA--EAVCAALKA---------FHPKSTIEVTYVLVDV 70 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHH--HHHHHHHHH---------hCCCceeEEEEEEEeh
Confidence 45789999999999999999999986552 2455667775533 222233322 1122236888999999
Q ss_pred CCCCCCC-CHHHHHHHhccccEEEEcceecccc----------------------------------ccHHHHHhhhHHH
Q psy17679 121 SLPGLGL-SETDRATLVKQVNIVFHGAATVRFD----------------------------------EHIKMAVKINVCG 165 (303)
Q Consensus 121 ~d~~~~~-~~~~~~~~~~~~dvVi~~a~~~~~~----------------------------------~~~~~~~~~N~~~ 165 (303)
+.-.+.+ ...++..-+...|.|+-|||..... .....+|++|+.|
T Consensus 71 sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFG 150 (341)
T KOG1478|consen 71 SNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFG 150 (341)
T ss_pred hhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccc
Confidence 9865110 0011222234789999999985321 1224688899999
Q ss_pred HHHHHHHHHhc---CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeec
Q psy17679 166 VQAMLQLAREM---KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGT 236 (303)
Q Consensus 166 ~~~ll~~a~~~---~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~p 236 (303)
.--++..+.+. +....+|++||..+....-.+.+=.......||+. +|...+-+-.+..+++. .++.|
T Consensus 151 hfyli~~l~pll~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~s---SKrl~DlLh~A~~~~~~~~g~~qyvv~p 227 (341)
T KOG1478|consen 151 HFYLIRELEPLLCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSS---SKRLTDLLHVALNRNFKPLGINQYVVQP 227 (341)
T ss_pred hhhhHhhhhhHhhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcch---hHHHHHHHHHHHhccccccchhhhcccC
Confidence 87776655443 24558999999955433211111112234445554 34444444433333332 56778
Q ss_pred ceec
Q psy17679 237 GWID 240 (303)
Q Consensus 237 g~~~ 240 (303)
|.+.
T Consensus 228 g~~t 231 (341)
T KOG1478|consen 228 GIFT 231 (341)
T ss_pred ceee
Confidence 8653
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.8e-07 Score=82.41 Aligned_cols=120 Identities=13% Similarity=0.052 Sum_probs=88.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
.+++||.|+|++|.+|+.++..|...+. ...+.++++......+.+ +.+ ... .....+.+
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~-~~elvL~Di~~~~g~a~D-l~~----------------~~~--~~~v~~~t 65 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPH-VSELSLYDIVGAPGVAAD-LSH----------------IDT--PAKVTGYA 65 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCC-CCEEEEEecCCCcccccc-hhh----------------cCc--CceEEEec
Confidence 4667999999999999999999986643 234888888321111111 100 011 23445666
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
++. ++...++++|+||+++|.... ..++...+..|+..+.++++.+.+. +++++|+++|.
T Consensus 66 d~~------~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SN 126 (321)
T PTZ00325 66 DGE------LWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSN 126 (321)
T ss_pred CCC------chHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecC
Confidence 644 456788999999999998653 4567889999999999999999999 99999999998
|
|
| >KOG1204|consensus | Back alignment and domain information |
|---|
Probab=98.64 E-value=4e-07 Score=75.60 Aligned_cols=201 Identities=14% Similarity=0.078 Sum_probs=121.2
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
..+.+|+||++.+||.-++..+.+++.+. -+++..|.... ..++.+-.+|...
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~-~r~g~~r~~a~--------------------------~~~L~v~~gd~~v 57 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEA-LRYGVARLLAE--------------------------LEGLKVAYGDDFV 57 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHH-HHHhhhccccc--------------------------ccceEEEecCCcc
Confidence 45789999999999999999998886552 13333333211 1344444444332
Q ss_pred CCCCC-CH----HHHHHHhc----cccEEEEcceeccc----------cccHHHHHhhhHHHHHHHHHHHHhc-CC---C
Q psy17679 123 PGLGL-SE----TDRATLVK----QVNIVFHGAATVRF----------DEHIKMAVKINVCGVQAMLQLAREM-KD---L 179 (303)
Q Consensus 123 ~~~~~-~~----~~~~~~~~----~~dvVi~~a~~~~~----------~~~~~~~~~~N~~~~~~ll~~a~~~-~~---~ 179 (303)
...+. .. .++.++.+ +.|+||||||.... ...|..+++.|+.+...|...+.+. .+ .
T Consensus 58 ~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~ 137 (253)
T KOG1204|consen 58 HVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVN 137 (253)
T ss_pred eechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCcc
Confidence 22110 00 11122221 67999999998532 2346789999999988887766543 11 3
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhC-cCC-c---EEeecceecCccChHH-----HH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMT-PNR-V---HISGTGWIDNVYGPIG-----ML 249 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~-~~~-~---~ii~pg~~~~~~g~~~-----~~ 249 (303)
+.+|++||.... .|.+..+.|-.+|..-+.++..++ +.. . ..+.||.+.+..+-.. +-
T Consensus 138 ~~vVnvSS~aav------------~p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~ 205 (253)
T KOG1204|consen 138 GNVVNVSSLAAV------------RPFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMT 205 (253)
T ss_pred CeEEEecchhhh------------ccccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCC
Confidence 678999999543 467788888888998889888764 332 2 5666987765553211 00
Q ss_pred HHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 250 VGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...... +..+. ..-..++..+.++.+..++.+.
T Consensus 206 p~~l~~-f~el~----~~~~ll~~~~~a~~l~~L~e~~ 238 (253)
T KOG1204|consen 206 PADLKM-FKELK----ESGQLLDPQVTAKVLAKLLEKG 238 (253)
T ss_pred HHHHHH-HHHHH----hcCCcCChhhHHHHHHHHHHhc
Confidence 111111 11111 1112466777888888877766
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.59 E-value=7.4e-07 Score=79.79 Aligned_cols=120 Identities=12% Similarity=0.055 Sum_probs=86.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
...+||.|+|++|.+|++++..|...+. ...+.++++.+....+.+ +. +.... ....++.
T Consensus 16 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~-~~el~L~Di~~~~g~a~D-l~----------------~~~~~--~~i~~~~ 75 (323)
T PLN00106 16 APGFKVAVLGAAGGIGQPLSLLMKMNPL-VSELHLYDIANTPGVAAD-VS----------------HINTP--AQVRGFL 75 (323)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCC-CCEEEEEecCCCCeeEch-hh----------------hCCcC--ceEEEEe
Confidence 3447999999999999999999987643 235888888662111111 10 00111 2333433
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
+.. ++...++++|+|||+||.... ..++.+.+..|+...+.+.+.+.+. +..++|+++|-
T Consensus 76 ~~~------d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aivivvSN 136 (323)
T PLN00106 76 GDD------QLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNIISN 136 (323)
T ss_pred CCC------CHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCC
Confidence 333 477889999999999998654 5678889999999999999999999 78888888887
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.3e-07 Score=76.08 Aligned_cols=103 Identities=17% Similarity=0.240 Sum_probs=70.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+++|||||||+|. ++..|.+.|++ |.+++|++. ..+.+... +. ...++.++.+|+.|.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~---V~v~~R~~~------~~~~l~~~-----l~-----~~~~i~~~~~Dv~d~~ 60 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFH---VSVIARREV------KLENVKRE-----ST-----TPESITPLPLDYHDDD 60 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCE---EEEEECCHH------HHHHHHHH-----hh-----cCCcEEEEEccCCCHH
Confidence 57999999998876 99999999997 888888642 12221110 00 0146788999999977
Q ss_pred CCCCHHHHHHHhc-------cccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCc----eEEEEeCCc
Q psy17679 125 LGLSETDRATLVK-------QVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLK----AFVHVSTAF 189 (303)
Q Consensus 125 ~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~----r~i~iSS~~ 189 (303)
++..+++ .+|++|+. +++.++.++..+|.+. +++ ||+|+=.+.
T Consensus 61 ------sv~~~i~~~l~~~g~id~lv~~---------------vh~~~~~~~~~~~~~~-gv~~~~~~~~h~~gs~ 114 (177)
T PRK08309 61 ------ALKLAIKSTIEKNGPFDLAVAW---------------IHSSAKDALSVVCREL-DGSSETYRLFHVLGSA 114 (177)
T ss_pred ------HHHHHHHHHHHHcCCCeEEEEe---------------ccccchhhHHHHHHHH-ccCCCCceEEEEeCCc
Confidence 5555554 35566533 2444567889999998 777 888886553
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.56 E-value=8.9e-07 Score=79.64 Aligned_cols=123 Identities=14% Similarity=0.084 Sum_probs=77.8
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCC----CccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCP----HLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~----~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
..||+||||+|++|++++..|+..+. .-..|.++++++..........++ . .-......|
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl---------~-------d~~~~~~~~ 65 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMEL---------Q-------DCAFPLLKS 65 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeeh---------h-------hccccccCC
Confidence 45799999999999999999988642 012488899865311000000000 0 000011223
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcC-CCceEEEEeCC
Q psy17679 120 CSLPGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMK-DLKAFVHVSTA 188 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~-~~~r~i~iSS~ 188 (303)
+.... ++...++++|+|||+||.... ..+....++.|+.-.+.+...+.+.. ....+|.+|..
T Consensus 66 ~~~~~------~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNP 130 (325)
T cd01336 66 VVATT------DPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNP 130 (325)
T ss_pred ceecC------CHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCc
Confidence 32222 466788999999999998654 44567889999998899988888772 23446666653
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1199|consensus | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.6e-07 Score=72.00 Aligned_cols=209 Identities=12% Similarity=0.125 Sum_probs=124.1
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
..++-..+||||...+|..-++.|...|.+ |.+++-..++-....+ +...++.|...|+
T Consensus 6 s~kglvalvtggasglg~ataerlakqgas---v~lldlp~skg~~vak------------------elg~~~vf~padv 64 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGAS---VALLDLPQSKGADVAK------------------ELGGKVVFTPADV 64 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCce---EEEEeCCcccchHHHH------------------HhCCceEEecccc
Confidence 356678899999999999999999999988 8888877654332211 1246899999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------------cccHHHHHhhhHHHHHHHHHHHHhc----
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------------DEHIKMAVKINVCGVQAMLQLAREM---- 176 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------------~~~~~~~~~~N~~~~~~ll~~a~~~---- 176 (303)
++.. ++..++. +.|+.+||||..-. .+++..++++|+.|+.++++.....
T Consensus 65 tsek------dv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~n 138 (260)
T KOG1199|consen 65 TSEK------DVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGEN 138 (260)
T ss_pred CcHH------HHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCC
Confidence 9865 4544433 78999999998421 2334567788999999988765422
Q ss_pred ---CCCce--EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHH----HHHHHHHhhCcCCc--EEeecceecCccCh
Q psy17679 177 ---KDLKA--FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISE----TGDEELSEMTPNRV--HISGTGWIDNVYGP 245 (303)
Q Consensus 177 ---~~~~r--~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~----~~E~~~~~~~~~~~--~ii~pg~~~~~~g~ 245 (303)
++-+| +|++.|...+.... .-..|..+|. +.--+.+.+..... +.|.||.+.+..-.
T Consensus 139 epdq~gqrgviintasvaafdgq~------------gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tplls 206 (260)
T KOG1199|consen 139 EPDQNGQRGVIINTASVAAFDGQT------------GQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLS 206 (260)
T ss_pred CCCCCCcceEEEeeceeeeecCcc------------chhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhh
Confidence 23345 44444443332110 1122333332 12234555555554 56668876544421
Q ss_pred H--HHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcccCCcchh
Q psy17679 246 I--GMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGESGKVEK 295 (303)
Q Consensus 246 ~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~~~ 295 (303)
. .-+..++... ...+ ...-|..+.+..+..++++|--.+.+-+
T Consensus 207 slpekv~~fla~~----ipfp---srlg~p~eyahlvqaiienp~lngevir 251 (260)
T KOG1199|consen 207 SLPEKVKSFLAQL----IPFP---SRLGHPHEYAHLVQAIIENPYLNGEVIR 251 (260)
T ss_pred hhhHHHHHHHHHh----CCCc---hhcCChHHHHHHHHHHHhCcccCCeEEE
Confidence 1 1111111111 1111 1234667777777888888766555443
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=6.2e-07 Score=76.50 Aligned_cols=84 Identities=19% Similarity=0.333 Sum_probs=54.7
Q ss_pred cCCcEEEEeCCc----------------chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhcc
Q psy17679 42 YRDKTIFLTGGT----------------GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAE 105 (303)
Q Consensus 42 ~~~~~vlItGat----------------G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~ 105 (303)
+++|+||||+|- ||+|+++++.|+++|++ |+++++..+... . .
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~---V~li~g~~~~~~--~----------------~ 59 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAH---VIYLHGYFAEKP--N----------------D 59 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCe---EEEEeCCCcCCC--c----------------c
Confidence 467999999885 99999999999999998 776665322100 0 0
Q ss_pred CcCcCCceEEEEecCCCCCCCCCHHHHHHHhc--cccEEEEcceeccccc
Q psy17679 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVK--QVNIVFHGAATVRFDE 153 (303)
Q Consensus 106 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~~~ 153 (303)
.+ ....+..+.++..... .+..++. ++|+|||+|+..++..
T Consensus 60 ~~-~~~~~~~V~s~~d~~~------~l~~~~~~~~~D~VIH~AAvsD~~~ 102 (229)
T PRK09620 60 IN-NQLELHPFEGIIDLQD------KMKSIITHEKVDAVIMAAAGSDWVV 102 (229)
T ss_pred cC-CceeEEEEecHHHHHH------HHHHHhcccCCCEEEECccccceec
Confidence 00 0123334555222212 4666664 6899999999987654
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.9e-06 Score=78.35 Aligned_cols=78 Identities=23% Similarity=0.262 Sum_probs=62.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+|+|.|+ |++|+.++..|.++|. .+|++.+|+..++.... . ....++++++.|+.+.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d--~~V~iAdRs~~~~~~i~------~------------~~~~~v~~~~vD~~d~ 59 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGD--GEVTIADRSKEKCARIA------E------------LIGGKVEALQVDAADV 59 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCC--ceEEEEeCCHHHHHHHH------h------------hccccceeEEecccCh
Confidence 578999997 9999999999999973 34999999865332111 1 1124899999999998
Q ss_pred CCCCCHHHHHHHhccccEEEEccee
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAAT 148 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~ 148 (303)
+ ++.+++++.|+|||++..
T Consensus 60 ~------al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 60 D------ALVALIKDFDLVINAAPP 78 (389)
T ss_pred H------HHHHHHhcCCEEEEeCCc
Confidence 7 789999999999999886
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.4e-05 Score=71.65 Aligned_cols=118 Identities=14% Similarity=0.113 Sum_probs=78.1
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||+|+||+|.+|++++..|.........+.+++|++. ... ..+ ++ . . ......+.+ .+.+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g-~al-Dl---------~----~-~~~~~~i~~--~~~~ 61 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPG-VAV-DL---------S----H-IPTAVKIKG--FSGE 61 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Ccc-eeh-hh---------h----c-CCCCceEEE--eCCC
Confidence 68999999999999999988553111234777787643 110 000 00 0 0 011112233 1111
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
++...++++|+||.++|.... ..+...++..|......+++.+.+. +.+++|.+.|-
T Consensus 62 ------d~~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvsN 119 (312)
T PRK05086 62 ------DPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGIITN 119 (312)
T ss_pred ------CHHHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccC
Confidence 355677899999999998543 4456788899999999999999998 78888877776
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.25 E-value=5.3e-06 Score=70.93 Aligned_cols=80 Identities=18% Similarity=0.190 Sum_probs=51.3
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
..-|++=-.+|||+|+++++.|+++|++ |+++.|...... ....++.++.++..+
T Consensus 15 D~VR~itN~SSG~iG~aLA~~L~~~G~~---V~li~r~~~~~~----------------------~~~~~v~~i~v~s~~ 69 (229)
T PRK06732 15 DSVRGITNHSTGQLGKIIAETFLAAGHE---VTLVTTKTAVKP----------------------EPHPNLSIIEIENVD 69 (229)
T ss_pred CCceeecCccchHHHHHHHHHHHhCCCE---EEEEECcccccC----------------------CCCCCeEEEEEecHH
Confidence 3344444456899999999999999998 888887532100 001356666654322
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccc
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRF 151 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~ 151 (303)
.. ...+...++++|+|||+||..++
T Consensus 70 ~m----~~~l~~~~~~~DivIh~AAvsd~ 94 (229)
T PRK06732 70 DL----LETLEPLVKDHDVLIHSMAVSDY 94 (229)
T ss_pred HH----HHHHHHHhcCCCEEEeCCccCCc
Confidence 10 11344566789999999998764
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.0001 Score=61.59 Aligned_cols=154 Identities=10% Similarity=0.149 Sum_probs=94.9
Q ss_pred ccCCcEEEEeCCc--chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGGT--GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGat--G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+++|++||+|-. ..|+..|++.|.+.|.+ +.....++ ....+++++.+. .....+++|
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAe---L~fTy~~e---~l~krv~~la~~-------------~~s~~v~~c 63 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAE---LAFTYQGE---RLEKRVEELAEE-------------LGSDLVLPC 63 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCE---EEEEeccH---HHHHHHHHHHhh-------------ccCCeEEec
Confidence 4789999999976 67999999999999998 54444433 234444444332 123457899
Q ss_pred cCCCCCCCCCHHHHHHHhc-------cccEEEEcceecccc---c--------cHHHHHhhhHHHHHHHHHHHHhc-CCC
Q psy17679 119 DCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRFD---E--------HIKMAVKINVCGVQAMLQLAREM-KDL 179 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~---~--------~~~~~~~~N~~~~~~ll~~a~~~-~~~ 179 (303)
|+++.+ ++..+++ +.|.++|+.+..+-+ . .+....++..-+...+.++++.. .+.
T Consensus 64 DV~~d~------~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~g 137 (259)
T COG0623 64 DVTNDE------SIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNG 137 (259)
T ss_pred CCCCHH------HHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCC
Confidence 999877 4555544 789999999986521 1 12223333344445555555554 122
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV 231 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~ 231 (303)
..+|-++= ++.. +..+.|+.-...|...|.-.+.++...+
T Consensus 138 gSiltLtY-lgs~-----------r~vPnYNvMGvAKAaLEasvRyLA~dlG 177 (259)
T COG0623 138 GSILTLTY-LGSE-----------RVVPNYNVMGVAKAALEASVRYLAADLG 177 (259)
T ss_pred CcEEEEEe-ccce-----------eecCCCchhHHHHHHHHHHHHHHHHHhC
Confidence 23332211 1110 2345677777788888888877766655
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.10 E-value=5e-05 Score=68.24 Aligned_cols=116 Identities=15% Similarity=0.080 Sum_probs=78.3
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCC----ccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPH----LKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~----v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
||.|+||+|.+|++++..|...|.- ...+..+++++.. +.......|+.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~---------------------------~~~~g~~~Dl~ 54 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM---------------------------KALEGVVMELQ 54 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc---------------------------Cccceeeeehh
Confidence 6999999999999999999876431 1137788886420 12233444544
Q ss_pred CCCCCCCH-----HHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcC-CCceEEEEeCC
Q psy17679 122 LPGLGLSE-----TDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMK-DLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~-----~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~-~~~r~i~iSS~ 188 (303)
|....+.. ......++++|+|||+||.... ..+..+.+..|+.-.+.+...+.+.. ....+|.+|..
T Consensus 55 d~~~~~~~~~~i~~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNP 128 (323)
T cd00704 55 DCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNP 128 (323)
T ss_pred hhcccccCCcEEecChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 43200000 1345777899999999998643 45677889999999999999988872 34456666543
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.9e-05 Score=72.90 Aligned_cols=77 Identities=18% Similarity=0.227 Sum_probs=56.2
Q ss_pred ccCCcEEEEeCC----------------cchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhc
Q psy17679 41 FYRDKTIFLTGG----------------TGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104 (303)
Q Consensus 41 ~~~~~~vlItGa----------------tG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~ 104 (303)
.+++|+|+|||| +|.+|.++++.|.++|.+ |+++.++.+...
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~---V~~v~~~~~~~~------------------- 242 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGAD---VTLVSGPVNLPT------------------- 242 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCE---EEEeCCCccccC-------------------
Confidence 367899999999 899999999999999998 888877642100
Q ss_pred cCcCcCCceEEEEecCCCCCCCCCHHHHHHH----hccccEEEEcceecccc
Q psy17679 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATL----VKQVNIVFHGAATVRFD 152 (303)
Q Consensus 105 ~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~----~~~~dvVi~~a~~~~~~ 152 (303)
... +...|+.+.. ++..+ +.++|++||+||..++.
T Consensus 243 -----~~~--~~~~dv~~~~------~~~~~v~~~~~~~DilI~~Aav~d~~ 281 (399)
T PRK05579 243 -----PAG--VKRIDVESAQ------EMLDAVLAALPQADIFIMAAAVADYR 281 (399)
T ss_pred -----CCC--cEEEccCCHH------HHHHHHHHhcCCCCEEEEcccccccc
Confidence 012 3456777654 34433 34799999999987653
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.96 E-value=5.6e-05 Score=62.97 Aligned_cols=82 Identities=29% Similarity=0.358 Sum_probs=56.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++|+||+|.+|+.++..|.+.|++ |+++.|+.. +++++... +.. ..+.....+|..
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~---V~l~~R~~~------~~~~l~~~-----l~~-----~~~~~~~~~~~~ 86 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGAR---VVLVGRDLE------RAQKAADS-----LRA-----RFGEGVGAVETS 86 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEcCCHH------HHHHHHHH-----HHh-----hcCCcEEEeeCC
Confidence 46789999999999999999999998875 888888632 22222111 000 013345566766
Q ss_pred CCCCCCCHHHHHHHhccccEEEEccee
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAAT 148 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~ 148 (303)
+.+ ++...+.++|+||++.+.
T Consensus 87 ~~~------~~~~~~~~~diVi~at~~ 107 (194)
T cd01078 87 DDA------ARAAAIKGADVVFAAGAA 107 (194)
T ss_pred CHH------HHHHHHhcCCEEEECCCC
Confidence 644 567788899999998764
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=4.2e-05 Score=69.55 Aligned_cols=84 Identities=14% Similarity=0.190 Sum_probs=55.9
Q ss_pred CcEEEEeCCcchhHHH--HHHHHHhcCCCccEEEEEeCCCCccc---------HHHHHHHHHHhHHHhhhhccCcCcCCc
Q psy17679 44 DKTIFLTGGTGFMGKT--VVEKLLRSCPHLKHIYLLVRPKKGKD---------IQERLDAIFEDRLFWRLRAEVPDFRSK 112 (303)
Q Consensus 44 ~~~vlItGatG~iG~~--l~~~Ll~~g~~v~~V~~~~R~~~~~~---------~~~~l~~l~~~~~~~~~~~~~~~~~~~ 112 (303)
+|++||||+++.+|.+ +++.| +.|.. |+++.+...... ..+.+++.... ....
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~---Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~------------~G~~ 104 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGAD---TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA------------AGLY 104 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCe---EEEEecCcchhhhcccccccchHHHHHHHHHh------------cCCc
Confidence 5899999999999999 89999 88887 667775321111 11112211110 1134
Q ss_pred eEEEEecCCCCCCCCCHHHHHHHh-------ccccEEEEcceec
Q psy17679 113 VSAVAGDCSLPGLGLSETDRATLV-------KQVNIVFHGAATV 149 (303)
Q Consensus 113 v~~~~~Dl~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~ 149 (303)
+..+.+|+++.+ ++..++ .++|++||++|..
T Consensus 105 a~~i~~DVss~E------~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 105 AKSINGDAFSDE------IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred eEEEEcCCCCHH------HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 667899999976 333333 3789999999986
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.2e-05 Score=69.57 Aligned_cols=77 Identities=19% Similarity=0.233 Sum_probs=52.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++++|+||||+|++|+.++++|++. ..+..|+++.|+.. ++..+.. . +..+++
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~-~gv~~lilv~R~~~------rl~~La~----------------e--l~~~~i 206 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAK-TGVAELLLVARQQE------RLQELQA----------------E--LGGGKI 206 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhh-CCCCEEEEEcCCHH------HHHHHHH----------------H--hccccH
Confidence 467799999999999999999999865 22345888888643 2222111 0 112333
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceeccc
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVRF 151 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~ 151 (303)
. .+..++.++|+|||+++....
T Consensus 207 ~---------~l~~~l~~aDiVv~~ts~~~~ 228 (340)
T PRK14982 207 L---------SLEEALPEADIVVWVASMPKG 228 (340)
T ss_pred H---------hHHHHHccCCEEEECCcCCcC
Confidence 2 356778899999999997543
|
|
| >KOG2733|consensus | Back alignment and domain information |
|---|
Probab=97.95 E-value=4.7e-05 Score=67.40 Aligned_cols=89 Identities=22% Similarity=0.331 Sum_probs=60.7
Q ss_pred EEEEeCCcchhHHHHHHHHHhcC-CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSC-PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g-~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
-++|.|||||.|.++++.++..+ .+-..+-+..|++. +|++.+++-- ....++....+ .+.+|..|++
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~------KL~~vL~~~~----~k~~~~ls~~~-i~i~D~~n~~ 75 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEK------KLQEVLEKVG----EKTGTDLSSSV-ILIADSANEA 75 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHH------HHHHHHHHHh----hccCCCcccce-EEEecCCCHH
Confidence 48999999999999999999832 11123667777643 3333222210 01122222344 8999999988
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccc
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRF 151 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~ 151 (303)
.+.+..+++.+|+||+|+-.+
T Consensus 76 ------Sl~emak~~~vivN~vGPyR~ 96 (423)
T KOG2733|consen 76 ------SLDEMAKQARVIVNCVGPYRF 96 (423)
T ss_pred ------HHHHHHhhhEEEEecccccee
Confidence 789999999999999998654
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.82 E-value=6.3e-05 Score=69.54 Aligned_cols=78 Identities=22% Similarity=0.356 Sum_probs=55.3
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLG 126 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~ 126 (303)
|+|.|+ |++|+.+++.|.+.+ .+.+|++.+|+.. +++++.... ...++.+++.|+.|.+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~-~~~~v~va~r~~~------~~~~~~~~~-----------~~~~~~~~~~d~~~~~-- 59 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRG-PFEEVTVADRNPE------KAERLAEKL-----------LGDRVEAVQVDVNDPE-- 59 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTT-CE-EEEEEESSHH------HHHHHHT-------------TTTTEEEEE--TTTHH--
T ss_pred CEEEcC-cHHHHHHHHHHhcCC-CCCcEEEEECCHH------HHHHHHhhc-----------cccceeEEEEecCCHH--
Confidence 789999 999999999999883 3336999999743 222222110 1368999999999876
Q ss_pred CCHHHHHHHhccccEEEEcceec
Q psy17679 127 LSETDRATLVKQVNIVFHGAATV 149 (303)
Q Consensus 127 ~~~~~~~~~~~~~dvVi~~a~~~ 149 (303)
++.++++++|+|||++++.
T Consensus 60 ----~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 60 ----SLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp ----HHHHHHTTSSEEEE-SSGG
T ss_pred ----HHHHHHhcCCEEEECCccc
Confidence 7899999999999999975
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00026 Score=63.71 Aligned_cols=116 Identities=16% Similarity=0.084 Sum_probs=78.4
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCC----ccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPH----LKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~----v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+|.|+|++|.+|++++..|...+.- -..+..+++.+.. +.......|+.
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~---------------------------~~a~g~~~Dl~ 53 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM---------------------------KVLEGVVMELM 53 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc---------------------------cccceeEeehh
Confidence 5899999999999999999875331 0037788886431 12334455555
Q ss_pred CCCCCC-C----HHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcC-CCceEEEEeCC
Q psy17679 122 LPGLGL-S----ETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMK-DLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~-~----~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~-~~~r~i~iSS~ 188 (303)
|....+ . .......++++|+||++||.... ..++...+..|+.-.+.+...+.+.. ....+|.+|..
T Consensus 54 d~~~~~~~~~~~~~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNP 127 (324)
T TIGR01758 54 DCAFPLLDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNP 127 (324)
T ss_pred cccchhcCceeccCChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCc
Confidence 543100 0 00234677899999999998654 34578889999999999999998872 34556666653
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00083 Score=52.93 Aligned_cols=115 Identities=17% Similarity=0.124 Sum_probs=75.1
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|+|++|.+|++++..|...+. ..++.++++.+.... ....++ .+... .......+..++
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l-~~ei~L~D~~~~~~~--g~a~Dl-~~~~~--------~~~~~~~i~~~~----- 63 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGL-ADEIVLIDINEDKAE--GEALDL-SHASA--------PLPSPVRITSGD----- 63 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTT-SSEEEEEESSHHHHH--HHHHHH-HHHHH--------GSTEEEEEEESS-----
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCceEEeccCcccce--eeehhh-hhhhh--------hccccccccccc-----
Confidence 6899999999999999999999854 356989998754211 111111 11110 001122222222
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCc-eEEEE
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLK-AFVHV 185 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~-r~i~i 185 (303)
...++++|+||-+||... ...+..+.++.|..-.+.+.+.+.+. +.. .++.+
T Consensus 64 --------~~~~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~-~p~~~vivv 117 (141)
T PF00056_consen 64 --------YEALKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKY-APDAIVIVV 117 (141)
T ss_dssp --------GGGGTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHH-STTSEEEE-
T ss_pred --------ccccccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHh-CCccEEEEe
Confidence 244578899999999754 35667888899999999999999988 443 34433
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00016 Score=64.08 Aligned_cols=87 Identities=8% Similarity=0.013 Sum_probs=57.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++|+|| |++|++++..|.+.|.. +|+++.|+.......+.+.+.+.. ....+.+...|+.
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~--~V~I~~R~~~~~~~a~~l~~~l~~------------~~~~~~~~~~d~~ 188 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAK--EITIFNIKDDFYERAEQTAEKIKQ------------EVPECIVNVYDLN 188 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCC--EEEEEeCCchHHHHHHHHHHHHhh------------cCCCceeEEechh
Confidence 45689999998 89999999999999864 488999975311111222111110 0134455667877
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceec
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATV 149 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~ 149 (303)
+.+ ++...++..|+|||+....
T Consensus 189 ~~~------~~~~~~~~~DilINaTp~G 210 (289)
T PRK12548 189 DTE------KLKAEIASSDILVNATLVG 210 (289)
T ss_pred hhh------HHHhhhccCCEEEEeCCCC
Confidence 654 4666777889999988754
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00018 Score=62.34 Aligned_cols=73 Identities=19% Similarity=0.301 Sum_probs=51.3
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|||+||||. |+.+++.|.+.|++ |++.+|+......... .+...+..+..+..
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~---v~~s~~t~~~~~~~~~---------------------~g~~~v~~g~l~~~ 55 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIE---ILVTVTTSEGKHLYPI---------------------HQALTVHTGALDPQ 55 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCe---EEEEEccCCccccccc---------------------cCCceEEECCCCHH
Confidence 58999999999 99999999999987 8888888653321110 12223444444443
Q ss_pred CCCCHHHHHHHhc--cccEEEEccee
Q psy17679 125 LGLSETDRATLVK--QVNIVFHGAAT 148 (303)
Q Consensus 125 ~~~~~~~~~~~~~--~~dvVi~~a~~ 148 (303)
++..++. ++|+||+++-+
T Consensus 56 ------~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 56 ------ELREFLKRHSIDILVDATHP 75 (256)
T ss_pred ------HHHHHHHhcCCCEEEEcCCH
Confidence 5656665 69999999876
|
This enzyme was found to be a monomer by gel filtration. |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00025 Score=55.49 Aligned_cols=81 Identities=17% Similarity=0.250 Sum_probs=55.2
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
..+++++++|.|+ |..|+.++..|.+.|.. +|+++.|+.. +.+++.+.. . ...+.++..+
T Consensus 8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~--~i~i~nRt~~------ra~~l~~~~-----~------~~~~~~~~~~ 67 (135)
T PF01488_consen 8 GDLKGKRVLVIGA-GGAARAVAAALAALGAK--EITIVNRTPE------RAEALAEEF-----G------GVNIEAIPLE 67 (135)
T ss_dssp STGTTSEEEEESS-SHHHHHHHHHHHHTTSS--EEEEEESSHH------HHHHHHHHH-----T------GCSEEEEEGG
T ss_pred CCcCCCEEEEECC-HHHHHHHHHHHHHcCCC--EEEEEECCHH------HHHHHHHHc-----C------ccccceeeHH
Confidence 3577899999995 89999999999999764 6999999743 333332210 0 1234444443
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcceeccc
Q psy17679 120 CSLPGLGLSETDRATLVKQVNIVFHGAATVRF 151 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~ 151 (303)
++.....++|+||++.+....
T Consensus 68 -----------~~~~~~~~~DivI~aT~~~~~ 88 (135)
T PF01488_consen 68 -----------DLEEALQEADIVINATPSGMP 88 (135)
T ss_dssp -----------GHCHHHHTESEEEE-SSTTST
T ss_pred -----------HHHHHHhhCCeEEEecCCCCc
Confidence 355777899999999886443
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00027 Score=58.19 Aligned_cols=80 Identities=20% Similarity=0.286 Sum_probs=47.5
Q ss_pred CCcEEEEeCC----------------cchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccC
Q psy17679 43 RDKTIFLTGG----------------TGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEV 106 (303)
Q Consensus 43 ~~~~vlItGa----------------tG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~ 106 (303)
++|+||||+| ||-.|.+|++.++.+|++ |+.+.++.+-.
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~---V~li~g~~~~~---------------------- 56 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAE---VTLIHGPSSLP---------------------- 56 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-E---EEEEE-TTS------------------------
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCE---EEEEecCcccc----------------------
Confidence 4667777665 677999999999999998 77777663210
Q ss_pred cCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccc
Q psy17679 107 PDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDE 153 (303)
Q Consensus 107 ~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~ 153 (303)
....+..+...-.+.- ...+...+.+.|++||+|++.++..
T Consensus 57 --~p~~~~~i~v~sa~em----~~~~~~~~~~~Di~I~aAAVsDf~p 97 (185)
T PF04127_consen 57 --PPPGVKVIRVESAEEM----LEAVKELLPSADIIIMAAAVSDFRP 97 (185)
T ss_dssp ----TTEEEEE-SSHHHH----HHHHHHHGGGGSEEEE-SB--SEEE
T ss_pred --ccccceEEEecchhhh----hhhhccccCcceeEEEecchhheee
Confidence 0147777766533211 1134455567899999999988754
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0011 Score=59.37 Aligned_cols=122 Identities=20% Similarity=0.124 Sum_probs=74.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|+|++|++|..++..|+..|.. ..|.+++|.+..........++. +.+.. ......+ ..+.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~-~~v~lvd~~~~~~~l~~~~~dl~-----d~~~~----~~~~~~i---~~~~-- 65 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVV-KEINLISRPKSLEKLKGLRLDIY-----DALAA----AGIDAEI---KISS-- 65 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCC-CEEEEEECcccccccccccchhh-----hchhc----cCCCcEE---EECC--
Confidence 68999999999999999999998763 35888898541111000000000 00000 0001111 1111
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
++. .++++|+||-++|.... ..+....+..|..-...+++.+.+......+|.+++.
T Consensus 66 ------d~~-~l~~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np 123 (309)
T cd05294 66 ------DLS-DVAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP 123 (309)
T ss_pred ------CHH-HhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 233 47899999999997543 3455678888998888888888776333456666664
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0017 Score=58.42 Aligned_cols=122 Identities=13% Similarity=0.047 Sum_probs=76.2
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCcc-----EEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLK-----HIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~-----~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+||.|+|++|.+|++++..|+..|. .. .+..++..+....+.....++. ........++.+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~a~g~a~Dl~---------~~~~~~~~~~~i--- 68 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEM-FGPDQPVILQLLELPQALKALEGVAMELE---------DCAFPLLAEIVI--- 68 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEEecCCcccccceeehhhh---------hccccccCceEE---
Confidence 46899999999999999999987754 23 5888887543211111111110 000000011111
Q ss_pred cCCCCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCC-CceEEEEeCC
Q psy17679 119 DCSLPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKD-LKAFVHVSTA 188 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~-~~r~i~iSS~ 188 (303)
.. .....++++|+||.+||... ...+..+.++.|+.-.+.+...+.+... ...+|.+|..
T Consensus 69 --~~--------~~~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNP 130 (322)
T cd01338 69 --TD--------DPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNP 130 (322)
T ss_pred --ec--------CcHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCc
Confidence 11 12456689999999999854 3456778899999999999999988732 4456666643
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00048 Score=63.45 Aligned_cols=100 Identities=17% Similarity=0.267 Sum_probs=64.8
Q ss_pred cCCcEEEEeCC----------------cchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhcc
Q psy17679 42 YRDKTIFLTGG----------------TGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAE 105 (303)
Q Consensus 42 ~~~~~vlItGa----------------tG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~ 105 (303)
+++++|+|||| ||.+|.++++.|..+|.+ |+.+.+......
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~---V~~~~g~~~~~~-------------------- 239 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGAD---VTLITGPVSLLT-------------------- 239 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCE---EEEeCCCCccCC--------------------
Confidence 67899999999 367999999999999998 777776542110
Q ss_pred CcCcCCceEEEEecCCCCCCCCCHHHH-HHH----hccccEEEEcceeccccccH---------HHHHhhhHHHHHHHHH
Q psy17679 106 VPDFRSKVSAVAGDCSLPGLGLSETDR-ATL----VKQVNIVFHGAATVRFDEHI---------KMAVKINVCGVQAMLQ 171 (303)
Q Consensus 106 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~-~~~----~~~~dvVi~~a~~~~~~~~~---------~~~~~~N~~~~~~ll~ 171 (303)
...+ ...|+.+.+ ++ ..+ ..++|++|++||..++.... ...+..|+..+..++.
T Consensus 240 ----~~~~--~~~~v~~~~------~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~ 307 (390)
T TIGR00521 240 ----PPGV--KSIKVSTAE------EMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIA 307 (390)
T ss_pred ----CCCc--EEEEeccHH------HHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHH
Confidence 0222 456776654 33 323 34789999999997663211 1122345555566666
Q ss_pred HHHhc
Q psy17679 172 LAREM 176 (303)
Q Consensus 172 ~a~~~ 176 (303)
..+..
T Consensus 308 ~l~~~ 312 (390)
T TIGR00521 308 EVRKI 312 (390)
T ss_pred HHHhh
Confidence 66654
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0013 Score=59.52 Aligned_cols=127 Identities=17% Similarity=0.199 Sum_probs=73.4
Q ss_pred CCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc---cH-----HHHHH--HHHHhHHHhhhh
Q psy17679 34 IGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK---DI-----QERLD--AIFEDRLFWRLR 103 (303)
Q Consensus 34 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~---~~-----~~~l~--~l~~~~~~~~~~ 103 (303)
|+.+.+..++.++|+|.|+ |++|++++..|...|.. +|++++++.-.. .. .+.+. ..+......++.
T Consensus 14 ~G~~~Q~~L~~~~VlVvG~-GglGs~va~~La~aGvg--~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~ 90 (339)
T PRK07688 14 IGEEGQQKLREKHVLIIGA-GALGTANAEMLVRAGVG--KVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLE 90 (339)
T ss_pred cCHHHHHHhcCCcEEEECC-CHHHHHHHHHHHHcCCC--eEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHH
Confidence 4455566788899999995 99999999999999763 588888753100 00 00000 000001111222
Q ss_pred ccCcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEE
Q psy17679 104 AEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFV 183 (303)
Q Consensus 104 ~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i 183 (303)
+-++. -+++.+..+++.. ....++++.|+||.+... ......+-++|... + ..+|
T Consensus 91 ~inp~--v~v~~~~~~~~~~-------~~~~~~~~~DlVid~~Dn--------------~~~r~~ln~~~~~~-~-iP~i 145 (339)
T PRK07688 91 EINSD--VRVEAIVQDVTAE-------ELEELVTGVDLIIDATDN--------------FETRFIVNDAAQKY-G-IPWI 145 (339)
T ss_pred HHCCC--cEEEEEeccCCHH-------HHHHHHcCCCEEEEcCCC--------------HHHHHHHHHHHHHh-C-CCEE
Confidence 22221 3556666666542 466778899999988441 12223455667775 4 4577
Q ss_pred EEeCC
Q psy17679 184 HVSTA 188 (303)
Q Consensus 184 ~iSS~ 188 (303)
+.++.
T Consensus 146 ~~~~~ 150 (339)
T PRK07688 146 YGACV 150 (339)
T ss_pred EEeee
Confidence 76655
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0015 Score=61.57 Aligned_cols=77 Identities=16% Similarity=0.270 Sum_probs=54.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+|+|+++ +|..+++.|++.|++ |++.++.... ...+.++++.+ .++.++.+|..
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~---V~~~d~~~~~-~~~~~~~~l~~---------------~~~~~~~~~~~ 62 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAK---VILTDEKEED-QLKEALEELGE---------------LGIELVLGEYP 62 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCE---EEEEeCCchH-HHHHHHHHHHh---------------cCCEEEeCCcc
Confidence 4678999999877 999999999999998 8888886421 11222222211 35667777766
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceec
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATV 149 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~ 149 (303)
+ ....++|+||+++|..
T Consensus 63 ~-----------~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 63 E-----------EFLEGVDLVVVSPGVP 79 (450)
T ss_pred h-----------hHhhcCCEEEECCCCC
Confidence 4 2345789999999964
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00032 Score=59.92 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=26.1
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
..-|++=-.++|++|+++++.|++.|++ |+++.|
T Consensus 14 D~VR~itN~SSGgIG~AIA~~la~~Ga~---Vvlv~~ 47 (227)
T TIGR02114 14 DSVRSITNHSTGHLGKIITETFLSAGHE---VTLVTT 47 (227)
T ss_pred CCceeecCCcccHHHHHHHHHHHHCCCE---EEEEcC
Confidence 3344444456899999999999999998 766665
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0038 Score=56.13 Aligned_cols=122 Identities=14% Similarity=0.042 Sum_probs=77.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCcc-----EEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLK-----HIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~-----~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
..||.|+|++|.+|++++..|+..|. +. .+..++..+....+.....++.- .......++.+. .
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~---------~~~~~~~~~~i~-~ 71 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGEL-FGKDQPVVLHLLDIPPAMKALEGVAMELED---------CAFPLLAGVVAT-T 71 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCc-ccCCCccEEEEEecCCcccccchHHHHHhh---------ccccccCCcEEe-c
Confidence 45899999999999999999988753 23 48888886432111111111110 000000112111 1
Q ss_pred cCCCCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCC-CceEEEEeCC
Q psy17679 119 DCSLPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKD-LKAFVHVSTA 188 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~-~~r~i~iSS~ 188 (303)
.-...++++|+||.+||... ...+..+.+..|..-.+.+...+.+... ...++.+|..
T Consensus 72 ------------~~~~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNP 131 (323)
T TIGR01759 72 ------------DPEEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNP 131 (323)
T ss_pred ------------ChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCc
Confidence 12456689999999999854 3456788999999999999999988833 4455666543
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0041 Score=55.58 Aligned_cols=118 Identities=12% Similarity=0.037 Sum_probs=76.1
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|+|++|.+|++++..|...|. ...+.+++.+.....+.+ +++ ........-.. .+.
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~-~~elvLiDi~~a~g~alD-L~~----------------~~~~~~i~~~~-~~~- 60 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPL-VSELALYDIVNTPGVAAD-LSH----------------INTPAKVTGYL-GPE- 60 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-CcEEEEEecCccceeehH-hHh----------------CCCcceEEEec-CCC-
Confidence 5899999999999999999987764 234777777511111111 110 00111111110 111
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
++...++++|+||-+||... ...+..++++.|..-.+.+.+...+......+|.+|..
T Consensus 61 ------~~y~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNP 119 (310)
T cd01337 61 ------ELKKALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNP 119 (310)
T ss_pred ------chHHhcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCc
Confidence 35567789999999999854 45567889999999999999998887334455655554
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.005 Score=51.51 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=59.9
Q ss_pred CccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC---CCcccHH----HHHHHHHHhHHHhhhhccCcC
Q psy17679 36 TPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP---KKGKDIQ----ERLDAIFEDRLFWRLRAEVPD 108 (303)
Q Consensus 36 ~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~---~~~~~~~----~~l~~l~~~~~~~~~~~~~~~ 108 (303)
.+.+..++.++|+|.| .|.+|+.++..|...|.. +|++.+++ .+....+ +.+.+.+.......+..-+|.
T Consensus 13 ~~~q~~L~~~~V~IvG-~GglGs~ia~~La~~Gvg--~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~ 89 (200)
T TIGR02354 13 PKIVQKLEQATVAICG-LGGLGSNVAINLARAGIG--KLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPY 89 (200)
T ss_pred HHHHHHHhCCcEEEEC-cCHHHHHHHHHHHHcCCC--EEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCC
Confidence 3345567889999999 589999999999999863 47787776 3222211 111111111122223322222
Q ss_pred cCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEc
Q psy17679 109 FRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHG 145 (303)
Q Consensus 109 ~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~ 145 (303)
.+++.+..++++. .+..+++++|+||.+
T Consensus 90 --~~i~~~~~~i~~~-------~~~~~~~~~DlVi~a 117 (200)
T TIGR02354 90 --TEIEAYDEKITEE-------NIDKFFKDADIVCEA 117 (200)
T ss_pred --CEEEEeeeeCCHh-------HHHHHhcCCCEEEEC
Confidence 3556666666542 467788899999987
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0077 Score=53.86 Aligned_cols=118 Identities=18% Similarity=0.179 Sum_probs=74.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
+||.|.|+ |.+|+.++..|+..|.. ..|.+++|++.... ....++ .+.. .. ......+..+
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~-~ei~l~D~~~~~~~--~~a~dL-~~~~----~~----~~~~~~i~~~------ 61 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIA-DELVLIDINEEKAE--GEALDL-EDAL----AF----LPSPVKIKAG------ 61 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCC-CEEEEEeCCcchhh--HhHhhH-HHHh----hc----cCCCeEEEcC------
Confidence 47999995 99999999999998731 24999999765322 111111 1100 00 0012222211
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
.+. .++++|+||.++|... ...+..+.+..|..-.+.+.+.+.+......++.+|..
T Consensus 62 ------~~~-~l~~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP 119 (306)
T cd05291 62 ------DYS-DCKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNP 119 (306)
T ss_pred ------CHH-HhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCh
Confidence 122 3579999999999754 34466788899999999999999887333455666543
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0022 Score=58.08 Aligned_cols=102 Identities=22% Similarity=0.258 Sum_probs=60.2
Q ss_pred CCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC---cccHH-----HHHH--HHHHhHHHhhhh
Q psy17679 34 IGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK---GKDIQ-----ERLD--AIFEDRLFWRLR 103 (303)
Q Consensus 34 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~---~~~~~-----~~l~--~l~~~~~~~~~~ 103 (303)
|+..-+..++.++|+|.| .|.+|+++++.|...|.. ++++++++.- +...+ +.+. .-+...+..++.
T Consensus 14 ~G~~~Q~~L~~~~VlIiG-~GglGs~va~~La~aGvg--~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~ 90 (338)
T PRK12475 14 IGEEGQRKIREKHVLIVG-AGALGAANAEALVRAGIG--KLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLR 90 (338)
T ss_pred cCHHHHHhhcCCcEEEEC-CCHHHHHHHHHHHHcCCC--EEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHH
Confidence 344455677889999999 588999999999999864 4888887641 00000 0000 000001111222
Q ss_pred ccCcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcce
Q psy17679 104 AEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAA 147 (303)
Q Consensus 104 ~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~ 147 (303)
+-++ .-+++.+..|++.. .+..+++++|+||.+..
T Consensus 91 ~inp--~v~i~~~~~~~~~~-------~~~~~~~~~DlVid~~D 125 (338)
T PRK12475 91 KINS--EVEIVPVVTDVTVE-------ELEELVKEVDLIIDATD 125 (338)
T ss_pred HHCC--CcEEEEEeccCCHH-------HHHHHhcCCCEEEEcCC
Confidence 2222 14566666676532 46777889999998854
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0012 Score=59.85 Aligned_cols=39 Identities=18% Similarity=0.323 Sum_probs=33.6
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
+++|+|.||||++|..+++.|.+++|.+..+..++|..+
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~ 39 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARS 39 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEcccc
Confidence 468999999999999999999998887767888887643
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0024 Score=53.56 Aligned_cols=127 Identities=14% Similarity=0.161 Sum_probs=71.8
Q ss_pred CCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHH--------HHHHHHhHHHhhhhcc
Q psy17679 34 IGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQER--------LDAIFEDRLFWRLRAE 105 (303)
Q Consensus 34 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~--------l~~l~~~~~~~~~~~~ 105 (303)
|+.+.+..+..++|+|.| .|.+|+.+++.|...|.. ++++++++.-......+ +-+.+...+..++..-
T Consensus 11 ~g~~~q~kl~~~~VlviG-~GglGs~ia~~La~~Gv~--~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~ 87 (202)
T TIGR02356 11 IGEEGQQRLLNSHVLIIG-AGGLGSPAALYLAGAGVG--TIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLREL 87 (202)
T ss_pred cCHHHHHHhcCCCEEEEC-CCHHHHHHHHHHHHcCCC--eEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHh
Confidence 455566778889999998 799999999999999763 48887776311100000 0001111111222222
Q ss_pred CcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEE
Q psy17679 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHV 185 (303)
Q Consensus 106 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~i 185 (303)
+|. .+++.+...+.+ ..+...+++.|+||.+... + ..-..+-+.+... + ..+|+.
T Consensus 88 np~--v~i~~~~~~i~~-------~~~~~~~~~~D~Vi~~~d~------~--------~~r~~l~~~~~~~-~-ip~i~~ 142 (202)
T TIGR02356 88 NSD--IQVTALKERVTA-------ENLELLINNVDLVLDCTDN------F--------ATRYLINDACVAL-G-TPLISA 142 (202)
T ss_pred CCC--CEEEEehhcCCH-------HHHHHHHhCCCEEEECCCC------H--------HHHHHHHHHHHHc-C-CCEEEE
Confidence 221 234444444432 2466778899999987642 1 1113455666665 4 467777
Q ss_pred eCC
Q psy17679 186 STA 188 (303)
Q Consensus 186 SS~ 188 (303)
++.
T Consensus 143 ~~~ 145 (202)
T TIGR02356 143 AVV 145 (202)
T ss_pred Eec
Confidence 655
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.014 Score=52.37 Aligned_cols=119 Identities=15% Similarity=0.117 Sum_probs=76.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.++||.|+|+ |.+|.+++..|+..|. ...+..++++..... ....++ ....+- ..++... .+
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~-~~el~L~D~~~~~~~--g~~~Dl---------~~~~~~-~~~~~i~-~~--- 66 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGI-ADELVIIDINKEKAE--GDAMDL---------SHAVPF-TSPTKIY-AG--- 66 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCCchhH--HHHHHH---------Hhhccc-cCCeEEE-eC---
Confidence 3479999997 9999999999998865 245888998654321 111111 110000 0122222 11
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
.+ ..++++|+||-+||... ...+..+.+..|..-.+.+++.+.+......++.+|..
T Consensus 67 --------~~-~~~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsNP 124 (315)
T PRK00066 67 --------DY-SDCKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASNP 124 (315)
T ss_pred --------CH-HHhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCc
Confidence 13 34689999999999854 34567788899999999998888887223455555543
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0077 Score=54.25 Aligned_cols=122 Identities=16% Similarity=0.088 Sum_probs=76.1
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCcc-----EEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLK-----HIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~-----~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
++||.|+|++|.+|++++..|+..|. +. .+..+++++....+.....++.- .......++.+. .
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~-~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~---------~~~~~~~~~~i~-~ 72 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDM-LGKDQPVILQLLEIPPALKALEGVVMELDD---------CAFPLLAGVVIT-D 72 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhh-cCCCCccEEEEEecCCcccccceeehhhhh---------hhhhhcCCcEEe-c
Confidence 46899999999999999999987643 22 48888875432111111111100 000000122211 1
Q ss_pred cCCCCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCC-CceEEEEeCC
Q psy17679 119 DCSLPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKD-LKAFVHVSTA 188 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~-~~r~i~iSS~ 188 (303)
.-...++++|+||-+||... ...+..+.+..|..-.+.+...+.+..+ ...+|.+|..
T Consensus 73 ------------~~y~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNP 132 (326)
T PRK05442 73 ------------DPNVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNP 132 (326)
T ss_pred ------------ChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 12356688999999999754 3557788899999999999999988522 4566666654
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0025 Score=58.68 Aligned_cols=38 Identities=24% Similarity=0.363 Sum_probs=30.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+++||.|.||||++|..+++.|.++ ....|..+++..
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~h--P~~el~~l~s~~ 73 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANH--PDFEITVMTADR 73 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhC--CCCeEEEEEChh
Confidence 45679999999999999999999887 223477877753
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0064 Score=51.36 Aligned_cols=130 Identities=16% Similarity=0.088 Sum_probs=72.8
Q ss_pred CCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC---CcccHH----HHHHHHHHhHHHhhhhccCc
Q psy17679 35 GTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK---KGKDIQ----ERLDAIFEDRLFWRLRAEVP 107 (303)
Q Consensus 35 ~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~---~~~~~~----~~l~~l~~~~~~~~~~~~~~ 107 (303)
+.+.+..++.++|+|.| .|.+|+.+++.|...|.. ++++++.+. ++...+ +.+...+......++.+-++
T Consensus 19 g~~~q~~L~~~~V~ViG-~GglGs~ia~~La~~Gvg--~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp 95 (212)
T PRK08644 19 TPKLLEKLKKAKVGIAG-AGGLGSNIAVALARSGVG--NLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINP 95 (212)
T ss_pred CHHHHHHHhCCCEEEEC-cCHHHHHHHHHHHHcCCC--eEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCC
Confidence 34556678889999999 699999999999998764 577777762 111101 00100111111222222222
Q ss_pred CcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy17679 108 DFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVST 187 (303)
Q Consensus 108 ~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS 187 (303)
. .+++.+...+++. .....++++|+||.+.-. + .....+.+.+.+. -...+|+.+.
T Consensus 96 ~--v~v~~~~~~i~~~-------~~~~~~~~~DvVI~a~D~------~--------~~r~~l~~~~~~~-~~~p~I~~~~ 151 (212)
T PRK08644 96 F--VEIEAHNEKIDED-------NIEELFKDCDIVVEAFDN------A--------ETKAMLVETVLEH-PGKKLVAASG 151 (212)
T ss_pred C--CEEEEEeeecCHH-------HHHHHHcCCCEEEECCCC------H--------HHHHHHHHHHHHh-CCCCEEEeeh
Confidence 1 3455555555442 456778899999988431 1 1123445566554 1356777765
Q ss_pred Cccc
Q psy17679 188 AFTH 191 (303)
Q Consensus 188 ~~~~ 191 (303)
..+.
T Consensus 152 ~~~~ 155 (212)
T PRK08644 152 MAGY 155 (212)
T ss_pred hhcc
Confidence 5443
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0086 Score=51.76 Aligned_cols=127 Identities=11% Similarity=0.060 Sum_probs=71.9
Q ss_pred CCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHH--------HHHHHHHHhHHHhhhhcc
Q psy17679 34 IGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQ--------ERLDAIFEDRLFWRLRAE 105 (303)
Q Consensus 34 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~--------~~l~~l~~~~~~~~~~~~ 105 (303)
|+.+.+..++.++|+|.|+ |.+|+.+++.|...|.. ++++++.+.-..... +.+-..+...+..++.+-
T Consensus 22 ~g~~~Q~~L~~~~VliiG~-GglGs~va~~La~~Gvg--~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~l 98 (245)
T PRK05690 22 FDFDGQEKLKAARVLVVGL-GGLGCAASQYLAAAGVG--TLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARI 98 (245)
T ss_pred cCHHHHHHhcCCeEEEECC-CHHHHHHHHHHHHcCCC--EEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHH
Confidence 3444556788899999996 99999999999999753 577776653111100 011011111122233333
Q ss_pred CcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEE
Q psy17679 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHV 185 (303)
Q Consensus 106 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~i 185 (303)
+|. .+++.+...+++ .....+++++|+||.+... + ..-..+-+++... + ..+|+.
T Consensus 99 np~--v~i~~~~~~i~~-------~~~~~~~~~~DiVi~~~D~------~--------~~r~~ln~~~~~~-~-ip~v~~ 153 (245)
T PRK05690 99 NPH--IAIETINARLDD-------DELAALIAGHDLVLDCTDN------V--------ATRNQLNRACFAA-K-KPLVSG 153 (245)
T ss_pred CCC--CEEEEEeccCCH-------HHHHHHHhcCCEEEecCCC------H--------HHHHHHHHHHHHh-C-CEEEEe
Confidence 332 345555554443 2466778899999988642 1 1112445666665 4 456765
Q ss_pred eCC
Q psy17679 186 STA 188 (303)
Q Consensus 186 SS~ 188 (303)
++.
T Consensus 154 ~~~ 156 (245)
T PRK05690 154 AAI 156 (245)
T ss_pred eec
Confidence 444
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0057 Score=52.15 Aligned_cols=74 Identities=18% Similarity=0.311 Sum_probs=55.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+++|.| .|-+|+.+++.|.+.|++ |.++.+++.... +.... ......+.+|-+++.
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~---Vv~Id~d~~~~~------~~~~~-------------~~~~~~v~gd~t~~~ 57 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHN---VVLIDRDEERVE------EFLAD-------------ELDTHVVIGDATDED 57 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCc---eEEEEcCHHHHH------HHhhh-------------hcceEEEEecCCCHH
Confidence 5788888 699999999999999998 888888754322 11110 146778999999876
Q ss_pred CCCCHHHHHHH-hccccEEEEcce
Q psy17679 125 LGLSETDRATL-VKQVNIVFHGAA 147 (303)
Q Consensus 125 ~~~~~~~~~~~-~~~~dvVi~~a~ 147 (303)
.+.++ +.++|+++-..+
T Consensus 58 ------~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 58 ------VLEEAGIDDADAVVAATG 75 (225)
T ss_pred ------HHHhcCCCcCCEEEEeeC
Confidence 56666 568999986655
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.011 Score=60.60 Aligned_cols=83 Identities=18% Similarity=0.136 Sum_probs=57.4
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCC-C----------ccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcC
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCP-H----------LKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPD 108 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~-~----------v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~ 108 (303)
....+++|+|.|+ |++|+.+++.|.+... + +..|.+.++... +.+++...
T Consensus 565 ~~~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~------~a~~la~~------------ 625 (1042)
T PLN02819 565 VTKKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLK------DAKETVEG------------ 625 (1042)
T ss_pred ccccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHH------HHHHHHHh------------
Confidence 3445789999995 9999999999987622 1 123666666532 11111110
Q ss_pred cCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEccee
Q psy17679 109 FRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAAT 148 (303)
Q Consensus 109 ~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~ 148 (303)
.+++..+..|+.|.+ ++..+++++|+||++...
T Consensus 626 -~~~~~~v~lDv~D~e------~L~~~v~~~DaVIsalP~ 658 (1042)
T PLN02819 626 -IENAEAVQLDVSDSE------SLLKYVSQVDVVISLLPA 658 (1042)
T ss_pred -cCCCceEEeecCCHH------HHHHhhcCCCEEEECCCc
Confidence 136778999998876 677888899999999886
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.018 Score=53.83 Aligned_cols=123 Identities=12% Similarity=0.078 Sum_probs=75.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhc---CC-CccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEE
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRS---CP-HLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVA 117 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~---g~-~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~ 117 (303)
...-+|+||||+|.||++|+-.+..= |. +...+..++.+.....+....-++. +..+ ....++.+.
T Consensus 121 ~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~-D~a~--------pll~~v~i~- 190 (452)
T cd05295 121 INPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVE-DLAF--------PLLRGISVT- 190 (452)
T ss_pred CCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHH-HhHH--------hhcCCcEEE-
Confidence 34568999999999999999998652 42 3233556666422211111111111 1100 001123222
Q ss_pred ecCCCCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCC--ceEEEEeC
Q psy17679 118 GDCSLPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDL--KAFVHVST 187 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~--~r~i~iSS 187 (303)
.| -...++++|+||-+||... ......+.++.|..-.+...+.+.+. .. .+++.+.|
T Consensus 191 ~~------------~~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~-a~~~~~VlVv~t 250 (452)
T cd05295 191 TD------------LDVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKN-AKEDVKVIVAGR 250 (452)
T ss_pred EC------------CHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHh-CCCCCeEEEEeC
Confidence 11 2467789999999999854 34567788899999999999998887 43 55666654
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.012 Score=45.64 Aligned_cols=91 Identities=19% Similarity=0.256 Sum_probs=63.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
++++++.| +| .|.+++..|.+.|++ |++++.++.. ++.... ..+.++.+|+.++
T Consensus 17 ~~kileIG-~G-fG~~vA~~L~~~G~~---ViaIDi~~~a------V~~a~~---------------~~~~~v~dDlf~p 70 (134)
T PRK04148 17 NKKIVELG-IG-FYFKVAKKLKESGFD---VIVIDINEKA------VEKAKK---------------LGLNAFVDDLFNP 70 (134)
T ss_pred CCEEEEEE-ec-CCHHHHHHHHHCCCE---EEEEECCHHH------HHHHHH---------------hCCeEEECcCCCC
Confidence 46899998 67 899999999999988 9999987642 221111 3678999999998
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEE
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFV 183 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i 183 (303)
.+ .+-++.|.|+..=. +.+ . ...+++.|++. ++.-+|
T Consensus 71 ~~--------~~y~~a~liysirp------p~e-l-------~~~~~~la~~~-~~~~~i 107 (134)
T PRK04148 71 NL--------EIYKNAKLIYSIRP------PRD-L-------QPFILELAKKI-NVPLII 107 (134)
T ss_pred CH--------HHHhcCCEEEEeCC------CHH-H-------HHHHHHHHHHc-CCCEEE
Confidence 73 44467788874422 222 2 14678888888 655333
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.027 Score=52.71 Aligned_cols=124 Identities=14% Similarity=0.063 Sum_probs=79.5
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhc-------CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCc
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRS-------CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSK 112 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~-------g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 112 (303)
.+.+.-||.|+|++|.+|.+++..|+.. |.. .++..++++++.... ...++ .+..+ ....+
T Consensus 96 ~~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~-~eLvliD~~~~~a~G--~amDL-~daa~--------~~~~~ 163 (444)
T PLN00112 96 SWKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIA-LKLLGSERSKQALEG--VAMEL-EDSLY--------PLLRE 163 (444)
T ss_pred cCCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcc-cEEEEEcCCcchhHH--HHHHH-HHhhh--------hhcCc
Confidence 4444569999999999999999999877 432 247778887654321 11111 11100 00112
Q ss_pred eEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHh-cCCCceEEEEeCC
Q psy17679 113 VSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLARE-MKDLKAFVHVSTA 188 (303)
Q Consensus 113 v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~-~~~~~r~i~iSS~ 188 (303)
+.+..+| ...++++|+||-+||... ...+..++++.|..-.+.+.+.+.+ .+....+|.+|..
T Consensus 164 v~i~~~~-------------ye~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNP 228 (444)
T PLN00112 164 VSIGIDP-------------YEVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNP 228 (444)
T ss_pred eEEecCC-------------HHHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCc
Confidence 2211111 355688999999999854 3456788999999999999999988 5344556666654
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.006 Score=52.14 Aligned_cols=127 Identities=17% Similarity=0.177 Sum_probs=72.2
Q ss_pred CCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC---cccH-----HHHHHHHHHhHHHhhhhcc
Q psy17679 34 IGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK---GKDI-----QERLDAIFEDRLFWRLRAE 105 (303)
Q Consensus 34 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~---~~~~-----~~~l~~l~~~~~~~~~~~~ 105 (303)
|+.+.+..++.++|+|.| .|.+|+++++.|...|.. .+++++...- +... .+.+-+.+...+..++.+-
T Consensus 11 ~g~~~q~~L~~~~VlivG-~GglGs~va~~La~~Gvg--~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~ 87 (228)
T cd00757 11 IGEEGQEKLKNARVLVVG-AGGLGSPAAEYLAAAGVG--KLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAI 87 (228)
T ss_pred cCHHHHHHHhCCcEEEEC-CCHHHHHHHHHHHHcCCC--EEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHh
Confidence 444556678889999998 799999999999999764 4666654321 0000 0011111111122223322
Q ss_pred CcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEE
Q psy17679 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHV 185 (303)
Q Consensus 106 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~i 185 (303)
+|. .+++.+...++. ..+..+++++|+||.+.... ..-..+-+.|... + ..+|+.
T Consensus 88 np~--~~i~~~~~~i~~-------~~~~~~~~~~DvVi~~~d~~--------------~~r~~l~~~~~~~-~-ip~i~~ 142 (228)
T cd00757 88 NPD--VEIEAYNERLDA-------ENAEELIAGYDLVLDCTDNF--------------ATRYLINDACVKL-G-KPLVSG 142 (228)
T ss_pred CCC--CEEEEecceeCH-------HHHHHHHhCCCEEEEcCCCH--------------HHHHHHHHHHHHc-C-CCEEEE
Confidence 221 345555555532 25677788999999886531 1113455666665 4 467776
Q ss_pred eCC
Q psy17679 186 STA 188 (303)
Q Consensus 186 SS~ 188 (303)
+..
T Consensus 143 g~~ 145 (228)
T cd00757 143 AVL 145 (228)
T ss_pred Eec
Confidence 655
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.019 Score=51.34 Aligned_cols=117 Identities=12% Similarity=0.055 Sum_probs=74.7
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGL 125 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~ 125 (303)
||.|+|++|.+|++++..|...+. ...+.++++.+....+.+ +++ ......+.-.. .+.
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~-~~elvL~Di~~a~g~a~D-L~~----------------~~~~~~i~~~~-~~~-- 59 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPY-VSELSLYDIAGAAGVAAD-LSH----------------IPTAASVKGFS-GEE-- 59 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCC-CcEEEEecCCCCcEEEch-hhc----------------CCcCceEEEec-CCC--
Confidence 589999999999999999988754 245888887651111111 100 00111111101 011
Q ss_pred CCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 126 GLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 126 ~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
++...++++|+||-+||... ...+..+.+..|..-.+.+.+.+.+......+|.+|..
T Consensus 60 -----~~~~~~~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNP 118 (312)
T TIGR01772 60 -----GLENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNP 118 (312)
T ss_pred -----chHHHcCCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCc
Confidence 24567889999999999754 34566788899999999999888887333345555554
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0094 Score=54.93 Aligned_cols=44 Identities=16% Similarity=0.196 Sum_probs=34.6
Q ss_pred CCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 34 IGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 34 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
+..+.+..++.++|+|.| +|.+|++++..|...|.. ++++++++
T Consensus 125 ~g~~~q~~l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg--~i~lvD~d 168 (376)
T PRK08762 125 VGEEGQRRLLEARVLLIG-AGGLGSPAALYLAAAGVG--TLGIVDHD 168 (376)
T ss_pred cCHHHHHHHhcCcEEEEC-CCHHHHHHHHHHHHcCCC--eEEEEeCC
Confidence 334444567788999997 689999999999999764 58888876
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.022 Score=47.57 Aligned_cols=129 Identities=14% Similarity=0.198 Sum_probs=72.8
Q ss_pred CCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc---ccHH-------HHHHHHHHhHHHhhhh
Q psy17679 34 IGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG---KDIQ-------ERLDAIFEDRLFWRLR 103 (303)
Q Consensus 34 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~---~~~~-------~~l~~l~~~~~~~~~~ 103 (303)
|+.+.+..++.++|+|.|+ |.+|..+++.|...|-. ++++++...-. ...+ +.+.+.+...+..++.
T Consensus 9 ~G~~~q~~L~~s~VlviG~-gglGsevak~L~~~GVg--~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~ 85 (198)
T cd01485 9 WGDEAQNKLRSAKVLIIGA-GALGAEIAKNLVLAGID--SITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQ 85 (198)
T ss_pred cCHHHHHHHhhCcEEEECC-CHHHHHHHHHHHHcCCC--EEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHH
Confidence 4555566677899999985 55999999999999754 57777765211 0000 1111111112222333
Q ss_pred ccCcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEE
Q psy17679 104 AEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFV 183 (303)
Q Consensus 104 ~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i 183 (303)
+-+|. .+++.+..++.+.. ......++++|+||.+... .. ....+-+.|.+. ++ .+|
T Consensus 86 ~lNp~--v~i~~~~~~~~~~~-----~~~~~~~~~~dvVi~~~d~------~~--------~~~~ln~~c~~~-~i-p~i 142 (198)
T cd01485 86 ELNPN--VKLSIVEEDSLSND-----SNIEEYLQKFTLVIATEEN------YE--------RTAKVNDVCRKH-HI-PFI 142 (198)
T ss_pred HHCCC--CEEEEEecccccch-----hhHHHHHhCCCEEEECCCC------HH--------HHHHHHHHHHHc-CC-CEE
Confidence 33332 35555555554211 1355677899999966331 11 113455677775 44 678
Q ss_pred EEeCC
Q psy17679 184 HVSTA 188 (303)
Q Consensus 184 ~iSS~ 188 (303)
+.++.
T Consensus 143 ~~~~~ 147 (198)
T cd01485 143 SCATY 147 (198)
T ss_pred EEEee
Confidence 77776
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.026 Score=50.77 Aligned_cols=119 Identities=18% Similarity=0.158 Sum_probs=74.8
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
+.+||.|+|| |.+|+.++..|...|. ..|..+++++...... .++. .. . .+....... +.+ +.
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~--~~l~L~Di~~~~~~g~-~lDl--~~------~--~~~~~~~~~-i~~--~~ 66 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL--GDVVLYDVIKGVPQGK-ALDL--KH------F--STLVGSNIN-ILG--TN 66 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC--CeEEEEECCCccchhH-HHHH--hh------h--ccccCCCeE-EEe--CC
Confidence 4579999996 9999999999988873 2388888876543211 1111 10 0 000001111 111 11
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCc-eEEEEeCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLK-AFVHVSTA 188 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~-r~i~iSS~ 188 (303)
++. .++++|+||.++|.... .....+.+..|..-...+.+.+.+. ..+ .+|.+|..
T Consensus 67 --------d~~-~l~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~-~p~a~vivvsNP 124 (319)
T PTZ00117 67 --------NYE-DIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKY-CPNAFVICVTNP 124 (319)
T ss_pred --------CHH-HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCh
Confidence 244 66899999999987543 3455677888888788888888877 444 46776654
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.027 Score=50.37 Aligned_cols=119 Identities=15% Similarity=0.081 Sum_probs=71.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
++||.|.|+ |.+|..++..+...|.. .|.++++++.... ....++.... . .. ....++. . + .
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~--ev~L~D~~~~~~~--~~~~dl~~~~-----~---~~-~~~~~i~-~--~-~ 63 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELG--DVVLFDIVEGVPQ--GKALDIAEAA-----P---VE-GFDTKIT-G--T-N 63 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe--EEEEEECCCchhH--HHHHHHHhhh-----h---hc-CCCcEEE-e--C-C
Confidence 478999998 99999999999987652 4888898654322 1111111100 0 00 0111111 1 0 1
Q ss_pred CCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
++ ..++++|+||.+++... ...+..+.+..|+.-...+++.+.+......+|.+|..
T Consensus 64 -------d~-~~~~~aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tNP 121 (307)
T PRK06223 64 -------DY-EDIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTNP 121 (307)
T ss_pred -------CH-HHHCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 23 34689999999998654 23344566667888888888877776223346666544
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.03 Score=43.57 Aligned_cols=117 Identities=20% Similarity=0.271 Sum_probs=66.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc---cc-----HHHHHHHHHHhHHHhhhhccCcCcCCceEE
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG---KD-----IQERLDAIFEDRLFWRLRAEVPDFRSKVSA 115 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~---~~-----~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~ 115 (303)
.++|+|.| .|.+|+.+++.|...|.. ++++++...=. .. ..+.+-..+...+...+.+..| ..+++.
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~--~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np--~~~v~~ 76 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGVG--KITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINP--DVEVEA 76 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTTS--EEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHST--TSEEEE
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCCC--ceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcC--ceeeee
Confidence 47899998 689999999999999764 47776664210 00 0000000011111122222222 246667
Q ss_pred EEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 116 VAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 116 ~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
+..++.+ .....+++++|+||.+... ......+.+.+... +. ++|+.++.
T Consensus 77 ~~~~~~~-------~~~~~~~~~~d~vi~~~d~--------------~~~~~~l~~~~~~~-~~-p~i~~~~~ 126 (135)
T PF00899_consen 77 IPEKIDE-------ENIEELLKDYDIVIDCVDS--------------LAARLLLNEICREY-GI-PFIDAGVN 126 (135)
T ss_dssp EESHCSH-------HHHHHHHHTSSEEEEESSS--------------HHHHHHHHHHHHHT-T--EEEEEEEE
T ss_pred eeccccc-------ccccccccCCCEEEEecCC--------------HHHHHHHHHHHHHc-CC-CEEEEEee
Confidence 7777633 2567888899999987542 11223456677775 44 67777665
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.011 Score=55.72 Aligned_cols=73 Identities=19% Similarity=0.298 Sum_probs=52.6
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|+|+|+ |.+|+++++.|.+.|++ |+++++++.. ++.+.. ..++.++.+|.++..
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~---v~vid~~~~~------~~~~~~--------------~~~~~~~~gd~~~~~ 56 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENND---VTVIDTDEER------LRRLQD--------------RLDVRTVVGNGSSPD 56 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCc---EEEEECCHHH------HHHHHh--------------hcCEEEEEeCCCCHH
Confidence 57999996 99999999999999888 8888886432 222111 035778888887755
Q ss_pred CCCCHHHHHHH-hccccEEEEcce
Q psy17679 125 LGLSETDRATL-VKQVNIVFHGAA 147 (303)
Q Consensus 125 ~~~~~~~~~~~-~~~~dvVi~~a~ 147 (303)
.+..+ ++++|.||-+..
T Consensus 57 ------~l~~~~~~~a~~vi~~~~ 74 (453)
T PRK09496 57 ------VLREAGAEDADLLIAVTD 74 (453)
T ss_pred ------HHHHcCCCcCCEEEEecC
Confidence 56665 567888776654
|
|
| >KOG1494|consensus | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.025 Score=48.93 Aligned_cols=119 Identities=17% Similarity=0.143 Sum_probs=75.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC-cccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK-GKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~-~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
.+-||.|.||.|+||..|...|. ..+.|..+...+-... +.. ..+..+ +....+. ...
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GVa--aDlSHI--------------~T~s~V~----g~~ 85 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGVA--ADLSHI--------------NTNSSVV----GFT 85 (345)
T ss_pred CcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCccc--cccccc--------------CCCCcee----ccC
Confidence 45689999999999999876665 4466665655554321 110 000000 0001111 111
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
....+.+++++.|+||--||... ..-...++|.+|..-...|..++.++-....+.++|..
T Consensus 86 ------g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsNP 147 (345)
T KOG1494|consen 86 ------GADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISNP 147 (345)
T ss_pred ------ChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecCc
Confidence 12368899999999999999865 34556789999999999998888776234456666654
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.091 Score=47.11 Aligned_cols=118 Identities=14% Similarity=0.079 Sum_probs=74.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
+||.|+|+ |.+|++++..|+..|. ...+.+++.++.... ....++. +. .+ ......+....
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~-~~el~LiD~~~~~~~--g~a~Dl~-~~--------~~-~~~~~~v~~~~----- 64 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGL-ADELVLVDVVEDKLK--GEAMDLQ-HG--------SA-FLKNPKIEADK----- 64 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCccHHH--HHHHHHH-Hh--------hc-cCCCCEEEECC-----
Confidence 58999995 9999999999988854 345888888654221 1111111 10 00 00111222111
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
++.. ++++|+||-+||...- ..+..+++..|..-.+.+.+.+.+......++.+|..
T Consensus 65 ------dy~~-~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP 122 (312)
T cd05293 65 ------DYSV-TANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSNP 122 (312)
T ss_pred ------CHHH-hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccCh
Confidence 2333 6899999999997543 4567788899999999999999888333455666643
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.052 Score=48.31 Aligned_cols=118 Identities=16% Similarity=0.126 Sum_probs=73.3
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
+||.|+|+ |++|++++..|+..+.. ..+.+++....... ....++ ....+..... ..+.+| .
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~-~el~LiDi~~~~~~--G~a~DL---------~~~~~~~~~~-~~i~~~-~--- 62 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLG-SELVLIDINEEKAE--GVALDL---------SHAAAPLGSD-VKITGD-G--- 62 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhccccc-ceEEEEEccccccc--chhcch---------hhcchhccCc-eEEecC-C---
Confidence 58999999 99999999999777432 24888888743221 111111 0000000011 112222 1
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCce-EEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKA-FVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r-~i~iSS~ 188 (303)
. .+.+++.|+|+-+||... ......++++.|..-...+.+...+. +..- |+.+|..
T Consensus 63 ------~-y~~~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~-~~d~ivlVvtNP 120 (313)
T COG0039 63 ------D-YEDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY-APDAIVLVVTNP 120 (313)
T ss_pred ------C-hhhhcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCeEEEEecCc
Confidence 1 244578899999999765 34577889999999999999999888 4444 4444443
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.038 Score=47.25 Aligned_cols=127 Identities=17% Similarity=0.143 Sum_probs=71.2
Q ss_pred ccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC---cccHH-----HHHHHHHHhHHHhhhhccCcCcC
Q psy17679 39 QEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK---GKDIQ-----ERLDAIFEDRLFWRLRAEVPDFR 110 (303)
Q Consensus 39 ~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~---~~~~~-----~~l~~l~~~~~~~~~~~~~~~~~ 110 (303)
+..+++++|+|.| .|.+|+++++.|...|.. ++++++...- +.+.+ +.+-+.+...+..++.+-+|.
T Consensus 6 ~~~L~~~~VlVvG-~GGvGs~va~~Lar~GVg--~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~-- 80 (231)
T cd00755 6 LEKLRNAHVAVVG-LGGVGSWAAEALARSGVG--KLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPE-- 80 (231)
T ss_pred HHHHhCCCEEEEC-CCHHHHHHHHHHHHcCCC--EEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCC--
Confidence 4456778999998 799999999999999753 5777766431 11100 011001111122233333332
Q ss_pred CceEEEEecCCCCCCCCCHHHHHHHhc-cccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCc
Q psy17679 111 SKVSAVAGDCSLPGLGLSETDRATLVK-QVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAF 189 (303)
Q Consensus 111 ~~v~~~~~Dl~d~~~~~~~~~~~~~~~-~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~ 189 (303)
.+++.+...++.. ....++. ++|+||.+... ......+.+.|... + ..+|...+++
T Consensus 81 ~~V~~~~~~i~~~-------~~~~l~~~~~D~VvdaiD~--------------~~~k~~L~~~c~~~-~-ip~I~s~g~g 137 (231)
T cd00755 81 CEVDAVEEFLTPD-------NSEDLLGGDPDFVVDAIDS--------------IRAKVALIAYCRKR-K-IPVISSMGAG 137 (231)
T ss_pred cEEEEeeeecCHh-------HHHHHhcCCCCEEEEcCCC--------------HHHHHHHHHHHHHh-C-CCEEEEeCCc
Confidence 3455555555432 3455554 79999988542 22224567788776 4 4677666665
Q ss_pred ccCC
Q psy17679 190 THCP 193 (303)
Q Consensus 190 ~~~~ 193 (303)
+...
T Consensus 138 ~~~d 141 (231)
T cd00755 138 GKLD 141 (231)
T ss_pred CCCC
Confidence 5433
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0091 Score=54.00 Aligned_cols=37 Identities=24% Similarity=0.291 Sum_probs=31.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
+++|.|+||||++|..+++.|.++++.+..+..+...
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~ 40 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASS 40 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECc
Confidence 4789999999999999999999887776666666554
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.022 Score=52.01 Aligned_cols=127 Identities=15% Similarity=0.131 Sum_probs=72.4
Q ss_pred CCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC---CcccH-----HHHHHHHHHhHHHhhhhcc
Q psy17679 34 IGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK---KGKDI-----QERLDAIFEDRLFWRLRAE 105 (303)
Q Consensus 34 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~---~~~~~-----~~~l~~l~~~~~~~~~~~~ 105 (303)
|+.+.+..+++++|+|.| .|.+|+.+++.|...|.. ++++++... ++... .+.+-..+......++.+-
T Consensus 18 ~g~~~q~~L~~~~VlivG-~GGlGs~~a~~La~~Gvg--~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~ 94 (355)
T PRK05597 18 IGQQGQQSLFDAKVAVIG-AGGLGSPALLYLAGAGVG--HITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLAL 94 (355)
T ss_pred cCHHHHHHHhCCeEEEEC-CCHHHHHHHHHHHHcCCC--eEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHH
Confidence 445556678889999998 599999999999998764 577777753 11000 0011111111122233333
Q ss_pred CcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEE
Q psy17679 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHV 185 (303)
Q Consensus 106 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~i 185 (303)
+|. -+++.+...++.. ....+++++|+||.+... +..-..+-++|.+. + ..||+.
T Consensus 95 np~--v~v~~~~~~i~~~-------~~~~~~~~~DvVvd~~d~--------------~~~r~~~n~~c~~~-~-ip~v~~ 149 (355)
T PRK05597 95 NPD--VKVTVSVRRLTWS-------NALDELRDADVILDGSDN--------------FDTRHLASWAAARL-G-IPHVWA 149 (355)
T ss_pred CCC--cEEEEEEeecCHH-------HHHHHHhCCCEEEECCCC--------------HHHHHHHHHHHHHc-C-CCEEEE
Confidence 332 3455555555532 456778899999988642 11112344566665 4 457766
Q ss_pred eCC
Q psy17679 186 STA 188 (303)
Q Consensus 186 SS~ 188 (303)
++.
T Consensus 150 ~~~ 152 (355)
T PRK05597 150 SIL 152 (355)
T ss_pred EEe
Confidence 654
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0056 Score=54.12 Aligned_cols=77 Identities=19% Similarity=0.267 Sum_probs=52.1
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
..++|-||+||.|..+++.|..+|.. -.+..|+.. ...++...+. +....+.+. .+
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~---~aLAgRs~~---kl~~l~~~LG---------------~~~~~~p~~--~p- 62 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLT---AALAGRSSA---KLDALRASLG---------------PEAAVFPLG--VP- 62 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCc---hhhccCCHH---HHHHHHHhcC---------------ccccccCCC--CH-
Confidence 46899999999999999999999877 445666532 2222222222 222233322 23
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR 150 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~ 150 (303)
+.+....++..+|+||+|+-.
T Consensus 63 -----~~~~~~~~~~~VVlncvGPyt 83 (382)
T COG3268 63 -----AALEAMASRTQVVLNCVGPYT 83 (382)
T ss_pred -----HHHHHHHhcceEEEecccccc
Confidence 367888889999999999854
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.035 Score=48.86 Aligned_cols=127 Identities=11% Similarity=0.085 Sum_probs=72.4
Q ss_pred CccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC---ccc-----HHHHHHHHHHhHHHhhhhccCc
Q psy17679 36 TPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK---GKD-----IQERLDAIFEDRLFWRLRAEVP 107 (303)
Q Consensus 36 ~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~---~~~-----~~~~l~~l~~~~~~~~~~~~~~ 107 (303)
.+.++.++..+|+|.| .|.+|..+++.|...|.. ++.+++.+.= +.. ..+.+-..+......++.+-+|
T Consensus 19 ~e~Q~kL~~s~VlIvG-~GGLGs~va~~LA~aGVG--~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP 95 (287)
T PRK08223 19 PTEQQRLRNSRVAIAG-LGGVGGIHLLTLARLGIG--KFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINP 95 (287)
T ss_pred HHHHHHHhcCCEEEEC-CCHHHHHHHHHHHHhCCC--eEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCC
Confidence 4445667889999998 689999999999999764 4767666431 100 0111111111222233333333
Q ss_pred CcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy17679 108 DFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVST 187 (303)
Q Consensus 108 ~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS 187 (303)
. .+++.+...++.. ....+++++|+||.+.-.. ++..-..+-++|... + ..+|+.+.
T Consensus 96 ~--v~V~~~~~~l~~~-------n~~~ll~~~DlVvD~~D~~------------~~~~r~~ln~~c~~~-~-iP~V~~~~ 152 (287)
T PRK08223 96 E--LEIRAFPEGIGKE-------NADAFLDGVDVYVDGLDFF------------EFDARRLVFAACQQR-G-IPALTAAP 152 (287)
T ss_pred C--CEEEEEecccCcc-------CHHHHHhCCCEEEECCCCC------------cHHHHHHHHHHHHHc-C-CCEEEEec
Confidence 2 4566666666644 3678889999999654311 001112345666775 4 45676654
Q ss_pred C
Q psy17679 188 A 188 (303)
Q Consensus 188 ~ 188 (303)
.
T Consensus 153 ~ 153 (287)
T PRK08223 153 L 153 (287)
T ss_pred c
Confidence 4
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.029 Score=48.36 Aligned_cols=122 Identities=14% Similarity=0.096 Sum_probs=67.7
Q ss_pred ccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc---cHH-----HHHHHHHHhHHHhhhhccCcCcC
Q psy17679 39 QEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK---DIQ-----ERLDAIFEDRLFWRLRAEVPDFR 110 (303)
Q Consensus 39 ~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~---~~~-----~~l~~l~~~~~~~~~~~~~~~~~ 110 (303)
+..++.++|+|.| .|.+|+.+++.|...|.. ++++++.+.-.. ..+ ..+-..+......++.+-+|.
T Consensus 19 q~~L~~~~VlvvG-~GglGs~va~~La~~Gvg--~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~-- 93 (240)
T TIGR02355 19 QEALKASRVLIVG-LGGLGCAASQYLAAAGVG--NLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPH-- 93 (240)
T ss_pred HHHHhCCcEEEEC-cCHHHHHHHHHHHHcCCC--EEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCC--
Confidence 4567778999998 699999999999999754 577777653111 100 001001111111222222221
Q ss_pred CceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 111 SKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 111 ~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
.+++.+...++. .....++++.|+||.+... ......+-++|... + ..+|+.++.
T Consensus 94 v~i~~~~~~i~~-------~~~~~~~~~~DlVvd~~D~--------------~~~r~~ln~~~~~~-~-ip~v~~~~~ 148 (240)
T TIGR02355 94 IAINPINAKLDD-------AELAALIAEHDIVVDCTDN--------------VEVRNQLNRQCFAA-K-VPLVSGAAI 148 (240)
T ss_pred cEEEEEeccCCH-------HHHHHHhhcCCEEEEcCCC--------------HHHHHHHHHHHHHc-C-CCEEEEEec
Confidence 234444333332 2466778899999987652 11123345666665 4 467776554
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.045 Score=45.67 Aligned_cols=126 Identities=21% Similarity=0.211 Sum_probs=70.9
Q ss_pred CCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc---c-----HHHHHHHHHHhHHHhhhhcc
Q psy17679 34 IGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK---D-----IQERLDAIFEDRLFWRLRAE 105 (303)
Q Consensus 34 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~---~-----~~~~l~~l~~~~~~~~~~~~ 105 (303)
|+.+.+..++.++|+|.|+ |.+|.++++.|...|.. ++++++...-.. . ..+.+-+.+...+..++.+-
T Consensus 11 ~G~e~Q~~L~~s~VlIiG~-gglG~evak~La~~GVg--~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~l 87 (197)
T cd01492 11 WGLEAQKRLRSARILLIGL-KGLGAEIAKNLVLSGIG--SLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRAL 87 (197)
T ss_pred hCHHHHHHHHhCcEEEEcC-CHHHHHHHHHHHHcCCC--EEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHH
Confidence 4455556778899999985 56999999999999754 577776542110 0 00111111111222233333
Q ss_pred CcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEE
Q psy17679 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHV 185 (303)
Q Consensus 106 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~i 185 (303)
+|. .+++.+...+++ .....++++|+||.+... ... ...+-+.|.+. ++ .+|+.
T Consensus 88 Np~--v~i~~~~~~~~~--------~~~~~~~~~dvVi~~~~~------~~~--------~~~ln~~c~~~-~i-p~i~~ 141 (197)
T cd01492 88 NPR--VKVSVDTDDISE--------KPEEFFSQFDVVVATELS------RAE--------LVKINELCRKL-GV-KFYAT 141 (197)
T ss_pred CCC--CEEEEEecCccc--------cHHHHHhCCCEEEECCCC------HHH--------HHHHHHHHHHc-CC-CEEEE
Confidence 332 355555555542 234567899999976432 111 13345667775 44 67777
Q ss_pred eCC
Q psy17679 186 STA 188 (303)
Q Consensus 186 SS~ 188 (303)
++.
T Consensus 142 ~~~ 144 (197)
T cd01492 142 GVH 144 (197)
T ss_pred Eec
Confidence 776
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0067 Score=55.05 Aligned_cols=37 Identities=19% Similarity=0.365 Sum_probs=31.0
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
+|.|.||||++|..+++.|.+++|.+..+..+++..+
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~ 37 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRS 37 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEecccc
Confidence 5899999999999999999998888766766667643
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.033 Score=48.63 Aligned_cols=134 Identities=18% Similarity=0.216 Sum_probs=73.5
Q ss_pred CCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC---cccH-----HHHHHHHHHhHHHhhhhcc
Q psy17679 34 IGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK---GKDI-----QERLDAIFEDRLFWRLRAE 105 (303)
Q Consensus 34 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~---~~~~-----~~~l~~l~~~~~~~~~~~~ 105 (303)
|+.+.+..++..+|+|.| .|.+|+++++.|...|.. ++++++...- +.+. .+.+-..+...+.+++..-
T Consensus 20 ~G~e~~~kL~~s~VlVvG-~GGVGs~vae~Lar~GVg--~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~I 96 (268)
T PRK15116 20 YGEKALQLFADAHICVVG-IGGVGSWAAEALARTGIG--AITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQI 96 (268)
T ss_pred hCHHHHHHhcCCCEEEEC-cCHHHHHHHHHHHHcCCC--EEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhH
Confidence 444445567788999998 699999999999999743 4777766521 1110 0111111111222233332
Q ss_pred CcCcCCceEEEEecCCCCCCCCCHHHHHHHhc-cccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEE
Q psy17679 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVK-QVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVH 184 (303)
Q Consensus 106 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~-~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~ 184 (303)
+|. .+++.+..-++ + +....++. ++|+||.+.... ..-..|.+.|... + ..+|.
T Consensus 97 NP~--~~V~~i~~~i~-~------e~~~~ll~~~~D~VIdaiD~~--------------~~k~~L~~~c~~~-~-ip~I~ 151 (268)
T PRK15116 97 NPE--CRVTVVDDFIT-P------DNVAEYMSAGFSYVIDAIDSV--------------RPKAALIAYCRRN-K-IPLVT 151 (268)
T ss_pred CCC--cEEEEEecccC-h------hhHHHHhcCCCCEEEEcCCCH--------------HHHHHHHHHHHHc-C-CCEEE
Confidence 321 23444432222 2 14555554 799999886631 1223567788776 4 46776
Q ss_pred EeCCcccCCCC
Q psy17679 185 VSTAFTHCPRE 195 (303)
Q Consensus 185 iSS~~~~~~~~ 195 (303)
++.+++...+.
T Consensus 152 ~gGag~k~dp~ 162 (268)
T PRK15116 152 TGGAGGQIDPT 162 (268)
T ss_pred ECCcccCCCCC
Confidence 66665554443
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.03 Score=52.82 Aligned_cols=36 Identities=14% Similarity=0.207 Sum_probs=31.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
+++|+|+|||+.| +|...++.|.+.|+. |.+.++..
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~---V~~~d~~~ 38 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGAN---VTVNDGKP 38 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCCE---EEEEcCCC
Confidence 3578999999877 999999999999998 88887764
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.085 Score=46.05 Aligned_cols=116 Identities=16% Similarity=0.052 Sum_probs=71.2
Q ss_pred EEEeCCcchhHHHHHHHHHhcCC-CccEEEEEeCCCCcccHH-HHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCP-HLKHIYLLVRPKKGKDIQ-ERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~-~v~~V~~~~R~~~~~~~~-~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|.|.||.|.+|..++..|+..|. ....|.++++++...... ..+++.... . ....+.. ++
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~------------~-~~~~i~~---~~-- 62 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEP------------L-ADIKVSI---TD-- 62 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhh------------c-cCcEEEE---CC--
Confidence 57899989999999999998871 224588888876433211 111111100 0 0112221 11
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVS 186 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iS 186 (303)
++...++++|+||.+++.... ..........|+.-.+.+.+.+.+......++.+|
T Consensus 63 ------d~~~~~~~aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t 119 (263)
T cd00650 63 ------DPYEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS 119 (263)
T ss_pred ------chHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 356777899999999997543 33344566678888888888888773233445443
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.098 Score=41.03 Aligned_cols=115 Identities=18% Similarity=0.199 Sum_probs=63.2
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCccc---H-----HHHHHHHHHhHHHhhhhccCcCcCCceEEEE
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKD---I-----QERLDAIFEDRLFWRLRAEVPDFRSKVSAVA 117 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~---~-----~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~ 117 (303)
+|+|.| .|.+|..+++.|...|.. ++++++...-... . .+.+-+-+...+..++..-.| ..+++.+.
T Consensus 1 ~VliiG-~GglGs~ia~~L~~~Gv~--~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p--~v~i~~~~ 75 (143)
T cd01483 1 RVLLVG-LGGLGSEIALNLARSGVG--KITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNP--GVNVTAVP 75 (143)
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCC--EEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCC--CcEEEEEe
Confidence 589998 599999999999999874 4777765421000 0 000000011111112222221 13444555
Q ss_pred ecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 118 GDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
.++.+. .....++++|+||.+... ......+.++|++. + ..+|..++.
T Consensus 76 ~~~~~~-------~~~~~~~~~diVi~~~d~--------------~~~~~~l~~~~~~~-~-i~~i~~~~~ 123 (143)
T cd01483 76 EGISED-------NLDDFLDGVDLVIDAIDN--------------IAVRRALNRACKEL-G-IPVIDAGGL 123 (143)
T ss_pred eecChh-------hHHHHhcCCCEEEECCCC--------------HHHHHHHHHHHHHc-C-CCEEEEcCC
Confidence 554432 235667899999988663 12224566777776 4 457776666
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.0095 Score=45.49 Aligned_cols=35 Identities=20% Similarity=0.556 Sum_probs=29.4
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
||.|+||||++|..+++.|.+. ..+..+.++.|+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~h-p~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEH-PDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-STEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcC-CCccEEEeeeecc
Confidence 6999999999999999999985 5666677777766
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.017 Score=46.91 Aligned_cols=37 Identities=16% Similarity=0.255 Sum_probs=31.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
.+.+++|+|.|+.+.+|..+++.|.+.|.. |+++.|.
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~---V~v~~r~ 77 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNAT---VTVCHSK 77 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCE---EEEEECC
Confidence 467899999998777899999999999875 7777773
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.16 Score=46.32 Aligned_cols=118 Identities=12% Similarity=0.119 Sum_probs=74.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
+||.|+|+ |.+|++++..|+..+. ...+..++..+.... ....++. +. .+ ......+. +. .
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l-~~el~LiDi~~~~~~--g~a~DL~-~~--------~~-~~~~~~i~-~~-~--- 98 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDL-ADELALVDVNPDKLR--GEMLDLQ-HA--------AA-FLPRTKIL-AS-T--- 98 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCCchhh--HHHHHHH-hh--------hh-cCCCCEEE-eC-C---
Confidence 69999995 9999999999988754 245888888654321 1111111 10 00 01122222 11 1
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
++. .++++|+||-+||... ...+..+++..|+.-.+.+.+.+.+......+|.+|..
T Consensus 99 ------dy~-~~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtNP 156 (350)
T PLN02602 99 ------DYA-VTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSNP 156 (350)
T ss_pred ------CHH-HhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 122 3688999999999754 34566788888999899999888887333456666644
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.17 Score=45.50 Aligned_cols=119 Identities=11% Similarity=0.082 Sum_probs=74.1
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
+.+||.|.| .|.+|+.++..++..|. ..|.++++++.... .+.++..-. .. ......++... +
T Consensus 5 ~~~KI~IIG-aG~vG~~ia~~la~~gl--~~i~LvDi~~~~~~-~~~ld~~~~------~~----~~~~~~~I~~~--~- 67 (321)
T PTZ00082 5 KRRKISLIG-SGNIGGVMAYLIVLKNL--GDVVLFDIVKNIPQ-GKALDISHS------NV----IAGSNSKVIGT--N- 67 (321)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCC--CeEEEEeCCCchhh-HHHHHHHhh------hh----ccCCCeEEEEC--C-
Confidence 447899999 59999999999988875 23888898776432 112111100 00 00011222210 1
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccc-cc-----cHHHHHhhhHHHHHHHHHHHHhcCCCc-eEEEEeCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRF-DE-----HIKMAVKINVCGVQAMLQLAREMKDLK-AFVHVSTA 188 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~-----~~~~~~~~N~~~~~~ll~~a~~~~~~~-r~i~iSS~ 188 (303)
++ +.++++|+||.+++.... .. +..+.+..|+.-.+.+.+.+.+. ..+ .++.+|..
T Consensus 68 --------d~-~~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~-~p~a~~iv~sNP 130 (321)
T PTZ00082 68 --------NY-EDIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKY-CPNAFVIVITNP 130 (321)
T ss_pred --------CH-HHhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCc
Confidence 23 356899999999987542 22 45567777888888888888877 433 67777765
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.012 Score=46.70 Aligned_cols=38 Identities=18% Similarity=0.282 Sum_probs=30.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.++++++|+|+ |.+|..++..|.+.| ...|++.+|+..
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g--~~~v~v~~r~~~ 54 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG--AAKIVIVNRTLE 54 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEcCCHH
Confidence 45688999996 999999999999886 224888888643
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.18 Score=45.15 Aligned_cols=116 Identities=11% Similarity=0.101 Sum_probs=73.9
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCc-CCceEEEEecCCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDF-RSKVSAVAGDCSLPG 124 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~ 124 (303)
||.|.|+ |.+|.+++..|+..+. ...+.+++..+.... ....++.- ..+-. ..++++..+|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~-~~elvL~Di~~~~a~--g~a~DL~~---------~~~~~~~~~~~i~~~~----- 62 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGL-FSEIVLIDVNEGVAE--GEALDFHH---------ATALTYSTNTKIRAGD----- 62 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCcchhh--HHHHHHHh---------hhccCCCCCEEEEECC-----
Confidence 5889997 9999999999998754 345888888654322 11111111 00000 0133444333
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccc-ccc--HHHHHhhhHHHHHHHHHHHHhcCCCc-eEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRF-DEH--IKMAVKINVCGVQAMLQLAREMKDLK-AFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~--~~~~~~~N~~~~~~ll~~a~~~~~~~-r~i~iSS~ 188 (303)
...++++|+||-+||...- ..+ ..+++..|..-.+.+.+.+.++ +.. .++.+|..
T Consensus 63 --------y~~~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~-~p~~i~ivvsNP 121 (307)
T cd05290 63 --------YDDCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKV-TKEAVIILITNP 121 (307)
T ss_pred --------HHHhCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEecCc
Confidence 2456789999999998543 334 4788899999999999999888 443 34444444
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.037 Score=51.29 Aligned_cols=127 Identities=13% Similarity=0.065 Sum_probs=70.9
Q ss_pred CCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC---cccHH-----HHHHHHHHhHHHhhhhcc
Q psy17679 34 IGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK---GKDIQ-----ERLDAIFEDRLFWRLRAE 105 (303)
Q Consensus 34 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~---~~~~~-----~~l~~l~~~~~~~~~~~~ 105 (303)
|+...+..++..+|+|.| .|.+|..+++.|...|.. .+++++...- +...+ +.+-+.+......++.+-
T Consensus 32 ~g~~~q~~L~~~~VlviG-~GGlGs~va~~La~~Gvg--~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~ 108 (392)
T PRK07878 32 VGVDGQKRLKNARVLVIG-AGGLGSPTLLYLAAAGVG--TLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEI 108 (392)
T ss_pred cCHHHHHHHhcCCEEEEC-CCHHHHHHHHHHHHcCCC--eEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHh
Confidence 444555667888999998 689999999999999764 4766665421 10000 001001111112223322
Q ss_pred CcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEE
Q psy17679 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHV 185 (303)
Q Consensus 106 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~i 185 (303)
+|. .+++.+...++.. ....+++++|+||.+... +..-..+-++|... + ..||+.
T Consensus 109 np~--v~i~~~~~~i~~~-------~~~~~~~~~D~Vvd~~d~--------------~~~r~~ln~~~~~~-~-~p~v~~ 163 (392)
T PRK07878 109 NPL--VNVRLHEFRLDPS-------NAVELFSQYDLILDGTDN--------------FATRYLVNDAAVLA-G-KPYVWG 163 (392)
T ss_pred CCC--cEEEEEeccCChh-------HHHHHHhcCCEEEECCCC--------------HHHHHHHHHHHHHc-C-CCEEEE
Confidence 321 3455555555432 356778899999977542 11112344666665 4 457776
Q ss_pred eCC
Q psy17679 186 STA 188 (303)
Q Consensus 186 SS~ 188 (303)
+..
T Consensus 164 ~~~ 166 (392)
T PRK07878 164 SIY 166 (392)
T ss_pred Eec
Confidence 665
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.07 Score=45.67 Aligned_cols=127 Identities=18% Similarity=0.171 Sum_probs=69.9
Q ss_pred CCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHH--------HHHHH-HHHhHHHhhhhc
Q psy17679 34 IGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQ--------ERLDA-IFEDRLFWRLRA 104 (303)
Q Consensus 34 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~--------~~l~~-l~~~~~~~~~~~ 104 (303)
|+.+.+..+++++|+|.| +|.+|+++++.|...|.. ++++++...-..... +.+.. .+......++..
T Consensus 17 ~g~~~q~~L~~~~VlIiG-~GGlGs~ia~~La~~Gvg--~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~ 93 (231)
T PRK08328 17 FGVEGQEKLKKAKVAVVG-VGGLGSPVAYYLAAAGVG--RILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLER 93 (231)
T ss_pred cCHHHHHHHhCCcEEEEC-CCHHHHHHHHHHHHcCCC--EEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHH
Confidence 334455667788999998 689999999999999754 577776543111000 00000 000011112222
Q ss_pred cCcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEE
Q psy17679 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVH 184 (303)
Q Consensus 105 ~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~ 184 (303)
-+|. -.++.+...+++. ....+++++|+||.+.-.. .....+-++|... + ..+|+
T Consensus 94 ~np~--v~v~~~~~~~~~~-------~~~~~l~~~D~Vid~~d~~--------------~~r~~l~~~~~~~-~-ip~i~ 148 (231)
T PRK08328 94 FNSD--IKIETFVGRLSEE-------NIDEVLKGVDVIVDCLDNF--------------ETRYLLDDYAHKK-G-IPLVH 148 (231)
T ss_pred hCCC--CEEEEEeccCCHH-------HHHHHHhcCCEEEECCCCH--------------HHHHHHHHHHHHc-C-CCEEE
Confidence 2222 3455555544332 4566788999999875521 1112334566665 4 45777
Q ss_pred EeCC
Q psy17679 185 VSTA 188 (303)
Q Consensus 185 iSS~ 188 (303)
.++.
T Consensus 149 g~~~ 152 (231)
T PRK08328 149 GAVE 152 (231)
T ss_pred Eeec
Confidence 6666
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.052 Score=49.84 Aligned_cols=102 Identities=20% Similarity=0.260 Sum_probs=61.1
Q ss_pred CCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC---CcccHH-----HHHHHHHHhHHHhhhhcc
Q psy17679 34 IGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK---KGKDIQ-----ERLDAIFEDRLFWRLRAE 105 (303)
Q Consensus 34 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~---~~~~~~-----~~l~~l~~~~~~~~~~~~ 105 (303)
|+.+.+..++..+|+|.| .|.+|..+++.|...|.. ++++++.+. ++...+ +.+-..+...+..++.+-
T Consensus 31 ~g~~~q~~l~~~~VliiG-~GglG~~v~~~La~~Gvg--~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~ 107 (370)
T PRK05600 31 FGIEQQERLHNARVLVIG-AGGLGCPAMQSLASAGVG--TITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEI 107 (370)
T ss_pred hCHHHHHHhcCCcEEEEC-CCHHHHHHHHHHHHcCCC--EEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHH
Confidence 444556677889999998 689999999999999753 477777752 111100 111111112222233333
Q ss_pred CcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcce
Q psy17679 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAA 147 (303)
Q Consensus 106 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~ 147 (303)
++. .+++.+...++.. ....+++++|+||.+..
T Consensus 108 np~--v~i~~~~~~i~~~-------~~~~~~~~~DlVid~~D 140 (370)
T PRK05600 108 QPD--IRVNALRERLTAE-------NAVELLNGVDLVLDGSD 140 (370)
T ss_pred CCC--CeeEEeeeecCHH-------HHHHHHhCCCEEEECCC
Confidence 332 3555665555432 46678899999998865
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.037 Score=50.41 Aligned_cols=23 Identities=22% Similarity=0.533 Sum_probs=21.1
Q ss_pred cEEEEeCCcchhHHHHHHHHHhc
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRS 67 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~ 67 (303)
++|.|.||||++|..+++.|.+.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~h 23 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNH 23 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC
Confidence 57999999999999999999865
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.018 Score=50.75 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=31.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
..++|+|+|.|++|.+|+.++..|++.|.. |+++.|
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gat---Vtv~~~ 191 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANAT---VTICHS 191 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCE---EEEEeC
Confidence 467899999999999999999999998775 777766
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.14 Score=41.80 Aligned_cols=90 Identities=19% Similarity=0.148 Sum_probs=52.4
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC---CcccHH----HHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK---KGKDIQ----ERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~---~~~~~~----~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
+|+|.| .|.+|+.+++.|...|.. ++++++.+. ++...+ +.+.+.+......++.+-+|. .+++.+..
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gvg--~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~--v~i~~~~~ 75 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGVG--NLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPF--VKIEAINI 75 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCC--eEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCC--CEEEEEEe
Confidence 589998 699999999999999764 577777764 111100 111111111122233332322 35555655
Q ss_pred cCCCCCCCCCHHHHHHHhccccEEEEcce
Q psy17679 119 DCSLPGLGLSETDRATLVKQVNIVFHGAA 147 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~ 147 (303)
.+... .....++++|+||.+..
T Consensus 76 ~~~~~-------~~~~~l~~~DlVi~~~d 97 (174)
T cd01487 76 KIDEN-------NLEGLFGDCDIVVEAFD 97 (174)
T ss_pred ecChh-------hHHHHhcCCCEEEECCC
Confidence 55442 46677889999998843
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.098 Score=46.77 Aligned_cols=118 Identities=19% Similarity=0.112 Sum_probs=72.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|.|+ |.+|..++..|...|+. .|.++++.+..... ...++...... ... ...+.-..
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~--~VvlvDi~~~l~~g--~a~d~~~~~~~-----------~~~---~~~i~~t~ 62 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELA--DLVLLDVVEGIPQG--KALDMYEASPV-----------GGF---DTKVTGTN 62 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCC--eEEEEeCCCChhHH--HHHhhhhhhhc-----------cCC---CcEEEecC
Confidence 57999995 99999999999998762 38888886542221 11111111100 000 01111000
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
++.. ++++|+||-++|.... ..+..+.+..|..-...+++.+.+......+|.+|..
T Consensus 63 ------d~~~-~~~aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tNP 120 (305)
T TIGR01763 63 ------NYAD-TANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSNP 120 (305)
T ss_pred ------CHHH-hCCCCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 2433 5789999999996542 3455677788988888888888776334456766665
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.047 Score=50.53 Aligned_cols=102 Identities=14% Similarity=0.100 Sum_probs=61.2
Q ss_pred CCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC---cccH-----HHHHHHHHHhHHHhhhhcc
Q psy17679 34 IGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK---GKDI-----QERLDAIFEDRLFWRLRAE 105 (303)
Q Consensus 34 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~---~~~~-----~~~l~~l~~~~~~~~~~~~ 105 (303)
|+.+.+..++..+|+|.| .|.+|..+++.|...|.. ++++++.+.- +... .+.+...+......++.+-
T Consensus 28 ~g~~~q~~L~~~~VlivG-~GGlG~~va~~La~~Gvg--~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~ 104 (390)
T PRK07411 28 VGLEGQKRLKAASVLCIG-TGGLGSPLLLYLAAAGIG--RIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEI 104 (390)
T ss_pred cCHHHHHHHhcCcEEEEC-CCHHHHHHHHHHHHcCCC--EEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHH
Confidence 344455677889999998 689999999999999754 4766666421 1110 1111111112222333333
Q ss_pred CcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcce
Q psy17679 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAA 147 (303)
Q Consensus 106 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~ 147 (303)
+|. .+++.+...++.. ....++.++|+||.+..
T Consensus 105 np~--v~v~~~~~~~~~~-------~~~~~~~~~D~Vvd~~d 137 (390)
T PRK07411 105 NPY--CQVDLYETRLSSE-------NALDILAPYDVVVDGTD 137 (390)
T ss_pred CCC--CeEEEEecccCHH-------hHHHHHhCCCEEEECCC
Confidence 332 4566666665543 35677889999998865
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.047 Score=48.36 Aligned_cols=38 Identities=21% Similarity=0.207 Sum_probs=31.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.++++++|.|+ |+.+++++..|...|.. +|+++.|+..
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~--~i~i~nRt~~ 159 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGLK--EIKLFNRRDE 159 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCC--EEEEEeCCcc
Confidence 45689999995 77799999999988753 5999999754
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.16 Score=46.71 Aligned_cols=124 Identities=13% Similarity=0.081 Sum_probs=75.1
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCcc-----EEEEE--eCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCc
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLK-----HIYLL--VRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSK 112 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~-----~V~~~--~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 112 (303)
.+.+.-||.|+|++|.+|++++..|+..|.- . .++.+ +++.+... ....++. +..+ ....+
T Consensus 40 ~~~~p~KV~IIGAaG~VG~~~A~~l~~~~l~-~~~~ei~L~L~diD~~~~~a~--g~a~DL~-d~a~--------~~~~~ 107 (387)
T TIGR01757 40 SWKKTVNVAVSGAAGMISNHLLFMLASGEVF-GQDQPIALKLLGSERSKEALE--GVAMELE-DSLY--------PLLRE 107 (387)
T ss_pred cCCCCeEEEEECCCcHHHHHHHHHHHhcccc-CCCCceEEEEeccCccchhhh--HHHHHHH-Hhhh--------hhcCc
Confidence 3444568999999999999999999887531 1 13233 55443221 1111111 1000 00112
Q ss_pred eEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcC-CCceEEEEeCC
Q psy17679 113 VSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMK-DLKAFVHVSTA 188 (303)
Q Consensus 113 v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~-~~~r~i~iSS~ 188 (303)
+.+..+| ...++++|+||-+||... ...+..+.+..|+.-.+.+...+.+.. ...++|.+|..
T Consensus 108 v~i~~~~-------------y~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNP 172 (387)
T TIGR01757 108 VSIGIDP-------------YEVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNP 172 (387)
T ss_pred eEEecCC-------------HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence 2211111 355688999999999864 345677889999999999999998852 23456666654
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.022 Score=50.99 Aligned_cols=34 Identities=15% Similarity=0.276 Sum_probs=30.6
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
++|.|+| .|.+|..++..|++.|++ |++.+|++.
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~---V~v~d~~~~ 36 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHE---VRLWDADPA 36 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCe---eEEEeCCHH
Confidence 5799999 899999999999999997 999999754
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.021 Score=50.56 Aligned_cols=37 Identities=14% Similarity=0.238 Sum_probs=32.0
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+.+++|+|+|. |.+|+.+++.|...|.+ |++..|++
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~---V~v~~R~~ 184 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGAR---VFVGARSS 184 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 356799999995 88999999999999876 88999874
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.029 Score=52.88 Aligned_cols=77 Identities=14% Similarity=0.202 Sum_probs=52.9
Q ss_pred ccCCcEEEEeCC----------------cchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhc
Q psy17679 41 FYRDKTIFLTGG----------------TGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104 (303)
Q Consensus 41 ~~~~~~vlItGa----------------tG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~ 104 (303)
.+++|+||||+| ||-.|.+|++.+..+|.+ |+.+.-+.+.
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~---VtlI~Gp~~~--------------------- 308 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAE---VTLISGPVDL--------------------- 308 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCc---EEEEeCCcCC---------------------
Confidence 378899999987 577899999999999999 6666543220
Q ss_pred cCcCcCCceEEEEecCCCCCCCCCHHHHHHHhc---cccEEEEcceecccc
Q psy17679 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATLVK---QVNIVFHGAATVRFD 152 (303)
Q Consensus 105 ~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~---~~dvVi~~a~~~~~~ 152 (303)
....+++++..+-.+ ++..++. ..|++|++|++.++.
T Consensus 309 ---~~p~~v~~i~V~ta~--------eM~~av~~~~~~Di~I~aAAVaDyr 348 (475)
T PRK13982 309 ---ADPQGVKVIHVESAR--------QMLAAVEAALPADIAIFAAAVADWR 348 (475)
T ss_pred ---CCCCCceEEEecCHH--------HHHHHHHhhCCCCEEEEecccccee
Confidence 011456666654222 3333332 479999999998764
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.053 Score=41.61 Aligned_cols=36 Identities=25% Similarity=0.454 Sum_probs=29.0
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
+||.|.|++|-.|+.+++.+.+. ..+.-+-+++|++
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCC
Confidence 58999999999999999999995 2333466777776
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.041 Score=49.29 Aligned_cols=116 Identities=20% Similarity=0.171 Sum_probs=71.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|.|+ |.+|..++..|...|. ...|.+++++..... ....++... . .........-+
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~-~~ev~l~D~~~~~~~--g~a~dl~~~---------~-~~~~~~~i~~~------ 60 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGL-ASEIVLVDINKAKAE--GEAMDLAHG---------T-PFVKPVRIYAG------ 60 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC-CCEEEEEECCchhhh--hHHHHHHcc---------c-cccCCeEEeeC------
Confidence 47999996 9999999999999873 234889998754321 111111100 0 00011111111
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVST 187 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS 187 (303)
++ ..++++|+||-+++... ...+...++..|+.-...+.+.+.+......++.++.
T Consensus 61 ------d~-~~l~~aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tN 117 (308)
T cd05292 61 ------DY-ADCKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTN 117 (308)
T ss_pred ------CH-HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 13 34689999999999754 2345667788899888888888888732334444443
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.024 Score=46.44 Aligned_cols=39 Identities=26% Similarity=0.272 Sum_probs=33.1
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..+.+++|.|.| .|-||+.+++.|...|.+ |++.+|...
T Consensus 32 ~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~---V~~~d~~~~ 70 (178)
T PF02826_consen 32 RELRGKTVGIIG-YGRIGRAVARRLKAFGMR---VIGYDRSPK 70 (178)
T ss_dssp S-STTSEEEEES-TSHHHHHHHHHHHHTT-E---EEEEESSCH
T ss_pred cccCCCEEEEEE-EcCCcCeEeeeeecCCce---eEEecccCC
Confidence 357789999998 799999999999999987 999999764
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.023 Score=51.58 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=31.0
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
.+++|.|.||||++|..+++.|.+++|.+..+..++..
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~ 43 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASA 43 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEcc
Confidence 34789999999999999999999887766666666554
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.012 Score=51.88 Aligned_cols=37 Identities=24% Similarity=0.338 Sum_probs=31.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.++++|+|+|+ |.+|++++..|...|. .+|+++.|+.
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~--~~V~v~~R~~ 157 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGV--AEITIVNRTV 157 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence 45689999996 9999999999999873 2499999974
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.034 Score=48.96 Aligned_cols=36 Identities=19% Similarity=0.297 Sum_probs=31.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++++|+|+|+++.+|+.++..|..+|.. |+++.+
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gat---Vtv~~s 190 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNAS---VTILHS 190 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCe---EEEEeC
Confidence 478899999999999999999999999877 777665
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.028 Score=51.10 Aligned_cols=34 Identities=21% Similarity=0.401 Sum_probs=26.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
+++|.|.||||++|..+++.|.+. .. ..+..+.+
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~-p~-~elv~v~~ 35 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNH-PE-VEIVAVTS 35 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcC-CC-ceEEEEEC
Confidence 479999999999999999999876 12 23555555
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.077 Score=39.80 Aligned_cols=70 Identities=19% Similarity=0.337 Sum_probs=48.0
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLG 126 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~ 126 (303)
|+|.| .|-+|+.+++.|.+.+.. |.++.+++. ..+.+.+ ..+.++.||.++.+
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~~~~---vvvid~d~~------~~~~~~~---------------~~~~~i~gd~~~~~-- 53 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEGGID---VVVIDRDPE------RVEELRE---------------EGVEVIYGDATDPE-- 53 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSE---EEEEESSHH------HHHHHHH---------------TTSEEEES-TTSHH--
T ss_pred eEEEc-CCHHHHHHHHHHHhCCCE---EEEEECCcH------HHHHHHh---------------cccccccccchhhh--
Confidence 57888 578999999999997545 888888743 2222222 46889999999976
Q ss_pred CCHHHHHHH-hccccEEEEcce
Q psy17679 127 LSETDRATL-VKQVNIVFHGAA 147 (303)
Q Consensus 127 ~~~~~~~~~-~~~~dvVi~~a~ 147 (303)
.+.++ +++++.|+-+..
T Consensus 54 ----~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 54 ----VLERAGIEKADAVVILTD 71 (116)
T ss_dssp ----HHHHTTGGCESEEEEESS
T ss_pred ----HHhhcCccccCEEEEccC
Confidence 45544 347887775544
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.037 Score=48.22 Aligned_cols=37 Identities=22% Similarity=0.400 Sum_probs=26.8
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
+++|.|+|++|.+|+.+++.+.+. ..+.-+.++++.+
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~-~~~elvav~d~~~ 37 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAA-EDLELVAAVDRPG 37 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCC
Confidence 368999999999999999888765 2233355555554
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.069 Score=53.09 Aligned_cols=128 Identities=11% Similarity=0.003 Sum_probs=73.8
Q ss_pred CccccccCCcEEEEeCCcchhHHHHHHHHHhcCC-CccEEEEEeCCC---CcccHH----HHHHHHHHhHHHhhhhccCc
Q psy17679 36 TPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCP-HLKHIYLLVRPK---KGKDIQ----ERLDAIFEDRLFWRLRAEVP 107 (303)
Q Consensus 36 ~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~-~v~~V~~~~R~~---~~~~~~----~~l~~l~~~~~~~~~~~~~~ 107 (303)
.+-+..+++.+|+|.|+ | +|++++..|...|- . ++++++... ++.+.+ ..+-..+..-...++.+-+|
T Consensus 99 ~~~Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG--~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp 174 (722)
T PRK07877 99 AEEQERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCG--ELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDP 174 (722)
T ss_pred HHHHHHHhcCCEEEEEe-c-HHHHHHHHHHHccCCC--eEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCC
Confidence 33445677899999998 7 99999999999873 3 366666642 111110 00111111112223333333
Q ss_pred CcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy17679 108 DFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVST 187 (303)
Q Consensus 108 ~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS 187 (303)
..+++.+...++.. .+..+++++|+||.|.- |+..-..+-++|.+. + ..+|+-++
T Consensus 175 --~i~v~~~~~~i~~~-------n~~~~l~~~DlVvD~~D--------------~~~~R~~ln~~a~~~-~-iP~i~~~~ 229 (722)
T PRK07877 175 --YLPVEVFTDGLTED-------NVDAFLDGLDVVVEECD--------------SLDVKVLLREAARAR-R-IPVLMATS 229 (722)
T ss_pred --CCEEEEEeccCCHH-------HHHHHhcCCCEEEECCC--------------CHHHHHHHHHHHHHc-C-CCEEEEcC
Confidence 24666666666632 57888899999998854 222222344666665 3 46777776
Q ss_pred CcccC
Q psy17679 188 AFTHC 192 (303)
Q Consensus 188 ~~~~~ 192 (303)
..+..
T Consensus 230 ~~g~~ 234 (722)
T PRK07877 230 DRGLL 234 (722)
T ss_pred CCCCc
Confidence 65443
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.75 Score=44.43 Aligned_cols=116 Identities=17% Similarity=0.258 Sum_probs=66.7
Q ss_pred cCCcEEEEeCCc-chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGT-GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGat-G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
..++.++||||+ |.||..++..|++-|-. |++...+=+ ....+.-+.|+.+ . ......+-++..++
T Consensus 394 y~d~valVTGA~~gSIaa~Vv~~LL~gGAt---VI~TTS~~s-~~r~efyr~LYa~-----~----a~~ga~LwvVpaN~ 460 (866)
T COG4982 394 YGDKVALVTGASKGSIAAAVVARLLAGGAT---VIATTSRLS-EERTEFYRSLYAR-----H----ARYGAALWVVPANM 460 (866)
T ss_pred cccceEEEecCCCcchHHHHHHHHHhCCcE---EEEEccccc-HHHHHHHHHHHHh-----h----CCCCceEEEEeccc
Confidence 456899999998 99999999999999987 655544322 2223332333322 1 22235566677776
Q ss_pred CCCCCCCCHHHHHHHhc---------------------cccEEEEcceecccc------ccHHHHHhhhHHHHHHHHHHH
Q psy17679 121 SLPGLGLSETDRATLVK---------------------QVNIVFHGAATVRFD------EHIKMAVKINVCGVQAMLQLA 173 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~---------------------~~dvVi~~a~~~~~~------~~~~~~~~~N~~~~~~ll~~a 173 (303)
.+.. ++..+++ .+|.+|-+|++.-.. ..-+...++=.+...+++-..
T Consensus 461 ~Sys------DVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl 534 (866)
T COG4982 461 GSYS------DVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGL 534 (866)
T ss_pred cchh------hHHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHh
Confidence 6654 3443332 357888888864221 111233333344556666555
Q ss_pred Hhc
Q psy17679 174 REM 176 (303)
Q Consensus 174 ~~~ 176 (303)
+..
T Consensus 535 ~~~ 537 (866)
T COG4982 535 KKQ 537 (866)
T ss_pred hhh
Confidence 443
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.24 Score=44.19 Aligned_cols=116 Identities=16% Similarity=0.073 Sum_probs=71.6
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLG 126 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~ 126 (303)
|.|.|+ |.+|.+++..|+..|. ...+.++++....... ...++ ....+. .....+..+ +
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~-~~el~l~D~~~~~~~g--~~~DL---------~~~~~~-~~~~~i~~~---~---- 59 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGL-ASELVLVDVNEEKAKG--DALDL---------SHASAF-LATGTIVRG---G---- 59 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCccHHHH--HHHhH---------HHhccc-cCCCeEEEC---C----
Confidence 467885 8999999999998863 2348888887543221 11111 100000 011122211 1
Q ss_pred CCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 127 LSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 127 ~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
++ ..++++|+||.++|... ...+....+..|+.-.+.+.+.+.+......++.+|..
T Consensus 60 ----~~-~~l~~aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sNP 117 (300)
T cd00300 60 ----DY-ADAADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSNP 117 (300)
T ss_pred ----CH-HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCh
Confidence 22 46789999999999754 34566788888999999999999887333455555543
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.2 Score=47.22 Aligned_cols=76 Identities=16% Similarity=0.219 Sum_probs=53.7
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+++|+|.|+ |.+|+.+++.|.+.|++ |+++++++. ..+.+... ..++.++.||.++
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~---v~vid~~~~------~~~~~~~~-------------~~~~~~i~gd~~~ 286 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGYS---VKLIERDPE------RAEELAEE-------------LPNTLVLHGDGTD 286 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCe---EEEEECCHH------HHHHHHHH-------------CCCCeEEECCCCC
Confidence 4688999996 99999999999998887 888887653 22222111 1467789999988
Q ss_pred CCCCCCHHHHHHH-hccccEEEEcce
Q psy17679 123 PGLGLSETDRATL-VKQVNIVFHGAA 147 (303)
Q Consensus 123 ~~~~~~~~~~~~~-~~~~dvVi~~a~ 147 (303)
.. .+.++ ++++|.||-+..
T Consensus 287 ~~------~L~~~~~~~a~~vi~~~~ 306 (453)
T PRK09496 287 QE------LLEEEGIDEADAFIALTN 306 (453)
T ss_pred HH------HHHhcCCccCCEEEECCC
Confidence 65 45433 358898885543
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.042 Score=48.89 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=31.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+++|+|.|. |.+|..++..|...|.+ |++.+|++
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~---V~v~~r~~ 185 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALGAN---VTVGARKS 185 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCE---EEEEECCH
Confidence 45789999995 88999999999999876 88999874
|
|
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.069 Score=50.59 Aligned_cols=43 Identities=12% Similarity=0.325 Sum_probs=35.1
Q ss_pred CccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 36 TPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 36 ~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
++...+..+++|+|.| .|..|..+++.|.+.|++ |++.++++.
T Consensus 6 ~~~~~~~~~~~i~v~G-~G~sG~a~a~~L~~~G~~---V~~~D~~~~ 48 (458)
T PRK01710 6 NEFKKFIKNKKVAVVG-IGVSNIPLIKFLVKLGAK---VTAFDKKSE 48 (458)
T ss_pred HHHhhhhcCCeEEEEc-ccHHHHHHHHHHHHCCCE---EEEECCCCC
Confidence 3444556778999998 689999999999999997 888887653
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.05 Score=50.69 Aligned_cols=77 Identities=18% Similarity=0.333 Sum_probs=51.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+.+++|+|.|+ |..|+.++..|...|.. .|++..|+.. +.+.+... .....++.
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~--~I~V~nRt~~------ra~~La~~-------------~~~~~~~~---- 232 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPK--QIMLANRTIE------KAQKITSA-------------FRNASAHY---- 232 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCC--EEEEECCCHH------HHHHHHHH-------------hcCCeEec----
Confidence 56789999995 99999999999998753 5999999743 22222110 01111111
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF 151 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~ 151 (303)
..++...+.+.|+||++.+...+
T Consensus 233 -------~~~l~~~l~~aDiVI~aT~a~~~ 255 (414)
T PRK13940 233 -------LSELPQLIKKADIIIAAVNVLEY 255 (414)
T ss_pred -------HHHHHHHhccCCEEEECcCCCCe
Confidence 11567778899999999987543
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.27 Score=42.12 Aligned_cols=117 Identities=13% Similarity=0.101 Sum_probs=65.7
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC---cccHH-----HHHHHHHHhHHHhhhhccCcCcCCceEEEE
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK---GKDIQ-----ERLDAIFEDRLFWRLRAEVPDFRSKVSAVA 117 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~---~~~~~-----~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~ 117 (303)
||+|.| .|.+|..+++.|...|.. ++++++.+.= +...+ +.+-+.+..-+..++.+..|. -+++.+.
T Consensus 1 kVlvvG-~GGlG~eilk~La~~Gvg--~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~--v~i~~~~ 75 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMGFG--QIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPN--CKVVPYQ 75 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCC--eEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCC--CEEEEEe
Confidence 588998 699999999999999764 5777776531 11100 111111222222333333332 4566777
Q ss_pred ecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 118 GDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
.++++... .-...++++|+||.+.. |...-..+-+.+... + ..+|..++.
T Consensus 76 ~~i~~~~~-----~~~~f~~~~DvVi~a~D--------------n~~aR~~ln~~c~~~-~-iplI~~g~~ 125 (234)
T cd01484 76 NKVGPEQD-----FNDTFFEQFHIIVNALD--------------NIIARRYVNGMLIFL-I-VPLIESGTE 125 (234)
T ss_pred ccCChhhh-----chHHHHhCCCEEEECCC--------------CHHHHHHHHHHHHHc-C-CCEEEEccc
Confidence 77754320 12456789999998744 222223455666665 3 356666555
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.088 Score=47.42 Aligned_cols=88 Identities=16% Similarity=0.166 Sum_probs=56.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc-c------HHHHHHHHHHhHHHhhhhccCcCcCCce
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK-D------IQERLDAIFEDRLFWRLRAEVPDFRSKV 113 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~-~------~~~~l~~l~~~~~~~~~~~~~~~~~~~v 113 (303)
.+.+|+|.|.| .|-||+.+++.|...|.+ |++.++..+.. . ....++++++. ..+
T Consensus 139 el~gkTvGIiG-~G~IG~~va~~l~afgm~---v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~--------------sDi 200 (324)
T COG0111 139 ELAGKTVGIIG-LGRIGRAVAKRLKAFGMK---VIGYDPYSPRERAGVDGVVGVDSLDELLAE--------------ADI 200 (324)
T ss_pred cccCCEEEEEC-CCHHHHHHHHHHHhCCCe---EEEECCCCchhhhccccceecccHHHHHhh--------------CCE
Confidence 46789999998 799999999999999988 88988833221 1 12334455443 566
Q ss_pred EEEEecCCCCCCCCCHHHHHHHhccccEEEEcc
Q psy17679 114 SAVAGDCSLPGLGLSETDRATLVKQVNIVFHGA 146 (303)
Q Consensus 114 ~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a 146 (303)
..+..-+++..-++--.+.-..++.--++||++
T Consensus 201 v~lh~PlT~eT~g~i~~~~~a~MK~gailIN~a 233 (324)
T COG0111 201 LTLHLPLTPETRGLINAEELAKMKPGAILINAA 233 (324)
T ss_pred EEEcCCCCcchhcccCHHHHhhCCCCeEEEECC
Confidence 666666666655543333344444333555554
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.059 Score=43.25 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=27.4
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++|+|+|.|.++.+|+.++..|.++|.. |+.+..
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~at---Vt~~h~ 68 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGAT---VTICHS 68 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHTT-E---EEEE-T
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhCCCe---EEeccC
Confidence 378899999999999999999999999776 655443
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.34 Score=43.31 Aligned_cols=116 Identities=13% Similarity=0.175 Sum_probs=66.0
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc---c-----HHHHHHHHHHhHHHhhhhccCcCcCCceEEEE
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK---D-----IQERLDAIFEDRLFWRLRAEVPDFRSKVSAVA 117 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~---~-----~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~ 117 (303)
+|+|.| .|.+|..+++.|...|.. .+++++...-.. . ..+.+.+-+..-+..++.+.++. -+++.+.
T Consensus 1 kVlIVG-aGGlG~EiaKnLal~Gvg--~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~--v~V~~~~ 75 (312)
T cd01489 1 KVLVVG-AGGIGCELLKNLVLTGFG--EIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPN--VKIVAYH 75 (312)
T ss_pred CEEEEC-CCHHHHHHHHHHHHhcCC--eEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCC--CeEEEEe
Confidence 589998 599999999999999764 577777653110 0 00111111111222233333332 4666777
Q ss_pred ecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 118 GDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
.++.+.. .-...+++.|+||.+.-. ...-..+-+.|... + ..||..++.
T Consensus 76 ~~i~~~~------~~~~f~~~~DvVv~a~Dn--------------~~ar~~in~~c~~~-~-ip~I~~gt~ 124 (312)
T cd01489 76 ANIKDPD------FNVEFFKQFDLVFNALDN--------------LAARRHVNKMCLAA-D-VPLIESGTT 124 (312)
T ss_pred ccCCCcc------chHHHHhcCCEEEECCCC--------------HHHHHHHHHHHHHC-C-CCEEEEecC
Confidence 7777643 234677899999977542 12223444556654 3 456666655
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.085 Score=46.59 Aligned_cols=37 Identities=16% Similarity=0.104 Sum_probs=31.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.++++|+|.| +|..|++++..|.+.|.. +|+++.|+.
T Consensus 123 ~~~k~vlvlG-aGGaarai~~aL~~~G~~--~i~I~nRt~ 159 (282)
T TIGR01809 123 LAGFRGLVIG-AGGTSRAAVYALASLGVT--DITVINRNP 159 (282)
T ss_pred cCCceEEEEc-CcHHHHHHHHHHHHcCCC--eEEEEeCCH
Confidence 3568899998 599999999999999764 599999974
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.11 Score=45.83 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=31.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..+++|+|.| +|+.|++++..|...|.. +|+++.|+..
T Consensus 125 ~~~k~vlIlG-aGGaaraia~aL~~~G~~--~I~I~nR~~~ 162 (284)
T PRK12549 125 ASLERVVQLG-AGGAGAAVAHALLTLGVE--RLTIFDVDPA 162 (284)
T ss_pred ccCCEEEEEC-CcHHHHHHHHHHHHcCCC--EEEEECCCHH
Confidence 3557999999 588999999999998753 5999999743
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.058 Score=48.29 Aligned_cols=35 Identities=17% Similarity=0.393 Sum_probs=27.8
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
++||.|.||+|+.|..|++.|... .++. +...+.+
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~H-p~ve-~~~~ss~ 36 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGH-PDVE-LILISSR 36 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcC-CCeE-EEEeech
Confidence 578999999999999999999887 5554 5444443
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.059 Score=48.75 Aligned_cols=39 Identities=26% Similarity=0.358 Sum_probs=32.0
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
++++|.|.||||++|..+++.|.++.|.+..+..++...
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~ 41 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEE 41 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccC
Confidence 567999999999999999999998766666677776543
|
|
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.56 Score=41.81 Aligned_cols=114 Identities=16% Similarity=0.100 Sum_probs=71.2
Q ss_pred EeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCCCC
Q psy17679 49 LTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLS 128 (303)
Q Consensus 49 ItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~ 128 (303)
|.| .|.+|.+++..|+..+. ...+..+++.+.... ....++. + ..+....++.+.-+
T Consensus 1 iIG-aG~VG~~~a~~l~~~~l-~~el~L~Di~~~~~~--g~a~Dl~-~--------~~~~~~~~~~i~~~---------- 57 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQGI-ADEIVLIDINKDKAE--GEAMDLQ-H--------AASFLPTPKKIRSG---------- 57 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcCC-CCEEEEEeCCCChhh--HHHHHHH-H--------hhcccCCCeEEecC----------
Confidence 456 59999999999988754 345888888654322 1111111 1 00000112222211
Q ss_pred HHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 129 ETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 129 ~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
. ...++++|+||-+||... ...+..+.+..|..-.+.+.+.+.+......++.+|..
T Consensus 58 --~-~~~~~daDivVitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP 115 (299)
T TIGR01771 58 --D-YSDCKDADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNP 115 (299)
T ss_pred --C-HHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 1 246688999999999854 34566788999999999999999887334456666654
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.42 Score=42.24 Aligned_cols=124 Identities=13% Similarity=0.150 Sum_probs=70.7
Q ss_pred CCCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc---c-----HHHHHHHHHHhHHHhhhhc
Q psy17679 33 EIGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK---D-----IQERLDAIFEDRLFWRLRA 104 (303)
Q Consensus 33 ~~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~---~-----~~~~l~~l~~~~~~~~~~~ 104 (303)
.|+.+.+..++..+|||.| .|.+|..+++.|...|-. .|++.+...-.. . ..+.+.+.+......++.+
T Consensus 8 ~~G~eaq~kL~~s~VLIvG-~gGLG~EiaKnLalaGVg--~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~e 84 (286)
T cd01491 8 VLGHEAMKKLQKSNVLISG-LGGLGVEIAKNLILAGVK--SVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAE 84 (286)
T ss_pred ccCHHHHHHHhcCcEEEEc-CCHHHHHHHHHHHHcCCC--eEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHH
Confidence 3555566678889999998 689999999999999754 577766543100 0 0111212222223334444
Q ss_pred cCcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEE
Q psy17679 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVH 184 (303)
Q Consensus 105 ~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~ 184 (303)
-+|. .+++.+...+. ...+.+.|+||.+.. +... ...+-++|++. + ..||.
T Consensus 85 LNp~--V~V~~~~~~~~-----------~~~l~~fdvVV~~~~------~~~~--------~~~in~~c~~~-~-ipfI~ 135 (286)
T cd01491 85 LNPY--VPVTVSTGPLT-----------TDELLKFQVVVLTDA------SLED--------QLKINEFCHSP-G-IKFIS 135 (286)
T ss_pred HCCC--CEEEEEeccCC-----------HHHHhcCCEEEEecC------CHHH--------HHHHHHHHHHc-C-CEEEE
Confidence 3432 34445544421 245578899987743 1222 13455667765 4 46777
Q ss_pred EeCC
Q psy17679 185 VSTA 188 (303)
Q Consensus 185 iSS~ 188 (303)
..+.
T Consensus 136 a~~~ 139 (286)
T cd01491 136 ADTR 139 (286)
T ss_pred Eecc
Confidence 7665
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.088 Score=46.28 Aligned_cols=36 Identities=14% Similarity=0.160 Sum_probs=31.1
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++|+|+|.|.+..+|+.++..|+.+|.. |+.+.+
T Consensus 156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~at---Vtv~hs 191 (285)
T PRK10792 156 DTYGLNAVVVGASNIVGRPMSLELLLAGCT---VTVCHR 191 (285)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHCCCe---EEEEEC
Confidence 467899999999999999999999998776 766654
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.042 Score=46.57 Aligned_cols=35 Identities=29% Similarity=0.347 Sum_probs=30.7
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
|+|.|.||+|.+|.+++..|.+.|++ |.+.+|+++
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~---V~v~~r~~~ 35 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNK---IIIGSRDLE 35 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCE---EEEEEcCHH
Confidence 57999999999999999999999987 778888653
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.24 Score=41.44 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=30.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
.+++++|+|.|| |-+|...++.|++.|++ |+++++.
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~---V~VIs~~ 42 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAH---IVVISPE 42 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCe---EEEEcCC
Confidence 367899999996 99999999999999887 7777653
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.17 Score=40.64 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=28.4
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|++|.+.| .|-.|+.+++.|++.|++ |++.+|++
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~---v~~~d~~~ 34 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAGYE---VTVYDRSP 34 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTE---EEEEESSH
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcCCe---EEeeccch
Confidence 57899998 799999999999999998 88888874
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.36 Score=43.00 Aligned_cols=116 Identities=16% Similarity=0.078 Sum_probs=67.5
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLG 126 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~ 126 (303)
|.|.|+ |.+|..++..|...|.. .|+++++++....... + ++... ... ......+.. +.
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~--eV~L~Di~e~~~~g~~-~-dl~~~-----~~~----~~~~~~I~~---t~---- 59 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG--DVVLLDIVEGLPQGKA-L-DISQA-----API----LGSDTKVTG---TN---- 59 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc--EEEEEeCCCcHHHHHH-H-HHHHh-----hhh----cCCCeEEEE---cC----
Confidence 468897 99999999999887652 4999999864322111 1 11110 000 001112111 11
Q ss_pred CCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 127 LSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 127 ~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
++ ..++++|+||.+++.... .....+.+..|+.-.+.+++.+.+......+|.+|..
T Consensus 60 ----d~-~~l~dADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sNP 117 (300)
T cd01339 60 ----DY-EDIAGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTNP 117 (300)
T ss_pred ----CH-HHhCCCCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 22 236899999999987542 3344456666888788888888776223344555543
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.08 Score=47.34 Aligned_cols=38 Identities=21% Similarity=0.355 Sum_probs=30.6
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
+++|-|.||||.+|+.+++.|.++...+..+..+...+
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~r 38 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASAR 38 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEeccc
Confidence 46899999999999999999999756666566666544
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.048 Score=49.73 Aligned_cols=38 Identities=18% Similarity=0.207 Sum_probs=29.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|++++|.|+||||++|..+++.|.+... ..+..+.+++
T Consensus 1 ~~~~~V~I~GatG~iG~~l~~~L~~~p~--~el~~~~~s~ 38 (349)
T PRK08664 1 MMKLKVGILGATGMVGQRFVQLLANHPW--FEVTALAASE 38 (349)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHcCCC--ceEEEEEcCh
Confidence 3457999999999999999999986522 2466665554
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.11 Score=46.16 Aligned_cols=37 Identities=16% Similarity=0.237 Sum_probs=32.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
.+++|+|.|.|.+|.+|+.++..|++.|+. |+++.|.
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gat---Vtv~~~~ 192 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCS---VTVVHSR 192 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCE---EEEECCC
Confidence 478899999999999999999999999987 7777553
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.18 Score=45.29 Aligned_cols=37 Identities=24% Similarity=0.264 Sum_probs=32.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+++++|.|.| .|-||+.+++.|...|.+ |++.+|..
T Consensus 133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~---V~~~~~~~ 169 (312)
T PRK15469 133 HREDFTIGILG-AGVLGSKVAQSLQTWGFP---LRCWSRSR 169 (312)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHCCCE---EEEEeCCC
Confidence 46789999998 899999999999999887 88888754
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.43 Score=34.33 Aligned_cols=35 Identities=26% Similarity=0.377 Sum_probs=26.4
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEE-eCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLL-VRPK 81 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~-~R~~ 81 (303)
||.|.| +|-+|.+++..|++.|....+|+.. .|++
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~ 36 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSP 36 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSH
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcH
Confidence 467775 8999999999999998333448754 7764
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.16 Score=39.84 Aligned_cols=36 Identities=19% Similarity=0.307 Sum_probs=30.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++|+|+|.|.+.-+|..++..|.++|.. |+.+.+
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gat---V~~~~~ 60 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGAT---VYSCDW 60 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEeCC
Confidence 467899999999999999999999998776 666554
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.13 Score=45.29 Aligned_cols=36 Identities=17% Similarity=0.223 Sum_probs=30.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+.+++|+|.|.+..+|+.++..|+.+|.. |+++..
T Consensus 161 ~l~Gk~vvViGrs~iVGkPla~lL~~~~at---Vtv~hs 196 (287)
T PRK14176 161 DIEGKNAVIVGHSNVVGKPMAAMLLNRNAT---VSVCHV 196 (287)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHCCCE---EEEEec
Confidence 467899999999999999999999998776 655543
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.19 Score=45.31 Aligned_cols=34 Identities=15% Similarity=0.290 Sum_probs=27.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
+.+|||+||+|.+|...++-+...|.. +++.+.+
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~---~v~~~~s 176 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGAT---VVAVVSS 176 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCc---EEEEecC
Confidence 689999999999999999999888864 4454444
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.22 Score=45.07 Aligned_cols=37 Identities=24% Similarity=0.223 Sum_probs=32.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+.+|+|.|.| .|-||+.+++.|...|.+ |++.+|..
T Consensus 147 ~L~gktvgIiG-~G~IG~~vA~~l~~~G~~---V~~~d~~~ 183 (333)
T PRK13243 147 DVYGKTIGIIG-FGRIGQAVARRAKGFGMR---ILYYSRTR 183 (333)
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHHCCCE---EEEECCCC
Confidence 47889999998 699999999999999886 88888864
|
|
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=94.37 E-value=0.33 Score=37.44 Aligned_cols=35 Identities=17% Similarity=0.243 Sum_probs=27.4
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
|.|.|+||.||...++-+.+... ..+|.+++-+++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d-~f~v~~Lsa~~n 35 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPD-KFEVVALSAGSN 35 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTT-TEEEEEEEESST
T ss_pred CEEEcCCcHHHHHHHHHHHhCCC-ceEEEEEEcCCC
Confidence 67999999999999998888743 345777776554
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.37 E-value=0.19 Score=46.91 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=31.6
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..|+|.|.| .|++|..++..|.+.|++ |++.++++.
T Consensus 2 ~~~kI~VIG-lG~~G~~~A~~La~~G~~---V~~~D~~~~ 37 (415)
T PRK11064 2 SFETISVIG-LGYIGLPTAAAFASRQKQ---VIGVDINQH 37 (415)
T ss_pred CccEEEEEC-cchhhHHHHHHHHhCCCE---EEEEeCCHH
Confidence 457899998 799999999999999988 999998754
|
|
| >KOG1198|consensus | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.13 Score=46.90 Aligned_cols=29 Identities=17% Similarity=0.445 Sum_probs=25.3
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcC
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSC 68 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g 68 (303)
...++++|||.||+|.+|+..++-+...|
T Consensus 154 ~~~~g~~vLv~ggsggVG~~aiQlAk~~~ 182 (347)
T KOG1198|consen 154 KLSKGKSVLVLGGSGGVGTAAIQLAKHAG 182 (347)
T ss_pred ccCCCCeEEEEeCCcHHHHHHHHHHHhcC
Confidence 34667899999999999999998888876
|
|
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.33 E-value=0.22 Score=44.65 Aligned_cols=36 Identities=17% Similarity=0.141 Sum_probs=31.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
.+.+|+|.|.| .|-||+.+++.+...|.+ |.+.+|.
T Consensus 142 ~L~gktvGIiG-~G~IG~~vA~~~~~fgm~---V~~~d~~ 177 (311)
T PRK08410 142 EIKGKKWGIIG-LGTIGKRVAKIAQAFGAK---VVYYSTS 177 (311)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhhcCCE---EEEECCC
Confidence 57889999998 899999999999888877 8888875
|
|
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.36 Score=41.72 Aligned_cols=38 Identities=24% Similarity=0.433 Sum_probs=31.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
++||.|.|++|-.|+.+++.+.+.. ++.-+-++.|.++
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~-~~~L~aa~~~~~~ 39 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAP-DLELVAAFDRPGS 39 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCC-CceEEEEEecCCc
Confidence 5789999999999999999998883 4445677777754
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.14 Score=45.12 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=30.0
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEe
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLV 78 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~ 78 (303)
.+++++|+|.|.++.+|+.++..|+++|.. |+++.
T Consensus 155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~at---Vt~~h 189 (285)
T PRK14189 155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGAT---VTICH 189 (285)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCE---EEEec
Confidence 467899999999999999999999998776 66543
|
|
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.13 Score=45.19 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=30.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++|+|+|.|.+..+|+.++..|+++|.. |+++.+
T Consensus 152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aT---Vtichs 187 (287)
T PRK14173 152 PLAGKEVVVVGRSNIVGKPLAALLLREDAT---VTLAHS 187 (287)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCE---EEEeCC
Confidence 477899999999999999999999998766 666544
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.13 Score=47.31 Aligned_cols=76 Identities=16% Similarity=0.195 Sum_probs=49.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+...+|+|+|+ |-+|...++.|...|.+ |++++|+... .+.+...+ .. .+..+..
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~---V~v~d~~~~~---~~~l~~~~----------------g~--~v~~~~~ 219 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGAT---VTILDINIDR---LRQLDAEF----------------GG--RIHTRYS 219 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCe---EEEEECCHHH---HHHHHHhc----------------Cc--eeEeccC
Confidence 45678999985 99999999999999876 8888886421 11111110 01 1122223
Q ss_pred CCCCCCCHHHHHHHhccccEEEEccee
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAAT 148 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~ 148 (303)
+. ..+.+.+.+.|+||++++.
T Consensus 220 ~~------~~l~~~l~~aDvVI~a~~~ 240 (370)
T TIGR00518 220 NA------YEIEDAVKRADLLIGAVLI 240 (370)
T ss_pred CH------HHHHHHHccCCEEEEcccc
Confidence 22 2577778899999998865
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.36 Score=41.15 Aligned_cols=117 Identities=17% Similarity=0.241 Sum_probs=64.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC---CcccHHHHHHHHHH-------hHHHhhhhccCcCcCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK---KGKDIQERLDAIFE-------DRLFWRLRAEVPDFRS 111 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~---~~~~~~~~l~~l~~-------~~~~~~~~~~~~~~~~ 111 (303)
++..+|+|.| .|++|+..++.|.+.|.. ++.+++-.. ++.+ ..+.+++. .-+.+++.. ..+
T Consensus 28 l~~~~V~VvG-iGGVGSw~veALaRsGig--~itlID~D~v~vTN~N--RQi~A~~~~iGk~Kv~vm~eri~~----InP 98 (263)
T COG1179 28 LKQAHVCVVG-IGGVGSWAVEALARSGIG--RITLIDMDDVCVTNTN--RQIHALLGDIGKPKVEVMKERIKQ----INP 98 (263)
T ss_pred HhhCcEEEEe-cCchhHHHHHHHHHcCCC--eEEEEecccccccccc--hhhHhhhhhcccHHHHHHHHHHHh----hCC
Confidence 3446899998 699999999999999865 355554432 1111 01111111 111122222 224
Q ss_pred ceEEEEecCCCCCCCCCHHHHHHHhc-cccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy17679 112 KVSAVAGDCSLPGLGLSETDRATLVK-QVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFT 190 (303)
Q Consensus 112 ~v~~~~~Dl~d~~~~~~~~~~~~~~~-~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~ 190 (303)
.+++...|.. ...+.+..++. ++|.||.+.- |+..-..|++.|... +. . ++||.++
T Consensus 99 ~c~V~~~~~f-----~t~en~~~~~~~~~DyvIDaiD--------------~v~~Kv~Li~~c~~~-ki-~--vIss~Ga 155 (263)
T COG1179 99 ECEVTAINDF-----ITEENLEDLLSKGFDYVIDAID--------------SVRAKVALIAYCRRN-KI-P--VISSMGA 155 (263)
T ss_pred CceEeehHhh-----hCHhHHHHHhcCCCCEEEEchh--------------hhHHHHHHHHHHHHc-CC-C--EEeeccc
Confidence 4444443311 12225666665 6999997643 444556789999987 54 3 4466643
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.26 Score=48.43 Aligned_cols=73 Identities=12% Similarity=0.151 Sum_probs=52.6
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
..+|+|.| .|-+|+.+++.|.+.|++ +.+++.+++ +++.+.+ .+..++.||.+++
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~---vvvID~d~~------~v~~~~~---------------~g~~v~~GDat~~ 454 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLMANKMR---ITVLERDIS------AVNLMRK---------------YGYKVYYGDATQL 454 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHHhCCCC---EEEEECCHH------HHHHHHh---------------CCCeEEEeeCCCH
Confidence 35799998 699999999999999888 888887653 2222211 4678999999987
Q ss_pred CCCCCHHHHHHH-hccccEEEEcce
Q psy17679 124 GLGLSETDRATL-VKQVNIVFHGAA 147 (303)
Q Consensus 124 ~~~~~~~~~~~~-~~~~dvVi~~a~ 147 (303)
+ .+.++ .+++|.+|-+..
T Consensus 455 ~------~L~~agi~~A~~vv~~~~ 473 (601)
T PRK03659 455 E------LLRAAGAEKAEAIVITCN 473 (601)
T ss_pred H------HHHhcCCccCCEEEEEeC
Confidence 6 34433 347888875533
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.73 Score=34.89 Aligned_cols=32 Identities=19% Similarity=0.396 Sum_probs=24.8
Q ss_pred EEEEeCCcchhHHHHHHHHHhc-CCCccEEEEE-eCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLL-VRP 80 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~-~R~ 80 (303)
|+.|+|++|.+|..++..|.+. +.+ +..+ .|.
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~---l~av~~~~ 34 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFE---VVALAASA 34 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCce---EEEEEech
Confidence 4889999999999999999885 455 4444 443
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.095 Score=49.31 Aligned_cols=35 Identities=29% Similarity=0.276 Sum_probs=31.0
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
|+|.|.||+|.+|..++..|.+.|++ |++.+|++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~---V~v~~r~~~ 35 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFE---VIVTGRDPK 35 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCE---EEEEECChH
Confidence 57999999999999999999999886 888888743
|
|
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.25 Score=50.44 Aligned_cols=129 Identities=12% Similarity=0.067 Sum_probs=72.8
Q ss_pred CCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC---CcccH-----HHHHHHHHHhHHHhhhhcc
Q psy17679 34 IGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK---KGKDI-----QERLDAIFEDRLFWRLRAE 105 (303)
Q Consensus 34 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~---~~~~~-----~~~l~~l~~~~~~~~~~~~ 105 (303)
|+.+-+..++..+|+|.| .|++|+.+++.|...|-. .+++++-+. ++.+. ...+-..+...+..++.+-
T Consensus 322 ig~e~Q~kL~~srVlVvG-lGGlGs~ia~~LAraGVG--~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~I 398 (989)
T PRK14852 322 VDYAGQRRLLRSRVAIAG-LGGVGGIHLMTLARTGIG--NFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSV 398 (989)
T ss_pred cCHHHHHHHhcCcEEEEC-CcHHHHHHHHHHHHcCCC--eEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHH
Confidence 444455678889999998 789999999999999764 466655532 11110 0111111111222233333
Q ss_pred CcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEE
Q psy17679 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHV 185 (303)
Q Consensus 106 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~i 185 (303)
+|. .+++.+...+++. ....+++++|+||.+.-.... .....+.+.|.+. ++ .+|+.
T Consensus 399 NP~--v~I~~~~~~I~~e-------n~~~fl~~~DiVVDa~D~~~~------------~~rr~l~~~c~~~-~I-P~I~a 455 (989)
T PRK14852 399 NPF--LDIRSFPEGVAAE-------TIDAFLKDVDLLVDGIDFFAL------------DIRRRLFNRALEL-GI-PVITA 455 (989)
T ss_pred CCC--CeEEEEecCCCHH-------HHHHHhhCCCEEEECCCCccH------------HHHHHHHHHHHHc-CC-CEEEe
Confidence 332 4566665565442 577888999999976542111 1113455666665 44 56666
Q ss_pred eCC
Q psy17679 186 STA 188 (303)
Q Consensus 186 SS~ 188 (303)
++.
T Consensus 456 g~~ 458 (989)
T PRK14852 456 GPL 458 (989)
T ss_pred ecc
Confidence 654
|
|
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.14 Score=44.88 Aligned_cols=36 Identities=19% Similarity=0.228 Sum_probs=30.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++|+|+|.|.+..+|+.++..|+++|.. |+.+.+
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AT---Vt~chs 190 (282)
T PRK14180 155 KTEGAYAVVVGASNVVGKPVSQLLLNAKAT---VTTCHR 190 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCE---EEEEcC
Confidence 477899999999999999999999998766 666544
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.26 Score=47.90 Aligned_cols=70 Identities=20% Similarity=0.259 Sum_probs=50.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
-+++|.| .|-+|+++++.|.++|++ |.+++.+++ +.+.+.+ .+..++.||.++++
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~g~~---vvvId~d~~------~~~~~~~---------------~g~~~i~GD~~~~~ 472 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAAGIP---LVVIETSRT------RVDELRE---------------RGIRAVLGNAANEE 472 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHCCCC---EEEEECCHH------HHHHHHH---------------CCCeEEEcCCCCHH
Confidence 4789998 699999999999999988 888887643 2222211 47889999999876
Q ss_pred CCCCHHHHHHH-hccccEEEEc
Q psy17679 125 LGLSETDRATL-VKQVNIVFHG 145 (303)
Q Consensus 125 ~~~~~~~~~~~-~~~~dvVi~~ 145 (303)
.+.++ .+++|.++-+
T Consensus 473 ------~L~~a~i~~a~~viv~ 488 (558)
T PRK10669 473 ------IMQLAHLDCARWLLLT 488 (558)
T ss_pred ------HHHhcCccccCEEEEE
Confidence 34433 2477876643
|
|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.29 Score=43.73 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=32.0
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
..+.+|+|.|.| .|-||+.+++.|...|.+ |++.+|+
T Consensus 118 ~~L~gktvgIiG-~G~IG~~vA~~l~afG~~---V~~~~r~ 154 (303)
T PRK06436 118 KLLYNKSLGILG-YGGIGRRVALLAKAFGMN---IYAYTRS 154 (303)
T ss_pred CCCCCCEEEEEC-cCHHHHHHHHHHHHCCCE---EEEECCC
Confidence 357889999998 799999999988877887 8888885
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.12 E-value=1.2 Score=40.05 Aligned_cols=35 Identities=20% Similarity=0.175 Sum_probs=30.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
-++|.|.| +|-+|+.++..++..|++ |++.++++.
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a~aG~~---V~l~D~~~~ 41 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARALAHGLD---VVAWDPAPG 41 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCe---EEEEeCCHH
Confidence 46899998 699999999999999998 989998754
|
|
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.15 Score=44.65 Aligned_cols=36 Identities=19% Similarity=0.306 Sum_probs=30.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++|+|+|.|.+..+|..++..|+++|.. |+.+.+
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~At---Vt~chs 190 (278)
T PRK14172 155 DIEGKEVVVIGRSNIVGKPVAQLLLNENAT---VTICHS 190 (278)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCE---EEEeCC
Confidence 478899999999999999999999988765 655543
|
|
| >cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.24 Score=40.93 Aligned_cols=36 Identities=17% Similarity=0.220 Sum_probs=31.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++|+|+|.|.+.-+|+.++..|+++|.. |+++..
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~At---Vti~~~ 94 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLANDGAR---VYSVDI 94 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCE---EEEEec
Confidence 478999999999999999999999999877 777754
|
The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional |
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.16 Score=44.60 Aligned_cols=36 Identities=17% Similarity=0.162 Sum_probs=30.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+.+|+|+|.|.+..+|+.++..|+++|.. |+.+..
T Consensus 156 ~l~Gk~vvViGrS~iVGkPla~lL~~~~at---Vt~chs 191 (284)
T PRK14177 156 DVTGKNAVVVGRSPILGKPMAMLLTEMNAT---VTLCHS 191 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCE---EEEeCC
Confidence 578899999999999999999999998766 665543
|
|
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.15 Score=50.48 Aligned_cols=102 Identities=10% Similarity=0.077 Sum_probs=60.6
Q ss_pred CCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC---CcccH-----HHHHHHHHHhHHHhhhhcc
Q psy17679 34 IGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK---KGKDI-----QERLDAIFEDRLFWRLRAE 105 (303)
Q Consensus 34 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~---~~~~~-----~~~l~~l~~~~~~~~~~~~ 105 (303)
++.+.+..++..+|+|.| .|++|+.+++.|...|.. ++++++.+. ++.+. ...+-..+..-+..++.+-
T Consensus 33 ~g~e~Q~kL~~~~VlIvG-~GGlGs~va~~Lar~GVG--~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~i 109 (679)
T PRK14851 33 FTPGEQERLAEAKVAIPG-MGGVGGVHLITMVRTGIG--RFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSI 109 (679)
T ss_pred cCHHHHHHHhcCeEEEEC-cCHHHHHHHHHHHHhCCC--eEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHh
Confidence 344455677889999998 799999999999999864 465555432 11110 0111011111112223322
Q ss_pred CcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcce
Q psy17679 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAA 147 (303)
Q Consensus 106 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~ 147 (303)
+| ..+++.+...+++. .+..+++++|+||.+.-
T Consensus 110 nP--~~~I~~~~~~i~~~-------n~~~~l~~~DvVid~~D 142 (679)
T PRK14851 110 NP--FLEITPFPAGINAD-------NMDAFLDGVDVVLDGLD 142 (679)
T ss_pred CC--CCeEEEEecCCChH-------HHHHHHhCCCEEEECCC
Confidence 33 24666777776543 46788899999997653
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.25 Score=43.62 Aligned_cols=37 Identities=14% Similarity=0.164 Sum_probs=30.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.++++++|.|+ |+.|++++..|.+.|.. +|+++.|+.
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~--~i~i~nR~~ 161 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQ--KLQVADLDT 161 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCC--EEEEEcCCH
Confidence 34588999994 99999999999998764 589999974
|
|
| >PRK06487 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.23 Score=44.63 Aligned_cols=36 Identities=22% Similarity=0.155 Sum_probs=31.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
.+.+|+|.|.| .|-||+.+++.|...|.+ |++..|.
T Consensus 145 ~l~gktvgIiG-~G~IG~~vA~~l~~fgm~---V~~~~~~ 180 (317)
T PRK06487 145 ELEGKTLGLLG-HGELGGAVARLAEAFGMR---VLIGQLP 180 (317)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhhCCCE---EEEECCC
Confidence 47889999998 799999999999888877 8787775
|
|
| >PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.18 Score=44.65 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=30.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEe
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLV 78 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~ 78 (303)
.+++|+|+|.|.+..+|+.++..|+++|.. |+++.
T Consensus 155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~at---Vtv~h 189 (297)
T PRK14186 155 DIAGKKAVVVGRSILVGKPLALMLLAANAT---VTIAH 189 (297)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCE---EEEeC
Confidence 477899999999999999999999998776 65553
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.39 Score=43.78 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=32.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+.+|+|.|.| .|-||+.+++.|...|.+ |++.+|+.
T Consensus 156 ~l~gktvGIiG-~G~IG~~vA~~l~afG~~---V~~~dr~~ 192 (347)
T PLN02928 156 TLFGKTVFILG-YGAIGIELAKRLRPFGVK---LLATRRSW 192 (347)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHhhCCCE---EEEECCCC
Confidence 47789999998 799999999999999887 88888863
|
|
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.2 Score=44.02 Aligned_cols=34 Identities=15% Similarity=0.334 Sum_probs=29.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEE
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLL 77 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~ 77 (303)
.+++|+|+|.|.+..+|..++..|+++|.. |+++
T Consensus 154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAt---Vtv~ 187 (285)
T PRK14191 154 EIKGKDVVIIGASNIVGKPLAMLMLNAGAS---VSVC 187 (285)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCE---EEEE
Confidence 477899999999999999999999999876 6554
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.19 Score=47.03 Aligned_cols=37 Identities=32% Similarity=0.462 Sum_probs=30.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+++|+|.|+ |.+|..++..|...|. ..|++..|+.
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~--~~V~v~~rs~ 214 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGV--GKILIANRTY 214 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence 56789999995 9999999999998873 2488999874
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.12 Score=47.26 Aligned_cols=36 Identities=14% Similarity=0.282 Sum_probs=26.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRP 80 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~ 80 (303)
++|.|.||||++|..+++.|+++ ...+..+..++..
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~ 38 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS 38 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecch
Confidence 68999999999999999966665 3444446665554
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.28 Score=43.39 Aligned_cols=45 Identities=16% Similarity=0.259 Sum_probs=34.7
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCccc-HHHHHHHH
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKD-IQERLDAI 93 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~-~~~~l~~l 93 (303)
++|.|.| .|.+|..++..|+..|++ |++.++++.... ..+++.+.
T Consensus 6 ~~V~ViG-aG~mG~~iA~~~a~~G~~---V~l~d~~~~~~~~~~~~i~~~ 51 (286)
T PRK07819 6 QRVGVVG-AGQMGAGIAEVCARAGVD---VLVFETTEELATAGRNRIEKS 51 (286)
T ss_pred cEEEEEc-ccHHHHHHHHHHHhCCCE---EEEEECCHHHHHHHHHHHHHH
Confidence 4799998 499999999999999998 999999865432 33444433
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.27 Score=43.35 Aligned_cols=38 Identities=18% Similarity=0.311 Sum_probs=32.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.++++++|.| +|+.+++++..|++.|.. +|+++.|+.+
T Consensus 124 ~~~~~vlilG-AGGAarAv~~aL~~~g~~--~i~V~NRt~~ 161 (283)
T COG0169 124 VTGKRVLILG-AGGAARAVAFALAEAGAK--RITVVNRTRE 161 (283)
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHHcCCC--EEEEEeCCHH
Confidence 3568999999 589999999999999853 5999999754
|
|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.2 Score=44.38 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=30.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEE
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLL 77 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~ 77 (303)
.+++|+|+|.|.+|.+|..++..|++.|+. |+++
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~t---Vtv~ 188 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANAT---VTIA 188 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCE---EEEE
Confidence 478899999999999999999999999987 7766
|
|
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.39 Score=44.06 Aligned_cols=39 Identities=15% Similarity=0.217 Sum_probs=31.7
Q ss_pred ccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 39 QEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 39 ~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
++.++..+|+|.| +|++|++++..|.+.|- .++++++..
T Consensus 171 q~kL~~~~VaIVG-~GG~GS~Va~~LAR~GV--geI~LVD~D 209 (393)
T PRK06153 171 SAKLEGQRIAIIG-LGGTGSYILDLVAKTPV--REIHLFDGD 209 (393)
T ss_pred HHHHhhCcEEEEc-CCccHHHHHHHHHHcCC--CEEEEECCC
Confidence 4567788999998 79999999999999974 357776654
|
|
| >PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.2 Score=43.99 Aligned_cols=35 Identities=9% Similarity=0.227 Sum_probs=30.1
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEe
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLV 78 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~ 78 (303)
.+++|+|+|.|.+..+|+.++..|+++|.. |+++.
T Consensus 153 ~l~Gk~vvViGrS~iVGkPla~lL~~~~at---Vtich 187 (282)
T PRK14169 153 DVAGKRVVIVGRSNIVGRPLAGLMVNHDAT---VTIAH 187 (282)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCE---EEEEC
Confidence 468899999999999999999999988766 65553
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.63 Score=41.13 Aligned_cols=35 Identities=11% Similarity=0.163 Sum_probs=30.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.++|.|.| +|.+|..++..|...|++ |++.++++.
T Consensus 3 ~~kIaViG-aG~mG~~iA~~la~~G~~---V~l~d~~~~ 37 (287)
T PRK08293 3 IKNVTVAG-AGVLGSQIAFQTAFHGFD---VTIYDISDE 37 (287)
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhcCCe---EEEEeCCHH
Confidence 36899998 599999999999999987 999998754
|
|
| >PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.66 E-value=0.21 Score=43.93 Aligned_cols=36 Identities=14% Similarity=0.246 Sum_probs=30.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++|+|+|.|.+..+|+.++..|+++|.. |+.+.+
T Consensus 154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~at---Vt~chs 189 (282)
T PRK14166 154 DLEGKDAVIIGASNIVGRPMATMLLNAGAT---VSVCHI 189 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCE---EEEeCC
Confidence 478899999999999999999999988766 665443
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.15 Score=45.52 Aligned_cols=36 Identities=17% Similarity=0.294 Sum_probs=31.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+.+++|+||+|.+|..+++.+...|.. |++++|++
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~---v~~~~~~~ 197 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGAR---VIAVTRSP 197 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCe---EEEEeCCH
Confidence 3578999999999999999999999887 88888764
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=93.63 E-value=0.28 Score=43.98 Aligned_cols=38 Identities=21% Similarity=0.339 Sum_probs=30.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..+++|+|.|+ |.+|..+++.|...|.. .|+++.|+..
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~--~V~v~~r~~~ 213 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVA--EITIANRTYE 213 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCC--EEEEEeCCHH
Confidence 46789999985 99999999999886532 4888888743
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.63 E-value=0.21 Score=44.18 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=30.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++|+|+|.|.+..+|+.++..|+++|.. |+++..
T Consensus 157 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aT---Vt~chs 192 (294)
T PRK14187 157 NLSGSDAVVIGRSNIVGKPMACLLLGENCT---VTTVHS 192 (294)
T ss_pred CCCCCEEEEECCCccchHHHHHHHhhCCCE---EEEeCC
Confidence 477899999999999999999999998766 665543
|
|
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.23 Score=43.64 Aligned_cols=35 Identities=20% Similarity=0.256 Sum_probs=30.1
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEe
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLV 78 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~ 78 (303)
.+++|+|+|.|.+..+|+.++..|+++|.. |+++.
T Consensus 155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~at---Vt~ch 189 (284)
T PRK14190 155 DISGKHVVVVGRSNIVGKPVGQLLLNENAT---VTYCH 189 (284)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCE---EEEEe
Confidence 468899999999999999999999998766 66553
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.22 Score=45.19 Aligned_cols=38 Identities=21% Similarity=0.392 Sum_probs=29.6
Q ss_pred CcEEEEeCCcchhHHHHHHHHHh-cCCCccEEEEEeCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLR-SCPHLKHIYLLVRPK 81 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~-~g~~v~~V~~~~R~~ 81 (303)
.++|.|.||||++|..+++.|.+ ...++..+..++...
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~ 43 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKR 43 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcc
Confidence 36899999999999999999985 555665566666543
|
|
| >PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.22 Score=43.76 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=30.1
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEe
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLV 78 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~ 78 (303)
.+.+|+|+|.|.+..+|+.++..|+++|.. |+++.
T Consensus 154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~at---Vtich 188 (284)
T PRK14170 154 QIEGKRAVVIGRSNIVGKPVAQLLLNENAT---VTIAH 188 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCE---EEEeC
Confidence 478899999999999999999999988766 65543
|
|
| >PRK06932 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.28 Score=44.06 Aligned_cols=36 Identities=17% Similarity=0.095 Sum_probs=30.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
.+.+|+|.|.| .|-||+.+++.|...|.+ |++..|.
T Consensus 144 ~l~gktvgIiG-~G~IG~~va~~l~~fg~~---V~~~~~~ 179 (314)
T PRK06932 144 DVRGSTLGVFG-KGCLGTEVGRLAQALGMK---VLYAEHK 179 (314)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhcCCCE---EEEECCC
Confidence 47889999998 799999999999888876 7777664
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.5 Score=45.39 Aligned_cols=38 Identities=21% Similarity=0.394 Sum_probs=31.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
+.+++|+|.|+ |.+|..+++.|...|.. .|+++.|+..
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~--~V~V~nRs~e 301 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCT--KMVVVNRSEE 301 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCC--eEEEEeCCHH
Confidence 45689999996 99999999999988753 4889999743
|
|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.28 Score=45.14 Aligned_cols=68 Identities=16% Similarity=0.188 Sum_probs=48.2
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+++|+|.|+ |.+|+-++..+.+.|++ |++++.++.... ..+ . -.++.+|+.|.
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~---v~~~d~~~~~pa--~~~--------------------a-d~~~~~~~~D~ 54 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYK---VIVLDPDPDSPA--AQV--------------------A-DEVIVADYDDV 54 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCE---EEEEeCCCCCch--hHh--------------------C-ceEEecCCCCH
Confidence 468999996 89999999999999998 888887653211 110 1 12456777776
Q ss_pred CCCCCHHHHHHHhccccEEEE
Q psy17679 124 GLGLSETDRATLVKQVNIVFH 144 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~ 144 (303)
+ .+..+.+.+|+|..
T Consensus 55 ~------~l~~~a~~~dvit~ 69 (372)
T PRK06019 55 A------ALRELAEQCDVITY 69 (372)
T ss_pred H------HHHHHHhcCCEEEe
Confidence 5 67777778887653
|
|
| >COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.44 Score=42.92 Aligned_cols=38 Identities=24% Similarity=0.283 Sum_probs=32.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.+.+|++.|.| .|-||+.+++.+...|.+ |...+|++.
T Consensus 143 ~l~gktvGIiG-~GrIG~avA~r~~~Fgm~---v~y~~~~~~ 180 (324)
T COG1052 143 DLRGKTLGIIG-LGRIGQAVARRLKGFGMK---VLYYDRSPN 180 (324)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHhcCCCE---EEEECCCCC
Confidence 57789999998 899999999999977776 888888764
|
|
| >PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.23 Score=43.54 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=29.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEE
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLL 77 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~ 77 (303)
.+++|+|+|.|.+..+|..++..|+++|.. |+++
T Consensus 154 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~At---Vti~ 187 (281)
T PRK14183 154 DVKGKDVCVVGASNIVGKPMAALLLNANAT---VDIC 187 (281)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCE---EEEe
Confidence 478899999999999999999999988766 6544
|
|
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.22 Score=43.80 Aligned_cols=34 Identities=21% Similarity=0.307 Sum_probs=30.4
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEE
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLL 77 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~ 77 (303)
..++|+|.|.|.+|.+|..++..|++.|+. |+++
T Consensus 155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gat---Vtv~ 188 (284)
T PRK14179 155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNAT---VTLT 188 (284)
T ss_pred CCCCCEEEEECCCCcCcHHHHHHHHHCCCE---EEEE
Confidence 478899999999999999999999999887 6655
|
|
| >PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.26 Score=43.44 Aligned_cols=35 Identities=17% Similarity=0.296 Sum_probs=30.0
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEe
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLV 78 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~ 78 (303)
.+++|+|+|.|.+..+|+.++..|+++|.. |+++.
T Consensus 156 ~l~GK~vvViGrS~iVGkPla~lL~~~~AT---Vtich 190 (288)
T PRK14171 156 NLTGKNVVIIGRSNIVGKPLSALLLKENCS---VTICH 190 (288)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCE---EEEeC
Confidence 478899999999999999999999998766 65543
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.26 Score=46.20 Aligned_cols=37 Identities=24% Similarity=0.355 Sum_probs=31.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+++|+|.|+ |.+|..++..|...|.. .|++..|+.
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~--~V~v~~r~~ 216 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVR--KITVANRTL 216 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCC--eEEEEeCCH
Confidence 56789999985 99999999999988753 488888874
|
|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.17 Score=46.07 Aligned_cols=37 Identities=14% Similarity=0.231 Sum_probs=29.5
Q ss_pred cEEEEeCCcchhHHHHHHHHH-hcCCCccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLL-RSCPHLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll-~~g~~v~~V~~~~R~~ 81 (303)
|+|.|.||||.+|+.+++.|. ++.+.+..++.++...
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~ 38 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQ 38 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchh
Confidence 479999999999999999999 5566656677766543
|
|
| >TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein | Back alignment and domain information |
|---|
Probab=93.04 E-value=1.5 Score=42.50 Aligned_cols=86 Identities=14% Similarity=0.108 Sum_probs=54.6
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
...||+|.| .|.+|++++..|++.|..- +++++-+.- .....++.++.+.. . +..+.+.+-..+.++
T Consensus 128 R~akVlVlG-~Gg~~s~lv~sL~~sG~~~--I~~vd~D~v-~SNlnRIgEl~e~A-~--------~~n~~v~v~~i~~~~ 194 (637)
T TIGR03693 128 RNAKILAAG-SGDFLTKLVRSLIDSGFPR--FHAIVTDAE-EHALDRIHELAEIA-E--------ETDDALLVQEIDFAE 194 (637)
T ss_pred hcccEEEEe-cCchHHHHHHHHHhcCCCc--EEEEecccc-chhhhHHHHHHHHH-H--------HhCCCCceEeccCCc
Confidence 457899998 7999999999999998753 555533322 12233333331110 0 012455555555544
Q ss_pred CCCCCCHHHHHHHhccccEEEEcce
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAA 147 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~ 147 (303)
.. ++..+++..|+|++.+-
T Consensus 195 ~~------dl~ev~~~~DiVi~vsD 213 (637)
T TIGR03693 195 DQ------HLHEAFEPADWVLYVSD 213 (637)
T ss_pred ch------hHHHhhcCCcEEEEECC
Confidence 44 78999999999998866
|
Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein. |
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.86 Score=41.78 Aligned_cols=34 Identities=18% Similarity=0.183 Sum_probs=30.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
|||-|.| +||+|......|.+.||+ |+|++..++
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GHe---Vv~vDid~~ 34 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGHE---VVCVDIDES 34 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCCe---EEEEeCCHH
Confidence 6799998 899999999999999998 999998754
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=92.92 E-value=1.5 Score=38.64 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=30.0
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
++|.|.|+ |.+|..++..|.+.|++ |++.++++.
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~---V~~~d~~~~ 35 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQ---TTLVDIKQE 35 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCc---EEEEeCCHH
Confidence 57999985 99999999999999998 888998754
|
|
| >PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=92.86 E-value=0.33 Score=42.60 Aligned_cols=35 Identities=17% Similarity=0.261 Sum_probs=29.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEe
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLV 78 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~ 78 (303)
..++|+|+|.|.+..+|+.++..|+++|.. |+++.
T Consensus 154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~At---Vtich 188 (282)
T PRK14182 154 DPKGKRALVVGRSNIVGKPMAMMLLERHAT---VTIAH 188 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCE---EEEeC
Confidence 467899999999999999999999988765 65543
|
|
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=92.86 E-value=0.96 Score=31.39 Aligned_cols=33 Identities=24% Similarity=0.492 Sum_probs=28.7
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
+|+|.| .|++|-.++..|.+.|.+ |+++.|++.
T Consensus 1 ~vvViG-gG~ig~E~A~~l~~~g~~---vtli~~~~~ 33 (80)
T PF00070_consen 1 RVVVIG-GGFIGIELAEALAELGKE---VTLIERSDR 33 (80)
T ss_dssp EEEEES-SSHHHHHHHHHHHHTTSE---EEEEESSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHhCcE---EEEEeccch
Confidence 578888 599999999999999876 889999864
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=92.73 E-value=0.14 Score=48.79 Aligned_cols=36 Identities=19% Similarity=0.402 Sum_probs=30.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
+.+++++|+|+ |.+|++++..|.+.|++ |++..|+.
T Consensus 330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~---V~i~~R~~ 365 (477)
T PRK09310 330 LNNQHVAIVGA-GGAAKAIATTLARAGAE---LLIFNRTK 365 (477)
T ss_pred cCCCEEEEEcC-cHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 45689999995 89999999999999886 77778763
|
|
| >PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=92.73 E-value=0.34 Score=42.66 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=28.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHh--cCCCccEEEEEe
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLR--SCPHLKHIYLLV 78 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~--~g~~v~~V~~~~ 78 (303)
.+++|+|+|.|.++.+|+.++..|++ ++.. |+++.
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~~~at---Vtvch 191 (284)
T PRK14193 155 ELAGAHVVVIGRGVTVGRPIGLLLTRRSENAT---VTLCH 191 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHhhccCCCE---EEEeC
Confidence 46789999999999999999999998 4454 55543
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=92.72 E-value=1.2 Score=38.61 Aligned_cols=70 Identities=17% Similarity=0.232 Sum_probs=48.8
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+++|+|.|||+ =|+.+++.|.+.|+. |+..+..+.... . ...+.++.|-+.+.
T Consensus 2 ~~~IlvlgGT~-egr~la~~L~~~g~~---v~~Svat~~g~~----------------------~-~~~~~v~~G~l~~~ 54 (248)
T PRK08057 2 MPRILLLGGTS-EARALARALAAAGVD---IVLSLAGRTGGP----------------------A-DLPGPVRVGGFGGA 54 (248)
T ss_pred CceEEEEechH-HHHHHHHHHHhCCCe---EEEEEccCCCCc----------------------c-cCCceEEECCCCCH
Confidence 46799999984 699999999999886 555444433210 0 14666777877554
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcc
Q psy17679 124 GLGLSETDRATLVK--QVNIVFHGA 146 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--~~dvVi~~a 146 (303)
+ .+..++. +++.||+..
T Consensus 55 ~------~l~~~l~~~~i~~VIDAT 73 (248)
T PRK08057 55 E------GLAAYLREEGIDLVIDAT 73 (248)
T ss_pred H------HHHHHHHHCCCCEEEECC
Confidence 4 6777776 899999764
|
|
| >KOG0023|consensus | Back alignment and domain information |
|---|
Probab=92.65 E-value=0.72 Score=41.04 Aligned_cols=101 Identities=13% Similarity=0.128 Sum_probs=62.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc-cHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK-DIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~-~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
..++++.|+|+.| +|+-=++--.+.|.+ |+++++++++. .+.+. -+.+.+..-.
T Consensus 180 ~pG~~vgI~GlGG-LGh~aVq~AKAMG~r---V~vis~~~~kkeea~~~---------------------LGAd~fv~~~ 234 (360)
T KOG0023|consen 180 GPGKWVGIVGLGG-LGHMAVQYAKAMGMR---VTVISTSSKKKEEAIKS---------------------LGADVFVDST 234 (360)
T ss_pred CCCcEEEEecCcc-cchHHHHHHHHhCcE---EEEEeCCchhHHHHHHh---------------------cCcceeEEec
Confidence 3578999999887 998777777777887 99999986422 22221 2344444433
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
.|++ ....+.+..|.++|++... ...+. ..++.+++.. .++|+++-.
T Consensus 235 ~d~d------~~~~~~~~~dg~~~~v~~~-a~~~~-----------~~~~~~lk~~---Gt~V~vg~p 281 (360)
T KOG0023|consen 235 EDPD------IMKAIMKTTDGGIDTVSNL-AEHAL-----------EPLLGLLKVN---GTLVLVGLP 281 (360)
T ss_pred CCHH------HHHHHHHhhcCcceeeeec-cccch-----------HHHHHHhhcC---CEEEEEeCc
Confidence 3555 5666666677777776633 11111 2345566655 478887765
|
|
| >COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.65 E-value=0.82 Score=39.00 Aligned_cols=117 Identities=20% Similarity=0.175 Sum_probs=68.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHH-----hhhhccCcCcCCceEEEEe-
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLF-----WRLRAEVPDFRSKVSAVAG- 118 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~-----~~~~~~~~~~~~~v~~~~~- 118 (303)
|++.+.| -|-.|..++++|++.||+ |++.++++. .++++...++. ..+.... ..+++.++-.
T Consensus 1 M~iGmiG-LGrMG~n~v~rl~~~ghd---vV~yD~n~~------av~~~~~~ga~~a~sl~el~~~L--~~pr~vWlMvP 68 (300)
T COG1023 1 MQIGMIG-LGRMGANLVRRLLDGGHD---VVGYDVNQT------AVEELKDEGATGAASLDELVAKL--SAPRIVWLMVP 68 (300)
T ss_pred Ccceeec-cchhhHHHHHHHHhCCCe---EEEEcCCHH------HHHHHHhcCCccccCHHHHHHhc--CCCcEEEEEcc
Confidence 3466666 799999999999999999 889999753 22222222111 1111111 1267777654
Q ss_pred --cCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC
Q psy17679 119 --DCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC 192 (303)
Q Consensus 119 --Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~ 192 (303)
|+++.- ..++...++.=|+||.-... |+..+.+-.+.+.+. ++ +|+=++|+.+..
T Consensus 69 ag~it~~v----i~~la~~L~~GDivIDGGNS-------------~y~Ds~rr~~~l~~k-gi-~flD~GTSGG~~ 125 (300)
T COG1023 69 AGDITDAV----IDDLAPLLSAGDIVIDGGNS-------------NYKDSLRRAKLLAEK-GI-HFLDVGTSGGVW 125 (300)
T ss_pred CCCchHHH----HHHHHhhcCCCCEEEECCcc-------------chHHHHHHHHHHHhc-CC-eEEeccCCCCch
Confidence 444432 23455556677899865432 233333444555554 44 889999996643
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.63 E-value=0.24 Score=45.74 Aligned_cols=37 Identities=19% Similarity=0.189 Sum_probs=32.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+.+|+|.|.| .|-||+.+++.|...|.+ |+..+|..
T Consensus 189 ~L~gktVGIvG-~G~IG~~vA~~l~~fG~~---V~~~dr~~ 225 (385)
T PRK07574 189 DLEGMTVGIVG-AGRIGLAVLRRLKPFDVK---LHYTDRHR 225 (385)
T ss_pred ecCCCEEEEEC-CCHHHHHHHHHHHhCCCE---EEEECCCC
Confidence 47789999998 799999999999998887 88888864
|
|
| >PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=92.63 E-value=0.35 Score=43.82 Aligned_cols=36 Identities=14% Similarity=0.188 Sum_probs=30.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++|+|+|.|.+..+|+.++..|+++|.. |+++..
T Consensus 228 ~l~GK~vvVIGRS~iVGkPLa~LL~~~~AT---VTicHs 263 (364)
T PLN02616 228 EIKGKRAVVIGRSNIVGMPAALLLQREDAT---VSIVHS 263 (364)
T ss_pred CCCCCEEEEECCCccccHHHHHHHHHCCCe---EEEeCC
Confidence 478899999999999999999999998776 666543
|
|
| >cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3 | Back alignment and domain information |
|---|
Probab=92.59 E-value=0.76 Score=40.71 Aligned_cols=89 Identities=17% Similarity=0.201 Sum_probs=52.7
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC---Cccc-----HHHHHHHHHHhHHHhhhhccCcCcCCceEEEE
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK---KGKD-----IQERLDAIFEDRLFWRLRAEVPDFRSKVSAVA 117 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~---~~~~-----~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~ 117 (303)
+|||.| .|.+|..+++.|...|.. ++++++.+. ++.. ..+.+-+.+..-+..++.+..|. -+++.+.
T Consensus 1 kVlVVG-aGGlG~eilknLal~Gvg--~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~--v~I~~~~ 75 (291)
T cd01488 1 KILVIG-AGGLGCELLKNLALSGFR--NIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPG--VNVTPHF 75 (291)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCC--eEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCC--CEEEEEe
Confidence 589998 689999999999999764 577766542 1111 01112112222222333333332 4666777
Q ss_pred ecCCCCCCCCCHHHHHHHhccccEEEEcce
Q psy17679 118 GDCSLPGLGLSETDRATLVKQVNIVFHGAA 147 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~ 147 (303)
.++.+. -...+++.|+||.+.-
T Consensus 76 ~~i~~~--------~~~f~~~fdvVi~alD 97 (291)
T cd01488 76 GKIQDK--------DEEFYRQFNIIICGLD 97 (291)
T ss_pred cccCch--------hHHHhcCCCEEEECCC
Confidence 777653 2466789999997644
|
UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=92.56 E-value=1.3 Score=39.42 Aligned_cols=36 Identities=8% Similarity=0.120 Sum_probs=31.2
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+.+++|+|+++.+|..++..+...|.. |++.+++.
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~---v~~~~~~~ 201 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGAT---VIATAGSE 201 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCE---EEEEeCCH
Confidence 4579999999999999999999999887 77777764
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=92.55 E-value=0.78 Score=40.10 Aligned_cols=36 Identities=14% Similarity=0.142 Sum_probs=26.3
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
++|.|.| +|.+|..+++.|.+.+..+..+.+++|++
T Consensus 2 mrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~ 37 (265)
T PRK13304 2 LKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNL 37 (265)
T ss_pred CEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCH
Confidence 6899999 69999999999987632333355566653
|
|
| >PLN02306 hydroxypyruvate reductase | Back alignment and domain information |
|---|
Probab=92.48 E-value=0.57 Score=43.33 Aligned_cols=37 Identities=11% Similarity=0.168 Sum_probs=31.0
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHH-hcCCCccEEEEEeCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLL-RSCPHLKHIYLLVRPK 81 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll-~~g~~v~~V~~~~R~~ 81 (303)
.+.+++|.|.| .|.||+.+++.|. ..|.+ |.+.++..
T Consensus 162 ~L~gktvGIiG-~G~IG~~vA~~l~~~fGm~---V~~~d~~~ 199 (386)
T PLN02306 162 LLKGQTVGVIG-AGRIGSAYARMMVEGFKMN---LIYYDLYQ 199 (386)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhcCCCE---EEEECCCC
Confidence 47889999998 8999999999985 66766 88888764
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.49 Score=41.67 Aligned_cols=36 Identities=17% Similarity=0.336 Sum_probs=31.3
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+++|+|+|++|.+|..+++.+...|.. |++++++.
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~---v~~~~~~~ 179 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGAR---VIATASSA 179 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCE---EEEEeCCH
Confidence 4689999999999999999999888876 88888764
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=92.34 E-value=0.37 Score=42.08 Aligned_cols=37 Identities=19% Similarity=0.290 Sum_probs=31.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
.+.++++.|.|.+..+|+.++..|+..++. |+++.+.
T Consensus 153 ~l~Gk~~vVVGrS~iVGkPla~lL~~~naT---VtvcHs~ 189 (283)
T COG0190 153 DLRGKNVVVVGRSNIVGKPLALLLLNANAT---VTVCHSR 189 (283)
T ss_pred CCCCCEEEEECCCCcCcHHHHHHHHhCCCE---EEEEcCC
Confidence 468899999999999999999999998887 6665543
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=92.29 E-value=0.84 Score=45.03 Aligned_cols=72 Identities=14% Similarity=0.225 Sum_probs=51.8
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
..+|+|.| .|-+|+.+++.|.++|.+ +++++.+++ +.+.+.. .+..++.||.+++
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~---vvvID~d~~------~v~~~~~---------------~g~~v~~GDat~~ 454 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLLSSGVK---MTVLDHDPD------HIETLRK---------------FGMKVFYGDATRM 454 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHHhCCCC---EEEEECCHH------HHHHHHh---------------cCCeEEEEeCCCH
Confidence 36899998 689999999999999887 888888754 2322211 4678999999997
Q ss_pred CCCCCHHHHHHH-hccccEEEEcc
Q psy17679 124 GLGLSETDRATL-VKQVNIVFHGA 146 (303)
Q Consensus 124 ~~~~~~~~~~~~-~~~~dvVi~~a 146 (303)
+ -+..+ .++.+.||-+.
T Consensus 455 ~------~L~~agi~~A~~vvv~~ 472 (621)
T PRK03562 455 D------LLESAGAAKAEVLINAI 472 (621)
T ss_pred H------HHHhcCCCcCCEEEEEe
Confidence 6 23322 24788777553
|
|
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=92.28 E-value=0.58 Score=44.75 Aligned_cols=36 Identities=17% Similarity=0.296 Sum_probs=30.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
...+++|+|.| .|..|...++.|...|++ |++.++.
T Consensus 9 ~~~~~~v~V~G-~G~sG~aa~~~L~~~G~~---v~~~D~~ 44 (488)
T PRK03369 9 LLPGAPVLVAG-AGVTGRAVLAALTRFGAR---PTVCDDD 44 (488)
T ss_pred ccCCCeEEEEc-CCHHHHHHHHHHHHCCCE---EEEEcCC
Confidence 34678999998 789999999999999987 7777754
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=92.28 E-value=0.86 Score=36.46 Aligned_cols=34 Identities=15% Similarity=0.277 Sum_probs=29.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEe
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLV 78 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~ 78 (303)
.+++++|+|.|| |-+|...++.|++.|++ |++++
T Consensus 10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~---V~VIs 43 (157)
T PRK06719 10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAF---VTVVS 43 (157)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCE---EEEEc
Confidence 478899999994 89999999999999998 66663
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=92.25 E-value=0.9 Score=42.16 Aligned_cols=76 Identities=18% Similarity=0.316 Sum_probs=52.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++|||.| .|-+|.-+++.|.+.|. ..|+++.|... +.+++.. ++. ++..
T Consensus 176 L~~~~vlvIG-AGem~~lva~~L~~~g~--~~i~IaNRT~e------rA~~La~----------------~~~---~~~~ 227 (414)
T COG0373 176 LKDKKVLVIG-AGEMGELVAKHLAEKGV--KKITIANRTLE------RAEELAK----------------KLG---AEAV 227 (414)
T ss_pred cccCeEEEEc-ccHHHHHHHHHHHhCCC--CEEEEEcCCHH------HHHHHHH----------------HhC---Ceee
Confidence 6778999999 58999999999999975 35999999743 2222221 111 2222
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF 151 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~ 151 (303)
..+ ++...+...|+||.+.+...+
T Consensus 228 ~l~------el~~~l~~~DvVissTsa~~~ 251 (414)
T COG0373 228 ALE------ELLEALAEADVVISSTSAPHP 251 (414)
T ss_pred cHH------HHHHhhhhCCEEEEecCCCcc
Confidence 222 677888899999998776443
|
|
| >PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=92.25 E-value=0.4 Score=43.22 Aligned_cols=36 Identities=14% Similarity=0.116 Sum_probs=30.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++|+|+|.|-+..+|..++..|+++|.. |+++.+
T Consensus 211 ~l~GK~vvVIGRS~iVGkPla~LL~~~~AT---VTicHs 246 (345)
T PLN02897 211 EIAGKNAVVIGRSNIVGLPMSLLLQRHDAT---VSTVHA 246 (345)
T ss_pred CCCCCEEEEECCCccccHHHHHHHHHCCCE---EEEEcC
Confidence 478899999999999999999999988766 655543
|
|
| >PRK07634 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=92.23 E-value=0.5 Score=40.52 Aligned_cols=38 Identities=21% Similarity=0.442 Sum_probs=29.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCC-CccEEEEEeCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCP-HLKHIYLLVRP 80 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~-~v~~V~~~~R~ 80 (303)
|+++||.|.| +|.+|..++..|++.|. .+..|++..|+
T Consensus 2 m~~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~ 40 (245)
T PRK07634 2 LKKHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRS 40 (245)
T ss_pred CCCCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCC
Confidence 3467899998 69999999999998863 34447677764
|
|
| >PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+) | Back alignment and domain information |
|---|
Probab=92.23 E-value=0.45 Score=42.16 Aligned_cols=35 Identities=17% Similarity=0.252 Sum_probs=30.4
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEe
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLV 78 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~ 78 (303)
.+++|+|+|.|.+..+|+.++..|+++|.. |+.+.
T Consensus 164 ~l~Gk~vvVIGRS~iVGkPla~lL~~~~AT---Vtvch 198 (299)
T PLN02516 164 PIKGKKAVVVGRSNIVGLPVSLLLLKADAT---VTVVH 198 (299)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCE---EEEeC
Confidence 577899999999999999999999998776 66654
|
|
| >PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional | Back alignment and domain information |
|---|
Probab=92.22 E-value=0.79 Score=41.34 Aligned_cols=37 Identities=19% Similarity=0.171 Sum_probs=30.0
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHH-hcCCCccEEEEEeCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLL-RSCPHLKHIYLLVRPK 81 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll-~~g~~v~~V~~~~R~~ 81 (303)
.+.+|++.|.| .|-||+.+++.|. ..|.+ |...+|..
T Consensus 142 ~L~gktvGIiG-~G~IG~~va~~l~~~fgm~---V~~~~~~~ 179 (323)
T PRK15409 142 DVHHKTLGIVG-MGRIGMALAQRAHFGFNMP---ILYNARRH 179 (323)
T ss_pred CCCCCEEEEEc-ccHHHHHHHHHHHhcCCCE---EEEECCCC
Confidence 57889999998 7999999999987 56665 76766653
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 303 | ||||
| 4dqv_A | 478 | Crystal Structure Of Reductase (R) Domain Of Non-Ri | 4e-11 |
| >pdb|4DQV|A Chain A, Crystal Structure Of Reductase (R) Domain Of Non-Ribosomal Peptide Synthetase From Mycobacterium Tuberculosis Length = 478 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 183 bits (467), Expect = 1e-54
Identities = 66/303 (21%), Positives = 113/303 (37%), Gaps = 34/303 (11%)
Query: 26 PDDIPDDEIGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKD 85
D + P +T+ LTG TGF+G+ +V +LLR + LVR + +D
Sbjct: 56 DADTLATAVNLP-GPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDED 114
Query: 86 IQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHG 145
+ RL+ F+ LR ++ VAGD S P LGL + L + V+++
Sbjct: 115 ARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDS 174
Query: 146 AATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPR--ERIDEEFYP 203
AA V + ++ NV G ++++A K LK F +VSTA E+
Sbjct: 175 AAMVNAFPYHEL-FGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAIEPSAFTEDADI 232
Query: 204 VPLKYENLIQLISETG-------DEEL----SEMTPNRVHI----------SGTGWIDNV 242
+ + G E L +++ V + S G ++
Sbjct: 233 RVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMS 292
Query: 243 YGPIGMLVG-IATGVL-------HTHLINLNTVTDMVPVDLVVNSMISIAWSIGESGKVE 294
M++ +ATG+ + D +PV V ++ + + S
Sbjct: 293 DWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAG 352
Query: 295 KAI 297
A
Sbjct: 353 FAT 355
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 1e-12
Identities = 22/186 (11%), Positives = 45/186 (24%), Gaps = 49/186 (26%)
Query: 27 DDIPDDEIGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKH-IYLLVRPKKGKD 85
D+ P G + + G TG +G + + H + L+ RP
Sbjct: 3 DEQPLSRPGAHV-------KYAVLGATGLLGHHAARAIRAA----GHDLVLIHRPSSQIQ 51
Query: 86 IQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATL---VKQVNIV 142
L+ + D A L ++ ++ V
Sbjct: 52 RLAYLE---------------------PECRVAEM---------LDHAGLERALRGLDGV 81
Query: 143 FHGAATVRFD-EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVST--AFTHCPRERIDE 199
A + V + + + + ++V + A P+
Sbjct: 82 IFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGLPGH 140
Query: 200 EFYPVP 205
E
Sbjct: 141 EGLFYD 146
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 1e-08
Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 30/154 (19%)
Query: 38 MQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR-PKKGKDIQERLDAIFED 96
Q ++TI +TGGTG GK V K+L + + K I + R K ++ + +
Sbjct: 15 HQNMLDNQTILITGGTGSFGKCFVRKVLDT-TNAKKIIVYSRDELKQSEMAMEFN---DP 70
Query: 97 RLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAAT--VRFDEH 154
R+ + + +V D A+ G V+I H AA V E+
Sbjct: 71 RMRFFI-GDVRDLERLNYALEG--------------------VDICIHAAALKHVPIAEY 109
Query: 155 IKM-AVKINVCGVQAMLQLAREMKDLKAFVHVST 187
+ +K N+ G ++ + + + +ST
Sbjct: 110 NPLECIKTNIMGASNVINACLKNA-ISQVIALST 142
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 2e-08
Identities = 29/165 (17%), Positives = 51/165 (30%), Gaps = 41/165 (24%)
Query: 35 GTPMQEFY-----RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQER 89
G+ M + + + GG GF+G +V++LL + ++++
Sbjct: 18 GSHMPVIMNASKLANTNVMVVGGAGFVGSNLVKRLLELGVN--QVHVV------------ 63
Query: 90 LDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRAT---LVKQVNIVFHGA 146
D L + VPD V TD A L + + VFH A
Sbjct: 64 ------DNLLSAEKINVPD-HPAVRFSETSI---------TDDALLASLQDEYDYVFHLA 107
Query: 147 A---TVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188
+ N + + + K LK V+ +
Sbjct: 108 TYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAG 152
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 2e-07
Identities = 27/168 (16%), Positives = 52/168 (30%), Gaps = 44/168 (26%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104
K + +TG G +G+ + E+L L RL D +
Sbjct: 4 KRLLVTGAAGQLGRVMRERLAPMAEIL-----------------RLA----DL------S 36
Query: 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRAT---LVKQVNIVFHGAATVRFDEHIKMAVKI 161
+ V D D +V + + H + ++ + ++
Sbjct: 37 PLDPAGPNEECVQCDL---------ADANAVNAMVAGCDGIVHLGG-ISVEKPFEQILQG 86
Query: 162 NVCGVQAMLQLAREMKDLKAFVHVSTAFTH--CPR-ERIDEEFYPVPL 206
N+ G+ + + AR V S+ T P+ ER+ + P
Sbjct: 87 NIIGLYNLYEAARAH-GQPRIVFASSNHTIGYYPQTERLGPDVPARPD 133
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 3e-07
Identities = 36/283 (12%), Positives = 80/283 (28%), Gaps = 80/283 (28%)
Query: 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEV 106
I +TG +G +G +V L I DI V
Sbjct: 2 ILVTGSSGQIGTELVPYLAEKYGKKNVIAS--------DI-------------------V 34
Query: 107 PDFRSKVSAVAGDCSLPGLGLSETDRATLVK-----QVNIVFHGAA--TVRFDEHIKMAV 159
+ + D ++R + + ++ +FH A + + ++ +A
Sbjct: 35 QRDTGGIKFITLDV---------SNRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAY 85
Query: 160 KINVCGVQAMLQLAREMKDLKAFVHVSTA---FTHCPRERIDEEFYPVPL------KY-- 208
K+N+ G +L+ A++ + ++ V ST P+ ++ P K
Sbjct: 86 KVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAA 144
Query: 209 ENLIQLISETGDEELSEMTPNRVHISGTGW-IDNVYGPIGMLVGIATGVL---------- 257
E L Q E + + T
Sbjct: 145 ELLGQYYYEKFG------------LDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKR 192
Query: 258 --HTHLINLNTVTDMVPVDLVVNSMISIAWSIGESGKVEKAIN 298
+ + N M+ + + +++ + + + + N
Sbjct: 193 EKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYN 235
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 7e-07
Identities = 26/168 (15%), Positives = 45/168 (26%), Gaps = 44/168 (26%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104
+ +TG G +G + L ++ D +
Sbjct: 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLS---------------------DIVDLGAAE 41
Query: 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATL---VKQVNIVFHGAATVRFDEHIKMAVKI 161
+ VA D D + VK + + H V + ++
Sbjct: 42 AHEEI------VACDL---------ADAQAVHDLVKDCDGIIHLGG-VSVERPWNDILQA 85
Query: 162 NVCGVQAMLQLAREMKDLKAFVHVSTAFT---HCPRERIDEEFYPVPL 206
N+ G + + AR V S+ T + RID E P
Sbjct: 86 NIIGAYNLYEAARN-LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPD 132
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 3e-06
Identities = 37/156 (23%), Positives = 54/156 (34%), Gaps = 46/156 (29%)
Query: 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR-----PKKGKDIQERLDAIFEDR 97
+ +TG GF+ VVE+L L+H Y VR K ++Q+R DA + R
Sbjct: 10 EGSLVLVTGANGFVASHVVEQL------LEHGY-KVRGTARSASKLANLQKRWDAKYPGR 62
Query: 98 LFWRLRAEVPDFRSKVS---AVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFD-- 152
A V D + + + G V H A+ V F
Sbjct: 63 F---ETAVVEDMLKQGAYDEVIKG--------------------AAGVAHIASVVSFSNK 99
Query: 153 --EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVS 186
E + A+ G L+ A +K FV S
Sbjct: 100 YDEVVTPAIG----GTLNALRAAAATPSVKRFVLTS 131
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 6e-06
Identities = 25/169 (14%), Positives = 47/169 (27%), Gaps = 40/169 (23%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR-PKKGKDIQERLDAIFEDRLFWRLR 103
K I L G +GF+G ++ + L + +VR P+K K E L +
Sbjct: 5 KKIVLIGASGFVGSALLNEALNR-GF--EVTAVVRHPEKIKIENEHLKVK---------K 52
Query: 104 AEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINV 163
A+V G + V + I +
Sbjct: 53 ADVSSLDEVCEVCKG--------------------ADAVISAFNPGWNNPDI---YDETI 89
Query: 164 CGVQAMLQLAREMKDLKAFVHVSTAFTHCPRE---RIDEEFYPVPLKYE 209
++ ++ + F+ V A + +D P +
Sbjct: 90 KVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPG 137
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 8e-06
Identities = 29/144 (20%), Positives = 42/144 (29%), Gaps = 36/144 (25%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104
I +TGGTGF+G+ VVE + G I R
Sbjct: 3 LKIAVTGGTGFLGQYVVESIK---------------NDGNTP------IILTRSIGNKAI 41
Query: 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVC 164
++ D + D + V+ V H AAT I N
Sbjct: 42 NDYEY------RVSD-------YTLEDLINQLNDVDAVVHLAATRGSQGKISE-FHDNEI 87
Query: 165 GVQAMLQLAREMKDLKAFVHVSTA 188
Q + E ++ V+ ST
Sbjct: 88 LTQNLYDACYE-NNISNIVYASTI 110
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 6e-05
Identities = 26/156 (16%), Positives = 58/156 (37%), Gaps = 30/156 (19%)
Query: 37 PMQEFY-RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFE 95
++F ++K++F+ G +G G+ +++++L + L+ R + + +A
Sbjct: 10 LREDFRMQNKSVFILGASGETGRVLLKEILEQ-GLFSKVTLIGR----RKLTFDEEAYKN 64
Query: 96 DRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHI 155
+ EV DF D A+ + ++ F T R
Sbjct: 65 ------VNQEVVDFE-----------------KLDDYASAFQGHDVGFCCLGTTRGKAGA 101
Query: 156 KMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTH 191
+ V+++ V +LA+ K F +S+
Sbjct: 102 EGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGAD 136
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 6e-05
Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104
K + L G TG G+ +++++L P L + R + + L +L
Sbjct: 6 KRVLLAGATGLTGEHLLDRILSE-PTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDG 64
Query: 105 EV 106
+
Sbjct: 65 SI 66
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 8e-05
Identities = 30/153 (19%), Positives = 46/153 (30%), Gaps = 35/153 (22%)
Query: 38 MQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDR 97
MQ I +TGG GF+G + L+ G+++ D
Sbjct: 1 MQRNTLKHRILITGGAGFIGGHLARALV---------------ASGEEV------TVLDD 39
Query: 98 LFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAA--TVRFDEHI 155
L P L L E D + V +V+H A+ +V
Sbjct: 40 LRV-------PPMIPPEGTGKFLEKPVLELEERD----LSDVRLVYHLASHKSVPRSFKQ 88
Query: 156 KMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188
+ NV + +L L + V ST
Sbjct: 89 PLDYLDNVDSGRHLLALCTS-VGVPKVVVGSTC 120
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 8e-05
Identities = 31/151 (20%), Positives = 57/151 (37%), Gaps = 25/151 (16%)
Query: 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYL--LVRPKKGKDIQERLDAIFEDRLFW 100
++TI +TGG GF+G + + P K + L + + F++
Sbjct: 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL--- 65
Query: 101 RLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAA---TVRFDEHIKM 157
F+ +V +A D + P R + +FH AA T ++ + M
Sbjct: 66 ------IGFKGEV--IAADINNP-----LDLRRLEKLHFDYLFHQAAVSDTTMLNQELVM 112
Query: 158 AVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188
N +L++AR K ++ S+A
Sbjct: 113 KT--NYQAFLNLLEIARSKK--AKVIYASSA 139
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 31/173 (17%), Positives = 54/173 (31%), Gaps = 38/173 (21%)
Query: 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAE 105
I + G G +G+ + ++L++ G E+ I D A
Sbjct: 16 HIAIIGAAGMVGRKLTQRLVK------------DGSLGGKPVEKFTLI--DVFQPEAPAG 61
Query: 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVK----QVNIVFHGAA--TVRFDEHIKMAV 159
V A A D + K + +++FH AA + +
Sbjct: 62 FSG---AVDARAADL---------SAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGY 109
Query: 160 KINVCGVQAMLQLARE----MKDLKAFVHVSTA--FTHCPRERIDEEFYPVPL 206
+IN+ G + + R V S+ F I +EF+ PL
Sbjct: 110 RINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPL 162
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 1e-04
Identities = 42/223 (18%), Positives = 72/223 (32%), Gaps = 67/223 (30%)
Query: 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYL---LVRPKKGKDIQERLDAIFEDRLF 99
+ I +TGG GF+G +V+ L I + L K ++ + A + D+
Sbjct: 45 EGRMIIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGTKFVNLVDLNIADYMDKE- 101
Query: 100 WRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAA---TVRFDEHIK 156
DF ++ A V +FH A T +D
Sbjct: 102 --------DFLIQIMA-----------------GEEFGDVEAIFHEGACSSTTEWDGKYM 136
Query: 157 MAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFT--HCPRERIDEEFYPVPL------KY 208
M N + +L E + F++ S+A T + I+ Y PL K+
Sbjct: 137 M--DNNYQYSKELLHYCLERE--IPFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKF 192
Query: 209 --ENLIQLISETGDEELSEMTPNRVHISGTGWID----NVYGP 245
+ ++ I + + + NVYGP
Sbjct: 193 LFDEYVRQILPEANSQ---------------IVGFRYFNVYGP 220
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 2e-04
Identities = 42/265 (15%), Positives = 86/265 (32%), Gaps = 68/265 (25%)
Query: 9 KYFTDPLELLGEKSFGSPDDIPDDEIGTPMQEFYRDKTIF-----LTGGT-----GFMGK 58
D L + E S + + E ++ + ++F + + K
Sbjct: 349 HVNCDKLTTIIESSL---NVLEPAE----YRKMFDRLSVFPPSAHIPTILLSLIWFDVIK 401
Query: 59 TVVEKLLRSCPHLKHIYLLV--RPKKGK----DIQERLDAIFEDRLFWRLRAEVPD-FRS 111
+ V ++ H Y LV +PK+ I L E+ L + D +
Sbjct: 402 SDVMVVVNKL----HKYSLVEKQPKESTISIPSIYLELKVKLENEY--ALHRSIVDHYNI 455
Query: 112 KVSAVAGDCSLPG--------LG--LSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKI 161
+ + D P +G L + + +VF RF + KI
Sbjct: 456 PKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVF---LDFRF-----LEQKI 507
Query: 162 -----NVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPR--ERID--EEFYP------VPL 206
++L +++K K ++ + P+ ++ +F P +
Sbjct: 508 RHDSTAWNASGSILNTLQQLKFYKPYI-----CDNDPKYERLVNAILDFLPKIEENLICS 562
Query: 207 KYENLIQLISETGDEELSEMTPNRV 231
KY +L+++ DE + E +V
Sbjct: 563 KYTDLLRIALMAEDEAIFEEAHKQV 587
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 3e-04
Identities = 22/171 (12%), Positives = 42/171 (24%), Gaps = 48/171 (28%)
Query: 24 GSPDDIPDDEIGTPMQEFYRD-KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82
GS G F K + + G G + + V+ +L L R
Sbjct: 2 GSSHHHHHHSSGRENLYFQGHMKNVLILGAGGQIARHVINQLADKQTI--KQTLFARQP- 58
Query: 83 GKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATL---VKQV 139
++ + + GD + A L ++
Sbjct: 59 -----AKIHKPYPTN---------------SQIIMGDV---------LNHAALKQAMQGQ 89
Query: 140 NIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFT 190
+IV+ D + A + D+K + V +
Sbjct: 90 DIVYANLTGEDLDIQANSVIA------------AMKACDVKRLIFVLSLGI 128
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 3e-04
Identities = 31/160 (19%), Positives = 52/160 (32%), Gaps = 45/160 (28%)
Query: 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDI----------QERLDA 92
+ K +TG GF+G ++E LL K + + Q LD
Sbjct: 26 QPKVWLITGVAGFIGSNLLETLL---------------KLDQKVVGLDNFATGHQRNLDE 70
Query: 93 IFEDRLFWRLRAEVPDFRSKVSAVAGD-CSLPGLGLSETDRATLVKQVNIVFHGAATVRF 151
+ S + GD +L V+ V H AA
Sbjct: 71 V--------RSLVSEKQWSNFKFIQGDIRNLDDC-------NNACAGVDYVLHQAALGSV 115
Query: 152 DEHIK---MAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188
I + N+ G ML AR+ K +++F + +++
Sbjct: 116 PRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASS 154
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 5e-04
Identities = 27/144 (18%), Positives = 48/144 (33%), Gaps = 16/144 (11%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR-PKKGKDIQERLDAIFEDRLFWRLR 103
T+ +TG +G G+ V +KL LVR + + I D
Sbjct: 5 PTVLVTGASGRTGQIVYKKLKEG-SDKFVAKGLVRSAQGKEKIGGEADVF---------I 54
Query: 104 AEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINV 163
++ D S A G +L + T +K G E + +++
Sbjct: 55 GDITDADSINPAFQGIDAL----VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDW 110
Query: 164 CGVQAMLQLAREMKDLKAFVHVST 187
G + + A+ +K V V +
Sbjct: 111 IGQKNQIDAAKVAG-VKHIVVVGS 133
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 39.2 bits (92), Expect = 7e-04
Identities = 29/159 (18%), Positives = 63/159 (39%), Gaps = 39/159 (24%)
Query: 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR-PKKGKDIQERLDAIFEDRLFWRLRAE 105
IF+ G TG +GK++++ L + + IY R ++
Sbjct: 3 IFIVGSTGRVGKSLLKSLSTT-DY--QIYAGARKVEQVPQYNN----------------- 42
Query: 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCG 165
V AV D + + + A + ++ + + + + K +K+++ G
Sbjct: 43 -------VKAVHFD-----VDWTPEEMAKQLHGMDAIINVSGSGG-----KSLLKVDLYG 85
Query: 166 VQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPV 204
++Q A + + +K F+ +ST F+ P + I F +
Sbjct: 86 AVKLMQAAEKAE-VKRFILLSTIFSLQPEKWIGAGFDAL 123
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 303 | |||
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.96 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.96 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.96 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.96 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.95 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.95 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.95 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.95 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.95 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.95 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.95 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.94 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.94 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.94 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.94 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.94 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.94 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.94 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.94 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.94 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.94 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.94 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.94 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.94 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.94 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.94 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.94 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.94 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.94 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.94 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.94 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.93 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.93 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.93 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.93 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.93 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.93 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.93 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.93 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.93 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.93 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.93 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.93 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.93 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.92 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.92 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.92 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.92 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.92 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.92 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.92 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.92 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.92 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.92 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.92 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.92 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.92 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.91 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.91 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.91 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.91 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.91 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.91 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.91 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.91 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.9 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.9 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.9 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.9 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.9 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.9 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.89 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.89 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.88 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.88 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.87 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.87 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.87 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.87 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.86 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.86 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.86 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.86 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.85 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.85 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.85 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.85 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.85 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.84 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.84 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.84 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.84 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.84 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.84 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.84 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.84 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.84 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.83 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.83 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.83 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.83 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.83 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.83 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.83 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.83 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.83 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.83 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.83 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.83 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.82 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.82 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.82 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.82 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.82 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.82 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.82 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.82 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.82 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.82 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.82 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.82 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.82 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.82 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.82 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.82 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.82 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.82 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.82 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.82 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.82 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.81 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.81 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.81 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.81 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.81 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.81 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.81 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.81 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.81 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.81 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.81 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.81 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.81 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.81 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.81 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.81 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.81 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.81 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.81 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.81 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.81 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.81 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.81 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.81 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.81 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.81 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.81 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.81 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.81 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.81 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.81 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.8 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.8 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.8 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.8 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.8 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.8 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.8 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.8 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.8 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.8 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.8 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.8 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.8 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.8 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.8 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.8 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.8 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.8 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.8 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.8 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.8 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.8 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.8 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.8 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.8 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.8 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.8 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.8 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.8 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.8 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.8 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.8 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.8 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.8 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.8 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.79 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.79 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.79 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.79 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.79 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.79 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.79 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.79 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.79 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.79 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.79 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.79 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.79 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.79 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.79 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.79 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.79 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.79 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.79 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.79 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.79 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.79 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.79 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.79 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.79 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.79 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.79 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.78 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.78 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.78 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.78 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.78 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.78 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.78 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.78 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.78 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.78 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.78 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.78 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.78 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.78 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.78 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.78 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.78 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.78 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.78 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.78 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.78 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.77 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.77 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.77 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.77 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.77 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.77 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.77 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.77 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.77 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.77 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.77 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.77 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.77 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.77 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.77 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.77 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.76 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.76 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.76 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.76 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.76 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.76 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.76 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.76 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.76 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.76 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.76 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.75 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.75 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.75 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.75 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.75 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.75 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.75 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.74 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.74 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.74 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.74 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.74 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.73 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.73 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.73 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.72 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.72 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.71 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.71 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.71 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.69 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.68 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.68 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.66 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.65 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.65 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.61 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.5 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.49 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.48 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.45 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.41 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.4 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.39 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.37 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.34 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.33 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.32 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.29 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.29 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.25 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.17 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.98 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.98 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.8 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.79 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.75 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.7 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.61 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.6 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.43 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.4 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.35 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.32 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.26 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 98.24 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 98.23 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 98.21 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.15 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.15 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.04 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.04 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.02 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.99 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.9 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.81 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.79 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.67 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.59 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 97.55 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 97.42 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.4 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 97.34 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 97.33 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.27 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.26 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.18 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.18 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.16 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.16 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.12 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.1 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.09 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.05 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.05 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.02 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 97.02 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.01 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 96.97 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 96.95 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 96.94 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 96.93 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 96.9 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 96.9 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 96.89 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 96.89 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 96.87 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 96.86 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 96.82 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 96.81 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 96.77 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 96.72 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 96.7 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.69 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 96.68 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 96.67 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 96.65 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 96.61 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 96.54 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 96.52 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 96.51 | |
| 2i6t_A | 303 | Ubiquitin-conjugating enzyme E2-like isoform A; L- | 96.49 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 96.49 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 96.47 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 96.47 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 96.44 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 96.43 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 96.4 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 96.38 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 96.36 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 96.33 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 96.32 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 96.23 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.2 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 96.2 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 96.19 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 96.16 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 96.15 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 96.15 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 96.13 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 96.1 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 96.09 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 96.08 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 96.07 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 96.04 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 96.04 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 96.03 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 96.01 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 96.0 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 95.92 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 95.91 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 95.85 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 95.84 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 95.83 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 95.83 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 95.81 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 95.76 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 95.7 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 95.69 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 95.66 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 95.66 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 95.63 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 95.61 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 95.6 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 95.53 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 95.49 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 95.48 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 95.48 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 95.46 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 95.43 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 95.4 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 95.37 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 95.34 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 95.31 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 95.3 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 95.29 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 95.26 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 95.24 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 95.23 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 95.22 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 95.21 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 95.19 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 95.17 | |
| 1vkn_A | 351 | N-acetyl-gamma-glutamyl-phosphate reductase; TM178 | 95.15 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 95.15 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 95.14 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 95.13 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 95.13 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 95.07 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 95.06 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 95.06 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 95.02 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 94.88 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 94.85 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 94.84 | |
| 1y8q_B | 640 | Anthracycline-, ubiquitin-like 2 activating enzyme | 94.83 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 94.72 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 94.67 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 94.64 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 94.58 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 94.53 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 94.53 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 94.51 | |
| 3pid_A | 432 | UDP-glucose 6-dehydrogenase; rossmann fold, oxidor | 94.49 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 94.45 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 94.42 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 94.42 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 94.37 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 94.37 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 94.35 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 94.34 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 94.31 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 94.31 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 94.29 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 94.27 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 94.05 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 94.05 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 94.03 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 94.01 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 94.0 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 94.0 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 93.96 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 93.95 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 93.93 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 93.89 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 93.89 | |
| 1u8x_X | 472 | Maltose-6'-phosphate glucosidase; structural genom | 93.86 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 93.85 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 93.85 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 93.82 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 93.76 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 93.74 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 93.73 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 93.72 | |
| 3ado_A | 319 | Lambda-crystallin; L-gulonate 3-dehydrogenase, str | 93.7 | |
| 4dgs_A | 340 | Dehydrogenase; structural genomics, PSI-biology, N | 93.69 | |
| 3kb6_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 93.68 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 93.65 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 93.62 |
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-28 Score=220.34 Aligned_cols=227 Identities=19% Similarity=0.126 Sum_probs=170.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|||||||||||++|++.|++.|++ |++++|...... ..+..+... .......+++++.+|++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~--~~~~~~~~~--------~~~~~~~~~~~~~~Dl~ 89 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQV---VIGLDNFSTGHQ--YNLDEVKTL--------VSTEQWSRFCFIEGDIR 89 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCH--HHHHHHHHT--------SCHHHHTTEEEEECCTT
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCCCCch--hhhhhhhhc--------cccccCCceEEEEccCC
Confidence 56789999999999999999999999987 999999765332 122222110 00000158999999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcc--cCCCCc
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFT--HCPRER 196 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~--~~~~~~ 196 (303)
|.+ ++..+++++|+|||+|+.... ..++...+++|+.++.++++++.+. +++||||+||.++ .....+
T Consensus 90 d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~~~ 162 (351)
T 3ruf_A 90 DLT------TCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAASSSTYGDHPALP 162 (351)
T ss_dssp CHH------HHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCSS
T ss_pred CHH------HHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEecHHhcCCCCCCC
Confidence 876 789999999999999997543 3445678899999999999999998 8999999999944 444457
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH------------HHHHHHHhhhhhhcc
Q psy17679 197 IDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI------------GMLVGIATGVLHTHL 261 (303)
Q Consensus 197 ~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~------------~~~~~~~~~~~~~~~ 261 (303)
++|+....| ...|..+|..+|.+++.+....+ +++||+.+ |||. .++..+..+....++
T Consensus 163 ~~E~~~~~p---~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (351)
T 3ruf_A 163 KVEENIGNP---LSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNV---FGRRQDPNGAYAAVIPKWTAAMLKGDDVYIN 236 (351)
T ss_dssp BCTTCCCCC---CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSE---ESTTCCCCSTTCCHHHHHHHHHHHTCCCEEE
T ss_pred CccCCCCCC---CChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCce---eCcCCCCCcchhhHHHHHHHHHHcCCCcEEe
Confidence 777765444 45677788889999987755433 78888644 4442 344555666666777
Q ss_pred CCCCccccceehhHHHHHHHHHHhh-cccCCcch
Q psy17679 262 INLNTVTDMVPVDLVVNSMISIAWS-IGESGKVE 294 (303)
Q Consensus 262 ~~~~~~~~~i~v~D~a~ai~~~~~~-~~~~~~~~ 294 (303)
+++...++|||++|+|++++.++.. +...+..+
T Consensus 237 g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ 270 (351)
T 3ruf_A 237 GDGETSRDFCYIDNVIQMNILSALAKDSAKDNIY 270 (351)
T ss_dssp SSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred CCCCeEEeeEEHHHHHHHHHHHHhhccccCCCEE
Confidence 8889999999999999999999987 33444443
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-28 Score=215.08 Aligned_cols=206 Identities=17% Similarity=0.092 Sum_probs=162.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+|||||||||+|+++++.|++.|++ |++++|++.... ..+++++.+|++ .
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~------------------------~~~~~~~~~Dl~-~ 53 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNT---PIILTRSIGNKA------------------------INDYEYRVSDYT-L 53 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCCC-----------------------------CCEEEECCCC-H
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCE---EEEEeCCCCccc------------------------CCceEEEEcccc-H
Confidence 478999999999999999999999987 999999833110 137889999999 6
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCCccccCC
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRERIDEEF 201 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~~~~E~~ 201 (303)
+ .+.++++++|+|||+|+..... ++...+++|+.++.++++++.+. +++||||+||.++++ ...+++|+.
T Consensus 54 ~------~~~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~vyg~~~~~~~~E~~ 125 (311)
T 3m2p_A 54 E------DLINQLNDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYEN-NISNIVYASTISAYSDETSLPWNEKE 125 (311)
T ss_dssp H------HHHHHTTTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCCGGGCSBCTTS
T ss_pred H------HHHHhhcCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCCCCCCCCCC
Confidence 6 7899999999999999987655 56678899999999999999998 899999999985543 335677776
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccCh-----HHHHHHHHhhhhhhccCCCCccccceeh
Q psy17679 202 YPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGP-----IGMLVGIATGVLHTHLINLNTVTDMVPV 273 (303)
Q Consensus 202 ~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v 273 (303)
...| ...|..+|..+|++++.+....+ +++||+.+.+.... ..++..+..+....+++.++..++|+|+
T Consensus 126 ~~~p---~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v 202 (311)
T 3m2p_A 126 LPLP---DLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYA 202 (311)
T ss_dssp CCCC---SSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEH
T ss_pred CCCC---CchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEH
Confidence 4444 45677888889999998765433 78888765433221 1244555556666677888999999999
Q ss_pred hHHHHHHHHHHhhcc
Q psy17679 274 DLVVNSMISIAWSIG 288 (303)
Q Consensus 274 ~D~a~ai~~~~~~~~ 288 (303)
+|+|++++.++.++.
T Consensus 203 ~Dva~a~~~~~~~~~ 217 (311)
T 3m2p_A 203 KDAAKSVIYALKQEK 217 (311)
T ss_dssp HHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999998775
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=222.71 Aligned_cols=222 Identities=14% Similarity=0.117 Sum_probs=168.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
.|++|+|||||||||||++|++.|++. |++ |++++|++...... ....+++++.+|
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~---V~~~~r~~~~~~~~--------------------~~~~~v~~~~~D 77 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWE---VFGMDMQTDRLGDL--------------------VKHERMHFFEGD 77 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCE---EEEEESCCTTTGGG--------------------GGSTTEEEEECC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCE---EEEEeCChhhhhhh--------------------ccCCCeEEEeCc
Confidence 366789999999999999999999999 887 99999986532210 002689999999
Q ss_pred CC-CCCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCc--ccCC
Q psy17679 120 CS-LPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAF--THCP 193 (303)
Q Consensus 120 l~-d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~--~~~~ 193 (303)
++ +.+ .+..+++++|+|||+|+.... ..+....+++|+.++.++++++.+. + +||||+||.+ +...
T Consensus 78 l~~d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~SS~~vyg~~~ 149 (372)
T 3slg_A 78 ITINKE------WVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMCA 149 (372)
T ss_dssp TTTCHH------HHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEECCGGGGBSCC
T ss_pred cCCCHH------HHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeCcHHHhCCCC
Confidence 99 655 688888999999999998653 2355678899999999999999998 6 8999999994 4444
Q ss_pred CCccccCCCC---CCC-ChhhHHHHHHHHHHHHHHhhCcCCc--EEeecceecCccChH----------------HHHHH
Q psy17679 194 RERIDEEFYP---VPL-KYENLIQLISETGDEELSEMTPNRV--HISGTGWIDNVYGPI----------------GMLVG 251 (303)
Q Consensus 194 ~~~~~E~~~~---~~~-~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~~~~~g~~----------------~~~~~ 251 (303)
..++.|+... .|. .+...|..+|..+|.+++.+..... +++||+.+ |||. .++..
T Consensus 150 ~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v---~G~~~~~~~~~~~~~~~~~~~~~~~ 226 (372)
T 3slg_A 150 DEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNW---IGPGLDSIYTPKEGSSRVVTQFLGH 226 (372)
T ss_dssp CSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSE---ECSSCCCTTCSBSCSCHHHHHHHHH
T ss_pred CCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccc---cCCCcccccccccccchHHHHHHHH
Confidence 4566666533 222 4666888999999999998865522 78888644 4432 24455
Q ss_pred HHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc--cCCcchhh
Q psy17679 252 IATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG--ESGKVEKA 296 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~--~~~~~~~~ 296 (303)
+..+....+++.+...++|||++|+|++++.++.++. ..+..+++
T Consensus 227 ~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni 273 (372)
T 3slg_A 227 IVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNI 273 (372)
T ss_dssp HHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEE
T ss_pred HHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEe
Confidence 5566666677778899999999999999999999875 34444433
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-28 Score=219.00 Aligned_cols=221 Identities=18% Similarity=0.122 Sum_probs=161.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+.+|+|||||||||||++|++.|++.|+.+ .|++++|....... ..++ ......+++++.+|++
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~~~~~~~~~-~~l~--------------~~~~~~~~~~~~~Dl~ 85 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETY-KIINFDALTYSGNL-NNVK--------------SIQDHPNYYFVKGEIQ 85 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTE-EEEEEECCCTTCCG-GGGT--------------TTTTCTTEEEEECCTT
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCc-EEEEEeccccccch-hhhh--------------hhccCCCeEEEEcCCC
Confidence 567899999999999999999999999552 37788876532210 0100 0011258999999999
Q ss_pred CCCCCCCHHHHHHHhcc--ccEEEEcceecccc---ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC---
Q psy17679 122 LPGLGLSETDRATLVKQ--VNIVFHGAATVRFD---EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP--- 193 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~--~dvVi~~a~~~~~~---~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~--- 193 (303)
|.+ .+..++++ +|+|||+|+..... .++...+++|+.++.++++++.+. +++||||+||.++++.
T Consensus 86 d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vy~~~~~ 158 (346)
T 4egb_A 86 NGE------LLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQVSTDEVYGSLGK 158 (346)
T ss_dssp CHH------HHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEEEEGGGGCCCCS
T ss_pred CHH------HHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeCchHHhCCCCc
Confidence 976 78888886 99999999986543 455678899999999999999998 8999999999955443
Q ss_pred CCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccC-----hHHHHHHHHhhhhhhccCCCC
Q psy17679 194 RERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYG-----PIGMLVGIATGVLHTHLINLN 265 (303)
Q Consensus 194 ~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~ 265 (303)
..+++|+....| ...|..+|..+|.+++.+....+ +++||+.+.+... ...++..+..+....+++.+.
T Consensus 159 ~~~~~E~~~~~p---~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (346)
T 4egb_A 159 TGRFTEETPLAP---NSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGL 235 (346)
T ss_dssp SCCBCTTSCCCC---CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSC
T ss_pred CCCcCCCCCCCC---CChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCC
Confidence 346777765444 45677788889999988765433 7888875533221 012445555666666778889
Q ss_pred ccccceehhHHHHHHHHHHhhcc
Q psy17679 266 TVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 266 ~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..++|||++|+|++++.++.++.
T Consensus 236 ~~~~~i~v~Dva~a~~~~~~~~~ 258 (346)
T 4egb_A 236 NVRDWLHVTDHCSAIDVVLHKGR 258 (346)
T ss_dssp CEECEEEHHHHHHHHHHHHHHCC
T ss_pred eEEeeEEHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=214.65 Aligned_cols=215 Identities=16% Similarity=0.119 Sum_probs=162.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
..++|+|||||||||||++|++.|++.|++ |++++|++.. .++.++.+|+
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~---------------------------~~~~~~~~Dl 65 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRT---VRGFDLRPSG---------------------------TGGEEVVGSL 65 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCC---EEEEESSCCS---------------------------SCCSEEESCT
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCE---EEEEeCCCCC---------------------------CCccEEecCc
Confidence 456789999999999999999999999998 9999997641 4678999999
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceeccccc-cHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC----CCC
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVRFDE-HIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC----PRE 195 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~-~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~----~~~ 195 (303)
.|.+ .+..+++++|+|||+|+...... .+...+++|+.++.++++++.+. +++||||+||.++++ ...
T Consensus 66 ~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~V~~SS~~vyg~~~~~~~ 138 (347)
T 4id9_A 66 EDGQ------ALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAA-GVRRFVFASSGEVYPENRPEFL 138 (347)
T ss_dssp TCHH------HHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGTTTTSCSSS
T ss_pred CCHH------HHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHHhCCCCCCCC
Confidence 9876 78899999999999999865433 34788999999999999999998 899999999985543 334
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceec---------Ccc-ChHH---------------
Q psy17679 196 RIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWID---------NVY-GPIG--------------- 247 (303)
Q Consensus 196 ~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~---------~~~-g~~~--------------- 247 (303)
+++|+.... +...|..+|..+|.+++.+....+ +++||+.+. +.+ ||..
T Consensus 139 ~~~E~~~~~---~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~ 215 (347)
T 4id9_A 139 PVTEDHPLC---PNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNA 215 (347)
T ss_dssp SBCTTSCCC---CCSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCH
T ss_pred CcCCCCCCC---CCChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchh
Confidence 677775444 455677888899999987765443 788887553 000 5541
Q ss_pred ----HHHHHHhhhhhhccCCCCccccc----eehhHHHHHHHHHHhhcccCCcchh
Q psy17679 248 ----MLVGIATGVLHTHLINLNTVTDM----VPVDLVVNSMISIAWSIGESGKVEK 295 (303)
Q Consensus 248 ----~~~~~~~~~~~~~~~~~~~~~~~----i~v~D~a~ai~~~~~~~~~~~~~~~ 295 (303)
++.....+....+++.+...++| +|++|+|++++.++.++...+..++
T Consensus 216 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~n 271 (347)
T 4id9_A 216 AIAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFN 271 (347)
T ss_dssp HHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEE
T ss_pred HHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEE
Confidence 22233334444567778888999 9999999999999998754444443
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.4e-28 Score=226.54 Aligned_cols=251 Identities=23% Similarity=0.228 Sum_probs=175.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhc---CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRS---CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~---g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.++|+|||||||||||++++++|++. |++ |++++|+........++.+.+..+....+..+......++.++.+
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~---V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 147 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGR---LICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAG 147 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCE---EEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCE---EEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence 56789999999999999999999999 676 999999877555444443332211000000000111268999999
Q ss_pred cCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCCc
Q psy17679 119 DCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRER 196 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~~ 196 (303)
|++++.++++.+.+..+++++|+|||+||.... .++...+++|+.++.+++++|.+. ++++|||+||.++.. ...+
T Consensus 148 Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~V~iSS~~v~~~~~~~~ 225 (478)
T 4dqv_A 148 DKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALTT-KLKPFTYVSTADVGAAIEPSA 225 (478)
T ss_dssp CTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTSS-SCCCEEEEEEGGGGTTSCTTT
T ss_pred ECCCcccCCCHHHHHHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeehhhcCccCCCC
Confidence 999998888888999999999999999998777 666678899999999999999998 889999999985543 3445
Q ss_pred cccCCCCCCCCh--------hhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCc--c----ChHHHHHHHHh-----
Q psy17679 197 IDEEFYPVPLKY--------ENLIQLISETGDEELSEMTPNRV---HISGTGWIDNV--Y----GPIGMLVGIAT----- 254 (303)
Q Consensus 197 ~~E~~~~~~~~~--------~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~--~----g~~~~~~~~~~----- 254 (303)
++|+....|..+ ...|..+|+.+|.+++.+....+ +++|||.+.+. + ....++..++.
T Consensus 226 ~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~ 305 (478)
T 4dqv_A 226 FTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMAT 305 (478)
T ss_dssp CCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHH
T ss_pred cCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHc
Confidence 666543322221 24588999999999998865322 78888866432 1 11123333322
Q ss_pred hhhhhc-cCC------CCccccceehhHHHHHHHHHHhh----cccCCcchhhc
Q psy17679 255 GVLHTH-LIN------LNTVTDMVPVDLVVNSMISIAWS----IGESGKVEKAI 297 (303)
Q Consensus 255 ~~~~~~-~~~------~~~~~~~i~v~D~a~ai~~~~~~----~~~~~~~~~~~ 297 (303)
|..... ++. +...++|+|++|+|++++.++.. +...+..+++.
T Consensus 306 g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~ 359 (478)
T 4dqv_A 306 GIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVM 359 (478)
T ss_dssp CEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEES
T ss_pred CcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEec
Confidence 221111 111 25778999999999999999986 44444444443
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.8e-27 Score=211.16 Aligned_cols=223 Identities=19% Similarity=0.157 Sum_probs=162.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHh--cCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLR--SCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~--~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+++|+||||||+||||+++++.|++ .|++ |++++|+...........+ .+.........++.++.+
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~---V~~~~r~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 75 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKAK---VVVLDKFRSNTLFSNNRPS--------SLGHFKNLIGFKGEVIAA 75 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSE---EEEEECCCCC-------CC--------CCCCGGGGTTCCSEEEEC
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCe---EEEEECCCccccccccchh--------hhhhhhhccccCceEEEC
Confidence 46779999999999999999999999 8887 9999997642110000000 000000011246789999
Q ss_pred cCCCCCCCCCHHHHHHH-hccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC-CC
Q psy17679 119 DCSLPGLGLSETDRATL-VKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP-RE 195 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~-~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~-~~ 195 (303)
|++|.+ .+..+ ..++|+|||+||.... ..++...+++|+.++.++++++.+. +++ |||+||.++++. ..
T Consensus 76 Dl~d~~------~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~SS~~vyg~~~~ 147 (362)
T 3sxp_A 76 DINNPL------DLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYASSAGVYGNTKA 147 (362)
T ss_dssp CTTCHH------HHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEEEGGGGCSCCS
T ss_pred CCCCHH------HHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeCcHHHhCCCCC
Confidence 999976 67787 7799999999997664 4567889999999999999999988 666 999999744332 22
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc-EEeecceecCccChH------------HHHHHHHhhhhhhccC
Q psy17679 196 RIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV-HISGTGWIDNVYGPI------------GMLVGIATGVLHTHLI 262 (303)
Q Consensus 196 ~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~-~ii~pg~~~~~~g~~------------~~~~~~~~~~~~~~~~ 262 (303)
+++|+....| .+.|..+|..+|.+++.+..... +++||+ ++|||. .++.....+....+++
T Consensus 148 ~~~E~~~~~p---~~~Y~~sK~~~E~~~~~~~~~~~~~~lR~~---~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (362)
T 3sxp_A 148 PNVVGKNESP---ENVYGFSKLCMDEFVLSHSNDNVQVGLRYF---NVYGPREFYKEKTASMVLQLALGAMAFKEVKLFE 221 (362)
T ss_dssp SBCTTSCCCC---SSHHHHHHHHHHHHHHHTTTTSCEEEEEEC---SEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSG
T ss_pred CCCCCCCCCC---CChhHHHHHHHHHHHHHHhccCCEEEEEeC---ceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEEC
Confidence 6777764444 45677888899999999877633 788875 445543 2344445555556667
Q ss_pred CCCccccceehhHHHHHHHHHHhhcc
Q psy17679 263 NLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 263 ~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+...++|+|++|+|++++.++.++.
T Consensus 222 ~g~~~~~~i~v~Dva~ai~~~~~~~~ 247 (362)
T 3sxp_A 222 FGEQLRDFVYIEDVIQANVKAMKAQK 247 (362)
T ss_dssp GGCCEEECEEHHHHHHHHHHHTTCSS
T ss_pred CCCeEEccEEHHHHHHHHHHHHhcCC
Confidence 78889999999999999999998764
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.95 E-value=9.3e-27 Score=209.04 Aligned_cols=226 Identities=15% Similarity=0.142 Sum_probs=163.5
Q ss_pred ccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEE-E
Q psy17679 39 QEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAV-A 117 (303)
Q Consensus 39 ~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~-~ 117 (303)
...+++|+||||||+||||+++++.|++.|++ |++++|+... .+.+.+.+... ...+++++ .
T Consensus 6 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~---~~~~~~~~~~~-----------~~~~~~~~~~ 68 (342)
T 1y1p_A 6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYK---VRGTARSASK---LANLQKRWDAK-----------YPGRFETAVV 68 (342)
T ss_dssp CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHHHHHHHH-----------STTTEEEEEC
T ss_pred ccCCCCCEEEEECCccHHHHHHHHHHHHCCCE---EEEEeCCccc---HHHHHHHhhcc-----------CCCceEEEEe
Confidence 34567899999999999999999999999987 9999996432 11222211100 01468888 8
Q ss_pred ecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC--C-
Q psy17679 118 GDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP--R- 194 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~--~- 194 (303)
+|++|.+ .+..+++++|+|||+|+......++...+++|+.++.++++++.+..+++||||+||.++... .
T Consensus 69 ~D~~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~ 142 (342)
T 1y1p_A 69 EDMLKQG------AYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPN 142 (342)
T ss_dssp SCTTSTT------TTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTT
T ss_pred cCCcChH------HHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCC
Confidence 9999987 567778899999999998766667778999999999999999985337899999999855421 1
Q ss_pred ---CccccCCCC-------------CCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecceecCccCh--------
Q psy17679 195 ---ERIDEEFYP-------------VPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGWIDNVYGP-------- 245 (303)
Q Consensus 195 ---~~~~E~~~~-------------~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~~~~~~g~-------- 245 (303)
.+++|+.+. .+..+...|..+|..+|.+++.+...+ . ++++||.+.+....
T Consensus 143 ~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~ 222 (342)
T 1y1p_A 143 VEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGST 222 (342)
T ss_dssp CCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHH
T ss_pred CCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccH
Confidence 456666521 134567889999999999998775432 2 67888765433211
Q ss_pred HHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 246 IGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..++..+..+....+++.+ ..++|+|++|+|++++.++.++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~~ 264 (342)
T 1y1p_A 223 SGWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLGCLVLPQ 264 (342)
T ss_dssp HHHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHHHHcCcc
Confidence 1234444555544445444 67899999999999999998654
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=209.62 Aligned_cols=222 Identities=18% Similarity=0.084 Sum_probs=163.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|||||||||||+++++.|++.|++ |++++|+.... .+.++.+... +.. ....++.++.+|++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~--~~~~~~~~~~-----~~~---~~~~~~~~~~~Dl~ 91 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQK---VVGLDNFATGH--QRNLDEVRSL-----VSE---KQWSNFKFIQGDIR 91 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCC--HHHHHHHHHH-----SCH---HHHTTEEEEECCTT
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCCccc--hhhHHHHhhh-----ccc---ccCCceEEEECCCC
Confidence 66789999999999999999999999987 99999976432 1222222110 000 00157899999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCCc
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRER 196 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~~ 196 (303)
|.+ ++..+++++|+|||+|+.... ..++...+++|+.++.++++++.+. +++||||+||.++.. ...+
T Consensus 92 d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~ 164 (352)
T 1sb8_A 92 NLD------DCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPGLP 164 (352)
T ss_dssp SHH------HHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCSS
T ss_pred CHH------HHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhcCCCCCCC
Confidence 876 788899999999999997543 2456778899999999999999998 889999999995543 3346
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccCh---------HHHHHHHHhhhhhhccCCC
Q psy17679 197 IDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGP---------IGMLVGIATGVLHTHLINL 264 (303)
Q Consensus 197 ~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~---------~~~~~~~~~~~~~~~~~~~ 264 (303)
++|+....| ...|..+|..+|.+++.+...++ +++|||.+.+.... ..++..+..+....+++++
T Consensus 165 ~~E~~~~~~---~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g 241 (352)
T 1sb8_A 165 KVEDTIGKP---LSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDG 241 (352)
T ss_dssp BCTTCCCCC---CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSS
T ss_pred CCCCCCCCC---CChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCC
Confidence 777765444 44667788889999887654322 78888755332211 1233444556555567788
Q ss_pred CccccceehhHHHHHHHHHHhh
Q psy17679 265 NTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 265 ~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
...++|+|++|+|++++.++..
T Consensus 242 ~~~~~~i~v~Dva~a~~~~~~~ 263 (352)
T 1sb8_A 242 ETSRDFCYIENTVQANLLAATA 263 (352)
T ss_dssp CCEECCEEHHHHHHHHHHHHTC
T ss_pred CceEeeEEHHHHHHHHHHHHhc
Confidence 8899999999999999998876
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-26 Score=205.64 Aligned_cols=217 Identities=18% Similarity=0.127 Sum_probs=158.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCccc-HHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKD-IQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~-~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
++|+||||||+||||+++++.|++.|++ |++++|+..... ..+.+.... ..++.++.+|++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~Dl~ 65 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYD---VVIADNLVNSKREAIARIEKIT---------------GKTPAFHETDVS 65 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECCCSSSCTHHHHHHHHHH---------------SCCCEEECCCTT
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCc---EEEEecCCcchHHHHHHHHhhc---------------CCCceEEEeecC
Confidence 4579999999999999999999999987 999999765432 222221111 157889999999
Q ss_pred CCCCCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCccc--CCC
Q psy17679 122 LPGLGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTH--CPR 194 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~--~~~ 194 (303)
|.+ ++..+++ ++|+|||+||.... .......+++|+.++.++++++.+. ++++|||+||..+. ...
T Consensus 66 d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~~ 138 (341)
T 3enk_A 66 DER------ALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFSSSATVYGVPER 138 (341)
T ss_dssp CHH------HHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGBCSCSS
T ss_pred CHH------HHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEecceEecCCCC
Confidence 876 7888887 89999999998653 2344578899999999999999998 78999999998444 344
Q ss_pred CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc----EEeecceecCcc-----Ch------H---HHHHHHHhhh
Q psy17679 195 ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV----HISGTGWIDNVY-----GP------I---GMLVGIATGV 256 (303)
Q Consensus 195 ~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~----~ii~pg~~~~~~-----g~------~---~~~~~~~~~~ 256 (303)
.+++|+... .+...|..+|..+|.+++.+...+. +++||+.+.+.. |+ . ..+.....+.
T Consensus 139 ~~~~e~~~~---~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 215 (341)
T 3enk_A 139 SPIDETFPL---SATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGK 215 (341)
T ss_dssp SSBCTTSCC---BCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTS
T ss_pred CCCCCCCCC---CCCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcC
Confidence 467776543 3455677888889999987754322 788876543221 11 1 1233333332
Q ss_pred --hhhccC------CCCccccceehhHHHHHHHHHHhhc
Q psy17679 257 --LHTHLI------NLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 257 --~~~~~~------~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...+++ .+.+.++|+|++|+|++++.++.++
T Consensus 216 ~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~ 254 (341)
T 3enk_A 216 LEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDAL 254 (341)
T ss_dssp SSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHH
T ss_pred CCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhh
Confidence 223445 6788999999999999999999873
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.9e-27 Score=208.60 Aligned_cols=203 Identities=16% Similarity=0.118 Sum_probs=151.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|||||||||||+++++.|++.|++ |++++|.+..... ....++.++.+|+.|.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~---------------------~~~~~~~~~~~Dl~d~~ 56 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYE---VVVVDNLSSGRRE---------------------FVNPSAELHVRDLKDYS 56 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEECCCSSCCGG---------------------GSCTTSEEECCCTTSTT
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCE---EEEEeCCCCCchh---------------------hcCCCceEEECccccHH
Confidence 68999999999999999999999987 9999997653210 01267889999999875
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc---ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCccc--CCCCcccc
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR---FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTH--CPRERIDE 199 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~---~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~--~~~~~~~E 199 (303)
+..++++ |+|||+|+... ...++...+++|+.++.++++++.+. +++||||+||.+++ ....+++|
T Consensus 57 -------~~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~vyg~~~~~~~~e 127 (312)
T 3ko8_A 57 -------WGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASSSTVYGDADVIPTPE 127 (312)
T ss_dssp -------TTTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSSSSBCT
T ss_pred -------HHhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCcHHHhCCCCCCCCCC
Confidence 3445556 99999999643 23456788899999999999999998 88999999998544 34456777
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH-------HHHHHHHhh-hhhhccCCCCccc
Q psy17679 200 EFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI-------GMLVGIATG-VLHTHLINLNTVT 268 (303)
Q Consensus 200 ~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~-------~~~~~~~~~-~~~~~~~~~~~~~ 268 (303)
+.... +...|..+|..+|.+++.+...++ +++||+.+ |||. .++..+..+ ....+++.+...+
T Consensus 128 ~~~~~---p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 201 (312)
T 3ko8_A 128 EEPYK---PISVYGAAKAAGEVMCATYARLFGVRCLAVRYANV---VGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRK 201 (312)
T ss_dssp TSCCC---CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEE---ECTTCCSSHHHHHHHHHHHCTTEEEEC----CEE
T ss_pred CCCCC---CCChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccc---cCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEE
Confidence 75444 445677888889999988765433 78888755 4442 233344444 3334677888999
Q ss_pred cceehhHHHHHHHHHHhh
Q psy17679 269 DMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 269 ~~i~v~D~a~ai~~~~~~ 286 (303)
+|+|++|+|++++.++.+
T Consensus 202 ~~i~v~Dva~a~~~~~~~ 219 (312)
T 3ko8_A 202 SYLYVRDAVEATLAAWKK 219 (312)
T ss_dssp CEEEHHHHHHHHHHHHHH
T ss_pred eeEEHHHHHHHHHHHHHh
Confidence 999999999999999998
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=9.6e-27 Score=212.48 Aligned_cols=220 Identities=14% Similarity=0.069 Sum_probs=158.4
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcC-CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSC-PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g-~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
.+++|+|||||||||||+++++.|++.| ++ |++++|+..... +. +. ...+++++.+|
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~--~~------------l~-----~~~~v~~~~~D 86 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQ---VHVVDNLLSAEK--IN------------VP-----DHPAVRFSETS 86 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSE---EEEECCCTTCCG--GG------------SC-----CCTTEEEECSC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCce---EEEEECCCCCch--hh------------cc-----CCCceEEEECC
Confidence 3567899999999999999999999999 76 999999754321 00 00 02578999999
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcceecccc---ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CC
Q psy17679 120 CSLPGLGLSETDRATLVKQVNIVFHGAATVRFD---EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PR 194 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~---~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~ 194 (303)
++|.+ .+..+++++|+|||+|+..... .++...+++|+.++.++++++.+..+++||||+||.++++ ..
T Consensus 87 l~d~~------~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~ 160 (377)
T 2q1s_A 87 ITDDA------LLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTF 160 (377)
T ss_dssp TTCHH------HHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------
T ss_pred CCCHH------HHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCC
Confidence 99876 7888889999999999976532 3567788999999999999998753578999999995443 22
Q ss_pred Cccc--cCCCCCCC-ChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccC---------h---------HHHHH
Q psy17679 195 ERID--EEFYPVPL-KYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYG---------P---------IGMLV 250 (303)
Q Consensus 195 ~~~~--E~~~~~~~-~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g---------~---------~~~~~ 250 (303)
.+++ |+.+..|. .+...|..+|..+|.+++.+....+ ++++||.+.+... . ..++.
T Consensus 161 ~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (377)
T 2q1s_A 161 DDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIY 240 (377)
T ss_dssp ------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHH
T ss_pred CCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHH
Confidence 3556 66522233 4456688888999999987754322 7888876543322 1 12334
Q ss_pred HHHhhhhhhccCCCCccccceehhHHHHH-HHHHHhhcc
Q psy17679 251 GIATGVLHTHLINLNTVTDMVPVDLVVNS-MISIAWSIG 288 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~a-i~~~~~~~~ 288 (303)
.+..+....+++.++..++|+|++|+|++ ++.++.++.
T Consensus 241 ~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~ 279 (377)
T 2q1s_A 241 KALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP 279 (377)
T ss_dssp HHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT
T ss_pred HHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC
Confidence 44455555566777889999999999999 999998754
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-26 Score=210.31 Aligned_cols=213 Identities=15% Similarity=0.047 Sum_probs=160.5
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|+||||||+||||+++++.|++.|++ |++++|++..... ....+++++.+|++|
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~---------------------~~~~~v~~~~~Dl~d 83 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHY---VIASDWKKNEHMT---------------------EDMFCDEFHLVDLRV 83 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCSSSC---------------------GGGTCSEEEECCTTS
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCe---EEEEECCCccchh---------------------hccCCceEEECCCCC
Confidence 5689999999999999999999999987 9999998653210 001478899999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccc----cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCC----
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRF----DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPR---- 194 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~----~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~---- 194 (303)
.+ ++..+++++|+|||+|+.... ..++...+++|+.++.++++++.+. +++||||+||.++....
T Consensus 84 ~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~SS~~v~~~~~~~~ 156 (379)
T 2c5a_A 84 ME------NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIYPEFKQLE 156 (379)
T ss_dssp HH------HHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGSCGGGSSS
T ss_pred HH------HHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeehheeCCCCCCC
Confidence 76 788889999999999997643 3556788999999999999999988 88999999999554321
Q ss_pred ---CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccCh---------HHHHHHHHhhhh-h
Q psy17679 195 ---ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGP---------IGMLVGIATGVL-H 258 (303)
Q Consensus 195 ---~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~---------~~~~~~~~~~~~-~ 258 (303)
.+++|+.. .+..+...|..+|..+|.+++.+....+ ++++||.+.+.... ..++..+..+.. .
T Consensus 157 ~~~~~~~E~~~-~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (379)
T 2c5a_A 157 TTNVSLKESDA-WPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRF 235 (379)
T ss_dssp SSSCEECGGGG-SSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCE
T ss_pred ccCCCcCcccC-CCCCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCce
Confidence 23556542 1333455677888899999987654332 78888755333211 123344444543 4
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.+++.+...++|+|++|+|++++.++.++
T Consensus 236 ~~~g~g~~~~~~i~v~Dva~ai~~~l~~~ 264 (379)
T 2c5a_A 236 EMWGDGLQTRSFTFIDECVEGVLRLTKSD 264 (379)
T ss_dssp EEESCSCCEECCEEHHHHHHHHHHHHHSS
T ss_pred EEeCCCCeeEEEEEHHHHHHHHHHHhhcc
Confidence 45777888999999999999999999865
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-26 Score=204.72 Aligned_cols=203 Identities=19% Similarity=0.154 Sum_probs=152.2
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
||+|||||||||||+++++.|++.| . +++++|....... ....++.++.+|+++
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~---~v~~~~~~~~~~~---------------------~~~~~~~~~~~Dl~~- 54 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-E---IVVIDNLSSGNEE---------------------FVNEAARLVKADLAA- 54 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-C---EEEECCCSSCCGG---------------------GSCTTEEEECCCTTT-
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-C---EEEEEcCCCCChh---------------------hcCCCcEEEECcCCh-
Confidence 3689999999999999999999998 3 5555554322110 012578999999998
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCccc--CCCCccc
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTH--CPRERID 198 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~--~~~~~~~ 198 (303)
+ ++..+++++|+|||+|+.... ..++...+++|+.++.++++++.+. +++||||+||..++ ....+++
T Consensus 55 ~------~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~vyg~~~~~~~~ 127 (313)
T 3ehe_A 55 D------DIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTSTSTVYGEAKVIPTP 127 (313)
T ss_dssp S------CCHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGGCSCSSSSBC
T ss_pred H------HHHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCchHHhCcCCCCCCC
Confidence 5 477888899999999996532 3566788999999999999999998 88999999998444 4445667
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH-------HHHHHHHhh-hhhhccCCCCcc
Q psy17679 199 EEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI-------GMLVGIATG-VLHTHLINLNTV 267 (303)
Q Consensus 199 E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~-------~~~~~~~~~-~~~~~~~~~~~~ 267 (303)
|+.. ..+...|..+|..+|.+++.+...++ +++||+. +|||. .++.....+ ....+++.+.+.
T Consensus 128 E~~~---~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~---v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 201 (313)
T 3ehe_A 128 EDYP---THPISLYGASKLACEALIESYCHTFDMQAWIYRFAN---VIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQN 201 (313)
T ss_dssp TTSC---CCCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSC---EESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCE
T ss_pred CCCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCEEEEeecc---ccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeE
Confidence 7653 34455677888889999988765544 7888864 45553 233444444 333467888899
Q ss_pred ccceehhHHHHHHHHHHh
Q psy17679 268 TDMVPVDLVVNSMISIAW 285 (303)
Q Consensus 268 ~~~i~v~D~a~ai~~~~~ 285 (303)
++|+|++|+|++++.++.
T Consensus 202 ~~~i~v~Dva~a~~~~~~ 219 (313)
T 3ehe_A 202 KSYIYISDCVDAMLFGLR 219 (313)
T ss_dssp ECCEEHHHHHHHHHHHTT
T ss_pred EeEEEHHHHHHHHHHHhc
Confidence 999999999999999998
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.2e-27 Score=200.43 Aligned_cols=212 Identities=12% Similarity=0.009 Sum_probs=153.2
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+|||||||||+|+++++.|++.|++ |++++|++.... ....++.++.+|++|.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~----------------------~~~~~~~~~~~Dl~d~ 58 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFE---VTAVVRHPEKIK----------------------IENEHLKVKKADVSSL 58 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCE---EEEECSCGGGCC----------------------CCCTTEEEECCCTTCH
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCE---EEEEEcCcccch----------------------hccCceEEEEecCCCH
Confidence 479999999999999999999999987 999999864221 1126899999999987
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC-CCccccCCC
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP-RERIDEEFY 202 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~-~~~~~E~~~ 202 (303)
+ ++..+++++|+|||+|+.... ....+++|+.++.++++++.+. +++||||+||.++... .....++
T Consensus 59 ~------~~~~~~~~~d~vi~~a~~~~~---~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~~-- 126 (227)
T 3dhn_A 59 D------EVCEVCKGADAVISAFNPGWN---NPDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGSLFIAPGLRLMD-- 126 (227)
T ss_dssp H------HHHHHHTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTTSEEETTEEGGG--
T ss_pred H------HHHHHhcCCCEEEEeCcCCCC---ChhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhhccCCCCCcccc--
Confidence 6 789999999999999987532 2237788999999999999998 8899999999854321 1222232
Q ss_pred CCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHH
Q psy17679 203 PVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNS 279 (303)
Q Consensus 203 ~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a 279 (303)
.+..+...|..+|...|.+++.+....+ ++++||.+ ||+......+..+....+. . ...++|+|++|+|++
T Consensus 127 -~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v---~g~~~~~~~~~~~~~~~~~-~-~~~~~~i~~~Dva~a 200 (227)
T 3dhn_A 127 -SGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAAD---MRPGVRTGRYRLGKDDMIV-D-IVGNSHISVEDYAAA 200 (227)
T ss_dssp -TTCSCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSE---EESCCCCCCCEEESSBCCC-C-TTSCCEEEHHHHHHH
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcc---cCCCccccceeecCCCccc-C-CCCCcEEeHHHHHHH
Confidence 2334566788888999988888874444 88998754 4443211111112211222 1 223899999999999
Q ss_pred HHHHHhhcccCCcchhhcc
Q psy17679 280 MISIAWSIGESGKVEKAIN 298 (303)
Q Consensus 280 i~~~~~~~~~~~~~~~~~~ 298 (303)
++.++.++...++.+.+.+
T Consensus 201 i~~~l~~~~~~g~~~~~~~ 219 (227)
T 3dhn_A 201 MIDELEHPKHHQERFTIGY 219 (227)
T ss_dssp HHHHHHSCCCCSEEEEEEC
T ss_pred HHHHHhCccccCcEEEEEe
Confidence 9999999987777665543
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-26 Score=206.13 Aligned_cols=213 Identities=11% Similarity=0.071 Sum_probs=151.2
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+|+||||||+||||+++++.|++.|++ |++++|++..... + . ..+++++.+|++|
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~---l------------~------~~~~~~~~~Dl~d 67 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHD---LVLIHRPSSQIQR---L------------A------YLEPECRVAEMLD 67 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECTTSCGGG---G------------G------GGCCEEEECCTTC
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEecChHhhhh---h------------c------cCCeEEEEecCCC
Confidence 3468999999999999999999999987 9999998653210 0 0 0378899999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCC---ccc
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRE---RID 198 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~---~~~ 198 (303)
.+ .+..+++++|+|||+|+.... ..++...+++|+.++.++++++.+. +++||||+||.++..... ..+
T Consensus 68 ~~------~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~~ 140 (342)
T 2x4g_A 68 HA------GLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRHPQGLPGH 140 (342)
T ss_dssp HH------HHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGGSCCCTTSSCBC
T ss_pred HH------HHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHhhCcCCCCCCCC
Confidence 76 788999999999999997553 2455678899999999999999998 889999999996654321 235
Q ss_pred cCCCCCCCC-hhhHHHHHHHHHHHHHHhhCcCCc--EEeecceecCccC----hHHHHHHHHhhhhhhccCCCCccccce
Q psy17679 199 EEFYPVPLK-YENLIQLISETGDEELSEMTPNRV--HISGTGWIDNVYG----PIGMLVGIATGVLHTHLINLNTVTDMV 271 (303)
Q Consensus 199 E~~~~~~~~-~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~i 271 (303)
|+....|.. ....|..+|..+|.+++.+..... ++++||.+.+... ...++..+..+....+ ++..++|+
T Consensus 141 E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i 217 (342)
T 2x4g_A 141 EGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHY---VAGQRNVI 217 (342)
T ss_dssp TTCCCSSCCTTSCHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEE---ECCEEEEE
T ss_pred CCCCCCccccccChHHHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccc---cCCCccee
Confidence 554433310 155677888999999988654322 8899986644332 1234444444443322 56788999
Q ss_pred ehhHHHHHHHHHHhhccc
Q psy17679 272 PVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 272 ~v~D~a~ai~~~~~~~~~ 289 (303)
|++|+|++++.++.++..
T Consensus 218 ~v~Dva~~~~~~~~~~~~ 235 (342)
T 2x4g_A 218 DAAEAGRGLLMALERGRI 235 (342)
T ss_dssp EHHHHHHHHHHHHHHSCT
T ss_pred eHHHHHHHHHHHHhCCCC
Confidence 999999999999987654
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=203.93 Aligned_cols=196 Identities=17% Similarity=0.116 Sum_probs=149.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|++|+||||| +||||++|++.|++.|++ |++++|+.+.. ..+++++.+|++
T Consensus 1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~---V~~~~r~~~~~-------------------------~~~~~~~~~Dl~ 51 (286)
T 3gpi_A 1 MSLSKILIAG-CGDLGLELARRLTAQGHE---VTGLRRSAQPM-------------------------PAGVQTLIADVT 51 (286)
T ss_dssp -CCCCEEEEC-CSHHHHHHHHHHHHTTCC---EEEEECTTSCC-------------------------CTTCCEEECCTT
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHCCCE---EEEEeCCcccc-------------------------ccCCceEEccCC
Confidence 4568999999 599999999999999998 99999986532 268889999999
Q ss_pred CCCCCCCHHHHHHHhcc-ccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCCccc
Q psy17679 122 LPGLGLSETDRATLVKQ-VNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRERID 198 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~-~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~~~~ 198 (303)
|.+ .+..++++ +|+|||+|+... .+....+++|+.++.++++++.+. +++||||+||.++++ ...+++
T Consensus 52 d~~------~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~~~~~ 122 (286)
T 3gpi_A 52 RPD------TLASIVHLRPEILVYCVAASE--YSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVSSTGVYGQEVEEWLD 122 (286)
T ss_dssp CGG------GCTTGGGGCCSEEEECHHHHH--HC-----CCSHHHHHHHHHHTTTS-CCCEEEEEEEGGGCCCCCSSEEC
T ss_pred ChH------HHHHhhcCCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEEcccEEEcCCCCCCCC
Confidence 977 56677776 999999999743 345677889999999999999987 889999999995443 444677
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChH--HHHHHHHhhhhhhccCCCCccccceehhHH
Q psy17679 199 EEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPI--GMLVGIATGVLHTHLINLNTVTDMVPVDLV 276 (303)
Q Consensus 199 E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 276 (303)
|+....|. +.|..+|..+|.+ ... ...+++||+.+ |||. .++..+.. ...++.+...++|+|++|+
T Consensus 123 E~~~~~p~---~~Y~~sK~~~E~~-~~~--~~~~ilR~~~v---~G~~~~~~~~~~~~---~~~~~~~~~~~~~i~v~Dv 190 (286)
T 3gpi_A 123 EDTPPIAK---DFSGKRMLEAEAL-LAA--YSSTILRFSGI---YGPGRLRMIRQAQT---PEQWPARNAWTNRIHRDDG 190 (286)
T ss_dssp TTSCCCCC---SHHHHHHHHHHHH-GGG--SSEEEEEECEE---EBTTBCHHHHHTTC---GGGSCSSBCEECEEEHHHH
T ss_pred CCCCCCCC---ChhhHHHHHHHHH-Hhc--CCeEEEecccc---cCCCchhHHHHHHh---cccCCCcCceeEEEEHHHH
Confidence 77654444 4567788889999 665 23378988754 5554 23344333 2345677889999999999
Q ss_pred HHHHHHHHhhc
Q psy17679 277 VNSMISIAWSI 287 (303)
Q Consensus 277 a~ai~~~~~~~ 287 (303)
|++++.++.++
T Consensus 191 a~~~~~~~~~~ 201 (286)
T 3gpi_A 191 AAFIAYLIQQR 201 (286)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 99999999986
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.7e-26 Score=203.75 Aligned_cols=219 Identities=19% Similarity=0.158 Sum_probs=155.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcC--CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSC--PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g--~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
|++|+||||||+||||+++++.|++.| ++ |++++|....... +.++.+ ....++.++.+|
T Consensus 1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~---V~~~~r~~~~~~~-~~~~~~--------------~~~~~~~~~~~D 62 (336)
T 2hun_A 1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWE---VINIDKLGYGSNP-ANLKDL--------------EDDPRYTFVKGD 62 (336)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHHCTTCE---EEEEECCCTTCCG-GGGTTT--------------TTCTTEEEEECC
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHhCCCCE---EEEEecCcccCch-hHHhhh--------------ccCCceEEEEcC
Confidence 345789999999999999999999997 55 8999987521110 000000 002578999999
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCC-ceEEEEeCCcccC--C
Q psy17679 120 CSLPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDL-KAFVHVSTAFTHC--P 193 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~-~r~i~iSS~~~~~--~ 193 (303)
++|.+ .+..++.++|+|||+||.... ..++...+++|+.++.++++++.+. +. +||||+||.++++ .
T Consensus 63 l~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~ 135 (336)
T 2hun_A 63 VADYE------LVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRE-NPEVRFVHVSTDEVYGDIL 135 (336)
T ss_dssp TTCHH------HHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCCCS
T ss_pred CCCHH------HHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEeccHHHHCCCC
Confidence 99876 688888999999999998643 2355678899999999999999988 54 7999999985433 3
Q ss_pred CCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccCh-----HHHHHHHHhhhhhhccCCCC
Q psy17679 194 RERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGP-----IGMLVGIATGVLHTHLINLN 265 (303)
Q Consensus 194 ~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~ 265 (303)
..+++|+....| ...|..+|..+|.+++.+...++ ++++|+.+.+.... ..++..+..+....+++.+.
T Consensus 136 ~~~~~E~~~~~~---~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (336)
T 2hun_A 136 KGSFTENDRLMP---SSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGK 212 (336)
T ss_dssp SSCBCTTBCCCC---CSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC--
T ss_pred CCCcCCCCCCCC---CCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCC
Confidence 446777654444 45677888889999988765433 78888765333211 12333444455445567778
Q ss_pred ccccceehhHHHHHHHHHHhhcc
Q psy17679 266 TVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 266 ~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..++|+|++|+|++++.++.++.
T Consensus 213 ~~~~~i~v~Dva~~~~~~~~~~~ 235 (336)
T 2hun_A 213 NVRDWLYVEDHVRAIELVLLKGE 235 (336)
T ss_dssp -CEEEEEHHHHHHHHHHHHHHCC
T ss_pred ceeeeEEHHHHHHHHHHHHhCCC
Confidence 88999999999999999997653
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-26 Score=204.68 Aligned_cols=215 Identities=16% Similarity=0.129 Sum_probs=156.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
||+|||||||||||+++++.|++.|++ |++++|...... ...++.+.. ..++.++.+|++|.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~-~~~~~~l~~--------------~~~~~~~~~Dl~d~ 62 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGID---LIVFDNLSRKGA-TDNLHWLSS--------------LGNFEFVHGDIRNK 62 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSTTH-HHHHHHHHT--------------TCCCEEEECCTTCH
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCE---EEEEeCCCccCc-hhhhhhhcc--------------CCceEEEEcCCCCH
Confidence 368999999999999999999999987 999998542211 111222111 14688999999987
Q ss_pred CCCCCHHHHHHHhcc--ccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCc-eEEEEeCCcccCC--CC
Q psy17679 124 GLGLSETDRATLVKQ--VNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLK-AFVHVSTAFTHCP--RE 195 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~--~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~-r~i~iSS~~~~~~--~~ 195 (303)
+ .+..++++ +|+|||+|+.... ..++...+++|+.++.++++++.+. +++ ||||+||.++.+. ..
T Consensus 63 ~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~~SS~~v~g~~~~~ 135 (347)
T 1orr_A 63 N------DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYGDLEQY 135 (347)
T ss_dssp H------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGTTCTTS
T ss_pred H------HHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEeccHHHhCCCCcC
Confidence 6 78888887 9999999997653 2356778999999999999999998 665 9999999955432 21
Q ss_pred c----------------cccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccCh--------HHH
Q psy17679 196 R----------------IDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGP--------IGM 248 (303)
Q Consensus 196 ~----------------~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~--------~~~ 248 (303)
+ ++|+ .|..+...|..+|..+|.+++.+...++ ++++||.+.+.... ..+
T Consensus 136 ~~~e~~~~~~~~~~~~~~~e~---~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~ 212 (347)
T 1orr_A 136 KYNETETRYTCVDKPNGYDES---TQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWF 212 (347)
T ss_dssp CEEECSSCEEETTCTTCBCTT---SCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHH
T ss_pred CcccccccccccccccCcccc---CCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHH
Confidence 2 2232 2334567788899999999988754432 78888765433210 123
Q ss_pred HHHHHhhh-----hhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 249 LVGIATGV-----LHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 249 ~~~~~~~~-----~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
+.....+. +..+++++.+.++|+|++|+|++++.++.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~ 255 (347)
T 1orr_A 213 CQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN 255 (347)
T ss_dssp HHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT
T ss_pred HHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc
Confidence 34444454 345677888999999999999999999875
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-26 Score=204.10 Aligned_cols=210 Identities=14% Similarity=0.089 Sum_probs=155.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhc--CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRS--CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~--g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+|+|||||||||||+++++.|++. |++ |++++|++.... + ..++.++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~~----~-------------------~~~~~~~~~D~~ 55 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTEN---VIASDIRKLNTD----V-------------------VNSGPFEVVNAL 55 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGG---EEEEESCCCSCH----H-------------------HHSSCEEECCTT
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCE---EEEEcCCCcccc----c-------------------cCCCceEEecCC
Confidence 478999999999999999999998 887 999999765321 0 035678999999
Q ss_pred CCCCCCCHHHHHHHhc--cccEEEEcceeccc--cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCC---
Q psy17679 122 LPGLGLSETDRATLVK--QVNIVFHGAATVRF--DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPR--- 194 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~--~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~--- 194 (303)
|.+ ++..+++ ++|+|||+|+.... ..++...+++|+.++.++++++.+. +++||||+||.++....
T Consensus 56 d~~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~ 128 (312)
T 2yy7_A 56 DFN------QIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPSSIAVFGPTTPK 128 (312)
T ss_dssp CHH------HHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCEEGGGCCTTSCS
T ss_pred CHH------HHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHHhCCCCCC
Confidence 876 7888887 89999999997543 2456778899999999999999998 88999999999655432
Q ss_pred CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCcc-ChH--------HHHHHHHhhhhhhccC
Q psy17679 195 ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVY-GPI--------GMLVGIATGVLHTHLI 262 (303)
Q Consensus 195 ~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~-g~~--------~~~~~~~~~~~~~~~~ 262 (303)
.+.+|+.... +...|..+|..+|.+++.+...++ ++++|+.+.+.. +|. ..+.....+....+++
T Consensus 129 ~~~~e~~~~~---~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (312)
T 2yy7_A 129 ENTPQYTIME---PSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFL 205 (312)
T ss_dssp SSBCSSCBCC---CCSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESS
T ss_pred CCccccCcCC---CCchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEec
Confidence 3455554333 345677888889999887754432 778887554321 011 1222333333334567
Q ss_pred CCCccccceehhHHHHHHHHHHhhccc
Q psy17679 263 NLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 263 ~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.++..++|+|++|+|++++.++.++..
T Consensus 206 ~~~~~~~~i~v~Dva~a~~~~~~~~~~ 232 (312)
T 2yy7_A 206 SSETKMPMMYMDDAIDATINIMKAPVE 232 (312)
T ss_dssp CTTCCEEEEEHHHHHHHHHHHHHSCGG
T ss_pred CCCceeeeeeHHHHHHHHHHHHhCccc
Confidence 788899999999999999999987653
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-26 Score=204.22 Aligned_cols=203 Identities=17% Similarity=0.119 Sum_probs=153.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+|||||||||||++|++.|++.|+ +.... ...+.++.+|+
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~---------~~~~~--------------------------~~~~~~~~~D~ 47 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG---------LPGED--------------------------WVFVSSKDADL 47 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC---------CTTCE--------------------------EEECCTTTCCT
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC---------ccccc--------------------------ccccCceeccc
Confidence 36789999999999999999999999987 11100 12444567899
Q ss_pred CCCCCCCCHHHHHHHhcc--ccEEEEcceecc----ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCccc--C
Q psy17679 121 SLPGLGLSETDRATLVKQ--VNIVFHGAATVR----FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTH--C 192 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~--~dvVi~~a~~~~----~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~--~ 192 (303)
+|.+ .+..++++ +|+|||+|+... ...++...+++|+.++.++++++.+. +++||||+||.+++ .
T Consensus 48 ~d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~SS~~vyg~~ 120 (319)
T 4b8w_A 48 TDTA------QTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSCLSTCIFPDK 120 (319)
T ss_dssp TSHH------HHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGGSCSS
T ss_pred CCHH------HHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEcchhhcCCC
Confidence 8876 78888886 999999999864 23456678999999999999999998 89999999999544 3
Q ss_pred CCCccccCCCC-CCCChh-hHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH------------HHHHH----
Q psy17679 193 PRERIDEEFYP-VPLKYE-NLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI------------GMLVG---- 251 (303)
Q Consensus 193 ~~~~~~E~~~~-~~~~~~-~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~------------~~~~~---- 251 (303)
...+++|+... .+..+. ..|..+|..+|.+++.+..... +++||+.+ |||. .++..
T Consensus 121 ~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v---~Gp~~~~~~~~~~~~~~~~~~~~~~ 197 (319)
T 4b8w_A 121 TTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNV---FGPHDNFNIEDGHVLPGLIHKVHLA 197 (319)
T ss_dssp CCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEE---ECTTCCCCTTTSCHHHHHHHHHHHH
T ss_pred CCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccc---cCCCCCCCCccccccHHHHHHHHHH
Confidence 44577777532 122333 3588889999999988755433 78888654 4443 13333
Q ss_pred HHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 252 IATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...+....+++.+...++|+|++|+|++++.++.++.
T Consensus 198 ~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~ 234 (319)
T 4b8w_A 198 KSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYN 234 (319)
T ss_dssp HHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCC
T ss_pred hccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhccc
Confidence 4556666677888999999999999999999999854
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5.1e-26 Score=204.58 Aligned_cols=214 Identities=14% Similarity=0.090 Sum_probs=158.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
|+|||||||||||+++++.|++. |++ |++++|++..... + ....++.++.+|+++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~---V~~~~r~~~~~~~------~--------------~~~~~~~~~~~D~~~~ 57 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYE---VYGLDIGSDAISR------F--------------LNHPHFHFVEGDISIH 57 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCE---EEEEESCCGGGGG------G--------------TTCTTEEEEECCTTTC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCE---EEEEeCCcchHHH------h--------------hcCCCeEEEeccccCc
Confidence 58999999999999999999998 787 9999997643210 0 0025789999999985
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCCccc
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRERID 198 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~~~~ 198 (303)
. ..+..+++++|+|||+||.... ..++...+++|+.++.++++++.+. + +||||+||.++.+ ...+++
T Consensus 58 ~-----~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS~~v~g~~~~~~~~ 130 (345)
T 2bll_A 58 S-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSDKYFD 130 (345)
T ss_dssp S-----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCCSSBC
T ss_pred H-----HHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecHHHcCCCCCCCcC
Confidence 4 1467788899999999997542 2456678899999999999999997 6 8999999985443 334566
Q ss_pred cCCCC---CCC-ChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccCh-------------HHHHHHHHhhhhh
Q psy17679 199 EEFYP---VPL-KYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGP-------------IGMLVGIATGVLH 258 (303)
Q Consensus 199 E~~~~---~~~-~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~-------------~~~~~~~~~~~~~ 258 (303)
|+... .|. .+...|..+|..+|.+++.+....+ ++++|+.+.+.... ..++.....+...
T Consensus 131 e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (345)
T 2bll_A 131 EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPI 210 (345)
T ss_dssp TTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCE
T ss_pred CcccccccCcccCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCc
Confidence 76543 122 3556788999999999987654322 78888755332210 1234445556555
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+++.+.+.++|+|++|+|++++.++.++.
T Consensus 211 ~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~ 240 (345)
T 2bll_A 211 KLIDGGKQKRCFTDIRDGIEALYRIIENAG 240 (345)
T ss_dssp EEGGGSCCEEECEEHHHHHHHHHHHHHCGG
T ss_pred EEECCCCEEEEEEEHHHHHHHHHHHHhhcc
Confidence 567778889999999999999999998764
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-25 Score=201.22 Aligned_cols=218 Identities=16% Similarity=0.106 Sum_probs=156.6
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc-------ccHHHHHHHHHHhHHHhhhhccCcCcCCceEEE
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG-------KDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAV 116 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~-------~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~ 116 (303)
+|+||||||+||||+++++.|++.|++ |++++|.... ....+.+..+. ..++.++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~ 63 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYL---PVVIDNFHNAFRGGGSLPESLRRVQELT---------------GRSVEFE 63 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCC---EEEEECSSSSCBCSSSSBHHHHHHHHHH---------------TCCCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEecCCcccccccccHHHHHHHHhcc---------------CCceEEE
Confidence 478999999999999999999999988 8899886543 12222221110 1578899
Q ss_pred EecCCCCCCCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCccc
Q psy17679 117 AGDCSLPGLGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTH 191 (303)
Q Consensus 117 ~~Dl~d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~ 191 (303)
.+|++|.+ ++..+++ ++|+|||+|+.... ..++...+++|+.++.++++++.+. +++||||+||.++.
T Consensus 64 ~~D~~~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~ 136 (348)
T 1ek6_A 64 EMDILDQG------ALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATVY 136 (348)
T ss_dssp ECCTTCHH------HHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGG
T ss_pred ECCCCCHH------HHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEEECcHHHh
Confidence 99999876 6788887 89999999997643 2456678899999999999999987 88999999999554
Q ss_pred C--CCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC--c--EEeecceecCc-----cCh------HHHH---HH
Q psy17679 192 C--PRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR--V--HISGTGWIDNV-----YGP------IGML---VG 251 (303)
Q Consensus 192 ~--~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~--~--~ii~pg~~~~~-----~g~------~~~~---~~ 251 (303)
. ...+++|+....| ....|..+|..+|.+++.+.... . +++||+.+.+. +|+ ..++ ..
T Consensus 137 g~~~~~~~~E~~~~~p--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~ 214 (348)
T 1ek6_A 137 GNPQYLPLDEAHPTGG--CTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQ 214 (348)
T ss_dssp CSCSSSSBCTTSCCCC--CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHH
T ss_pred CCCCCCCcCCCCCCCC--CCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHH
Confidence 3 3446777754444 14567788888999998775322 2 78888655332 121 1122 22
Q ss_pred HHh--hhhhhccC------CCCccccceehhHHHHHHHHHHhhcc
Q psy17679 252 IAT--GVLHTHLI------NLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 252 ~~~--~~~~~~~~------~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
... +....+++ .+...++|||++|+|++++.++.++.
T Consensus 215 ~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~ 259 (348)
T 1ek6_A 215 VAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLK 259 (348)
T ss_dssp HHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhccc
Confidence 222 22233444 56788999999999999999998763
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-26 Score=211.07 Aligned_cols=228 Identities=14% Similarity=0.071 Sum_probs=158.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccH--------------HHHHHHHHHhHHHhhhhccCc
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDI--------------QERLDAIFEDRLFWRLRAEVP 107 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~--------------~~~l~~l~~~~~~~~~~~~~~ 107 (303)
..+++|||||||||||+++++.|++.|++ |++++|....... .+.+..+.. +
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~----- 74 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKKNYE---VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA------L----- 74 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHH------H-----
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhCCCe---EEEEEecCccccccccccccccccchhhhhhhhHhh------c-----
Confidence 45689999999999999999999999987 8899885321100 111111110 0
Q ss_pred CcCCceEEEEecCCCCCCCCCHHHHHHHhcc--ccEEEEcceecccc---ccH---HHHHhhhHHHHHHHHHHHHhcCCC
Q psy17679 108 DFRSKVSAVAGDCSLPGLGLSETDRATLVKQ--VNIVFHGAATVRFD---EHI---KMAVKINVCGVQAMLQLAREMKDL 179 (303)
Q Consensus 108 ~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~--~dvVi~~a~~~~~~---~~~---~~~~~~N~~~~~~ll~~a~~~~~~ 179 (303)
...++.++.+|+++.+ .+..++++ +|+|||+||..... .+. ...+++|+.++.++++++.+. ++
T Consensus 75 -~~~~v~~~~~Dl~d~~------~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~ 146 (404)
T 1i24_A 75 -TGKSIELYVGDICDFE------FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-GE 146 (404)
T ss_dssp -HCCCCEEEESCTTSHH------HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-CT
T ss_pred -cCCceEEEECCCCCHH------HHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh-CC
Confidence 0157889999999876 67888886 99999999975421 122 247789999999999999988 66
Q ss_pred -ceEEEEeCCcccCCC-CccccCCC-----------CCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCcc
Q psy17679 180 -KAFVHVSTAFTHCPR-ERIDEEFY-----------PVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVY 243 (303)
Q Consensus 180 -~r~i~iSS~~~~~~~-~~~~E~~~-----------~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~ 243 (303)
+||||+||.++.+.. .+++|+.+ ..+..+...|..+|..+|.+++.+...++ ++++||.+.+..
T Consensus 147 ~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~ 226 (404)
T 1i24_A 147 ECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVK 226 (404)
T ss_dssp TCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSC
T ss_pred CcEEEEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCC
Confidence 599999999554322 34555411 12344556788889989999887654322 788887654332
Q ss_pred Ch----------------------HHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcccCC
Q psy17679 244 GP----------------------IGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGESG 291 (303)
Q Consensus 244 g~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~ 291 (303)
.. ..++..+..+....+++.+.+.++|||++|+|++++.++.++...+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g 296 (404)
T 1i24_A 227 TDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAG 296 (404)
T ss_dssp CTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTT
T ss_pred CCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCC
Confidence 10 1244455556555567888889999999999999999998765433
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=214.85 Aligned_cols=237 Identities=17% Similarity=0.130 Sum_probs=163.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+.+|+|||||||||||++++++|++.|++ |++++|++......+++.+.+.......... ....++.++.+|++
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~---~~~~~v~~v~~Dl~ 140 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHR---IYCFIRADNEEIAWYKLMTNLNDYFSEETVE---MMLSNIEVIVGDFE 140 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEE---EEEEEECSSHHHHHHHHHHHHHHHSCHHHHH---HHHTTEEEEEECC-
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCE---EEEEECCCChHHHHHHHHHHHHHhccccccc---cccCceEEEeCCCC
Confidence 45679999999999999999999888877 9999999875555555544433211000000 01268999999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC-------CC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC-------PR 194 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~-------~~ 194 (303)
+.+ .+. .+.++|+|||+||......++...+++|+.++.+++++|.+ +.++|||+||.++ + ..
T Consensus 141 d~~------~l~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~~~~~~~~~ 210 (427)
T 4f6c_A 141 CMD------DVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTED 210 (427)
T ss_dssp --C------CCC-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GSEECSSCSC
T ss_pred Ccc------cCC-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CCCccCCCCC
Confidence 965 223 66799999999998877777788999999999999999998 6789999999977 2 23
Q ss_pred CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc--EEeecceecCccChH------------HHHHHHHhhhhhhc
Q psy17679 195 ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV--HISGTGWIDNVYGPI------------GMLVGIATGVLHTH 260 (303)
Q Consensus 195 ~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~~~~~g~~------------~~~~~~~~~~~~~~ 260 (303)
.+++|++...+..+...|..+|+.+|.+++.+..... +++|||.+.+..... .++.....+.....
T Consensus 211 ~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (427)
T 4f6c_A 211 VTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV 290 (427)
T ss_dssp CEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH
T ss_pred ccccccccccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC
Confidence 4677777655555778899999999999998754333 899998664433211 22222222222111
Q ss_pred cCCCCccccceehhHHHHHHHHHHhhcccCCcchhh
Q psy17679 261 LINLNTVTDMVPVDLVVNSMISIAWSIGESGKVEKA 296 (303)
Q Consensus 261 ~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~~~~ 296 (303)
+.++..++|++++|+|++++.++..+. .+.++.+
T Consensus 291 -~~~~~~~~~v~v~DvA~ai~~~~~~~~-~g~~~~l 324 (427)
T 4f6c_A 291 -SMAEMPVDFSFVDTTARQIVALAQVNT-PQIIYHV 324 (427)
T ss_dssp -HHHTCEECCEEHHHHHHHHHHHTTSCC-CCSEEEE
T ss_pred -ccccceEEEeeHHHHHHHHHHHHcCCC-CCCEEEe
Confidence 235788999999999999999998776 4444433
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.4e-27 Score=221.39 Aligned_cols=278 Identities=15% Similarity=0.122 Sum_probs=165.1
Q ss_pred CccccccccCCCChHHHhcccCCCCCCCCCCCC--CC------------CccccccCCcEEEEeCCcchhHHHHHHHHHh
Q psy17679 1 PWTDIVNSKYFTDPLELLGEKSFGSPDDIPDDE--IG------------TPMQEFYRDKTIFLTGGTGFMGKTVVEKLLR 66 (303)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------------~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~ 66 (303)
|+.++.+.++...++..+.+....+.+. +++. +. ........+|+|||||||||||++|+++|++
T Consensus 94 ~~~~~~~~~t~~~la~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VLVTGatG~iG~~l~~~L~~ 172 (508)
T 4f6l_B 94 SMQTLYQYKTVRQIVNYMYQNQQSLVAL-PDNLSELQKIVMSRYNLGILEDSLSHRPLGNTLLTGATGFLGAYLIEALQG 172 (508)
T ss_dssp -------------------------CCC-CSTHHHHHHHHHHHHTTCCCSTTSCBCCCEEEEESCTTSHHHHHHHHHTBT
T ss_pred cHHHHhcCCcHHHHHHHHHhhccccccc-hhhhHHHHHHhhhcccccccccccccCCCCeEEEECCccchHHHHHHHHHh
Confidence 3456777777777777765544322111 1110 00 0011123358999999999999999999988
Q ss_pred cCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcc
Q psy17679 67 SCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGA 146 (303)
Q Consensus 67 ~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a 146 (303)
.|++ |++++|+........++.+.+.......... ....+++++.+|+++.+ .+. +..++|+|||+|
T Consensus 173 ~g~~---V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~---~~~~~v~~v~~Dl~d~~------~l~-~~~~~D~Vih~A 239 (508)
T 4f6l_B 173 YSHR---IYCFIRADNEEIAWYKLMTNLNDYFSEETVE---MMLSNIEVIVGDFECMD------DVV-LPENMDTIIHAG 239 (508)
T ss_dssp TEEE---EEEEEESSSHHHHHHHHHHHHHHHSCHHHHH---HHSTTEEEEEEBTTBCS------SCC-CSSCCSEEEECC
T ss_pred cCCE---EEEEECCCChHHHHHHHHHHHHHhcccccch---hccCceEEEecCCcccc------cCC-CccCCCEEEECC
Confidence 8876 9999999875545555544332210000000 11268999999999955 122 667999999999
Q ss_pred eeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcc--c----CCCCccccCCCCCCCChhhHHHHHHHHHH
Q psy17679 147 ATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFT--H----CPRERIDEEFYPVPLKYENLIQLISETGD 220 (303)
Q Consensus 147 ~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~--~----~~~~~~~E~~~~~~~~~~~~~~~~k~~~E 220 (303)
+......++...+++|+.++.+++++|.+ +.++|||+||.++ . ....+++|++...+..+...|..+|+.+|
T Consensus 240 a~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E 317 (508)
T 4f6l_B 240 ARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSE 317 (508)
T ss_dssp CC--------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHH
T ss_pred ceecCCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhhccCCccCCcCcccccccccccccCCCcHHHHHHHHH
Confidence 99877777788889999999999999998 5689999999977 1 12346777766544557788999999999
Q ss_pred HHHHhhCcCCc--EEeecceecCccChH--------HHHHHHHhh----hhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 221 EELSEMTPNRV--HISGTGWIDNVYGPI--------GMLVGIATG----VLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 221 ~~~~~~~~~~~--~ii~pg~~~~~~g~~--------~~~~~~~~~----~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
.+++.+..... +++|||.+.+..... ..+..++.. .... .+.++..++|+|++|+|++++.++.+
T Consensus 318 ~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~g~~~~~~v~v~DvA~ai~~~~~~ 396 (508)
T 4f6l_B 318 LKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFVDTTARQIVALAQV 396 (508)
T ss_dssp HHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEE-TTGGGSEEECEEHHHHHHHHHHHTTB
T ss_pred HHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCC-CCccCceEEEEcHHHHHHHHHHHHhC
Confidence 99998765433 899987664332211 112222222 2111 12357889999999999999999987
Q ss_pred cccCCcchhh
Q psy17679 287 IGESGKVEKA 296 (303)
Q Consensus 287 ~~~~~~~~~~ 296 (303)
+. .+.++++
T Consensus 397 ~~-~~~~~nl 405 (508)
T 4f6l_B 397 NT-PQIIYHV 405 (508)
T ss_dssp CC-SCSEEEE
T ss_pred CC-CCCEEEe
Confidence 76 4444443
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.9e-26 Score=201.24 Aligned_cols=209 Identities=14% Similarity=0.049 Sum_probs=155.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
-..|+||||||+||||+++++.|++.|++ |++++|++.. . . .++.++.+|++
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~-~----------------------~--l~~~~~~~Dl~ 61 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVE---VFGTSRNNEA-K----------------------L--PNVEMISLDIM 61 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCTTC-C----------------------C--TTEEEEECCTT
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCE---EEEEecCCcc-c----------------------c--ceeeEEECCCC
Confidence 34589999999999999999999999987 9999997642 1 0 16789999999
Q ss_pred CCCCCCCHHHHHHHhcc--ccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC----
Q psy17679 122 LPGLGLSETDRATLVKQ--VNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC---- 192 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~--~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~---- 192 (303)
|.+ .+..++++ +|+|||+||.... ..++...+++|+.++.++++++...++++||||+||.++.+
T Consensus 62 d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~ 135 (321)
T 2pk3_A 62 DSQ------RVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILP 135 (321)
T ss_dssp CHH------HHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCG
T ss_pred CHH------HHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCC
Confidence 876 67888875 9999999998653 23567889999999999999997753589999999995543
Q ss_pred CCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH-----HHHHHHHh---h--hhhh
Q psy17679 193 PRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI-----GMLVGIAT---G--VLHT 259 (303)
Q Consensus 193 ~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~-----~~~~~~~~---~--~~~~ 259 (303)
...+++|+.... +...|..+|..+|.+++.+...++ ++++|+.+.+..... .++..+.. + ....
T Consensus 136 ~~~~~~E~~~~~---~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 212 (321)
T 2pk3_A 136 EESPVSEENQLR---PMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPII 212 (321)
T ss_dssp GGCSBCTTSCCB---CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEE
T ss_pred CCCCCCCCCCCC---CCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeE
Confidence 234677765433 445677888889999988754322 788887553322211 12333333 3 2334
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+++.+...++|+|++|+|++++.++.++
T Consensus 213 ~~~~~~~~~~~v~v~Dva~a~~~~~~~~ 240 (321)
T 2pk3_A 213 KVGNLEAVRDFTDVRDIVQAYWLLSQYG 240 (321)
T ss_dssp EESCSSCEEEEEEHHHHHHHHHHHHHHC
T ss_pred EeCCCCcEEeeEEHHHHHHHHHHHHhCC
Confidence 5677788899999999999999999876
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-25 Score=201.60 Aligned_cols=216 Identities=19% Similarity=0.140 Sum_probs=157.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhc---C---CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRS---C---PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~---g---~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
|+|||||||||||+++++.|++. | ++ |++++|....... +.++. + ....++.++.+
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~---V~~~~r~~~~~~~-~~~~~---------~-----~~~~~~~~~~~ 62 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADE---VIVLDSLTYAGNR-ANLAP---------V-----DADPRLRFVHG 62 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSE---EEEEECCCTTCCG-GGGGG---------G-----TTCTTEEEEEC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceE---EEEEECCCccCch-hhhhh---------c-----ccCCCeEEEEc
Confidence 57999999999999999999996 6 65 9999996531110 00000 0 00257899999
Q ss_pred cCCCCCCCCCHHHHHHHhccccEEEEcceecccc---ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--C
Q psy17679 119 DCSLPGLGLSETDRATLVKQVNIVFHGAATVRFD---EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--P 193 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~---~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~ 193 (303)
|++|.+ .+..++.++|+|||+|+..... .++...+++|+.++.++++++.+. +++||||+||.++++ .
T Consensus 63 Dl~d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS~~vyg~~~ 135 (337)
T 1r6d_A 63 DIRDAG------LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGSID 135 (337)
T ss_dssp CTTCHH------HHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGCCCS
T ss_pred CCCCHH------HHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecchHHhCCCC
Confidence 999876 7888889999999999976432 345678899999999999999998 889999999985443 3
Q ss_pred CCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccCh-----HHHHHHHHhhhhhhccCCCC
Q psy17679 194 RERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGP-----IGMLVGIATGVLHTHLINLN 265 (303)
Q Consensus 194 ~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~ 265 (303)
..+++|+.... +...|..+|..+|.+++.+...++ ++++|+.+.+.... ..++.....+....+++.+.
T Consensus 136 ~~~~~E~~~~~---~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (337)
T 1r6d_A 136 SGSWTESSPLE---PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGA 212 (337)
T ss_dssp SSCBCTTSCCC---CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSC
T ss_pred CCCCCCCCCCC---CCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCC
Confidence 34567765433 345677888889999887654322 78888755333211 12334444555445667788
Q ss_pred ccccceehhHHHHHHHHHHhhcc
Q psy17679 266 TVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 266 ~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..++|+|++|+|++++.++.++.
T Consensus 213 ~~~~~i~v~Dva~a~~~~~~~~~ 235 (337)
T 1r6d_A 213 NVREWVHTDDHCRGIALVLAGGR 235 (337)
T ss_dssp CEEEEEEHHHHHHHHHHHHHHCC
T ss_pred eeEeeEeHHHHHHHHHHHHhCCC
Confidence 88999999999999999998653
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=202.07 Aligned_cols=217 Identities=18% Similarity=0.072 Sum_probs=156.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
...+|+||||||+||||+++++.|++.|++ |++++|++..... ..++.+. ...++.++.+|+
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~-~~~~~~~--------------~~~~~~~~~~Dl 72 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKGYR---VHGLVARRSSDTR-WRLRELG--------------IEGDIQYEDGDM 72 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCCC-HHHHHTT--------------CGGGEEEEECCT
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCCCe---EEEEeCCCccccc-cchhhcc--------------ccCceEEEECCC
Confidence 345689999999999999999999999987 9999998653210 1111110 015788999999
Q ss_pred CCCCCCCCHHHHHHHhcc--ccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCC-ceEEEEeCCcccC--
Q psy17679 121 SLPGLGLSETDRATLVKQ--VNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDL-KAFVHVSTAFTHC-- 192 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~--~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~-~r~i~iSS~~~~~-- 192 (303)
+|.+ .+..++++ +|+|||+|+.... ..++...+++|+.++.++++++.+. ++ +||||+||.++++
T Consensus 73 ~d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~v~g~~ 145 (335)
T 1rpn_A 73 ADAC------SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSEMFGLI 145 (335)
T ss_dssp TCHH------HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCSC
T ss_pred CCHH------HHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeCHHHhCCC
Confidence 9876 67888874 6999999997653 3456788899999999999999998 75 8999999995543
Q ss_pred CCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH-----------HHHHHHHhhhhh
Q psy17679 193 PRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI-----------GMLVGIATGVLH 258 (303)
Q Consensus 193 ~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~-----------~~~~~~~~~~~~ 258 (303)
...+++|+....| ...|..+|..+|.+++.+...+. ++++|+ ++|||. .++.....+...
T Consensus 146 ~~~~~~E~~~~~p---~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~---~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~ 219 (335)
T 1rpn_A 146 QAERQDENTPFYP---RSPYGVAKLYGHWITVNYRESFGLHASSGILF---NHESPLRGIEFVTRKVTDAVARIKLGKQQ 219 (335)
T ss_dssp SSSSBCTTSCCCC---CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC---CEECTTSCTTSHHHHHHHHHHHHHTTSCS
T ss_pred CCCCCCcccCCCC---CChhHHHHHHHHHHHHHHHHHcCCcEEEEeeC---cccCCCCCCCcchHHHHHHHHHHHcCCCc
Confidence 3346777755444 44677788889999988754432 566664 455542 122233334322
Q ss_pred -hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 -THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 -~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..++.++..++|+|++|+|++++.++.++.
T Consensus 220 ~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~ 250 (335)
T 1rpn_A 220 ELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK 250 (335)
T ss_dssp CEEESCTTCEEECEEHHHHHHHHHHHHHSSS
T ss_pred eEEeCCCcceeceEEHHHHHHHHHHHHhcCC
Confidence 246778899999999999999999998764
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=202.10 Aligned_cols=214 Identities=20% Similarity=0.165 Sum_probs=157.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhc--CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRS--CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~--g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+|+||||||+||||+++++.|++. |++ |++++|....... +.+ ... ...++.++.+|++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~~~-~~~------------~~~---~~~~~~~~~~Dl~ 64 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVH---VTVLDKLTYAGNK-ANL------------EAI---LGDRVELVVGDIA 64 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCE---EEEEECCCTTCCG-GGT------------GGG---CSSSEEEEECCTT
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCE---EEEEeCCCCCCCh-hHH------------hhh---ccCCeEEEECCCC
Confidence 479999999999999999999999 676 9999997531110 000 000 0157899999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCC----
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPR---- 194 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~---- 194 (303)
|.+ .+..+++++|+|||+|+.... ..++...+++|+.++.++++++.+. ++ ||||+||.++++..
T Consensus 65 d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS~~vyg~~~~~~ 136 (348)
T 1oc2_A 65 DAE------LVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVSTDEVYGDLPLRE 136 (348)
T ss_dssp CHH------HHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGGCCBCCGG
T ss_pred CHH------HHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecccceeCCCcccc
Confidence 876 788999999999999998643 2345678899999999999999998 66 99999998543321
Q ss_pred ----------CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccCh-----HHHHHHHHhhh
Q psy17679 195 ----------ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGP-----IGMLVGIATGV 256 (303)
Q Consensus 195 ----------~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~-----~~~~~~~~~~~ 256 (303)
.+++|+.... +...|..+|..+|.+++.+...++ ++++||.+.+.... ..++.....+.
T Consensus 137 ~~~~~~~~~~~~~~E~~~~~---~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~ 213 (348)
T 1oc2_A 137 DLPGHGEGPGEKFTAETNYN---PSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGI 213 (348)
T ss_dssp GSTTTTCSTTSSBCTTSCCC---CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTC
T ss_pred cccccccccCCCcCCCCCCC---CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCC
Confidence 4566664433 445677888889999987754433 78888755332211 12334444555
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...+++.+...++|+|++|+|++++.++..+
T Consensus 214 ~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~ 244 (348)
T 1oc2_A 214 KPKLYGEGKNVRDWIHTNDHSTGVWAILTKG 244 (348)
T ss_dssp CCEEETTSCCEEECEEHHHHHHHHHHHHHHC
T ss_pred CceEecCCCceEeeEEHHHHHHHHHHHhhCC
Confidence 5556677888999999999999999999765
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-25 Score=199.02 Aligned_cols=211 Identities=18% Similarity=0.186 Sum_probs=155.6
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
||+||||||+||||+++++.|++.|++ |++++|...... + ....++.++.+|+++.
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~--~-------------------~~~~~~~~~~~D~~~~ 56 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLS---VVVVDNLQTGHE--D-------------------AITEGAKFYNGDLRDK 56 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCG--G-------------------GSCTTSEEEECCTTCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCE---EEEEeCCCcCch--h-------------------hcCCCcEEEECCCCCH
Confidence 478999999999999999999999987 889998754221 0 0013788999999987
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCCc
Q psy17679 124 GLGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRER 196 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~~ 196 (303)
+ .+..+++ ++|+|||+|+.... ..++...+++|+.++.++++++.+. +++||||+||.++.. ...+
T Consensus 57 ~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~~~~~~ 129 (330)
T 2c20_A 57 A------FLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSSTAATYGEVDVDL 129 (330)
T ss_dssp H------HHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGGCSCSSSS
T ss_pred H------HHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeCCceeeCCCCCCC
Confidence 6 6888888 89999999997643 2356778899999999999999988 889999999995543 3346
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCcc-----Ch-----HHHH---HHHHhhh--hh
Q psy17679 197 IDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVY-----GP-----IGML---VGIATGV--LH 258 (303)
Q Consensus 197 ~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~-----g~-----~~~~---~~~~~~~--~~ 258 (303)
++|+....| ...|..+|..+|.+++.+...++ +++||+.+.+.. |+ ..++ .....+. ..
T Consensus 130 ~~E~~~~~~---~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 206 (330)
T 2c20_A 130 ITEETMTNP---TNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKI 206 (330)
T ss_dssp BCTTSCCCC---SSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCE
T ss_pred CCcCCCCCC---CChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCe
Confidence 777754443 45677888889999988765433 788887554331 11 1122 2222222 22
Q ss_pred hccC------CCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLI------NLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~------~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+++ .++..++|+|++|+|++++.++.++.
T Consensus 207 ~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~ 242 (330)
T 2c20_A 207 MMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQ 242 (330)
T ss_dssp EEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHH
T ss_pred EEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccc
Confidence 3444 56788999999999999999998764
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=200.06 Aligned_cols=203 Identities=10% Similarity=0.045 Sum_probs=151.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|++|+||||||+||||+++++.|++.|++ |+++.|+. .+|+.
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~---v~~~~r~~-----------------------------------~~D~~ 42 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDV---ELVLRTRD-----------------------------------ELNLL 42 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTE---EEECCCTT-----------------------------------TCCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCe---EEEEecCc-----------------------------------cCCcc
Confidence 34689999999999999999999999987 87877641 26887
Q ss_pred CCCCCCCHHHHHHHhc--cccEEEEcceeccc----cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--C
Q psy17679 122 LPGLGLSETDRATLVK--QVNIVFHGAATVRF----DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--P 193 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~----~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~ 193 (303)
|.+ .+..+++ ++|+|||+|+.... ..++...+++|+.++.++++++.+. +++||||+||.++++ .
T Consensus 43 d~~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~vyg~~~ 115 (321)
T 1e6u_A 43 DSR------AVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLA 115 (321)
T ss_dssp CHH------HHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTC
T ss_pred CHH------HHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHHHcCCCC
Confidence 765 6888888 89999999997642 3456778899999999999999998 889999999995543 3
Q ss_pred CCccccCCCCC-CCCh-hhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccCh---------HHHHHHHHhh----
Q psy17679 194 RERIDEEFYPV-PLKY-ENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGP---------IGMLVGIATG---- 255 (303)
Q Consensus 194 ~~~~~E~~~~~-~~~~-~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~---------~~~~~~~~~~---- 255 (303)
..+++|+.... +..+ ...|..+|..+|.+++.+..... +++||+.+.+.... ..++..+..+
T Consensus 116 ~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g 195 (321)
T 1e6u_A 116 KQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQK 195 (321)
T ss_dssp CSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHT
T ss_pred CCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcC
Confidence 44677765321 3334 35788999999999988754322 78888765433221 1233333332
Q ss_pred -hhhhccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 256 -VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 256 -~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
....+++.++..++|||++|+|++++.++.++..
T Consensus 196 ~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~ 230 (321)
T 1e6u_A 196 APDVVVWGSGTPMREFLHVDDMAAASIHVMELAHE 230 (321)
T ss_dssp CSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHH
T ss_pred CCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCccc
Confidence 2334577788999999999999999999987643
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-25 Score=201.39 Aligned_cols=217 Identities=15% Similarity=0.043 Sum_probs=156.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+||||||+||||++++++|++.|++ |++++|++........ .+ ....++.++.+|+
T Consensus 6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~--~~--------------~~~~~~~~~~~Dl 66 (357)
T 1rkx_A 6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGAT---VKGYSLTAPTVPSLFE--TA--------------RVADGMQSEIGDI 66 (357)
T ss_dssp HHTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCSSSSCHHH--HT--------------TTTTTSEEEECCT
T ss_pred hhCCCEEEEECCCchHHHHHHHHHHhCCCe---EEEEeCCCcccchhhH--hh--------------ccCCceEEEEccc
Confidence 366789999999999999999999999987 9999998654321110 00 0025788999999
Q ss_pred CCCCCCCCHHHHHHHhcc--ccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCC-
Q psy17679 121 SLPGLGLSETDRATLVKQ--VNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPR- 194 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~--~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~- 194 (303)
++.+ .+..++++ +|+|||+||.... ...+...+++|+.++.++++++.+.+.++||||+||.++++..
T Consensus 67 ~d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~ 140 (357)
T 1rkx_A 67 RDQN------KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKE 140 (357)
T ss_dssp TCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCC
T ss_pred cCHH------HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCC
Confidence 9876 67888875 8999999996432 3455678899999999999999987338999999999655432
Q ss_pred --CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----------c--EEeecceecCccCh------HHHHHHHHh
Q psy17679 195 --ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----------V--HISGTGWIDNVYGP------IGMLVGIAT 254 (303)
Q Consensus 195 --~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----------~--~ii~pg~~~~~~g~------~~~~~~~~~ 254 (303)
.++.|+.... +...|..+|..+|.+++.+...+ . ++++||.+.+.... ..++..+..
T Consensus 141 ~~~~~~E~~~~~---~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~ 217 (357)
T 1rkx_A 141 WIWGYRENEAMG---GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQ 217 (357)
T ss_dssp SSSCBCTTSCBC---CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHT
T ss_pred cCCCCCCCCCCC---CCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhc
Confidence 2455654333 44567788888999988775432 2 78888755332210 123333344
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
+....+ +.+...++|+|++|+|++++.++..
T Consensus 218 g~~~~~-~~~~~~~~~v~v~Dva~a~~~~~~~ 248 (357)
T 1rkx_A 218 SQPVII-RNPHAIRPWQHVLEPLSGYLLLAQK 248 (357)
T ss_dssp TCCEEC-SCTTCEECCEETHHHHHHHHHHHHH
T ss_pred CCCEEE-CCCCCeeccEeHHHHHHHHHHHHHh
Confidence 544333 3567889999999999999999875
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-25 Score=193.86 Aligned_cols=193 Identities=14% Similarity=0.108 Sum_probs=153.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|++|+||||||+|+||+++++.|++.|+. |++++|++.... ..++.++.+|++
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G~~---V~~~~r~~~~~~------------------------~~~~~~~~~Dl~ 53 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMAEI---LRLADLSPLDPA------------------------GPNEECVQCDLA 53 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGEEE---EEEEESSCCCCC------------------------CTTEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcCCE---EEEEecCCcccc------------------------CCCCEEEEcCCC
Confidence 35689999999999999999999999987 999999865321 268899999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC---CCCccc
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC---PRERID 198 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~---~~~~~~ 198 (303)
|.+ ++..+++++|+||||||.. ...+++..+++|+.++.++++++.+. +.+|||++||..+.. ...+++
T Consensus 54 d~~------~~~~~~~~~D~vi~~Ag~~-~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~g~~~~~~~~~ 125 (267)
T 3rft_A 54 DAN------AVNAMVAGCDGIVHLGGIS-VEKPFEQILQGNIIGLYNLYEAARAH-GQPRIVFASSNHTIGYYPQTERLG 125 (267)
T ss_dssp CHH------HHHHHHTTCSEEEECCSCC-SCCCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGTTSBTTSCBC
T ss_pred CHH------HHHHHHcCCCEEEECCCCc-CcCCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcchHHhCCCCCCCCCC
Confidence 876 7899999999999999984 44567889999999999999999988 889999999985542 334566
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhH
Q psy17679 199 EEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDL 275 (303)
Q Consensus 199 E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 275 (303)
|+.. ..+...|..+|...|.+++.+...++ ++++||.+ +++ +..+....+|++++|
T Consensus 126 e~~~---~~~~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v---~~~---------------~~~~~~~~~~~~~~d 184 (267)
T 3rft_A 126 PDVP---ARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSC---TPE---------------PNNYRMLSTWFSHDD 184 (267)
T ss_dssp TTSC---CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBC---SSS---------------CCSTTHHHHBCCHHH
T ss_pred CCCC---CCCCChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecc---cCC---------------CCCCCceeeEEcHHH
Confidence 6543 34455677888889999987764443 68888754 432 234566778999999
Q ss_pred HHHHHHHHHhhcccC
Q psy17679 276 VVNSMISIAWSIGES 290 (303)
Q Consensus 276 ~a~ai~~~~~~~~~~ 290 (303)
+++++..++..+...
T Consensus 185 ~a~~~~~~~~~~~~~ 199 (267)
T 3rft_A 185 FVSLIEAVFRAPVLG 199 (267)
T ss_dssp HHHHHHHHHHCSCCC
T ss_pred HHHHHHHHHhCCCCC
Confidence 999999999876543
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-25 Score=201.18 Aligned_cols=216 Identities=18% Similarity=0.072 Sum_probs=153.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|++|+||||||+||||+++++.|++.|++ |++++|++..... ..++.+. ...++.++.+|++
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~~~~-~~~~~~~--------------~~~~~~~~~~Dl~ 62 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYE---VYGADRRSGEFAS-WRLKELG--------------IENDVKIIHMDLL 62 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECSCCSTTTT-HHHHHTT--------------CTTTEEECCCCTT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEECCCccccc-ccHhhcc--------------ccCceeEEECCCC
Confidence 35689999999999999999999999987 9999998654321 1111110 0147889999999
Q ss_pred CCCCCCCHHHHHHHhcc--ccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCC-ceEEEEeCCccc--CC
Q psy17679 122 LPGLGLSETDRATLVKQ--VNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDL-KAFVHVSTAFTH--CP 193 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~--~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~-~r~i~iSS~~~~--~~ 193 (303)
|.+ ++..++++ +|+|||+||.... ..++...+++|+.++.++++++.+. ++ +||||+||.+++ ..
T Consensus 63 d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~ 135 (345)
T 2z1m_A 63 EFS------NIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTSEMFGKVQ 135 (345)
T ss_dssp CHH------HHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEGGGGCSCS
T ss_pred CHH------HHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEechhhcCCCC
Confidence 876 67788774 6999999997643 3456788999999999999999987 76 899999999544 33
Q ss_pred CCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH-------H----HHHHHHhhhhh-
Q psy17679 194 RERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI-------G----MLVGIATGVLH- 258 (303)
Q Consensus 194 ~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~-------~----~~~~~~~~~~~- 258 (303)
..+++|+.... +...|..+|..+|.+++.+...+. .+.+ ..++|||. . ++.....+...
T Consensus 136 ~~~~~e~~~~~---~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r---~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~ 209 (345)
T 2z1m_A 136 EIPQTEKTPFY---PRSPYAVAKLFGHWITVNYREAYNMFACSGI---LFNHESPLRGIEFVTRKITYSLARIKYGLQDK 209 (345)
T ss_dssp SSSBCTTSCCC---CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEE---ECCEECTTSCTTSHHHHHHHHHHHHHTTSCSC
T ss_pred CCCCCccCCCC---CCChhHHHHHHHHHHHHHHHHHhCCceEeee---eeeecCCCCCCcchhHHHHHHHHHHHcCCCCe
Confidence 34566664433 345677888889999887755433 2222 23444432 1 12222334322
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..++.+...++|+|++|+|++++.++.++.
T Consensus 210 ~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~ 239 (345)
T 2z1m_A 210 LVLGNLNAKRDWGYAPEYVEAMWLMMQQPE 239 (345)
T ss_dssp EEESCTTCEECCEEHHHHHHHHHHHHTSSS
T ss_pred eeeCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence 245667788999999999999999998654
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6e-25 Score=201.59 Aligned_cols=225 Identities=14% Similarity=0.058 Sum_probs=156.4
Q ss_pred CcEEEEeCCcchhHHHHHHHHH-hcCCCccEEEEEeCCCCccc------HHHHHHHHHHhHHHhhhhccCcCcCCc---e
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLL-RSCPHLKHIYLLVRPKKGKD------IQERLDAIFEDRLFWRLRAEVPDFRSK---V 113 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll-~~g~~v~~V~~~~R~~~~~~------~~~~l~~l~~~~~~~~~~~~~~~~~~~---v 113 (303)
+|+||||||+||||+++++.|+ +.|++ |++++|...... ..+.+.+.+.. +.... ...+ +
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~ 71 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHS---VVIVDSLVGTHGKSDHVETRENVARKLQQ-----SDGPK--PPWADRYA 71 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCE---EEEEECCTTTTTCCTTSCCHHHHHHHHHH-----SCSSC--CTTTTCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCE---EEEEecCCcccccccccchHHHHHHHHHH-----hhccc--cccCCceE
Confidence 4689999999999999999999 99987 999999754310 01222211110 00000 0024 8
Q ss_pred EEEEecCCCCCCCCCHHHHHHHhc--c-ccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy17679 114 SAVAGDCSLPGLGLSETDRATLVK--Q-VNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVST 187 (303)
Q Consensus 114 ~~~~~Dl~d~~~~~~~~~~~~~~~--~-~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS 187 (303)
.++.+|+++.+ .+..+++ + +|+|||+|+.... ..++...+++|+.++.++++++.+. +++||||+||
T Consensus 72 ~~~~~Dl~d~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~iv~~SS 144 (397)
T 1gy8_A 72 ALEVGDVRNED------FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSS 144 (397)
T ss_dssp EEEESCTTCHH------HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEE
T ss_pred EEEECCCCCHH------HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCCEEEEECC
Confidence 89999999876 6777776 5 9999999998653 2456778999999999999999988 8899999999
Q ss_pred CcccC--C-------CCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCcc-----Ch-----
Q psy17679 188 AFTHC--P-------RERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVY-----GP----- 245 (303)
Q Consensus 188 ~~~~~--~-------~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~-----g~----- 245 (303)
.++.+ . ..+++|+... .+...|..+|..+|.+++.+...++ +++||+.+.+.. |+
T Consensus 145 ~~v~g~~~~~~~~~~~~~~~E~~~~---~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~ 221 (397)
T 1gy8_A 145 AAIFGNPTMGSVSTNAEPIDINAKK---SPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGS 221 (397)
T ss_dssp GGGTBSCCC-----CCCCBCTTSCC---BCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTC
T ss_pred HHHhCCCCcccccccccCcCccCCC---CCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccch
Confidence 85543 2 3466676543 3445677888899999988765432 788887654331 11
Q ss_pred HHHHH--------HHHhhh------------hhhccC------CCCccccceehhHHHHHHHHHHhhcc
Q psy17679 246 IGMLV--------GIATGV------------LHTHLI------NLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 246 ~~~~~--------~~~~~~------------~~~~~~------~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..++. .+..+. ...+++ .+.+.++|||++|+|++++.++..+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~ 290 (397)
T 1gy8_A 222 THLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVE 290 (397)
T ss_dssp CSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhccc
Confidence 12222 222332 123444 56788999999999999999998754
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-25 Score=201.34 Aligned_cols=211 Identities=18% Similarity=0.144 Sum_probs=153.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcC-CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSC-PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g-~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++|+||||||+||||++|++.|++.| ++ |++++|++..... .. ..++. +.+|+
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~~-~~--------------------~~~~~-~~~d~ 98 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITD---ILVVDNLKDGTKF-VN--------------------LVDLN-IADYM 98 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCC---EEEEECCSSGGGG-GG--------------------TTTSC-CSEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcE---EEEEecCCCcchh-hc--------------------ccCce-Eeeec
Confidence 456899999999999999999999999 77 8999997643210 00 02233 67888
Q ss_pred CCCCCCCCHHHHHHHhc-----cccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--
Q psy17679 121 SLPGLGLSETDRATLVK-----QVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC-- 192 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-----~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~-- 192 (303)
++.+ .+..+++ ++|+|||+|+.... ..++...+++|+.++.++++++.+. ++ ||||+||.++.+
T Consensus 99 ~~~~------~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~SS~~v~g~~ 170 (357)
T 2x6t_A 99 DKED------FLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGR 170 (357)
T ss_dssp EHHH------HHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGCSC
T ss_pred CcHH------HHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcchHHhCCC
Confidence 8765 5777776 59999999997654 3456788999999999999999998 77 999999995543
Q ss_pred CCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccCh---------HHHHHHHHhhhhhhc
Q psy17679 193 PRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGP---------IGMLVGIATGVLHTH 260 (303)
Q Consensus 193 ~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~---------~~~~~~~~~~~~~~~ 260 (303)
...+++|+....| ...|..+|..+|.+++.+....+ ++++|+.+.+.... ..++..+..+....+
T Consensus 171 ~~~~~~E~~~~~p---~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (357)
T 2x6t_A 171 TSDFIESREYEKP---LNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKL 247 (357)
T ss_dssp SSCCCSSGGGCCC---SSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEE
T ss_pred CCCCcCCcCCCCC---CChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEE
Confidence 3336777664444 44677888889999998865543 78888765433211 123334444554455
Q ss_pred cCCCCc-cccceehhHHHHHHHHHHhhcc
Q psy17679 261 LINLNT-VTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 261 ~~~~~~-~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
++.+.. .++|+|++|+|++++.++.++.
T Consensus 248 ~~~~~~~~~~~i~v~Dva~ai~~~~~~~~ 276 (357)
T 2x6t_A 248 FEGSENFKRDFVYVGDVADVNLWFLENGV 276 (357)
T ss_dssp ETTGGGCEECEEEHHHHHHHHHHHHHHCC
T ss_pred eCCCCcceEccEEHHHHHHHHHHHHhcCC
Confidence 667777 8999999999999999998765
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-25 Score=195.64 Aligned_cols=207 Identities=18% Similarity=0.146 Sum_probs=145.8
Q ss_pred EEEEeCCcchhHHHHHHHHHhcC-CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSC-PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g-~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
+|||||||||||++++++|++.| ++ |++++|++..... ..+ .++. +.+|+++.+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~~-~~~--------------------~~~~-~~~d~~~~~ 55 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITD---ILVVDNLKDGTKF-VNL--------------------VDLN-IADYMDKED 55 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCC---EEEEECCSSGGGG-HHH--------------------HTSC-CSEEEEHHH
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcE---EEEEccCCCCchh-hhc--------------------Ccce-eccccccHH
Confidence 48999999999999999999999 77 8999997653211 111 1222 678888765
Q ss_pred CCCCHHHHHHHhcc-----ccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCCc
Q psy17679 125 LGLSETDRATLVKQ-----VNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRER 196 (303)
Q Consensus 125 ~~~~~~~~~~~~~~-----~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~~ 196 (303)
.+..++++ +|+|||+|+.... ..++...+++|+.++.++++++.+. ++ ||||+||.++.+ ...+
T Consensus 56 ------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g~~~~~~ 127 (310)
T 1eq2_A 56 ------FLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTSDF 127 (310)
T ss_dssp ------HHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGTTCCSCB
T ss_pred ------HHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHHHhCCCCCCC
Confidence 57777764 9999999997653 3456788999999999999999998 77 999999995543 2336
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccCh---------HHHHHHHHhhhhhhccCCC
Q psy17679 197 IDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGP---------IGMLVGIATGVLHTHLINL 264 (303)
Q Consensus 197 ~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~---------~~~~~~~~~~~~~~~~~~~ 264 (303)
++|+....| ...|..+|..+|.+++.+....+ ++++||.+.+.... ..++..+..+....+++++
T Consensus 128 ~~E~~~~~p---~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 204 (310)
T 1eq2_A 128 IESREYEKP---LNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGS 204 (310)
T ss_dssp CSSGGGCCC---SSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC----------
T ss_pred CCCCCCCCC---CChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCC
Confidence 677654444 44577788889999998865433 78888766443321 1233344445555567777
Q ss_pred Cc-cccceehhHHHHHHHHHHhhcc
Q psy17679 265 NT-VTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 265 ~~-~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. .++|+|++|+|++++.++.++.
T Consensus 205 ~~~~~~~i~v~Dva~~~~~~~~~~~ 229 (310)
T 1eq2_A 205 ENFKRDFVYVGDVADVNLWFLENGV 229 (310)
T ss_dssp ---CBCEEEHHHHHHHHHHHHHHCC
T ss_pred CcceEccEEHHHHHHHHHHHHhcCC
Confidence 78 8999999999999999998765
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=7.2e-25 Score=199.70 Aligned_cols=219 Identities=15% Similarity=0.082 Sum_probs=154.2
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+||||||+||||+++++.|++.|++ |++++|++.... .+.++.+... . ......++.++.+|++|.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~-~~~~~~l~~~-----~---~~~~~~~~~~~~~Dl~d~~ 92 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYE---VHGIVRRSSSFN-TGRIEHLYKN-----P---QAHIEGNMKLHYGDLTDST 92 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCC-CTTTGGGC-----------------CEEEEECCTTCHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCE---EEEEECCccccc-hhhHHHHhhh-----h---ccccCCCceEEEccCCCHH
Confidence 78999999999999999999999987 999999764311 0000000000 0 0001247889999999876
Q ss_pred CCCCHHHHHHHhcc--ccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCC---ceEEEEeCCcccC--CC
Q psy17679 125 LGLSETDRATLVKQ--VNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDL---KAFVHVSTAFTHC--PR 194 (303)
Q Consensus 125 ~~~~~~~~~~~~~~--~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~---~r~i~iSS~~~~~--~~ 194 (303)
++..++++ +|+|||+||.... ..++...+++|+.++.++++++.+. ++ +||||+||.++.. ..
T Consensus 93 ------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~iv~~SS~~~~~~~~~ 165 (375)
T 1t2a_A 93 ------CLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKFYQASTSELYGKVQE 165 (375)
T ss_dssp ------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGTCSCSS
T ss_pred ------HHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEecchhhhCCCCC
Confidence 67788774 6999999998654 2456678899999999999999987 66 7999999995544 33
Q ss_pred CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH-----------HHHHHHHhhhhh-h
Q psy17679 195 ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI-----------GMLVGIATGVLH-T 259 (303)
Q Consensus 195 ~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~-----------~~~~~~~~~~~~-~ 259 (303)
.+++|+....| ...|..+|..+|.+++.+...+. ++++| .++|||. .++..+..+... .
T Consensus 166 ~~~~E~~~~~~---~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~---~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~ 239 (375)
T 1t2a_A 166 IPQKETTPFYP---RSPYGAAKLYAYWIVVNFREAYNLFAVNGIL---FNHESPRRGANFVTRKISRSVAKIYLGQLECF 239 (375)
T ss_dssp SSBCTTSCCCC---CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE---CCEECTTSCTTSHHHHHHHHHHHHHHTSCSCE
T ss_pred CCCCccCCCCC---CChhHHHHHHHHHHHHHHHHHhCCCEEEEec---ccccCCCCCCCcchHHHHHHHHHHHcCCCcee
Confidence 46777754444 45677888889999988765433 45554 4556652 122223334322 3
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.++.++..++|+|++|+|++++.++.++.
T Consensus 240 ~~g~~~~~~~~i~v~Dva~a~~~~~~~~~ 268 (375)
T 1t2a_A 240 SLGNLDAKRDWGHAKDYVEAMWLMLQNDE 268 (375)
T ss_dssp EESCTTCEECCEEHHHHHHHHHHHHHSSS
T ss_pred EeCCCCceeeeEEHHHHHHHHHHHHhcCC
Confidence 46778889999999999999999998654
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-24 Score=195.92 Aligned_cols=208 Identities=17% Similarity=0.178 Sum_probs=154.9
Q ss_pred cccccCCcEEEEeCCcchhHHHHHHHHHhc-CC-CccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEE
Q psy17679 38 MQEFYRDKTIFLTGGTGFMGKTVVEKLLRS-CP-HLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSA 115 (303)
Q Consensus 38 ~~~~~~~~~vlItGatG~iG~~l~~~Ll~~-g~-~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~ 115 (303)
+...+++|+||||||||++|++++++|++. |+ + |++++|++.. ...+.+.+. ..++.+
T Consensus 15 ~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~---V~~~~r~~~~---~~~~~~~~~--------------~~~v~~ 74 (344)
T 2gn4_A 15 HQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKK---IIVYSRDELK---QSEMAMEFN--------------DPRMRF 74 (344)
T ss_dssp -CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSE---EEEEESCHHH---HHHHHHHHC--------------CTTEEE
T ss_pred HHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCE---EEEEECChhh---HHHHHHHhc--------------CCCEEE
Confidence 344577899999999999999999999999 87 5 9999997431 111111110 157899
Q ss_pred EEecCCCCCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC
Q psy17679 116 VAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC 192 (303)
Q Consensus 116 ~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~ 192 (303)
+.+|++|.+ .+..+++++|+|||+||.... ..++...+++|+.++.++++++.+. ++++||++||..+..
T Consensus 75 ~~~Dl~d~~------~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~~V~~SS~~~~~ 147 (344)
T 2gn4_A 75 FIGDVRDLE------RLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQVIALSTDKAAN 147 (344)
T ss_dssp EECCTTCHH------HHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGGSS
T ss_pred EECCCCCHH------HHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEecCCccCC
Confidence 999999976 788999999999999997642 2345678999999999999999998 899999999975421
Q ss_pred CCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccCh--HHHHHHHHhhh-hhhccCC
Q psy17679 193 PRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGP--IGMLVGIATGV-LHTHLIN 263 (303)
Q Consensus 193 ~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~--~~~~~~~~~~~-~~~~~~~ 263 (303)
+...|..+|..+|.+++.+...+ . +++|||.+.+..+. ..+...+..+. ...+. .
T Consensus 148 ---------------p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~-~ 211 (344)
T 2gn4_A 148 ---------------PINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPIT-D 211 (344)
T ss_dssp ---------------CCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEES-C
T ss_pred ---------------CccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEe-C
Confidence 23467788999999999876432 2 78899765433221 12333333444 33333 5
Q ss_pred CCccccceehhHHHHHHHHHHhhcc
Q psy17679 264 LNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 264 ~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+...++|+|++|+|++++.++.++.
T Consensus 212 ~~~~r~~i~v~D~a~~v~~~l~~~~ 236 (344)
T 2gn4_A 212 IRMTRFWITLDEGVSFVLKSLKRMH 236 (344)
T ss_dssp TTCEEEEECHHHHHHHHHHHHHHCC
T ss_pred CCeEEeeEEHHHHHHHHHHHHhhcc
Confidence 6778899999999999999998753
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.2e-25 Score=197.00 Aligned_cols=214 Identities=16% Similarity=0.163 Sum_probs=155.5
Q ss_pred ccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 39 QEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 39 ~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
...+++|+|||||||||||++++++|++.|++ |++++|...... ..+.. . ....++.++.+
T Consensus 22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~--~~~~~------------~--~~~~~~~~~~~ 82 (343)
T 2b69_A 22 HMEKDRKRILITGGAGFVGSHLTDKLMMDGHE---VTVVDNFFTGRK--RNVEH------------W--IGHENFELINH 82 (343)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCG--GGTGG------------G--TTCTTEEEEEC
T ss_pred ccccCCCEEEEEcCccHHHHHHHHHHHHCCCE---EEEEeCCCccch--hhhhh------------h--ccCCceEEEeC
Confidence 34567899999999999999999999999987 999999754221 00000 0 00257889999
Q ss_pred cCCCCCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--C
Q psy17679 119 DCSLPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--P 193 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~ 193 (303)
|+.+.. +.++|+|||+|+.... ..++...+++|+.++.++++++.+. ++ ||||+||.++++ .
T Consensus 83 D~~~~~-----------~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g~~~ 149 (343)
T 2b69_A 83 DVVEPL-----------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGDPE 149 (343)
T ss_dssp CTTSCC-----------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBSCS
T ss_pred ccCChh-----------hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEECcHHHhCCCC
Confidence 998864 3579999999997653 3456678899999999999999988 65 999999995543 3
Q ss_pred CCccccCCCC--CCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH----------HHHHHHHhhhhh
Q psy17679 194 RERIDEEFYP--VPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI----------GMLVGIATGVLH 258 (303)
Q Consensus 194 ~~~~~E~~~~--~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~----------~~~~~~~~~~~~ 258 (303)
..+++|+.+. .|..+...|..+|..+|.+++.+..... ++++|+.+ |||. .++.....+...
T Consensus 150 ~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v---~G~~~~~~~~~~~~~~~~~~~~~~~~ 226 (343)
T 2b69_A 150 VHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNT---FGPRMHMNDGRVVSNFILQALQGEPL 226 (343)
T ss_dssp SSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE---ECTTCCTTCCCHHHHHHHHHHHTCCE
T ss_pred CCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcce---eCcCCCCCcccHHHHHHHHHHcCCCc
Confidence 3456666432 3555677888999999999887654322 78888654 4442 234445556555
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.+++.+...++|+|++|+|++++.++..+
T Consensus 227 ~~~~~~~~~~~~v~v~Dva~a~~~~~~~~ 255 (343)
T 2b69_A 227 TVYGSGSQTRAFQYVSDLVNGLVALMNSN 255 (343)
T ss_dssp EEESSSCCEEECEEHHHHHHHHHHHHTSS
T ss_pred eEcCCCCeEEeeEeHHHHHHHHHHHHhcC
Confidence 56778888999999999999999998754
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-25 Score=197.48 Aligned_cols=210 Identities=16% Similarity=0.034 Sum_probs=147.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCccc-HHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKD-IQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~-~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++|+|||||||||+|+++++.|++.|++ |++++|+..... .... +... ....+++++.+|+
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~------------~~~~--~~~~~~~~~~~Dl 67 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEE---VTVLDDLRVPPMIPPEG------------TGKF--LEKPVLELEERDL 67 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCC---EEEECCCSSCCSSCCTT------------SSEE--ECSCGGGCCHHHH
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCE---EEEEecCCcccccchhh------------hhhh--ccCCCeeEEeCcc
Confidence 45789999999999999999999999998 999999764100 0000 0000 0012333334443
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCC
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRE 195 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~ 195 (303)
. ++|+|||+|+.... ..+....++ |+.++.++++++.+. +++||||+||.++++ ...
T Consensus 68 ~----------------~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~SS~~v~~~~~~~ 129 (321)
T 3vps_A 68 S----------------DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGSTCEVYGQADTL 129 (321)
T ss_dssp T----------------TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSSS
T ss_pred c----------------cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEecCHHHhCCCCCC
Confidence 2 78999999998653 233445667 999999999999998 799999999995443 445
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----cEEeecceecCccCh-----HHHHHHHHhhhhhhccCCCCc
Q psy17679 196 RIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----VHISGTGWIDNVYGP-----IGMLVGIATGVLHTHLINLNT 266 (303)
Q Consensus 196 ~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~~ii~pg~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~ 266 (303)
+++|+....| ...|..+|..+|.+++.+.... .+++||+.+.+.... ..++..+..+....+++++..
T Consensus 130 ~~~E~~~~~p---~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (321)
T 3vps_A 130 PTPEDSPLSP---RSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQ 206 (321)
T ss_dssp SBCTTSCCCC---CSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCC
T ss_pred CCCCCCCCCC---CChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCc
Confidence 6777755444 4567778888999998875432 278888755332211 134455555666667788889
Q ss_pred cccceehhHHHHHHHHHHhhccc
Q psy17679 267 VTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 267 ~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.++|+|++|+|++++.++.++..
T Consensus 207 ~~~~v~v~Dva~~~~~~~~~~~~ 229 (321)
T 3vps_A 207 RRDFTYITDVVDKLVALANRPLP 229 (321)
T ss_dssp EECEEEHHHHHHHHHHGGGSCCC
T ss_pred eEceEEHHHHHHHHHHHHhcCCC
Confidence 99999999999999999987755
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-25 Score=195.76 Aligned_cols=206 Identities=23% Similarity=0.242 Sum_probs=153.0
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+||||||+||||++++++|++.|++ |++++|...... + ....++.++.+|+++.+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~~~--~-------------------~~~~~~~~~~~Dl~~~~ 56 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLE---VAVLDNLATGKR--E-------------------NVPKGVPFFRVDLRDKE 56 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCE---EEEECCCSSCCG--G-------------------GSCTTCCEECCCTTCHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCE---EEEEECCCcCch--h-------------------hcccCeEEEECCCCCHH
Confidence 57999999999999999999999987 888888543211 0 00136778999999876
Q ss_pred CCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC-cccC---CCC
Q psy17679 125 LGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA-FTHC---PRE 195 (303)
Q Consensus 125 ~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~-~~~~---~~~ 195 (303)
.+..+++ ++|+|||+|+.... ..++...+++|+.++.++++++.+. +++|||++||. ...+ ...
T Consensus 57 ------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~~g~~~~~~ 129 (311)
T 2p5y_A 57 ------GVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFASTGGAIYGEVPEGE 129 (311)
T ss_dssp ------HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEHHHHHCCCCTTC
T ss_pred ------HHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCChhhcCCCCCCC
Confidence 6777777 89999999997543 2455678899999999999999987 78999999998 4332 233
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH-----------HHHHHHHhhhhhhcc
Q psy17679 196 RIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI-----------GMLVGIATGVLHTHL 261 (303)
Q Consensus 196 ~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~-----------~~~~~~~~~~~~~~~ 261 (303)
+++|+....| ...|..+|..+|.+++.+....+ +++||+.+ |||. .++.....+....++
T Consensus 130 ~~~E~~~~~~---~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v---~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (311)
T 2p5y_A 130 RAEETWPPRP---KSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNV---YGPRQDPHGEAGVVAIFAERVLKGLPVTLY 203 (311)
T ss_dssp CBCTTSCCCC---CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEE---ECTTCCSSSTTHHHHHHHHHHHHTCCEEEE
T ss_pred CcCCCCCCCC---CChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccc---cCcCCCCCCcCcHHHHHHHHHHcCCCcEEE
Confidence 5666654334 44677888889999887654322 78888754 4432 123333445544455
Q ss_pred -----CCCCccccceehhHHHHHHHHHHhhc
Q psy17679 262 -----INLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 262 -----~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+.+...++|+|++|+|++++.++.++
T Consensus 204 ~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~ 234 (311)
T 2p5y_A 204 ARKTPGDEGCVRDYVYVGDVAEAHALALFSL 234 (311)
T ss_dssp CSSSTTSCCCEECEEEHHHHHHHHHHHHHHC
T ss_pred ecccCCCCCeEEeeEEHHHHHHHHHHHHhCC
Confidence 77788899999999999999999864
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=193.90 Aligned_cols=204 Identities=13% Similarity=0.107 Sum_probs=149.3
Q ss_pred EEEEeCCcchhHHHHHHHHHhc--CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRS--CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~--g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+||||||+||||+++++.|++. |++ |++++|+.... .++.++.+|++|.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~--------------------------~~~~~~~~D~~d~ 51 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKN---VIASDIVQRDT--------------------------GGIKFITLDVSNR 51 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGG---EEEEESSCCCC--------------------------TTCCEEECCTTCH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCE---EEEecCCCccc--------------------------cCceEEEecCCCH
Confidence 5899999999999999999998 777 88998875321 2467899999987
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcceeccc--cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCC---Cc
Q psy17679 124 GLGLSETDRATLVK--QVNIVFHGAATVRF--DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPR---ER 196 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--~~dvVi~~a~~~~~--~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~---~~ 196 (303)
+ .+..+++ ++|+|||+|+.... ..++...+++|+.++.++++++.+. +++||||+||.++.... .+
T Consensus 52 ~------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~ 124 (317)
T 3ajr_A 52 D------EIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPSTIGVFGPETPKNK 124 (317)
T ss_dssp H------HHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCTTSCSSS
T ss_pred H------HHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecCHHHhCCCCCCCC
Confidence 6 6888887 89999999997542 2456778899999999999999998 88999999999665432 24
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCc-cChH--------HHHHHHHhhhhhhccCCC
Q psy17679 197 IDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNV-YGPI--------GMLVGIATGVLHTHLINL 264 (303)
Q Consensus 197 ~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~-~g~~--------~~~~~~~~~~~~~~~~~~ 264 (303)
.+|+.. ..+...|..+|..+|.+++.+....+ +++||+.+.+. ..|. ..+.....+.....++.+
T Consensus 125 ~~e~~~---~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (317)
T 3ajr_A 125 VPSITI---TRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAP 201 (317)
T ss_dssp BCSSSC---CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCT
T ss_pred cccccc---CCCCchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCc
Confidence 455443 33455677888889999887654332 67775433221 1111 122223333333445667
Q ss_pred CccccceehhHHHHHHHHHHhhcc
Q psy17679 265 NTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 265 ~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+..++|+|++|+|++++.++.++.
T Consensus 202 ~~~~~~i~v~Dva~a~~~~l~~~~ 225 (317)
T 3ajr_A 202 NRALPMMYMPDALKALVDLYEADR 225 (317)
T ss_dssp TCCEEEEEHHHHHHHHHHHHHCCG
T ss_pred cceeeeeEHHHHHHHHHHHHhCCc
Confidence 888999999999999999998764
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-24 Score=193.31 Aligned_cols=204 Identities=19% Similarity=0.185 Sum_probs=150.0
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+||||||+||||+++++.|++.|++ |++++|+..... +. + .. ..++.++.+|+
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~--~~------------l----~~-~~~~~~~~~Dl 75 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGDK---VVGIDNFATGRR--EH------------L----KD-HPNLTFVEGSI 75 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCG--GG------------S----CC-CTTEEEEECCT
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCCE---EEEEECCCccch--hh------------H----hh-cCCceEEEEeC
Confidence 456789999999999999999999999987 999999754211 00 0 00 14788999999
Q ss_pred CCCCCCCCHHHHHHHhcc--ccEEEEcceecccc--ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC----
Q psy17679 121 SLPGLGLSETDRATLVKQ--VNIVFHGAATVRFD--EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC---- 192 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~--~dvVi~~a~~~~~~--~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~---- 192 (303)
+|.+ .+..++++ +|+|||+||..... .++ . +++|+.++.++++++.+. +++||||+||.++.+
T Consensus 76 ~d~~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~-~-~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~~g~~~~ 146 (333)
T 2q1w_A 76 ADHA------LVNQLIGDLQPDAVVHTAASYKDPDDWYN-D-TLTNCVGGSNVVQAAKKN-NVGRFVYFQTALCYGVKPI 146 (333)
T ss_dssp TCHH------HHHHHHHHHCCSEEEECCCCCSCTTCHHH-H-HHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGCSCCC
T ss_pred CCHH------HHHHHHhccCCcEEEECceecCCCccCCh-H-HHHHHHHHHHHHHHHHHh-CCCEEEEECcHHHhCCCcc
Confidence 9876 68888887 99999999976542 222 2 889999999999999998 889999999995543
Q ss_pred C-CCccccCCCCCCCChh-hHHHHHHHHHHHHHHh-hCcCCcEEeecceecCccChH-------HHHHHHHhhhhhhccC
Q psy17679 193 P-RERIDEEFYPVPLKYE-NLIQLISETGDEELSE-MTPNRVHISGTGWIDNVYGPI-------GMLVGIATGVLHTHLI 262 (303)
Q Consensus 193 ~-~~~~~E~~~~~~~~~~-~~~~~~k~~~E~~~~~-~~~~~~~ii~pg~~~~~~g~~-------~~~~~~~~~~~~~~~~ 262 (303)
. ..+++|+. .+. ..|..+|..+|.+++. +. ..+++||+.+ |||. .++.....+. .+++
T Consensus 147 ~~~~~~~E~~-----~p~~~~Y~~sK~~~E~~~~~s~~--~~~ilR~~~v---~gp~~~~~~~~~~~~~~~~~~--~~~~ 214 (333)
T 2q1w_A 147 QQPVRLDHPR-----NPANSSYAISKSANEDYLEYSGL--DFVTFRLANV---VGPRNVSGPLPIFFQRLSEGK--KCFV 214 (333)
T ss_dssp SSSBCTTSCC-----CCTTCHHHHHHHHHHHHHHHHTC--CEEEEEESEE---ESTTCCSSHHHHHHHHHHTTC--CCEE
T ss_pred cCCCCcCCCC-----CCCCCchHHHHHHHHHHHHhhhC--CeEEEeeceE---ECcCCcCcHHHHHHHHHHcCC--eeeC
Confidence 1 11555554 233 5677889999999998 76 3368887644 4443 1233333343 3455
Q ss_pred CCCccccceehhHHHHHHHHHHhhcc
Q psy17679 263 NLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 263 ~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+...++|+|++|+|++++.++.++.
T Consensus 215 -~~~~~~~i~v~Dva~ai~~~~~~~~ 239 (333)
T 2q1w_A 215 -TKARRDFVFVKDLARATVRAVDGVG 239 (333)
T ss_dssp -EECEECEEEHHHHHHHHHHHHTTCC
T ss_pred -CCceEeeEEHHHHHHHHHHHHhcCC
Confidence 6678899999999999999998765
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-24 Score=195.62 Aligned_cols=216 Identities=16% Similarity=0.141 Sum_probs=155.3
Q ss_pred cEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
|+||||||+||||+++++.|++. |++ |++++|...... .+.+.++ ....++.++.+|++|.
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~---V~~~~r~~~~~~-~~~~~~~--------------~~~~~~~~~~~Dl~d~ 62 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDT---VVNIDKLTYAGN-LESLSDI--------------SESNRYNFEHADICDS 62 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCE---EEEEECCCTTCC-GGGGTTT--------------TTCTTEEEEECCTTCH
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCe---EEEEecCCCCCc-hhhhhhh--------------hcCCCeEEEECCCCCH
Confidence 57999999999999999999998 676 999998752111 0000000 0025789999999987
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhc-CCCc-------eEEEEeCCcc
Q psy17679 124 GLGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREM-KDLK-------AFVHVSTAFT 190 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~-------r~i~iSS~~~ 190 (303)
+ .+..+++ ++|+|||+||.... ..++...+++|+.++.++++++.+. .+++ ||||+||.++
T Consensus 63 ~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v 136 (361)
T 1kew_A 63 A------EITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEV 136 (361)
T ss_dssp H------HHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGG
T ss_pred H------HHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHH
Confidence 6 6888887 89999999998653 2355678999999999999999875 1344 9999999854
Q ss_pred cCCCC------------ccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccCh-----HHHHH
Q psy17679 191 HCPRE------------RIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGP-----IGMLV 250 (303)
Q Consensus 191 ~~~~~------------~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~-----~~~~~ 250 (303)
.+... +++|+... .+...|..+|..+|.+++.+...++ ++++||.+.+.... ..++.
T Consensus 137 ~g~~~~~~~~~~~~~~~~~~E~~~~---~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~ 213 (361)
T 1kew_A 137 YGDLPHPDEVENSVTLPLFTETTAY---APSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVIL 213 (361)
T ss_dssp GCCCCCGGGSCTTSCCCCBCTTSCC---CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHH
T ss_pred hCCCcccccccccccCCCCCCCCCC---CCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHH
Confidence 43221 56666433 3445677888889999988754332 78888765433221 12334
Q ss_pred HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 251 GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.+..+....+++.+...++|+|++|+|++++.++.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 250 (361)
T 1kew_A 214 NALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG 250 (361)
T ss_dssp HHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred HHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCC
Confidence 4445554456677888899999999999999999865
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=194.87 Aligned_cols=214 Identities=18% Similarity=0.148 Sum_probs=154.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcC-------CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceE
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSC-------PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVS 114 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g-------~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~ 114 (303)
+++|+||||||+||||+++++.|++.| ++ |++++|+...... ....++.
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~---V~~~~r~~~~~~~---------------------~~~~~~~ 67 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEK---FTLIDVFQPEAPA---------------------GFSGAVD 67 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEE---EEEEESSCCCCCT---------------------TCCSEEE
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCce---EEEEEccCCcccc---------------------ccCCcee
Confidence 567899999999999999999999998 55 9999997542210 0125788
Q ss_pred EEEecCCCCCCCCCHHHHHHHhc-cccEEEEcceeccc--cccHHHHHhhhHHHHHHHHHHHHhcC----CCceEEEEeC
Q psy17679 115 AVAGDCSLPGLGLSETDRATLVK-QVNIVFHGAATVRF--DEHIKMAVKINVCGVQAMLQLAREMK----DLKAFVHVST 187 (303)
Q Consensus 115 ~~~~Dl~d~~~~~~~~~~~~~~~-~~dvVi~~a~~~~~--~~~~~~~~~~N~~~~~~ll~~a~~~~----~~~r~i~iSS 187 (303)
++.+|++|.+ .+..+++ ++|+|||+||.... ..++...+++|+.++.++++++.+.+ ++++|||+||
T Consensus 68 ~~~~Dl~d~~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS 141 (342)
T 2hrz_A 68 ARAADLSAPG------EAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSS 141 (342)
T ss_dssp EEECCTTSTT------HHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_pred EEEcCCCCHH------HHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCc
Confidence 9999999987 6888884 89999999997642 34567788999999999999998872 2789999999
Q ss_pred CcccCC--CCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecC----ccCh-H----HHHHHHH
Q psy17679 188 AFTHCP--RERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDN----VYGP-I----GMLVGIA 253 (303)
Q Consensus 188 ~~~~~~--~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~----~~g~-~----~~~~~~~ 253 (303)
..+... ..+++|+....| ...|..+|..+|.+++.+...+. .++++..+.. ..++ . .++....
T Consensus 142 ~~~~~~~~~~~~~E~~~~~~---~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~ 218 (342)
T 2hrz_A 142 IAVFGAPLPYPIPDEFHTTP---LTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPL 218 (342)
T ss_dssp GGGCCSSCCSSBCTTCCCCC---SSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHH
T ss_pred hHhhCCCCCCCcCCCCCCCC---cchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHh
Confidence 955442 346777765444 45677888889999988765532 4454322211 1111 1 2233334
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+....+++.++...+++|++|+|++++.++..+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~ 253 (342)
T 2hrz_A 219 VGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDV 253 (342)
T ss_dssp TTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCH
T ss_pred cCCCeeccCCCccceeeEehHHHHHHHHHHHhccc
Confidence 45443445555667789999999999999998653
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=184.29 Aligned_cols=202 Identities=17% Similarity=0.197 Sum_probs=148.2
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCce-EEEEe
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKV-SAVAG 118 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v-~~~~~ 118 (303)
..+++|+|+||||||+||+++++.|+++|++ |++++|++.... .+.. .++ .++.+
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~---V~~~~R~~~~~~------~~~~---------------~~~~~~~~~ 72 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHE---PVAMVRNEEQGP------ELRE---------------RGASDIVVA 72 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSGGGHH------HHHH---------------TTCSEEEEC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCe---EEEEECChHHHH------HHHh---------------CCCceEEEc
Confidence 3477899999999999999999999999987 999999865321 1111 478 89999
Q ss_pred cCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccc
Q psy17679 119 DCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERID 198 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~ 198 (303)
|++ + ++.+++.++|+|||+||.... ..+...+++|+.++.++++++.+. +++|||++||..+...
T Consensus 73 Dl~--~------~~~~~~~~~D~vi~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~----- 137 (236)
T 3e8x_A 73 NLE--E------DFSHAFASIDAVVFAAGSGPH-TGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGTVDP----- 137 (236)
T ss_dssp CTT--S------CCGGGGTTCSEEEECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTCSCG-----
T ss_pred ccH--H------HHHHHHcCCCEEEECCCCCCC-CCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCCCCC-----
Confidence 999 2 467788899999999997543 457788999999999999999988 8899999999644321
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHH
Q psy17679 199 EEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVN 278 (303)
Q Consensus 199 E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ 278 (303)
+. .+ .+...|..+|..+|.+++... -..++++||++.+... .+. ......+...+++++++|+|+
T Consensus 138 ~~---~~-~~~~~Y~~sK~~~e~~~~~~g-i~~~~lrpg~v~~~~~---------~~~-~~~~~~~~~~~~~i~~~Dva~ 202 (236)
T 3e8x_A 138 DQ---GP-MNMRHYLVAKRLADDELKRSS-LDYTIVRPGPLSNEES---------TGK-VTVSPHFSEITRSITRHDVAK 202 (236)
T ss_dssp GG---SC-GGGHHHHHHHHHHHHHHHHSS-SEEEEEEECSEECSCC---------CSE-EEEESSCSCCCCCEEHHHHHH
T ss_pred CC---Ch-hhhhhHHHHHHHHHHHHHHCC-CCEEEEeCCcccCCCC---------CCe-EEeccCCCcccCcEeHHHHHH
Confidence 11 11 466778899999999887321 1128999986644321 111 122334455689999999999
Q ss_pred HHHHHHhhcccCCcchh
Q psy17679 279 SMISIAWSIGESGKVEK 295 (303)
Q Consensus 279 ai~~~~~~~~~~~~~~~ 295 (303)
+++.++.++...+..+.
T Consensus 203 ~~~~~~~~~~~~g~~~~ 219 (236)
T 3e8x_A 203 VIAELVDQQHTIGKTFE 219 (236)
T ss_dssp HHHHHTTCGGGTTEEEE
T ss_pred HHHHHhcCccccCCeEE
Confidence 99999998765444443
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-24 Score=191.87 Aligned_cols=205 Identities=19% Similarity=0.154 Sum_probs=150.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+||||||+||||+++++.|++.|++ |++++|+...... . . ....++.++.+|+
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~--~----------------~-~~l~~v~~~~~Dl 74 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGHE---ILVIDNFATGKRE--V----------------L-PPVAGLSVIEGSV 74 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTCE---EEEEECCSSSCGG--G----------------S-CSCTTEEEEECCT
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCCccchh--h----------------h-hccCCceEEEeeC
Confidence 466789999999999999999999999987 9999996542110 0 0 0014788999999
Q ss_pred CCCCCCCCHHHHHHHhc--cccEEEEcceecccc--ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCC--
Q psy17679 121 SLPGLGLSETDRATLVK--QVNIVFHGAATVRFD--EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPR-- 194 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~~--~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~-- 194 (303)
+|.+ ++..+++ ++|+|||+||..... .++. +++|+.++.++++++.+. +++||||+||.++....
T Consensus 75 ~d~~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~~~~~~~ 145 (330)
T 2pzm_A 75 TDAG------LLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKA-GVKRLLNFQTALCYGRPAT 145 (330)
T ss_dssp TCHH------HHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHH-TCSEEEEEEEGGGGCSCSS
T ss_pred CCHH------HHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHc-CCCEEEEecCHHHhCCCcc
Confidence 9876 6888888 999999999976541 2233 889999999999999988 78999999999665432
Q ss_pred C--ccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChH---HH----HHHHHhhhhhhccCCCC
Q psy17679 195 E--RIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPI---GM----LVGIATGVLHTHLINLN 265 (303)
Q Consensus 195 ~--~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~---~~----~~~~~~~~~~~~~~~~~ 265 (303)
. +++|+. .+...|..+|..+|.+++.+ ....+++||+. +|||. .+ +..+..+. .+++.+.
T Consensus 146 ~~~~~~E~~-----~~~~~Y~~sK~~~e~~~~~~-~~~~~~iR~~~---v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~ 214 (330)
T 2pzm_A 146 VPIPIDSPT-----APFTSYGISKTAGEAFLMMS-DVPVVSLRLAN---VTGPRLAIGPIPTFYKRLKAGQ--KCFCSDT 214 (330)
T ss_dssp SSBCTTCCC-----CCCSHHHHHHHHHHHHHHTC-SSCEEEEEECE---EECTTCCSSHHHHHHHHHHTTC--CCCEESC
T ss_pred CCCCcCCCC-----CCCChHHHHHHHHHHHHHHc-CCCEEEEeeee---eECcCCCCCHHHHHHHHHHcCC--EEeCCCC
Confidence 1 566654 34456778889999999887 22226777653 34443 12 22223333 4455555
Q ss_pred ccccceehhHHHH-HHHHHHhhcc
Q psy17679 266 TVTDMVPVDLVVN-SMISIAWSIG 288 (303)
Q Consensus 266 ~~~~~i~v~D~a~-ai~~~~~~~~ 288 (303)
.++|+|++|+|+ +++.++.++.
T Consensus 215 -~~~~i~~~Dva~~a~~~~~~~~~ 237 (330)
T 2pzm_A 215 -VRDFLDMSDFLAIADLSLQEGRP 237 (330)
T ss_dssp -EECEEEHHHHHHHHHHHTSTTCC
T ss_pred -EecceeHHHHHHHHHHHHhhcCC
Confidence 889999999999 9999988753
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=198.30 Aligned_cols=219 Identities=18% Similarity=0.123 Sum_probs=150.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
||+||||||+||||+++++.|++.|++ |++++|+..... .+.++.+.... .....++.++.+|++|.
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~~~Dl~d~ 67 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYE---VHGIKRRASSFN-TERVDHIYQDP---------HTCNPKFHLHYGDLSDT 67 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECC-------------------------------CCEEECCCCSSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE---EEEEECCCcccc-hHHHHHHhhcc---------ccCCCceEEEECCCCCH
Confidence 478999999999999999999999987 999999754211 11121111100 00015788999999987
Q ss_pred CCCCCHHHHHHHhcc--ccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCC---ceEEEEeCCcccC--C
Q psy17679 124 GLGLSETDRATLVKQ--VNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDL---KAFVHVSTAFTHC--P 193 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~--~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~---~r~i~iSS~~~~~--~ 193 (303)
+ ++..++++ +|+|||+||.... ..++...+++|+.++.++++++.+. ++ ++|||+||.++.. .
T Consensus 68 ~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~iv~~SS~~v~g~~~ 140 (372)
T 1db3_A 68 S------NLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQASTSELYGLVQ 140 (372)
T ss_dssp H------HHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGGTTCC
T ss_pred H------HHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEeCChhhhCCCC
Confidence 6 67777774 7999999997543 2445678899999999999999987 66 7999999995543 3
Q ss_pred CCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH-------H----HHHHHHhhhh-h
Q psy17679 194 RERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI-------G----MLVGIATGVL-H 258 (303)
Q Consensus 194 ~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~-------~----~~~~~~~~~~-~ 258 (303)
..+++|+....| ...|..+|..+|.+++.+...+. ++++ ++++|||. . ++..+..+.. .
T Consensus 141 ~~~~~E~~~~~~---~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r---~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~ 214 (372)
T 1db3_A 141 EIPQKETTPFYP---RSPYAVAKLYAYWITVNYRESYGMYACNGI---LFNHESPRRGETFVTRKITRAIANIAQGLESC 214 (372)
T ss_dssp SSSBCTTSCCCC---CSHHHHHHHHHHHHHHHHHHHHCCCEEEEE---ECCEECTTSCTTSHHHHHHHHHHHHHTTSCCC
T ss_pred CCCCCccCCCCC---CChHHHHHHHHHHHHHHHHHHhCCCeEEEE---ECCccCCCCCCcchhhHHHHHHHHHHcCCCCc
Confidence 336677654444 45677888889999987765433 3333 45666653 1 2222333432 2
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..++.+++.++|+|++|+|++++.++.++.
T Consensus 215 ~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~ 244 (372)
T 1db3_A 215 LYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ 244 (372)
T ss_dssp EEESCTTCEECCEEHHHHHHHHHHTTSSSS
T ss_pred eeecCCCceeeeeEHHHHHHHHHHHHhcCC
Confidence 346778889999999999999999987654
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-24 Score=209.99 Aligned_cols=218 Identities=14% Similarity=0.084 Sum_probs=160.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
.+++|+|||||||||||++++++|++. |++ |++++|++..... + ....++.++.+|
T Consensus 312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~---V~~~~r~~~~~~~------~--------------~~~~~v~~v~~D 368 (660)
T 1z7e_A 312 ARRRTRVLILGVNGFIGNHLTERLLREDHYE---VYGLDIGSDAISR------F--------------LNHPHFHFVEGD 368 (660)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHHHSSSEE---EEEEESCCTTTGG------G--------------TTCTTEEEEECC
T ss_pred hccCceEEEEcCCcHHHHHHHHHHHhcCCCE---EEEEEcCchhhhh------h--------------ccCCceEEEECC
Confidence 356789999999999999999999998 776 9999998653210 0 002578999999
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CC
Q psy17679 120 CSLPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PR 194 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~ 194 (303)
+++.. +.+..+++++|+|||+||.... ..++...+++|+.++.++++++.+. + +||||+||.++.+ ..
T Consensus 369 l~d~~-----~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS~~vyg~~~~ 441 (660)
T 1z7e_A 369 ISIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSD 441 (660)
T ss_dssp TTTCH-----HHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCS
T ss_pred CCCcH-----HHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEecHHHcCCCCC
Confidence 99864 1266778899999999997652 3456778899999999999999998 6 8999999995543 33
Q ss_pred CccccCCCC---CC-CChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccCh-------------HHHHHHHHh
Q psy17679 195 ERIDEEFYP---VP-LKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGP-------------IGMLVGIAT 254 (303)
Q Consensus 195 ~~~~E~~~~---~~-~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~-------------~~~~~~~~~ 254 (303)
.+++|+... .| ..+...|..+|..+|.+++.+....+ +++|||.+.+.... ..++..+..
T Consensus 442 ~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (660)
T 1z7e_A 442 KYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE 521 (660)
T ss_dssp SSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHH
T ss_pred cccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHc
Confidence 456676532 22 24566788999999999987654322 78888755332210 123444455
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+....+++.+...++|+|++|+|++++.++.++.
T Consensus 522 g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~ 555 (660)
T 1z7e_A 522 GSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAG 555 (660)
T ss_dssp TCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGG
T ss_pred CCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCcc
Confidence 5555566777889999999999999999998764
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.8e-24 Score=190.90 Aligned_cols=216 Identities=15% Similarity=0.144 Sum_probs=148.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc-ccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG-KDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~-~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
|+||||||+||||++++++|++.|++ |++++|.... ....+.++.+. ..++.++.+|+++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~Dl~~~ 62 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHD---VIILDNLCNSKRSVLPVIERLG---------------GKHPTFVEGDIRNE 62 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCTTHHHHHHHHH---------------TSCCEEEECCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCE---EEEEecCCCcchhHHHHHHhhc---------------CCcceEEEccCCCH
Confidence 57999999999999999999999987 8888875432 12222221110 14678999999987
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCCc
Q psy17679 124 GLGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRER 196 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~~ 196 (303)
+ .+..+++ ++|+|||+||.... .......+++|+.++.++++++.+. +++||||+||.++.+ ...+
T Consensus 63 ~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~~~~ 135 (338)
T 1udb_A 63 A------LMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGDNPKIP 135 (338)
T ss_dssp H------HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCCSSS
T ss_pred H------HHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEccHHHhCCCCCCC
Confidence 6 6777776 59999999997542 2345678899999999999999887 789999999985543 3345
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC--c--EEeecceecCc-----cCh------H---HHHHHHHhhh--
Q psy17679 197 IDEEFYPVPLKYENLIQLISETGDEELSEMTPNR--V--HISGTGWIDNV-----YGP------I---GMLVGIATGV-- 256 (303)
Q Consensus 197 ~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~--~--~ii~pg~~~~~-----~g~------~---~~~~~~~~~~-- 256 (303)
++|+....| +...|..+|..+|.+++.+...+ . +++||+.+.+. +|+ . ..+.....+.
T Consensus 136 ~~e~~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 213 (338)
T 1udb_A 136 YVESFPTGT--PQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRD 213 (338)
T ss_dssp BCTTSCCCC--CSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSS
T ss_pred cCcccCCCC--CCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCC
Confidence 666543322 24567788899999998765433 2 67776433211 121 1 1222222221
Q ss_pred hhhccC------CCCccccceehhHHHHHHHHHHhhc
Q psy17679 257 LHTHLI------NLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 257 ~~~~~~------~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...+++ ++.+.++|||++|+|++++.++..+
T Consensus 214 ~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~ 250 (338)
T 1udb_A 214 SLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKL 250 (338)
T ss_dssp CEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHH
T ss_pred CcEEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhh
Confidence 122232 4567899999999999999999865
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-25 Score=187.41 Aligned_cols=196 Identities=19% Similarity=0.225 Sum_probs=148.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC-C
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL-P 123 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~ 123 (303)
|+|+||||+|++|+++++.|++.|++ |++++|++.... ...+++++.+|++| .
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~-----------------------~~~~~~~~~~D~~d~~ 54 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQ---IYAGARKVEQVP-----------------------QYNNVKAVHFDVDWTP 54 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCE---EEEEESSGGGSC-----------------------CCTTEEEEECCTTSCH
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCccchh-----------------------hcCCceEEEecccCCH
Confidence 58999999999999999999999987 999999864221 11589999999998 6
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCCCC
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYP 203 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~~ 203 (303)
+ ++.++++++|+|||+||.... ..+++|+.++.++++++++. +++|||++||.++.... +..|
T Consensus 55 ~------~~~~~~~~~d~vi~~ag~~~~-----~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~-~~~e---- 117 (219)
T 3dqp_A 55 E------EMAKQLHGMDAIINVSGSGGK-----SLLKVDLYGAVKLMQAAEKA-EVKRFILLSTIFSLQPE-KWIG---- 117 (219)
T ss_dssp H------HHHTTTTTCSEEEECCCCTTS-----SCCCCCCHHHHHHHHHHHHT-TCCEEEEECCTTTTCGG-GCCS----
T ss_pred H------HHHHHHcCCCEEEECCcCCCC-----CcEeEeHHHHHHHHHHHHHh-CCCEEEEECcccccCCC-cccc----
Confidence 5 788999999999999997542 36778999999999999998 88999999999765432 2333
Q ss_pred CCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHH
Q psy17679 204 VPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISI 283 (303)
Q Consensus 204 ~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~ 283 (303)
.+..+...|..+|..+|++++.......++++||++.+.... +.. ..+...++|++++|+|++++.+
T Consensus 118 ~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilrp~~v~g~~~~---------~~~----~~~~~~~~~i~~~Dva~~i~~~ 184 (219)
T 3dqp_A 118 AGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEEEAT---------GLI----DINDEVSASNTIGDVADTIKEL 184 (219)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEEECSEECSCCC---------SEE----EESSSCCCCEEHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHHhccCCcEEEEeCceEecCCCC---------Ccc----ccCCCcCCcccHHHHHHHHHHH
Confidence 233456788899999999996222222289999866433211 111 1136778999999999999999
Q ss_pred HhhcccCCcchhh
Q psy17679 284 AWSIGESGKVEKA 296 (303)
Q Consensus 284 ~~~~~~~~~~~~~ 296 (303)
+.++...+..+++
T Consensus 185 l~~~~~~g~~~~i 197 (219)
T 3dqp_A 185 VMTDHSIGKVISM 197 (219)
T ss_dssp HTCGGGTTEEEEE
T ss_pred HhCccccCcEEEe
Confidence 9987655544443
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=196.22 Aligned_cols=221 Identities=16% Similarity=0.090 Sum_probs=151.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCC-ceEEEEecCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRS-KVSAVAGDCSLP 123 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~-~v~~~~~Dl~d~ 123 (303)
|+||||||+||||+++++.|++.|++ |++++|+...... ..++.+.. ....... ++.++.+|++|.
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~---V~~~~r~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~~~~Dl~d~ 95 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYE---VHGLIRRSSNFNT-QRINHIYI---------DPHNVNKALMKLHYADLTDA 95 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCCC-TTTTTTC-----------------CCEEEEECCTTCH
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCE---EEEEecCCccccc-hhhhhhhh---------ccccccccceEEEECCCCCH
Confidence 68999999999999999999999987 9999997643100 00000000 0000012 788999999987
Q ss_pred CCCCCHHHHHHHhcc--ccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCc-----eEEEEeCCcccCC
Q psy17679 124 GLGLSETDRATLVKQ--VNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLK-----AFVHVSTAFTHCP 193 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~--~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~-----r~i~iSS~~~~~~ 193 (303)
+ .+..++++ +|+|||+||.... ..++...+++|+.++.++++++.+. +++ ||||+||.++++.
T Consensus 96 ~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~~v~~SS~~vyg~ 168 (381)
T 1n7h_A 96 S------SLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVKYYQAGSSEMFGS 168 (381)
T ss_dssp H------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEEEEGGGGTT
T ss_pred H------HHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccEEEEeCcHHHhCC
Confidence 6 67788774 6999999997654 2456778899999999999999987 555 9999999955432
Q ss_pred C-CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHH-----------HHHHHHhhhhh-hc
Q psy17679 194 R-ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIG-----------MLVGIATGVLH-TH 260 (303)
Q Consensus 194 ~-~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~-----------~~~~~~~~~~~-~~ 260 (303)
. .+++|+....| ...|..+|..+|.+++.+...++..+..+++.++|||.. ++..+..+... ..
T Consensus 169 ~~~~~~E~~~~~~---~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~ 245 (381)
T 1n7h_A 169 TPPPQSETTPFHP---RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLF 245 (381)
T ss_dssp SCSSBCTTSCCCC---CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEE
T ss_pred CCCCCCCCCCCCC---CCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEE
Confidence 1 16677654444 456778888899999887654331111123345565531 12223334322 24
Q ss_pred cCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 261 LINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 261 ~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
++.+...++|+|++|+|++++.++.++.
T Consensus 246 ~g~~~~~~~~v~v~Dva~a~~~~~~~~~ 273 (381)
T 1n7h_A 246 LGNLQASRDWGFAGDYVEAMWLMLQQEK 273 (381)
T ss_dssp ESCTTCEEECEEHHHHHHHHHHHHTSSS
T ss_pred eCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence 5777889999999999999999998654
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=190.11 Aligned_cols=191 Identities=20% Similarity=0.229 Sum_probs=146.7
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|||||||||||+++++.|++.|++ |++++|. .+|+.|.+
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r~------------------------------------~~D~~d~~ 46 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYD---IYPFDKK------------------------------------LLDITNIS 46 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEE---EEEECTT------------------------------------TSCTTCHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCE---EEEeccc------------------------------------ccCCCCHH
Confidence 58999999999999999999999987 9999883 36787765
Q ss_pred CCCCHHHHHHHhc--cccEEEEcceecccc---ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCCcc
Q psy17679 125 LGLSETDRATLVK--QVNIVFHGAATVRFD---EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRERI 197 (303)
Q Consensus 125 ~~~~~~~~~~~~~--~~dvVi~~a~~~~~~---~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~~~ 197 (303)
.+..+++ ++|+|||+|+..... .++...+++|+.++.++++++.+. ++ ||||+||.+++. ...++
T Consensus 47 ------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~vy~~~~~~~~ 118 (287)
T 3sc6_A 47 ------QVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDYVFQGDRPEGY 118 (287)
T ss_dssp ------HHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCCCCSSCB
T ss_pred ------HHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhhhcCCCCCCCC
Confidence 6788887 699999999987642 467788999999999999999998 66 799999995543 34578
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChH---HHHHHHHhhhhhhccCCCCccccceehh
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPI---GMLVGIATGVLHTHLINLNTVTDMVPVD 274 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 274 (303)
+|++...| ...|..+|..+|.+++.+...+ +++||+.+.+..... .++.....+....++ ++..++|+|++
T Consensus 119 ~E~~~~~p---~~~Y~~sK~~~E~~~~~~~~~~-~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~ 192 (287)
T 3sc6_A 119 DEFHNPAP---INIYGASKYAGEQFVKELHNKY-FIVRTSWLYGKYGNNFVKTMIRLGKEREEISVV--ADQIGSPTYVA 192 (287)
T ss_dssp CTTSCCCC---CSHHHHHHHHHHHHHHHHCSSE-EEEEECSEECSSSCCHHHHHHHHHTTCSEEEEE--CSCEECCEEHH
T ss_pred CCCCCCCC---CCHHHHHHHHHHHHHHHhCCCc-EEEeeeeecCCCCCcHHHHHHHHHHcCCCeEee--cCcccCceEHH
Confidence 88765544 4567778888999999887754 688886543322111 222333334444444 35889999999
Q ss_pred HHHHHHHHHHhhcc
Q psy17679 275 LVVNSMISIAWSIG 288 (303)
Q Consensus 275 D~a~ai~~~~~~~~ 288 (303)
|+|++++.++.++.
T Consensus 193 Dva~~~~~~~~~~~ 206 (287)
T 3sc6_A 193 DLNVMINKLIHTSL 206 (287)
T ss_dssp HHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999999775
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=193.84 Aligned_cols=222 Identities=17% Similarity=0.186 Sum_probs=145.7
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|+||||||+||||++++++|++.|++ |++++|+..... ++..+.. + +....+++++.+|++|
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~---V~~~~r~~~~~~---~~~~~~~------~----~~~~~~~~~~~~Dl~d 67 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYT---VRATVRDPTNVK---KVKHLLD------L----PKAETHLTLWKADLAD 67 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCTTCHH---HHHHHHT------S----TTHHHHEEEEECCTTS
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCE---EEEEECCcchhH---HHHHHHh------c----ccCCCeEEEEEcCCCC
Confidence 5689999999999999999999999987 888899764321 1111110 0 0001368899999999
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceecccc-cc-HHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC----CCCc
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFD-EH-IKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC----PRER 196 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~-~~-~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~----~~~~ 196 (303)
.+ ++..+++++|+|||+|+..... .+ ....+++|+.++.++++++.+.+.++||||+||..+.. ...+
T Consensus 68 ~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~ 141 (337)
T 2c29_D 68 EG------SFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPV 141 (337)
T ss_dssp TT------TTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSE
T ss_pred HH------HHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcc
Confidence 87 6788889999999999976432 22 23578999999999999999872389999999985321 1224
Q ss_pred cccCCCCCC------CChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH---HHHHHH---Hhhhhhhcc
Q psy17679 197 IDEEFYPVP------LKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI---GMLVGI---ATGVLHTHL 261 (303)
Q Consensus 197 ~~E~~~~~~------~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~---~~~~~~---~~~~~~~~~ 261 (303)
++|+.+... ..+...|..+|..+|.++..+....+ ++++|+.+.+..... ..+... ..+... .+
T Consensus 142 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~ 220 (337)
T 2c29_D 142 YDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA-HY 220 (337)
T ss_dssp ECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGG-GH
T ss_pred cCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCc-cc
Confidence 555543211 01334688899999999877653322 788887553322100 111111 222211 12
Q ss_pred CCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 262 INLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 262 ~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+.+ ....|+|++|+|++++.++.++.
T Consensus 221 ~~~-~~~~~i~v~Dva~a~~~~~~~~~ 246 (337)
T 2c29_D 221 SII-RQGQFVHLDDLCNAHIYLFENPK 246 (337)
T ss_dssp HHH-TEEEEEEHHHHHHHHHHHHHCTT
T ss_pred ccc-CCCCEEEHHHHHHHHHHHhcCcc
Confidence 111 12349999999999999997654
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.3e-24 Score=187.82 Aligned_cols=193 Identities=21% Similarity=0.214 Sum_probs=146.0
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|||||||||+|+++++.|+ .|++ |++++|++. ++.+|+.|.+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~---V~~~~r~~~--------------------------------~~~~D~~d~~ 44 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGN---LIALDVHSK--------------------------------EFCGDFSNPK 44 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSE---EEEECTTCS--------------------------------SSCCCTTCHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCe---EEEeccccc--------------------------------cccccCCCHH
Confidence 589999999999999999999 8887 999998641 3578988865
Q ss_pred CCCCHHHHHHHhcc--ccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCCcc
Q psy17679 125 LGLSETDRATLVKQ--VNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRERI 197 (303)
Q Consensus 125 ~~~~~~~~~~~~~~--~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~~~ 197 (303)
.+..++++ +|+|||+|+.... ..++...+++|+.++.++++++.+. ++ ||||+||.++++ ...++
T Consensus 45 ------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~vy~~~~~~~~ 116 (299)
T 1n2s_A 45 ------GVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDYVFPGTGDIPW 116 (299)
T ss_dssp ------HHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGGGSCCCTTCCB
T ss_pred ------HHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEecccEEeCCCCCCC
Confidence 68888875 9999999997653 3456788899999999999999987 66 899999995544 33467
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChH---HHHHHHHhhhhhhccCCCCccccceehh
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPI---GMLVGIATGVLHTHLINLNTVTDMVPVD 274 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 274 (303)
+|+....| ...|..+|..+|.+++.+.. ..+++||+.+.+..... .++.....+....++ ++..++|+|++
T Consensus 117 ~E~~~~~p---~~~Y~~sK~~~E~~~~~~~~-~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~ 190 (299)
T 1n2s_A 117 QETDATSP---LNVYGKTKLAGEKALQDNCP-KHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVI--NDQYGAPTGAE 190 (299)
T ss_dssp CTTSCCCC---SSHHHHHHHHHHHHHHHHCS-SEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEE--CSCEECCEEHH
T ss_pred CCCCCCCC---ccHHHHHHHHHHHHHHHhCC-CeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEee--cCcccCCeeHH
Confidence 77754444 44677888899999998875 33788887553322111 233333344433344 35789999999
Q ss_pred HHHHHHHHHHhhc
Q psy17679 275 LVVNSMISIAWSI 287 (303)
Q Consensus 275 D~a~ai~~~~~~~ 287 (303)
|+|++++.++.++
T Consensus 191 Dva~~~~~~~~~~ 203 (299)
T 1n2s_A 191 LLADCTAHAIRVA 203 (299)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999876
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.91 E-value=6.3e-24 Score=181.78 Aligned_cols=204 Identities=17% Similarity=0.111 Sum_probs=148.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCC--CccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCP--HLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~--~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
|++|+|+||||+|+||+++++.|++.|+ + |++++|++...... ...++.++.+|
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~---V~~~~r~~~~~~~~---------------------~~~~~~~~~~D 71 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSK---VTLIGRRKLTFDEE---------------------AYKNVNQEVVD 71 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSE---EEEEESSCCCCCSG---------------------GGGGCEEEECC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCE---EEEEEcCCCCcccc---------------------ccCCceEEecC
Confidence 5678999999999999999999999998 6 99999986532200 01468899999
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCcccc
Q psy17679 120 CSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDE 199 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E 199 (303)
++|.+ ++..+++++|+||||||.......+...+++|+.++.++++++.+. +.++||++||.++...
T Consensus 72 ~~d~~------~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~------ 138 (242)
T 2bka_A 72 FEKLD------DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKS------ 138 (242)
T ss_dssp GGGGG------GGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT------
T ss_pred cCCHH------HHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEccCcCCCC------
Confidence 99977 6788888999999999976544456778899999999999999987 7889999999966431
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHH
Q psy17679 200 EFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNS 279 (303)
Q Consensus 200 ~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a 279 (303)
+ ...|..+|...|.+++.+.....++++||++.+...................+. ......+++++|+|++
T Consensus 139 -----~---~~~Y~~sK~~~e~~~~~~~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~ 209 (242)
T 2bka_A 139 -----S---NFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPD-SWASGHSVPVVTVVRA 209 (242)
T ss_dssp -----C---SSHHHHHHHHHHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCT-TGGGGTEEEHHHHHHH
T ss_pred -----C---cchHHHHHHHHHHHHHhcCCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCc-cccCCcccCHHHHHHH
Confidence 1 235777888899999877543247999987754432111111111111111111 1112358999999999
Q ss_pred HHHHHhhcccCC
Q psy17679 280 MISIAWSIGESG 291 (303)
Q Consensus 280 i~~~~~~~~~~~ 291 (303)
++.++.++...+
T Consensus 210 ~~~~~~~~~~~~ 221 (242)
T 2bka_A 210 MLNNVVRPRDKQ 221 (242)
T ss_dssp HHHHHTSCCCSS
T ss_pred HHHHHhCccccC
Confidence 999999876543
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-24 Score=182.51 Aligned_cols=207 Identities=12% Similarity=0.004 Sum_probs=143.0
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||||||||||||++++++|++.|++ |++++|++. .+..+. ..+++++.+|++|.+
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~------~~~~~~---------------~~~~~~~~~D~~d~~ 56 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHE---VLAVVRDPQ------KAADRL---------------GATVATLVKEPLVLT 56 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHT---------------CTTSEEEECCGGGCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCE---EEEEEeccc------cccccc---------------CCCceEEeccccccc
Confidence 57999999999999999999999987 999999743 121111 158899999999987
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCC-----Ccccc
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPR-----ERIDE 199 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~-----~~~~E 199 (303)
. ..+.++|+|||+||...... ..+.|+.++.++++++++. + +|||++||..+.... ...++
T Consensus 57 ------~--~~~~~~d~vi~~ag~~~~~~----~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~~~~~~~~ 122 (224)
T 3h2s_A 57 ------E--ADLDSVDAVVDALSVPWGSG----RGYLHLDFATHLVSLLRNS-D-TLAVFILGSASLAMPGADHPMILDF 122 (224)
T ss_dssp ------H--HHHTTCSEEEECCCCCTTSS----CTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCSSCGGGGC
T ss_pred ------H--hhcccCCEEEECCccCCCcc----hhhHHHHHHHHHHHHHHHc-C-CcEEEEecceeeccCCCCccccccC
Confidence 4 77789999999999862211 2466999999999999998 6 999999998432211 12222
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhhC-cCCc--EEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHH
Q psy17679 200 EFYPVPLKYENLIQLISETGDEELSEMT-PNRV--HISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLV 276 (303)
Q Consensus 200 ~~~~~~~~~~~~~~~~k~~~E~~~~~~~-~~~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 276 (303)
..... +...|..+|...|.+ ..+. .... ++++||++.+. ++... +..+.. . +..+....++++++|+
T Consensus 123 ~~~~~---~~~~y~~sK~~~e~~-~~~~~~~~i~~~ivrp~~v~g~-~~~~~---~~~~~~-~-~~~~~~~~~~i~~~Dv 192 (224)
T 3h2s_A 123 PESAA---SQPWYDGALYQYYEY-QFLQMNANVNWIGISPSEAFPS-GPATS---YVAGKD-T-LLVGEDGQSHITTGNM 192 (224)
T ss_dssp CGGGG---GSTTHHHHHHHHHHH-HHHTTCTTSCEEEEEECSBCCC-CCCCC---EEEESS-B-CCCCTTSCCBCCHHHH
T ss_pred CCCCc---cchhhHHHHHHHHHH-HHHHhcCCCcEEEEcCccccCC-CcccC---ceeccc-c-cccCCCCCceEeHHHH
Confidence 22222 245577788888854 3333 2222 89999865433 21110 111111 1 1124456789999999
Q ss_pred HHHHHHHHhhcccCCcchhhccc
Q psy17679 277 VNSMISIAWSIGESGKVEKAINK 299 (303)
Q Consensus 277 a~ai~~~~~~~~~~~~~~~~~~~ 299 (303)
|++++.++.++...++.+++.+.
T Consensus 193 A~~~~~~l~~~~~~g~~~~~~~~ 215 (224)
T 3h2s_A 193 ALAILDQLEHPTAIRDRIVVRDA 215 (224)
T ss_dssp HHHHHHHHHSCCCTTSEEEEEEC
T ss_pred HHHHHHHhcCccccCCEEEEecC
Confidence 99999999998877777666443
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.6e-24 Score=189.53 Aligned_cols=220 Identities=20% Similarity=0.195 Sum_probs=143.1
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC-CCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR-PKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R-~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
+|+||||||+||||+++++.|++.|++ |++++| ++........+..+ +....++.++.+|++|
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~Dl~d 64 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYS---VNTTIRADPERKRDVSFLTNL-------------PGASEKLHFFNADLSN 64 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEECCCC----CCCHHHHTS-------------TTHHHHEEECCCCTTC
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCE---EEEEEeCCccchhHHHHHHhh-------------hccCCceEEEecCCCC
Confidence 478999999999999999999999987 888888 54211000111000 0001367889999999
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccccc-c-HHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC----CCCc
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFDE-H-IKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC----PRER 196 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~-~-~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~----~~~~ 196 (303)
.+ .+..+++++|+|||+|+...... + ....+++|+.++.++++++.+..+++||||+||.++.. ...+
T Consensus 65 ~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~ 138 (322)
T 2p4h_X 65 PD------SFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDV 138 (322)
T ss_dssp GG------GGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSE
T ss_pred HH------HHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCee
Confidence 77 68889999999999998653221 1 34588999999999999998863578999999985321 1224
Q ss_pred cccCCCCC-----CCChh-hHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH---HHHH---HHHhhhhhhcc
Q psy17679 197 IDEEFYPV-----PLKYE-NLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI---GMLV---GIATGVLHTHL 261 (303)
Q Consensus 197 ~~E~~~~~-----~~~~~-~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~---~~~~---~~~~~~~~~~~ 261 (303)
++|+.+.. |..+. ..|..+|.++|.++..+....+ ++++|+.+.+..... .... ....+.... +
T Consensus 139 ~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~-~ 217 (322)
T 2p4h_X 139 LDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQ-I 217 (322)
T ss_dssp ECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGG-C
T ss_pred cCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCcc-C
Confidence 55553221 11111 2588899999999887654322 788887664332110 1111 112332222 2
Q ss_pred CCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 262 INLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 262 ~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+. ..++|+|++|+|++++.++.++.
T Consensus 218 ~~--~~~~~i~v~Dva~a~~~~~~~~~ 242 (322)
T 2p4h_X 218 GV--TRFHMVHVDDVARAHIYLLENSV 242 (322)
T ss_dssp CE--EEEEEEEHHHHHHHHHHHHHSCC
T ss_pred cC--CCcCEEEHHHHHHHHHHHhhCcC
Confidence 21 33489999999999999997654
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-23 Score=203.94 Aligned_cols=223 Identities=16% Similarity=0.113 Sum_probs=153.8
Q ss_pred ccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCccc-HHHHHHHHHHhHHHhhhhccCcCcCCceEE
Q psy17679 37 PMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKD-IQERLDAIFEDRLFWRLRAEVPDFRSKVSA 115 (303)
Q Consensus 37 ~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~-~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~ 115 (303)
.+...+++|+||||||+||||++++++|++.|++ |++++|...... ..+.++.+. ..++.+
T Consensus 4 ~~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~l~~~~---------------~~~v~~ 65 (699)
T 1z45_A 4 QLQSESTSKIVLVTGGAGYIGSHTVVELIENGYD---CVVADNLSNSTYDSVARLEVLT---------------KHHIPF 65 (699)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCTHHHHHHHHHH---------------TSCCCE
T ss_pred ccccccCCCEEEEECCCCHHHHHHHHHHHHCcCE---EEEEECCCcchHHHHHHHhhcc---------------CCceEE
Confidence 3444567799999999999999999999999987 999998754322 122222111 157889
Q ss_pred EEecCCCCCCCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy17679 116 VAGDCSLPGLGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFT 190 (303)
Q Consensus 116 ~~~Dl~d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~ 190 (303)
+.+|+++.+ .+..+++ ++|+|||+|+.... .......+++|+.++.++++++.+. +++|||++||.++
T Consensus 66 v~~Dl~d~~------~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~~SS~~v 138 (699)
T 1z45_A 66 YEVDLCDRK------GLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATV 138 (699)
T ss_dssp EECCTTCHH------HHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGG
T ss_pred EEcCCCCHH------HHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECcHHH
Confidence 999999876 6788887 89999999997643 2334568899999999999999988 8899999999965
Q ss_pred cCCC------CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC---Cc--EEeecceecC-----ccCh------H--
Q psy17679 191 HCPR------ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN---RV--HISGTGWIDN-----VYGP------I-- 246 (303)
Q Consensus 191 ~~~~------~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~---~~--~ii~pg~~~~-----~~g~------~-- 246 (303)
.+.. .+++|+.... +...|..+|..+|.+++.+... .. +++||+.+.+ ++|+ .
T Consensus 139 yg~~~~~~~~~~~~E~~~~~---p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~ 215 (699)
T 1z45_A 139 YGDATRFPNMIPIPEECPLG---PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNL 215 (699)
T ss_dssp GCCGGGSTTCCSBCTTSCCC---CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSH
T ss_pred hCCCccccccCCccccCCCC---CCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHH
Confidence 4321 3455554333 4456778888999999876432 12 7788764432 2222 1
Q ss_pred -HHHHHHHhh--hhhhccC------CCCccccceehhHHHHHHHHHHhhc
Q psy17679 247 -GMLVGIATG--VLHTHLI------NLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 247 -~~~~~~~~~--~~~~~~~------~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
..+.....+ ....+++ .+...++|||++|+|++++.++..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~ 265 (699)
T 1z45_A 216 LPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYL 265 (699)
T ss_dssp HHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhh
Confidence 122233332 2233444 5678899999999999999998754
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.7e-24 Score=185.49 Aligned_cols=190 Identities=18% Similarity=0.135 Sum_probs=147.8
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+||||||+||||+++++.|++.|++ |++++|++.... ..++.++.+|++|.
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~------------------------~~~~~~~~~Dl~d~ 54 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHE---VRLSDIVDLGAA------------------------EAHEEIVACDLADA 54 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEE---EEECCSSCCCCC------------------------CTTEEECCCCTTCH
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCE---EEEEeCCCcccc------------------------CCCccEEEccCCCH
Confidence 468999999999999999999999876 999999764211 14678899999987
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC---CCCccccC
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC---PRERIDEE 200 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~---~~~~~~E~ 200 (303)
+ .+..+++++|+|||+|+.. ....+...+++|+.++.++++++.+. +++||||+||..+.. ...+++|+
T Consensus 55 ~------~~~~~~~~~d~vi~~a~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~~~~~~~E~ 126 (267)
T 3ay3_A 55 Q------AVHDLVKDCDGIIHLGGVS-VERPWNDILQANIIGAYNLYEAARNL-GKPRIVFASSNHTIGYYPRTTRIDTE 126 (267)
T ss_dssp H------HHHHHHTTCSEEEECCSCC-SCCCHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEEEEGGGSTTSBTTSCBCTT
T ss_pred H------HHHHHHcCCCEEEECCcCC-CCCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCHHHhCCCCCCCCCCCC
Confidence 6 7888999999999999976 33456788899999999999999987 889999999995543 23467777
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHH
Q psy17679 201 FYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVV 277 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 277 (303)
....| ...|..+|...|.+++.+..... ++++||.+.. ++ ..+...++|+|++|+|
T Consensus 127 ~~~~~---~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~--~~----------------~~~~~~~~~~~~~dva 185 (267)
T 3ay3_A 127 VPRRP---DSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFP--KP----------------KDARMMATWLSVDDFM 185 (267)
T ss_dssp SCCCC---CSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSS--SC----------------CSHHHHHHBCCHHHHH
T ss_pred CCCCC---CChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecC--CC----------------CCCCeeeccccHHHHH
Confidence 54444 44677788889999887654333 8999986531 11 1123457899999999
Q ss_pred HHHHHHHhhccc
Q psy17679 278 NSMISIAWSIGE 289 (303)
Q Consensus 278 ~ai~~~~~~~~~ 289 (303)
++++.++.++..
T Consensus 186 ~~~~~~~~~~~~ 197 (267)
T 3ay3_A 186 RLMKRAFVAPKL 197 (267)
T ss_dssp HHHHHHHHSSCC
T ss_pred HHHHHHHhCCCC
Confidence 999999987643
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-24 Score=193.39 Aligned_cols=221 Identities=17% Similarity=0.149 Sum_probs=141.8
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+||||||+||||++|++.|++.|++ |++++|+.........+..+ . ...++.++.+|++|.
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~---V~~~~r~~~~~~~~~~~~~~-~-------------~~~~~~~~~~Dl~d~ 71 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYA---VNTTVRDPDNQKKVSHLLEL-Q-------------ELGDLKIFRADLTDE 71 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCE---EEEEESCTTCTTTTHHHHHH-G-------------GGSCEEEEECCTTTS
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCE---EEEEEcCcchhhhHHHHHhc-C-------------CCCcEEEEecCCCCh
Confidence 689999999999999999999999997 88888976432211111111 0 014788999999998
Q ss_pred CCCCCHHHHHHHhccccEEEEcceecccc-ccH-HHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcc---cC---CCC
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRFD-EHI-KMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFT---HC---PRE 195 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~~-~~~-~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~---~~---~~~ 195 (303)
+ .+..+++++|+|||+|+..... .+. ...+++|+.++.+++++|.+.++++||||+||..+ .. ...
T Consensus 72 ~------~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~ 145 (338)
T 2rh8_A 72 L------SFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGL 145 (338)
T ss_dssp S------SSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCC
T ss_pred H------HHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCc
Confidence 7 5788889999999999975432 222 34789999999999999998733899999999842 11 112
Q ss_pred ccccCCCCC-----CCCh-hhHHHHHHHHHHHHHHhhCcCC-c--EEeecceecCccCh---HHHHH---HHHhhhhhhc
Q psy17679 196 RIDEEFYPV-----PLKY-ENLIQLISETGDEELSEMTPNR-V--HISGTGWIDNVYGP---IGMLV---GIATGVLHTH 260 (303)
Q Consensus 196 ~~~E~~~~~-----~~~~-~~~~~~~k~~~E~~~~~~~~~~-~--~ii~pg~~~~~~g~---~~~~~---~~~~~~~~~~ 260 (303)
+++|+.+.. |..+ ...|..+|..+|.++..+.... . ++++|+.+.+.... ...+. ....+... .
T Consensus 146 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~ 224 (338)
T 2rh8_A 146 VVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEF-L 224 (338)
T ss_dssp CCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHH-H
T ss_pred ccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc-c
Confidence 566664321 1111 1136677778898887765432 2 78888755332210 01111 11222211 1
Q ss_pred cCC------CCccccceehhHHHHHHHHHHhhcc
Q psy17679 261 LIN------LNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 261 ~~~------~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
++. +...++|+|++|+|++++.++.++.
T Consensus 225 ~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 258 (338)
T 2rh8_A 225 INGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKES 258 (338)
T ss_dssp HHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTT
T ss_pred cccccccccccCcccEEEHHHHHHHHHHHHcCCC
Confidence 110 1123489999999999999997654
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=184.03 Aligned_cols=192 Identities=18% Similarity=0.166 Sum_probs=144.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
...|+|||||||||||+++++.|++.|++ |++++|+ .+|++
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~------------------------------------~~Dl~ 50 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKGKNVE---VIPTDVQ------------------------------------DLDIT 50 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTTSSEE---EEEECTT------------------------------------TCCTT
T ss_pred cccceEEEECCCChHHHHHHHHHHhCCCe---EEeccCc------------------------------------cCCCC
Confidence 34589999999999999999999999987 8898884 26777
Q ss_pred CCCCCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC--C
Q psy17679 122 LPGLGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP--R 194 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~--~ 194 (303)
|.+ .+..+++ ++|+|||+||.... ..++...+++|+.++.++++++.+. ++ ||||+||.++... .
T Consensus 51 d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~v~~~~~~ 122 (292)
T 1vl0_A 51 NVL------AVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDYVFDGEAK 122 (292)
T ss_dssp CHH------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCSCCS
T ss_pred CHH------HHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHHeECCCCC
Confidence 765 6778887 79999999997653 2456788999999999999999998 66 9999999955443 3
Q ss_pred CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChH---HHHHHHHhhhhhhccCCCCccccce
Q psy17679 195 ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPI---GMLVGIATGVLHTHLINLNTVTDMV 271 (303)
Q Consensus 195 ~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~i 271 (303)
.+++|+....| ...|..+|..+|.+++.+... .+++||+.+.+. +.. .++.....+....++ ++..++|+
T Consensus 123 ~~~~E~~~~~~---~~~Y~~sK~~~E~~~~~~~~~-~~~lR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i 195 (292)
T 1vl0_A 123 EPITEFDEVNP---QSAYGKTKLEGENFVKALNPK-YYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVV--HDQVGTPT 195 (292)
T ss_dssp SCBCTTSCCCC---CSHHHHHHHHHHHHHHHHCSS-EEEEEECSEESS-SSCHHHHHHHHHHHCSEEEEE--SSCEECCE
T ss_pred CCCCCCCCCCC---ccHHHHHHHHHHHHHHhhCCC-eEEEeeeeeeCC-CcChHHHHHHHHhcCCcEEee--cCeeeCCc
Confidence 46777765444 446778888999999988654 368888655433 211 122222334333334 35778999
Q ss_pred ehhHHHHHHHHHHhhc
Q psy17679 272 PVDLVVNSMISIAWSI 287 (303)
Q Consensus 272 ~v~D~a~ai~~~~~~~ 287 (303)
|++|+|++++.++.++
T Consensus 196 ~v~Dva~~~~~~~~~~ 211 (292)
T 1vl0_A 196 STVDLARVVLKVIDEK 211 (292)
T ss_dssp EHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHhcC
Confidence 9999999999999875
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.8e-24 Score=178.42 Aligned_cols=206 Identities=9% Similarity=-0.028 Sum_probs=130.0
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||||||||||||+++++.|+++|++ |++++|++.. ++.+ ..+++++.+|++|.+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~------~~~~----------------~~~~~~~~~D~~d~~ 55 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHE---VTAIVRNAGK------ITQT----------------HKDINILQKDIFDLT 55 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCSHH------HHHH----------------CSSSEEEECCGGGCC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCE---EEEEEcCchh------hhhc----------------cCCCeEEeccccChh
Confidence 57999999999999999999999987 9999998532 1111 157899999999987
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC---CCccccCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP---RERIDEEF 201 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~---~~~~~E~~ 201 (303)
. ..+.++|+|||+||.... ..+.|+.++.++++++++. +++|||++||..+... ..+..|+.
T Consensus 56 ------~--~~~~~~d~vi~~ag~~~~------~~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~ 120 (221)
T 3ew7_A 56 ------L--SDLSDQNVVVDAYGISPD------EAEKHVTSLDHLISVLNGT-VSPRLLVVGGAASLQIDEDGNTLLESK 120 (221)
T ss_dssp ------H--HHHTTCSEEEECCCSSTT------TTTSHHHHHHHHHHHHCSC-CSSEEEEECCCC---------------
T ss_pred ------h--hhhcCCCEEEECCcCCcc------ccchHHHHHHHHHHHHHhc-CCceEEEEecceEEEcCCCCccccccC
Confidence 3 777899999999997432 2456999999999999998 7899999999854322 11334443
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHhhC-cCCc--EEeecceecCccChHHHHHHHHh-hhhhhccCCCCccccceehhHHH
Q psy17679 202 YPVPLKYENLIQLISETGDEELSEMT-PNRV--HISGTGWIDNVYGPIGMLVGIAT-GVLHTHLINLNTVTDMVPVDLVV 277 (303)
Q Consensus 202 ~~~~~~~~~~~~~~k~~~E~~~~~~~-~~~~--~ii~pg~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a 277 (303)
...|...|. .+|...|.+..... .... ++++||++. |+......+.. +....+.+. ...+++++|+|
T Consensus 121 ~~~~~~~y~---~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~---g~~~~~~~~~~~~~~~~~~~~---~~~~i~~~Dva 191 (221)
T 3ew7_A 121 GLREAPYYP---TARAQAKQLEHLKSHQAEFSWTYISPSAMF---EPGERTGDYQIGKDHLLFGSD---GNSFISMEDYA 191 (221)
T ss_dssp ----CCCSC---CHHHHHHHHHHHHTTTTTSCEEEEECSSCC---CCC------------------------CCCHHHHH
T ss_pred CCCCHHHHH---HHHHHHHHHHHHHhhccCccEEEEeCccee---cCCCccCceEeccccceecCC---CCceEeHHHHH
Confidence 333444444 44555666522221 2222 899998654 33211111111 111122222 23689999999
Q ss_pred HHHHHHHhhcccCCcchhhccc
Q psy17679 278 NSMISIAWSIGESGKVEKAINK 299 (303)
Q Consensus 278 ~ai~~~~~~~~~~~~~~~~~~~ 299 (303)
++++.++.++...++.+++.+.
T Consensus 192 ~~~~~~l~~~~~~g~~~~~~~~ 213 (221)
T 3ew7_A 192 IAVLDEIERPNHLNEHFTVAGK 213 (221)
T ss_dssp HHHHHHHHSCSCTTSEEECCC-
T ss_pred HHHHHHHhCccccCCEEEECCC
Confidence 9999999998877776665443
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.4e-23 Score=185.42 Aligned_cols=204 Identities=14% Similarity=0.115 Sum_probs=148.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCccc-HHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKD-IQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~-~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
|.+|+|||||||||+|++|++.|++.|++ |++++|+++... ....++.+.. .+++++.+|+
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~~~~~~~~~~l~~---------------~~v~~~~~Dl 69 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRP---TYILARPGPRSPSKAKIFKALED---------------KGAIIVYGLI 69 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCC---EEEEECSSCCCHHHHHHHHHHHH---------------TTCEEEECCT
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCC---EEEEECCCCCChhHHHHHHHHHh---------------CCcEEEEeec
Confidence 55689999999999999999999999987 999999863322 2222222221 6899999999
Q ss_pred CCCCCCCCHHHHHHHhc--cccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCC-CceEEEEeCCcccCCCCcc
Q psy17679 121 SLPGLGLSETDRATLVK--QVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKD-LKAFVHVSTAFTHCPRERI 197 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~-~~r~i~iSS~~~~~~~~~~ 197 (303)
+|.+ ++..+++ ++|+|||+++.. |+.++.+++++|++. + ++|||+ |.|+.. .
T Consensus 70 ~d~~------~l~~~~~~~~~d~Vi~~a~~~------------n~~~~~~l~~aa~~~-g~v~~~v~--S~~g~~----~ 124 (346)
T 3i6i_A 70 NEQE------AMEKILKEHEIDIVVSTVGGE------------SILDQIALVKAMKAV-GTIKRFLP--SEFGHD----V 124 (346)
T ss_dssp TCHH------HHHHHHHHTTCCEEEECCCGG------------GGGGHHHHHHHHHHH-CCCSEEEC--SCCSSC----T
T ss_pred CCHH------HHHHHHhhCCCCEEEECCchh------------hHHHHHHHHHHHHHc-CCceEEee--cccCCC----C
Confidence 9876 7899999 999999999962 778889999999998 6 999986 444432 2
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHH--HhhhhhhccCCCCccccceehhH
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGI--ATGVLHTHLINLNTVTDMVPVDL 275 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~D 275 (303)
+|. .+..+...|..+|+.+|++++...-. .++++||++.+.+.+....... ..+....++++++..++|+|++|
T Consensus 125 ~e~---~~~~p~~~y~~sK~~~e~~l~~~g~~-~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~D 200 (346)
T 3i6i_A 125 NRA---DPVEPGLNMYREKRRVRQLVEESGIP-FTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTD 200 (346)
T ss_dssp TTC---CCCTTHHHHHHHHHHHHHHHHHTTCC-BEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHH
T ss_pred Ccc---CcCCCcchHHHHHHHHHHHHHHcCCC-EEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHH
Confidence 232 23455667888899999999874322 2899999887765443211111 12333456788888999999999
Q ss_pred HHHHHHHHHhhcccCCc
Q psy17679 276 VVNSMISIAWSIGESGK 292 (303)
Q Consensus 276 ~a~ai~~~~~~~~~~~~ 292 (303)
+|++++.++.++...+.
T Consensus 201 va~~~~~~l~~~~~~~~ 217 (346)
T 3i6i_A 201 IGKFTMKTVDDVRTLNK 217 (346)
T ss_dssp HHHHHHHHTTCGGGTTE
T ss_pred HHHHHHHHHhCccccCe
Confidence 99999999998754433
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.1e-23 Score=180.47 Aligned_cols=192 Identities=13% Similarity=0.072 Sum_probs=138.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+|||||| ||+|+++++.|++.|++ |++++|++..... +.. .+++++.+|+.|.
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~------~~~---------------~~~~~~~~D~~d~ 59 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWR---IIGTSRNPDQMEA------IRA---------------SGAEPLLWPGEEP 59 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCE---EEEEESCGGGHHH------HHH---------------TTEEEEESSSSCC
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCE---EEEEEcChhhhhh------Hhh---------------CCCeEEEeccccc
Confidence 478999998 99999999999999987 9999998643211 111 5799999999983
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeCCccc--CCCCccccC
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVSTAFTH--CPRERIDEE 200 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS~~~~--~~~~~~~E~ 200 (303)
+ +.++|+|||+|+....... .+.++++++.+. .+++||||+||.+++ ....+++|+
T Consensus 60 -------~----~~~~d~vi~~a~~~~~~~~----------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~ 118 (286)
T 3ius_A 60 -------S----LDGVTHLLISTAPDSGGDP----------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDET 118 (286)
T ss_dssp -------C----CTTCCEEEECCCCBTTBCH----------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTT
T ss_pred -------c----cCCCCEEEECCCccccccH----------HHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCC
Confidence 2 6789999999997644321 236788888873 278999999999544 344467787
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHH-HHHHHHhhhhhhccCCCCccccceehhHHHHH
Q psy17679 201 FYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIG-MLVGIATGVLHTHLINLNTVTDMVPVDLVVNS 279 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a 279 (303)
....|. ..|..+|+.+|++++.+.....+++||+.+ ||+.. .+..+..+....+.+ +++.++|+|++|+|++
T Consensus 119 ~~~~p~---~~Y~~sK~~~E~~~~~~~~~~~~ilRp~~v---~G~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~a 191 (286)
T 3ius_A 119 TPLTPT---AARGRWRVMAEQQWQAVPNLPLHVFRLAGI---YGPGRGPFSKLGKGGIRRIIK-PGQVFSRIHVEDIAQV 191 (286)
T ss_dssp SCCCCC---SHHHHHHHHHHHHHHHSTTCCEEEEEECEE---EBTTBSSSTTSSSSCCCEEEC-TTCCBCEEEHHHHHHH
T ss_pred CCCCCC---CHHHHHHHHHHHHHHhhcCCCEEEEeccce---ECCCchHHHHHhcCCccccCC-CCcccceEEHHHHHHH
Confidence 655544 467788888999999881112278888754 55432 122233344334443 3678999999999999
Q ss_pred HHHHHhhcc
Q psy17679 280 MISIAWSIG 288 (303)
Q Consensus 280 i~~~~~~~~ 288 (303)
++.++.++.
T Consensus 192 ~~~~~~~~~ 200 (286)
T 3ius_A 192 LAASMARPD 200 (286)
T ss_dssp HHHHHHSCC
T ss_pred HHHHHhCCC
Confidence 999999876
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.5e-23 Score=183.97 Aligned_cols=198 Identities=15% Similarity=0.108 Sum_probs=123.4
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+|||||||||||+++++.|++.|++ |++++|+... .+ ++.+|+++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~---------------------------~~--~~~~Dl~d~ 49 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWH---AVGCGFRRAR---------------------------PK--FEQVNLLDS 49 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCE---EEEEC---------------------------------------------
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCe---EEEEccCCCC---------------------------CC--eEEecCCCH
Confidence 478999999999999999999999987 9999986431 12 678999987
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC-CCcc
Q psy17679 124 GLGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP-RERI 197 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~-~~~~ 197 (303)
+ .+..+++ ++|+|||+||.... ..++...+++|+.++.++++++.+. ++ ||||+||.++... ..++
T Consensus 50 ~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~~~~~~~~ 121 (315)
T 2ydy_A 50 N------AVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDYVFDGTNPPY 121 (315)
T ss_dssp --------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHH-TC-EEEEEEEGGGSCSSSCSB
T ss_pred H------HHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHHHcCCCCCCC
Confidence 6 5677776 49999999997643 3456678899999999999999997 65 9999999965443 3467
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccCh---H---HHHHHHH-hhhhhhccCCCCccccc
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGP---I---GMLVGIA-TGVLHTHLINLNTVTDM 270 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~---~---~~~~~~~-~~~~~~~~~~~~~~~~~ 270 (303)
+|+....| ...|..+|..+|.+++.+.... +++||+.+.+.... . .++.... .+....+ .+...++|
T Consensus 122 ~E~~~~~~---~~~Y~~sK~~~e~~~~~~~~~~-~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 195 (315)
T 2ydy_A 122 REEDIPAP---LNLYGKTKLDGEKAVLENNLGA-AVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANM--DHWQQRFP 195 (315)
T ss_dssp CTTSCCCC---CSHHHHHHHHHHHHHHHHCTTC-EEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEE--ECSSBBCC
T ss_pred CCCCCCCC---cCHHHHHHHHHHHHHHHhCCCe-EEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeee--ccCceECc
Confidence 77654444 4567788888999999876443 68887644322211 0 1223333 3332222 24677899
Q ss_pred eehhHHHHHHHHHHhhc
Q psy17679 271 VPVDLVVNSMISIAWSI 287 (303)
Q Consensus 271 i~v~D~a~ai~~~~~~~ 287 (303)
+|++|+|++++.++.++
T Consensus 196 i~v~Dva~a~~~~~~~~ 212 (315)
T 2ydy_A 196 THVKDVATVCRQLAEKR 212 (315)
T ss_dssp EEHHHHHHHHHHHHHHH
T ss_pred EEHHHHHHHHHHHHHhh
Confidence 99999999999999865
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.9e-23 Score=179.90 Aligned_cols=198 Identities=13% Similarity=0.076 Sum_probs=131.6
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||||||||||||++|++.|+++||+ |++++|++.. .. +..|.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~---V~~l~R~~~~---------------------------~~---~~~~~---- 43 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHE---VTLVSRKPGP---------------------------GR---ITWDE---- 43 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCT---------------------------TE---EEHHH----
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCCCc---------------------------Ce---eecch----
Confidence 68999999999999999999999998 9999997541 11 22221
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhcC-CCceEEEEeCCc--ccCCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREMK-DLKAFVHVSTAF--THCPR 194 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~~-~~~r~i~iSS~~--~~~~~ 194 (303)
.....++++|+|||+|+..-. ......+++.|+.++.+|++++...+ +..+||+.||.+ +....
T Consensus 44 ------~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~ 117 (298)
T 4b4o_A 44 ------LAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLT 117 (298)
T ss_dssp ------HHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSS
T ss_pred ------hhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCC
Confidence 123456789999999985311 12235678889999999999998872 344588888884 44445
Q ss_pred CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc--EEeecceecCccChHH----HHHHHHhhhhhhccCCCCccc
Q psy17679 195 ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV--HISGTGWIDNVYGPIG----MLVGIATGVLHTHLINLNTVT 268 (303)
Q Consensus 195 ~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~ 268 (303)
.+.+|+....+.+.+...+ ...|..... ..... .+++|+. +|||.. .+...........++.+++.+
T Consensus 118 ~~~~E~~p~~~~~~~~~~~---~~~e~~~~~-~~~~~~~~~~r~~~---v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~ 190 (298)
T 4b4o_A 118 AEYDEDSPGGDFDFFSNLV---TKWEAAARL-PGDSTRQVVVRSGV---VLGRGGGAMGHMLLPFRLGLGGPIGSGHQFF 190 (298)
T ss_dssp CCBCTTCCCSCSSHHHHHH---HHHHHHHCC-SSSSSEEEEEEECE---EECTTSHHHHHHHHHHHTTCCCCBTTSCSBC
T ss_pred CcccccCCccccchhHHHH---HHHHHHHHh-hccCCceeeeeeee---EEcCCCCchhHHHHHHhcCCcceecccCcee
Confidence 5677776555554444332 223333222 22222 5677754 455532 122222222234568899999
Q ss_pred cceehhHHHHHHHHHHhhcccCCc
Q psy17679 269 DMVPVDLVVNSMISIAWSIGESGK 292 (303)
Q Consensus 269 ~~i~v~D~a~ai~~~~~~~~~~~~ 292 (303)
+|||++|+|++++.++.++...+.
T Consensus 191 ~~ihv~Dva~a~~~~~~~~~~~g~ 214 (298)
T 4b4o_A 191 PWIHIGDLAGILTHALEANHVHGV 214 (298)
T ss_dssp CEEEHHHHHHHHHHHHHCTTCCEE
T ss_pred ecCcHHHHHHHHHHHHhCCCCCCe
Confidence 999999999999999998765553
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.90 E-value=9.9e-23 Score=178.62 Aligned_cols=192 Identities=15% Similarity=0.179 Sum_probs=140.1
Q ss_pred cEEEEeCCcchhHHHHHHHHHhc--CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRS--CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~--g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
|+|||||||||+|+++++.|++. |++ |++++|++..... +.. .+++++.+|++|
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~~~------l~~---------------~~~~~~~~D~~d 56 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQ---IIAIVRNVEKAST------LAD---------------QGVEVRHGDYNQ 56 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGG---EEEEESCTTTTHH------HHH---------------TTCEEEECCTTC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCe---EEEEEcCHHHHhH------Hhh---------------cCCeEEEeccCC
Confidence 57999999999999999999998 887 9999997653221 110 478899999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFY 202 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~ 202 (303)
.+ .+..+++++|+|||+|+.. .. . ++|+.++.++++++.+. +++||||+||.++..
T Consensus 57 ~~------~l~~~~~~~d~vi~~a~~~-~~---~---~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~---------- 112 (287)
T 2jl1_A 57 PE------SLQKAFAGVSKLLFISGPH-YD---N---TLLIVQHANVVKAARDA-GVKHIAYTGYAFAEE---------- 112 (287)
T ss_dssp HH------HHHHHTTTCSEEEECCCCC-SC---H---HHHHHHHHHHHHHHHHT-TCSEEEEEEETTGGG----------
T ss_pred HH------HHHHHHhcCCEEEEcCCCC-cC---c---hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCC----------
Confidence 76 7889999999999999963 11 1 56999999999999998 889999999996531
Q ss_pred CCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHh-hhhhhccCCCCccccceehhHHHHHHH
Q psy17679 203 PVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIAT-GVLHTHLINLNTVTDMVPVDLVVNSMI 281 (303)
Q Consensus 203 ~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~ai~ 281 (303)
.| ..|..+|..+|++++... -..+++|||.+.+..-+ .++..... +.. .++.++..++|+|++|+|++++
T Consensus 113 -~~----~~y~~~K~~~E~~~~~~~-~~~~ilrp~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~i~~~Dva~~~~ 183 (287)
T 2jl1_A 113 -SI----IPLAHVHLATEYAIRTTN-IPYTFLRNALYTDFFVN-EGLRASTESGAI--VTNAGSGIVNSVTRNELALAAA 183 (287)
T ss_dssp -CC----STHHHHHHHHHHHHHHTT-CCEEEEEECCBHHHHSS-GGGHHHHHHTEE--EESCTTCCBCCBCHHHHHHHHH
T ss_pred -CC----CchHHHHHHHHHHHHHcC-CCeEEEECCEeccccch-hhHHHHhhCCce--eccCCCCccCccCHHHHHHHHH
Confidence 11 146778888999987532 12278998754322101 12222222 322 2445677889999999999999
Q ss_pred HHHhhcccCCcc
Q psy17679 282 SIAWSIGESGKV 293 (303)
Q Consensus 282 ~~~~~~~~~~~~ 293 (303)
.++.++...+..
T Consensus 184 ~~~~~~~~~g~~ 195 (287)
T 2jl1_A 184 TVLTEEGHENKT 195 (287)
T ss_dssp HHHTSSSCTTEE
T ss_pred HHhcCCCCCCcE
Confidence 999876444433
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.7e-23 Score=196.25 Aligned_cols=201 Identities=16% Similarity=0.141 Sum_probs=140.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+|||||||||||++|++.|++.|++ |++++|+.... ..+.+|+.+.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~---V~~l~R~~~~~-----------------------------~~v~~d~~~~ 194 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHE---VIQLVRKEPKP-----------------------------GKRFWDPLNP 194 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESSSCCT-----------------------------TCEECCTTSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCCCCc-----------------------------cceeecccch
Confidence 689999999999999999999999987 99999986421 1367787753
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccc----cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC---CCCc
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRF----DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC---PRER 196 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~----~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~---~~~~ 196 (303)
. ..+++++|+|||+|+.... ......++++|+.++.++++++....++++|||+||.++++ ...+
T Consensus 195 ~--------~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~ 266 (516)
T 3oh8_A 195 A--------SDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEI 266 (516)
T ss_dssp C--------TTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEE
T ss_pred h--------HHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCc
Confidence 2 4556799999999997532 33456788999999999999944443889999999985544 2335
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc--EEeecceecCccChHH-HHHHH---HhhhhhhccCCCCccccc
Q psy17679 197 IDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV--HISGTGWIDNVYGPIG-MLVGI---ATGVLHTHLINLNTVTDM 270 (303)
Q Consensus 197 ~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~~~~~g~~~-~~~~~---~~~~~~~~~~~~~~~~~~ 270 (303)
++|+... +.. .|...|...|........... +++|||.+ |||.. .+..+ ........++.+.+.++|
T Consensus 267 ~~E~~~~-~~~---~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v---~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~ 339 (516)
T 3oh8_A 267 LTEESES-GDD---FLAEVCRDWEHATAPASDAGKRVAFIRTGVA---LSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSW 339 (516)
T ss_dssp ECTTSCC-CSS---HHHHHHHHHHHTTHHHHHTTCEEEEEEECEE---EBTTBSHHHHHHHTTC---CCCCTTSCCEECE
T ss_pred cCCCCCC-CcC---hHHHHHHHHHHHHHHHHhCCCCEEEEEeeEE---ECCCCChHHHHHHHHHhCCCcccCCCCceEce
Confidence 6776543 333 344455555665544433333 78888755 55431 22222 121222356778899999
Q ss_pred eehhHHHHHHHHHHhhcccCC
Q psy17679 271 VPVDLVVNSMISIAWSIGESG 291 (303)
Q Consensus 271 i~v~D~a~ai~~~~~~~~~~~ 291 (303)
||++|+|++++.++.++...+
T Consensus 340 i~v~Dva~ai~~~l~~~~~~g 360 (516)
T 3oh8_A 340 IAIDDLTDIYYRAIVDAQISG 360 (516)
T ss_dssp EEHHHHHHHHHHHHHCTTCCE
T ss_pred EeHHHHHHHHHHHHhCcccCC
Confidence 999999999999998775433
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-22 Score=181.98 Aligned_cols=212 Identities=15% Similarity=0.101 Sum_probs=148.4
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcC-----CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSC-----PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g-----~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
+|+|||||||||||+++++.|++.| ++ |++++|++.... ....+++++.+
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~---V~~~~r~~~~~~----------------------~~~~~~~~~~~ 55 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWK---VYGVARRTRPAW----------------------HEDNPINYVQC 55 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEE---EEEEESSCCCSC----------------------CCSSCCEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceE---EEEEeCCCCccc----------------------cccCceEEEEe
Confidence 4789999999999999999999998 66 999999865321 00257889999
Q ss_pred cCCCCCCCCCHHHHHHHhcc---ccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcC-CCceEE-------EEeC
Q psy17679 119 DCSLPGLGLSETDRATLVKQ---VNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMK-DLKAFV-------HVST 187 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~~---~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~-~~~r~i-------~iSS 187 (303)
|++|.+ ++..++++ +|+|||+|+... .++...+++|+.++.+++++|.+.+ +++||| |+||
T Consensus 56 Dl~d~~------~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss 127 (364)
T 2v6g_A 56 DISDPD------DSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGP 127 (364)
T ss_dssp CTTSHH------HHHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCC
T ss_pred ecCCHH------HHHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEec
Confidence 999876 68888887 999999999763 4567788999999999999999862 578997 7888
Q ss_pred CcccCC----CCccccCCCCCC-CChhhHHHHHHHHHHHHHHhhCcCC--c--EEeecceecCccChH--H------HHH
Q psy17679 188 AFTHCP----RERIDEEFYPVP-LKYENLIQLISETGDEELSEMTPNR--V--HISGTGWIDNVYGPI--G------MLV 250 (303)
Q Consensus 188 ~~~~~~----~~~~~E~~~~~~-~~~~~~~~~~k~~~E~~~~~~~~~~--~--~ii~pg~~~~~~g~~--~------~~~ 250 (303)
.++.+. ..+++|+....| ..+| + .+|+++..+.... . +++||+.+.+..... . +..
T Consensus 128 ~~vyg~~~~~~~~~~E~~~~~~~~~~y--~-----~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~ 200 (364)
T 2v6g_A 128 FESYGKIESHDPPYTEDLPRLKYMNFY--Y-----DLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYA 200 (364)
T ss_dssp GGGTTTSCCCCSSBCTTSCCCSSCCHH--H-----HHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHH
T ss_pred hhhccccccCCCCCCccccCCccchhh--H-----HHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHH
Confidence 854432 246777765444 3334 2 2577777664322 2 788886553322111 1 122
Q ss_pred HH--HhhhhhhccCCC---CccccceehhHHHHHHHHHHhhcccCCcchh
Q psy17679 251 GI--ATGVLHTHLINL---NTVTDMVPVDLVVNSMISIAWSIGESGKVEK 295 (303)
Q Consensus 251 ~~--~~~~~~~~~~~~---~~~~~~i~v~D~a~ai~~~~~~~~~~~~~~~ 295 (303)
.+ ..+....+++++ ...+++++++|+|++++.++.++...+..++
T Consensus 201 ~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~n 250 (364)
T 2v6g_A 201 AICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFN 250 (364)
T ss_dssp HHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEE
T ss_pred HHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCCCCCceEE
Confidence 22 134444446555 3447788889999999999987654443333
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6.6e-22 Score=164.68 Aligned_cols=196 Identities=15% Similarity=0.089 Sum_probs=140.5
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+|+|+||||+|++|++++++|++.|++ |++++|++.... .....++.++.+|++|
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~---V~~~~r~~~~~~---------------------~~~~~~~~~~~~D~~~ 57 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAGYE---VTVLVRDSSRLP---------------------SEGPRPAHVVVGDVLQ 57 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCGGGSC---------------------SSSCCCSEEEESCTTS
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCe---EEEEEeChhhcc---------------------cccCCceEEEEecCCC
Confidence 3478999999999999999999999987 999999754221 0002578999999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFY 202 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~ 202 (303)
.+ ++.++++++|+|||+++...... ..++|+.++.++++++.+. +++|||++||.++......
T Consensus 58 ~~------~~~~~~~~~d~vi~~a~~~~~~~----~~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~~~~~~~~------ 120 (206)
T 1hdo_A 58 AA------DVDKTVAGQDAVIVLLGTRNDLS----PTTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPTK------ 120 (206)
T ss_dssp HH------HHHHHHTTCSEEEECCCCTTCCS----CCCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTTC------
T ss_pred HH------HHHHHHcCCCEEEECccCCCCCC----ccchHHHHHHHHHHHHHHh-CCCeEEEEeeeeeccCccc------
Confidence 76 78899999999999999754421 1357999999999999998 8899999999965442210
Q ss_pred CCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceec-CccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHH
Q psy17679 203 PVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWID-NVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMI 281 (303)
Q Consensus 203 ~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~ 281 (303)
.+. +...|..+|...|.+++... ...++++||++. +... +.....+..... .++++++|+|++++
T Consensus 121 -~~~-~~~~y~~~K~~~e~~~~~~~-i~~~~lrp~~~~~~~~~----------~~~~~~~~~~~~-~~~i~~~Dva~~~~ 186 (206)
T 1hdo_A 121 -VPP-RLQAVTDDHIRMHKVLRESG-LKYVAVMPPHIGDQPLT----------GAYTVTLDGRGP-SRVISKHDLGHFML 186 (206)
T ss_dssp -SCG-GGHHHHHHHHHHHHHHHHTC-SEEEEECCSEEECCCCC----------SCCEEESSSCSS-CSEEEHHHHHHHHH
T ss_pred -ccc-cchhHHHHHHHHHHHHHhCC-CCEEEEeCCcccCCCCC----------cceEecccCCCC-CCccCHHHHHHHHH
Confidence 011 56678888999999886532 122799998762 2110 111011111111 58999999999999
Q ss_pred HHHhhcccCCcc
Q psy17679 282 SIAWSIGESGKV 293 (303)
Q Consensus 282 ~~~~~~~~~~~~ 293 (303)
.++.++...+..
T Consensus 187 ~~~~~~~~~g~~ 198 (206)
T 1hdo_A 187 RCLTTDEYDGHS 198 (206)
T ss_dssp HTTSCSTTTTCE
T ss_pred HHhcCccccccc
Confidence 999876544433
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=7.2e-23 Score=175.80 Aligned_cols=205 Identities=19% Similarity=0.143 Sum_probs=143.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhc--CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRS--CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~--g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+++|+|+||||+|++|+++++.|++. |++ |++++|++. .++.+ ..++.++.+|
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~---V~~~~r~~~------~~~~~----------------~~~~~~~~~D 56 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFV---AKGLVRSAQ------GKEKI----------------GGEADVFIGD 56 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCE---EEEEESCHH------HHHHT----------------TCCTTEEECC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcE---EEEEEcCCC------chhhc----------------CCCeeEEEec
Confidence 45789999999999999999999999 676 999999642 11111 1467799999
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcceecccc----------------ccHHHHHhhhHHHHHHHHHHHHhcCCCceEE
Q psy17679 120 CSLPGLGLSETDRATLVKQVNIVFHGAATVRFD----------------EHIKMAVKINVCGVQAMLQLAREMKDLKAFV 183 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~----------------~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i 183 (303)
++|.+ ++..+++++|+|||+||..... ..+...+++|+.++.++++++.+. +++|||
T Consensus 57 ~~d~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv 129 (253)
T 1xq6_A 57 ITDAD------SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIV 129 (253)
T ss_dssp TTSHH------HHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEE
T ss_pred CCCHH------HHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-CCCEEE
Confidence 99876 7889999999999999975321 111245789999999999999988 889999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhh--HHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhcc
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYEN--LIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHL 261 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~--~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~ 261 (303)
++||.++.... .|..+|. .|..+|...|.+++.. .-..++++||.+.+..+.. .....+....++
T Consensus 130 ~~SS~~~~~~~---------~~~~~~~~~~y~~sK~~~e~~~~~~-~i~~~~vrpg~v~~~~~~~---~~~~~~~~~~~~ 196 (253)
T 1xq6_A 130 VVGSMGGTNPD---------HPLNKLGNGNILVWKRKAEQYLADS-GTPYTIIRAGGLLDKEGGV---RELLVGKDDELL 196 (253)
T ss_dssp EEEETTTTCTT---------CGGGGGGGCCHHHHHHHHHHHHHTS-SSCEEEEEECEEECSCSSS---SCEEEESTTGGG
T ss_pred EEcCccCCCCC---------CccccccchhHHHHHHHHHHHHHhC-CCceEEEecceeecCCcch---hhhhccCCcCCc
Confidence 99999764221 2333443 3777888899988752 1122899998764433211 001111111222
Q ss_pred CCCCccccceehhHHHHHHHHHHhhcccCCcch
Q psy17679 262 INLNTVTDMVPVDLVVNSMISIAWSIGESGKVE 294 (303)
Q Consensus 262 ~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~~ 294 (303)
+ ....+++++|+|++++.++.++...+..+
T Consensus 197 ~---~~~~~~~~~Dva~~~~~~~~~~~~~g~~~ 226 (253)
T 1xq6_A 197 Q---TDTKTVPRADVAEVCIQALLFEEAKNKAF 226 (253)
T ss_dssp G---SSCCEEEHHHHHHHHHHHTTCGGGTTEEE
T ss_pred C---CCCcEEcHHHHHHHHHHHHcCccccCCEE
Confidence 2 13569999999999999998765444333
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=5.8e-23 Score=172.46 Aligned_cols=193 Identities=12% Similarity=0.108 Sum_probs=139.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|+|+||||+|++|+++++.|++.|+ +..|++++|++... ..++.++.+|+.+
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~-~~~V~~~~r~~~~~-------------------------~~~~~~~~~D~~~ 57 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPT-LAKVIAPARKALAE-------------------------HPRLDNPVGPLAE 57 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTT-CCEEECCBSSCCCC-------------------------CTTEECCBSCHHH
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCC-CCeEEEEeCCCccc-------------------------CCCceEEeccccC
Confidence 357999999999999999999999987 11399999986531 1578888999887
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEF 201 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~ 201 (303)
.+ ++.+++ +|+|||+|+.... ..++...+++|+.++.++++++.+. +++|||++||..+...
T Consensus 58 ~~------~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~-------- 120 (215)
T 2a35_A 58 LL------PQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAK-------- 120 (215)
T ss_dssp HG------GGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT--------
T ss_pred HH------HHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCcccCCC--------
Confidence 65 445555 9999999997543 3456788899999999999999998 8899999999966431
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHH
Q psy17679 202 YPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMI 281 (303)
Q Consensus 202 ~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~ 281 (303)
+ ...|..+|...|.+++...-...++++||.+.+......+...+. +.... .+ +..++++|++|+|++++
T Consensus 121 ---~---~~~y~~sK~~~e~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~-~~~~~-~~--~~~~~~i~~~Dva~~~~ 190 (215)
T 2a35_A 121 ---S---SIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILA-APIAR-IL--PGKYHGIEACDLARALW 190 (215)
T ss_dssp ---C---SSHHHHHHHHHHHHHTTSCCSEEEEEECCSEESTTSCEEGGGGTT-CCCC-------CHHHHHHHHHHHHHHH
T ss_pred ---C---ccHHHHHHHHHHHHHHHcCCCeEEEEeCceeeCCCCcchHHHHHH-Hhhhh-cc--CCCcCcEeHHHHHHHHH
Confidence 2 235777888899998875322147899986543322111111111 11111 11 23678999999999999
Q ss_pred HHHhhcc
Q psy17679 282 SIAWSIG 288 (303)
Q Consensus 282 ~~~~~~~ 288 (303)
.++.++.
T Consensus 191 ~~~~~~~ 197 (215)
T 2a35_A 191 RLALEEG 197 (215)
T ss_dssp HHHTCCC
T ss_pred HHHhcCC
Confidence 9998764
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-21 Score=171.12 Aligned_cols=193 Identities=14% Similarity=0.091 Sum_probs=135.3
Q ss_pred cEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
|+||||||||++|+++++.|++. |++ |++++|+++..... ...+++++.+|++|+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~---V~~~~R~~~~~~~~---------------------~~~~v~~~~~D~~d~ 56 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDH---FHIGVRNVEKVPDD---------------------WRGKVSVRQLDYFNQ 56 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTT---EEEEESSGGGSCGG---------------------GBTTBEEEECCTTCH
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCc---EEEEECCHHHHHHh---------------------hhCCCEEEEcCCCCH
Confidence 57999999999999999999987 888 99999986532210 125899999999987
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCCCC
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYP 203 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~~ 203 (303)
+ .+..+++++|+|||+|+..... ..|+.++.++++++++. +++||||+||......
T Consensus 57 ~------~l~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~~-gv~~iv~~Ss~~~~~~---------- 112 (289)
T 3e48_A 57 E------SMVEAFKGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQS-GVAHIIFIGYYADQHN---------- 112 (289)
T ss_dssp H------HHHHHTTTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHHT-TCCEEEEEEESCCSTT----------
T ss_pred H------HHHHHHhCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHHc-CCCEEEEEcccCCCCC----------
Confidence 6 7999999999999999975322 23788899999999998 8999999999642111
Q ss_pred CCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHH
Q psy17679 204 VPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISI 283 (303)
Q Consensus 204 ~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~ 283 (303)
.|.. ...+ ....|..+....-. .+++|||++.+.+. .++........ ..++.++..++|++++|+|++++.+
T Consensus 113 ~~~~-~~~~---~~~~e~~~~~~g~~-~~ilrp~~~~~~~~--~~~~~~~~~~~-~~~~~g~~~~~~i~~~Dva~~~~~~ 184 (289)
T 3e48_A 113 NPFH-MSPY---FGYASRLLSTSGID-YTYVRMAMYMDPLK--PYLPELMNMHK-LIYPAGDGRINYITRNDIARGVIAI 184 (289)
T ss_dssp CCST-THHH---HHHHHHHHHHHCCE-EEEEEECEESTTHH--HHHHHHHHHTE-ECCCCTTCEEEEECHHHHHHHHHHH
T ss_pred CCCc-cchh---HHHHHHHHHHcCCC-EEEEeccccccccH--HHHHHHHHCCC-EecCCCCceeeeEEHHHHHHHHHHH
Confidence 1111 1111 11234444432211 27999987644321 22333333222 3355678889999999999999999
Q ss_pred HhhcccCCcc
Q psy17679 284 AWSIGESGKV 293 (303)
Q Consensus 284 ~~~~~~~~~~ 293 (303)
+.++...+..
T Consensus 185 l~~~~~~g~~ 194 (289)
T 3e48_A 185 IKNPDTWGKR 194 (289)
T ss_dssp HHCGGGTTCE
T ss_pred HcCCCcCCce
Confidence 9987654433
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.1e-21 Score=166.95 Aligned_cols=191 Identities=16% Similarity=0.160 Sum_probs=141.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|+||||+||||++++++|++ |++ |++++|++... .+ +.+|++|.+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~---V~~~~r~~~~~--------------------------~~---~~~Dl~~~~ 47 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHE---VIKVYNSSEIQ--------------------------GG---YKLDLTDFP 47 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSC---EEEEESSSCCT--------------------------TC---EECCTTSHH
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCe---EEEecCCCcCC--------------------------CC---ceeccCCHH
Confidence 4799999999999999999995 777 99999975310 12 789999866
Q ss_pred CCCCHHHHHHHhcc--ccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC-CCccc
Q psy17679 125 LGLSETDRATLVKQ--VNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP-RERID 198 (303)
Q Consensus 125 ~~~~~~~~~~~~~~--~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~-~~~~~ 198 (303)
++..++++ +|+|||+||.... ..++...+++|+.++.++++++.+. +. ||||+||.++... ..+++
T Consensus 48 ------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~SS~~~~~~~~~~~~ 119 (273)
T 2ggs_A 48 ------RLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHISTDYVFDGEKGNYK 119 (273)
T ss_dssp ------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEEEGGGSCSSSCSBC
T ss_pred ------HHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEecceeEcCCCCCcC
Confidence 67788875 9999999997653 2456788999999999999999987 55 9999999966532 23566
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHH----HHHHhhhhhhccCCCCccccceehh
Q psy17679 199 EEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGML----VGIATGVLHTHLINLNTVTDMVPVD 274 (303)
Q Consensus 199 E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~i~v~ 274 (303)
|+....| ...|..+|...|.+++. ...+++||+.+ ||+..+. .....+....+++ + .++++|++
T Consensus 120 e~~~~~~---~~~Y~~sK~~~e~~~~~---~~~~~iR~~~v---~G~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~ 187 (273)
T 2ggs_A 120 EEDIPNP---INYYGLSKLLGETFALQ---DDSLIIRTSGI---FRNKGFPIYVYKTLKEGKTVFAFK--G-YYSPISAR 187 (273)
T ss_dssp TTSCCCC---SSHHHHHHHHHHHHHCC---TTCEEEEECCC---BSSSSHHHHHHHHHHTTCCEEEES--C-EECCCBHH
T ss_pred CCCCCCC---CCHHHHHHHHHHHHHhC---CCeEEEecccc---ccccHHHHHHHHHHHcCCCEEeec--C-CCCceEHH
Confidence 7654444 44677788889999887 22378888644 4433222 2223343333333 2 78999999
Q ss_pred HHHHHHHHHHhhcc
Q psy17679 275 LVVNSMISIAWSIG 288 (303)
Q Consensus 275 D~a~ai~~~~~~~~ 288 (303)
|+|++++.++.++.
T Consensus 188 dva~~i~~~~~~~~ 201 (273)
T 2ggs_A 188 KLASAILELLELRK 201 (273)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCc
Confidence 99999999998763
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.87 E-value=7.7e-22 Score=179.40 Aligned_cols=177 Identities=19% Similarity=0.130 Sum_probs=135.0
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCC-CccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCP-HLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~-~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
|+|||||||||+|++|+++|++.|+ + |++++|+ .|.
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~---v~~~d~~----------------------------------------~d~ 37 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHH---IFEVHRQ----------------------------------------TKE 37 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCE---EEECCTT----------------------------------------CCH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCE---EEEECCC----------------------------------------CCH
Confidence 6899999999999999999999987 5 6666552 222
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCc-eEEEEeCCcccCCCCccccCCC
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLK-AFVHVSTAFTHCPRERIDEEFY 202 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~-r~i~iSS~~~~~~~~~~~E~~~ 202 (303)
+++..+++++|+|||+|+..... ++...+++|+.++.++++++++. +++ ||||+||.++..
T Consensus 38 ------~~l~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~~---------- 99 (369)
T 3st7_A 38 ------EELESALLKADFIVHLAGVNRPE-HDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQATQ---------- 99 (369)
T ss_dssp ------HHHHHHHHHCSEEEECCCSBCTT-CSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGGS----------
T ss_pred ------HHHHHHhccCCEEEECCcCCCCC-CHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhcC----------
Confidence 26788888999999999976543 44567788999999999999998 666 999999997653
Q ss_pred CCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccCh-------HHHHHHHHhhhhhhccCCCCcccccee
Q psy17679 203 PVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGP-------IGMLVGIATGVLHTHLINLNTVTDMVP 272 (303)
Q Consensus 203 ~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~ 272 (303)
...|..+|..+|++++.+....+ +++||+.+.+.... ..++..+..+....+ ++++..++|+|
T Consensus 100 ------~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~ 172 (369)
T 3st7_A 100 ------DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNY 172 (369)
T ss_dssp ------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEE
T ss_pred ------CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEE
Confidence 34577788899999988655433 78888765443221 123334444544333 46788899999
Q ss_pred hhHHHHHHHHHHhhccc
Q psy17679 273 VDLVVNSMISIAWSIGE 289 (303)
Q Consensus 273 v~D~a~ai~~~~~~~~~ 289 (303)
++|+|++++.++.++..
T Consensus 173 v~Dva~~~~~~l~~~~~ 189 (369)
T 3st7_A 173 VDDIVAEIKRAIEGTPT 189 (369)
T ss_dssp HHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHhCCcc
Confidence 99999999999998765
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-21 Score=173.39 Aligned_cols=204 Identities=14% Similarity=0.102 Sum_probs=141.1
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCccc--HHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKD--IQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~--~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+|+|+||||||++|+++++.|++.|++ |++++|+++... ..+.++.+. ..+++++.+|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~~~~~---------------~~~~~~~~~D~~ 65 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHP---TYVLFRPEVVSNIDKVQMLLYFK---------------QLGAKLIEASLD 65 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC---EEEECCSCCSSCHHHHHHHHHHH---------------TTTCEEECCCSS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCc---EEEEECCCcccchhHHHHHHHHH---------------hCCeEEEeCCCC
Confidence 578999999999999999999999987 999999865321 111121111 157889999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCC-CceEEEEeCCcccCCCCccccC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKD-LKAFVHVSTAFTHCPRERIDEE 200 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~-~~r~i~iSS~~~~~~~~~~~E~ 200 (303)
|++ ++..+++++|+|||+++..... .|+.++.+++++|++. + ++|||+ |.|+......
T Consensus 66 d~~------~l~~~~~~~d~vi~~a~~~~~~--------~~~~~~~~l~~aa~~~-g~v~~~v~--S~~g~~~~~~---- 124 (313)
T 1qyd_A 66 DHQ------RLVDALKQVDVVISALAGGVLS--------HHILEQLKLVEAIKEA-GNIKRFLP--SEFGMDPDIM---- 124 (313)
T ss_dssp CHH------HHHHHHTTCSEEEECCCCSSSS--------TTTTTHHHHHHHHHHS-CCCSEEEC--SCCSSCTTSC----
T ss_pred CHH------HHHHHHhCCCEEEECCccccch--------hhHHHHHHHHHHHHhc-CCCceEEe--cCCcCCcccc----
Confidence 876 7889999999999999975332 2677789999999998 6 999985 4554322111
Q ss_pred CCCCCCCh-hhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHH----HHhhhhhhccCCCCccccceehhH
Q psy17679 201 FYPVPLKY-ENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVG----IATGVLHTHLINLNTVTDMVPVDL 275 (303)
Q Consensus 201 ~~~~~~~~-~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~i~v~D 275 (303)
..+..+ ...| .+|..+|++++...-. .++++||++.+.+.+. +... ...+....+++.++..++|++++|
T Consensus 125 --~~~~~p~~~~y-~sK~~~e~~~~~~g~~-~~ilrp~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~D 199 (313)
T 1qyd_A 125 --EHALQPGSITF-IDKRKVRRAIEAASIP-YTYVSSNMFAGYFAGS-LAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDD 199 (313)
T ss_dssp --CCCCSSTTHHH-HHHHHHHHHHHHTTCC-BCEEECCEEHHHHTTT-SSCTTCCSSCCSSEECCBTTSCSEEEEECHHH
T ss_pred --ccCCCCCcchH-HHHHHHHHHHHhcCCC-eEEEEeceeccccccc-cccccccccCCCCeEEEeCCCCceEEEEEHHH
Confidence 112122 3456 7888899998764322 2788998764322111 0000 011222245667788899999999
Q ss_pred HHHHHHHHHhhcccCC
Q psy17679 276 VVNSMISIAWSIGESG 291 (303)
Q Consensus 276 ~a~ai~~~~~~~~~~~ 291 (303)
+|++++.++.++...+
T Consensus 200 va~~~~~~l~~~~~~~ 215 (313)
T 1qyd_A 200 VGTYTIKSIDDPQTLN 215 (313)
T ss_dssp HHHHHHHHTTCGGGSS
T ss_pred HHHHHHHHHhCcccCC
Confidence 9999999998775433
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.4e-21 Score=169.61 Aligned_cols=188 Identities=13% Similarity=0.127 Sum_probs=133.0
Q ss_pred EEEEeCCcchhHHHHHHHHHhc--CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRS--CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~--g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+|||||||+|+++++.|++. |++ |++++|++....... . .++.++.+|++|.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~~~~~------~---------------~~~~~~~~D~~d~ 56 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQ---IVAIVRNPAKAQALA------A---------------QGITVRQADYGDE 56 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGG---EEEEESCTTTCHHHH------H---------------TTCEEEECCTTCH
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCce---EEEEEcChHhhhhhh------c---------------CCCeEEEcCCCCH
Confidence 4899999999999999999998 887 999999865332110 0 4788999999987
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCCCC
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYP 203 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~~ 203 (303)
+ ++..+++++|+|||+|+... ..|+.++.++++++.+. +++||||+||.++..
T Consensus 57 ~------~~~~~~~~~d~vi~~a~~~~---------~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~----------- 109 (286)
T 2zcu_A 57 A------ALTSALQGVEKLLLISSSEV---------GQRAPQHRNVINAAKAA-GVKFIAYTSLLHADT----------- 109 (286)
T ss_dssp H------HHHHHTTTCSEEEECC-----------------CHHHHHHHHHHHH-TCCEEEEEEETTTTT-----------
T ss_pred H------HHHHHHhCCCEEEEeCCCCc---------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCC-----------
Confidence 6 78899999999999999521 24788999999999998 899999999986541
Q ss_pred CCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHH
Q psy17679 204 VPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISI 283 (303)
Q Consensus 204 ~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~ 283 (303)
.| ..|..+|..+|.+++...- ..++++||++.+.. ...+.....+... .++.++..++|+|++|+|++++.+
T Consensus 110 ~~----~~y~~sK~~~e~~~~~~~~-~~~ilrp~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~~~~~~ 181 (286)
T 2zcu_A 110 SP----LGLADEHIETEKMLADSGI-VYTLLRNGWYSENY--LASAPAALEHGVF-IGAAGDGKIASATRADYAAAAARV 181 (286)
T ss_dssp CC----STTHHHHHHHHHHHHHHCS-EEEEEEECCBHHHH--HTTHHHHHHHTEE-EESCTTCCBCCBCHHHHHHHHHHH
T ss_pred Cc----chhHHHHHHHHHHHHHcCC-CeEEEeChHHhhhh--HHHhHHhhcCCce-eccCCCCccccccHHHHHHHHHHH
Confidence 11 1356778889998876321 12789987542211 1122233332222 245567889999999999999999
Q ss_pred HhhcccCCc
Q psy17679 284 AWSIGESGK 292 (303)
Q Consensus 284 ~~~~~~~~~ 292 (303)
+.++...+.
T Consensus 182 ~~~~~~~g~ 190 (286)
T 2zcu_A 182 ISEAGHEGK 190 (286)
T ss_dssp HHSSSCTTC
T ss_pred hcCCCCCCc
Confidence 987644333
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-21 Score=169.36 Aligned_cols=206 Identities=10% Similarity=0.091 Sum_probs=138.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+||||||+|+||++++++|++.|+. |++++|+..... ++.. ....++.++.+|++
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~~~~~------~~~~------------~~~~~~~~~~~Dv~ 61 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGDT---VIGTARRTEALD------DLVA------------AYPDRAEAISLDVT 61 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSGGGGH------HHHH------------HCTTTEEEEECCTT
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHHHH------HHHH------------hccCCceEEEeeCC
Confidence 35689999999999999999999999987 889999754321 1111 01257899999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHH----HHHHhcCCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAML----QLAREMKDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll----~~a~~~~~~~r~i 183 (303)
|.+ ++..+++ ++|+||||||.... ...+...+++|+.++..+. ..+++. +..+||
T Consensus 62 ~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv 134 (281)
T 3m1a_A 62 DGE------RIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-GSGSVV 134 (281)
T ss_dssp CHH------HHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred CHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEE
Confidence 976 5665554 78999999997532 2345678899999955554 444555 678999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecC-ccChH---------H
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDN-VYGPI---------G 247 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~-~~g~~---------~ 247 (303)
++||..+.. +..+...|..+|...+.+.+.+... .. ++++||++.+ .+++. .
T Consensus 135 ~~sS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 202 (281)
T 3m1a_A 135 NISSFGGQL------------SFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPA 202 (281)
T ss_dssp EECCGGGTC------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTT
T ss_pred EEcCccccC------------CCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchh
Confidence 999996653 2335567888888888888776544 22 7888997743 33321 1
Q ss_pred HHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcccC
Q psy17679 248 MLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
............ .......+++++|+|++++.++.++...
T Consensus 203 ~~~~~~~~~~~~---~~~~~~~~~~~~dva~a~~~~~~~~~~~ 242 (281)
T 3m1a_A 203 YAEKVGPTRQLV---QGSDGSQPGDPAKAAAAIRLALDTEKTP 242 (281)
T ss_dssp THHHHHHHHHHH---HC-----CBCHHHHHHHHHHHHHSSSCC
T ss_pred hHHHhHHHHHHH---hhccCCCCCCHHHHHHHHHHHHhCCCCC
Confidence 111111111111 1223345788999999999999877544
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.8e-20 Score=159.33 Aligned_cols=199 Identities=15% Similarity=0.137 Sum_probs=139.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+|+||||+|+||++++++|+++|++ |++++|++. .++++... ..+++++.+|+
T Consensus 4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~~-------------~~~~~~~~~D~ 61 (244)
T 1cyd_A 4 NFSGLRALVTGAGKGIGRDTVKALHASGAK---VVAVTRTNS------DLVSLAKE-------------CPGIEPVCVDL 61 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-------------STTCEEEECCT
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHh-------------ccCCCcEEecC
Confidence 367799999999999999999999999987 889999642 22222111 13567889999
Q ss_pred CCCCCCCCHHHHHHHhc---cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC-CceEEEEe
Q psy17679 121 SLPGLGLSETDRATLVK---QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD-LKAFVHVS 186 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~---~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~-~~r~i~iS 186 (303)
++.+ ++..+++ ++|+|||+||.... ...+...+++|+.++.++++++.+. ++ ..+||++|
T Consensus 62 ~~~~------~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~s 135 (244)
T 1cyd_A 62 GDWD------ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVS 135 (244)
T ss_dssp TCHH------HHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred CCHH------HHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEc
Confidence 9876 6777765 58999999996532 2345678899999999998887653 13 57999999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH-----HHHHHHHhh
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI-----GMLVGIATG 255 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~-----~~~~~~~~~ 255 (303)
|..+... ......|..+|...+.+.+.+...+ . ++++||++.+..... .+...+..+
T Consensus 136 S~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~ 203 (244)
T 1cyd_A 136 SMVAHVT------------FPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKER 203 (244)
T ss_dssp CGGGTSC------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHH
T ss_pred chhhcCC------------CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhc
Confidence 9965432 2234568888888888888765442 2 688898654332111 011111111
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....++++++|+|++++.++.++.
T Consensus 204 ---------~~~~~~~~~~dva~~~~~l~~~~~ 227 (244)
T 1cyd_A 204 ---------HPLRKFAEVEDVVNSILFLLSDRS 227 (244)
T ss_dssp ---------STTSSCBCHHHHHHHHHHHHSGGG
T ss_pred ---------CCccCCCCHHHHHHHHHHHhCchh
Confidence 123578999999999999997654
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.6e-20 Score=160.30 Aligned_cols=227 Identities=12% Similarity=0.032 Sum_probs=147.6
Q ss_pred CCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc------cHHHHHHHHHHhHHHhhhhccCcC
Q psy17679 35 GTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK------DIQERLDAIFEDRLFWRLRAEVPD 108 (303)
Q Consensus 35 ~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~------~~~~~l~~l~~~~~~~~~~~~~~~ 108 (303)
.......+++|++|||||+|+||+++++.|+++|+. |++++|+.... ...+.+++.... +. .
T Consensus 4 ~~~~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~----~ 71 (278)
T 3sx2_A 4 PRSSEGPLTGKVAFITGAARGQGRAHAVRLAADGAD---IIAVDLCDQIASVPYPLATPEELAATVKL-----VE----D 71 (278)
T ss_dssp -----CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCCTTCSSCCCCHHHHHHHHHH-----HH----H
T ss_pred CCCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEecccccccccccccchHHHHHHHHH-----HH----h
Confidence 333344578899999999999999999999999997 88888873210 001222221110 00 0
Q ss_pred cCCceEEEEecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhc--
Q psy17679 109 FRSKVSAVAGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREM-- 176 (303)
Q Consensus 109 ~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~-- 176 (303)
...++.++.+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+.
T Consensus 72 ~~~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 145 (278)
T 3sx2_A 72 IGSRIVARQADVRDRE------SLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLV 145 (278)
T ss_dssp HTCCEEEEECCTTCHH------HHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 1258899999999976 5665554 79999999998643 3456788999999999999887553
Q ss_pred --CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHH
Q psy17679 177 --KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGM 248 (303)
Q Consensus 177 --~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~ 248 (303)
+...+||++||..+..... .+......|..+|...+.+.+.+...+ . +.+.||++.+.......
T Consensus 146 ~~~~~g~iv~isS~~~~~~~~--------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~ 217 (278)
T 3sx2_A 146 KQGTGGSIVLISSSAGLAGVG--------SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEF 217 (278)
T ss_dssp HHCSCEEEEEECCGGGTSCCC--------CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHH
T ss_pred hCCCCcEEEEEccHHhcCCCc--------cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhh
Confidence 1256899999996653211 122456678888988888887665443 2 78889987654432211
Q ss_pred HHHHHhh-----hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 249 LVGIATG-----VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 249 ~~~~~~~-----~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....... .....++.... ..+++++|+|+++++++....
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~ 261 (278)
T 3sx2_A 218 TREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQA 261 (278)
T ss_dssp HHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGG
T ss_pred HHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCccc
Confidence 1111111 11111222222 578899999999999987654
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.85 E-value=4e-21 Score=165.32 Aligned_cols=202 Identities=13% Similarity=0.032 Sum_probs=138.2
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
||+||||||+||||+++++.|++.|++ |++++|++.... . .+.+|+++.
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~---V~~~~r~~~~~~-------------------------~---~~~~D~~~~ 49 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHT---VIGIDRGQADIE-------------------------A---DLSTPGGRE 49 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSSSSEE-------------------------C---CTTSHHHHH
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCE---EEEEeCChhHcc-------------------------c---cccCCcccH
Confidence 368999999999999999999999987 999999764211 1 156787775
Q ss_pred CCCCCHHHHHHHhc----cccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCCcccCCCC-
Q psy17679 124 GLGLSETDRATLVK----QVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTAFTHCPRE- 195 (303)
Q Consensus 124 ~~~~~~~~~~~~~~----~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~~~~~~~~- 195 (303)
+ ++..+++ ++|+|||+||......++...+++|+.++.++++++.+. .+.+|||++||..+.....
T Consensus 50 ~------~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~ 123 (255)
T 2dkn_A 50 T------AVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAA 123 (255)
T ss_dssp H------HHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGG
T ss_pred H------HHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccccc
Confidence 5 5666665 899999999986645667889999999999999987654 2568999999996654321
Q ss_pred --ccccC-------CCC----CCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHH--HHHHHh
Q psy17679 196 --RIDEE-------FYP----VPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGM--LVGIAT 254 (303)
Q Consensus 196 --~~~E~-------~~~----~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~--~~~~~~ 254 (303)
+..|. ... .+..+...|..+|...|.+.+.+... .. ++++||++ +++... ......
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v---~~~~~~~~~~~~~~ 200 (255)
T 2dkn_A 124 ELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAV---ETPLLQASKADPRY 200 (255)
T ss_dssp GCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCB---CSHHHHHHHHCTTT
T ss_pred ccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcc---cchhhhhcccchhh
Confidence 01000 000 00135677889999999988877543 22 78899865 444221 111011
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+.....+. + ....+++++|+|++++.++.++
T Consensus 201 ~~~~~~~~-~-~~~~~~~~~dva~~~~~l~~~~ 231 (255)
T 2dkn_A 201 GESTRRFV-A-PLGRGSEPREVAEAIAFLLGPQ 231 (255)
T ss_dssp HHHHHSCC-C-TTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHH-H-HhcCCCCHHHHHHHHHHHhCCC
Confidence 11111111 2 3457899999999999999866
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-20 Score=161.50 Aligned_cols=203 Identities=11% Similarity=0.053 Sum_probs=139.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+|+||||+|+||+++++.|++.|++ |++++|+.... .+..+++.. ...++.++.+|+
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~-------------~~~~~~~~~~D~ 69 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGAS---VVVSDINADAA--NHVVDEIQQ-------------LGGQAFACRCDI 69 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCE---EEEEESCHHHH--HHHHHHHHH-------------TTCCEEEEECCT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCE---EEEEcCCHHHH--HHHHHHHHH-------------hCCceEEEEcCC
Confidence 367799999999999999999999999987 88999974311 111111111 125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+|.+ ++..+++ ++|+|||+||.... ...+...+++|+.++.++++++.+. .+..+||+
T Consensus 70 ~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~ 143 (255)
T 1fmc_A 70 TSEQ------ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILT 143 (255)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9876 5666654 89999999997542 2345678899999999998887531 25689999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccCh----HHHHHHHHh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGP----IGMLVGIAT 254 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~----~~~~~~~~~ 254 (303)
+||..+.. +..+...|..+|...+.+.+.+...+ . ++++||++.+.... .........
T Consensus 144 ~sS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 211 (255)
T 1fmc_A 144 ITSMAAEN------------KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQ 211 (255)
T ss_dssp ECCGGGTC------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHH
T ss_pred EcchhhcC------------CCCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHh
Confidence 99996543 22345668888888888887765432 2 78889866433211 111111111
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+ .....+++++|+|++++.++..+.
T Consensus 212 ~---------~~~~~~~~~~dva~~~~~l~~~~~ 236 (255)
T 1fmc_A 212 H---------TPIRRLGQPQDIANAALFLCSPAA 236 (255)
T ss_dssp T---------CSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred c---------CCcccCCCHHHHHHHHHHHhCCcc
Confidence 1 112347899999999999987653
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-20 Score=166.30 Aligned_cols=199 Identities=16% Similarity=0.095 Sum_probs=137.7
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC-CcccH---HHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK-KGKDI---QERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~-~~~~~---~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+|+|+||||||++|+++++.|++.|++ |++++|++ +.... .+.++.+.. .+++++.+|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~~~~~l~~---------------~~v~~v~~D 63 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNP---TYALVRKTITAANPETKEELIDNYQS---------------LGVILLEGD 63 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCC---EEEEECCSCCSSCHHHHHHHHHHHHH---------------TTCEEEECC
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCc---EEEEECCCcccCChHHHHHHHHHHHh---------------CCCEEEEeC
Confidence 578999999999999999999999987 89999986 22111 111211111 578899999
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCC-CceEEEEeCCcccCCCCccc
Q psy17679 120 CSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKD-LKAFVHVSTAFTHCPRERID 198 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~-~~r~i~iSS~~~~~~~~~~~ 198 (303)
++|.+ .+..+++++|+|||+++... +.++.++++++.+. + ++|||+ |.|+... +
T Consensus 64 ~~d~~------~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v~--S~~g~~~----~ 118 (307)
T 2gas_A 64 INDHE------TLVKAIKQVDIVICAAGRLL------------IEDQVKIIKAIKEA-GNVKKFFP--SEFGLDV----D 118 (307)
T ss_dssp TTCHH------HHHHHHTTCSEEEECSSSSC------------GGGHHHHHHHHHHH-CCCSEEEC--SCCSSCT----T
T ss_pred CCCHH------HHHHHHhCCCEEEECCcccc------------cccHHHHHHHHHhc-CCceEEee--cccccCc----c
Confidence 99876 78999999999999999643 34567899999988 6 899983 5554321 1
Q ss_pred cCCCCCCCCh-hhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHH--HHHhhhhhhccCCCCccccceehhH
Q psy17679 199 EEFYPVPLKY-ENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLV--GIATGVLHTHLINLNTVTDMVPVDL 275 (303)
Q Consensus 199 E~~~~~~~~~-~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~D 275 (303)
+. .+..+ ...| .+|...|.+++...-. .++++||.+.+.+.+..... ....+....+++.++..++|++++|
T Consensus 119 ~~---~~~~p~~~~y-~sK~~~e~~~~~~~i~-~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 193 (307)
T 2gas_A 119 RH---DAVEPVRQVF-EEKASIRRVIEAEGVP-YTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEAD 193 (307)
T ss_dssp SC---CCCTTHHHHH-HHHHHHHHHHHHHTCC-BEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHH
T ss_pred cc---cCCCcchhHH-HHHHHHHHHHHHcCCC-eEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHH
Confidence 11 12222 4567 7898899988764322 27899987765443221000 0001122234666778899999999
Q ss_pred HHHHHHHHHhhcccC
Q psy17679 276 VVNSMISIAWSIGES 290 (303)
Q Consensus 276 ~a~ai~~~~~~~~~~ 290 (303)
+|++++.++.++...
T Consensus 194 va~~~~~~l~~~~~~ 208 (307)
T 2gas_A 194 VGTFTIRAANDPNTL 208 (307)
T ss_dssp HHHHHHHHHTCGGGT
T ss_pred HHHHHHHHHcCcccc
Confidence 999999999876543
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=168.03 Aligned_cols=196 Identities=18% Similarity=0.163 Sum_probs=136.4
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+++|+||||||++|+++++.|++.|++ |++++|+++.. .+.++++.. .+++++.+|++|.
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~--~~~~~~l~~---------------~~v~~v~~Dl~d~ 70 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHP---TYVFTRPNSSK--TTLLDEFQS---------------LGAIIVKGELDEH 70 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCC---EEEEECTTCSC--HHHHHHHHH---------------TTCEEEECCTTCH
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCc---EEEEECCCCch--hhHHHHhhc---------------CCCEEEEecCCCH
Confidence 358999999999999999999999987 99999987522 122222211 5788999999987
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCC-CceEEEEeCCcccCCCCccccCCC
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKD-LKAFVHVSTAFTHCPRERIDEEFY 202 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~-~~r~i~iSS~~~~~~~~~~~E~~~ 202 (303)
+ ++..+++++|+|||+++... +.++.++++++++. + ++|||+ |.|+... ++.
T Consensus 71 ~------~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v~--S~~g~~~----~~~-- 123 (318)
T 2r6j_A 71 E------KLVELMKKVDVVISALAFPQ------------ILDQFKILEAIKVA-GNIKRFLP--SDFGVEE----DRI-- 123 (318)
T ss_dssp H------HHHHHHTTCSEEEECCCGGG------------STTHHHHHHHHHHH-CCCCEEEC--SCCSSCT----TTC--
T ss_pred H------HHHHHHcCCCEEEECCchhh------------hHHHHHHHHHHHhc-CCCCEEEe--eccccCc----ccc--
Confidence 6 78999999999999998632 34567899999998 6 899985 4454321 111
Q ss_pred CCCCCh-hhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHH
Q psy17679 203 PVPLKY-ENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMI 281 (303)
Q Consensus 203 ~~~~~~-~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~ 281 (303)
.+..+ ...| .+|...|.+++...-. .++++||++.+.+.+. +......+....+++.++..++|++++|+|++++
T Consensus 124 -~~~~p~~~~y-~sK~~~e~~~~~~~~~-~~~lr~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 199 (318)
T 2r6j_A 124 -NALPPFEALI-ERKRMIRRAIEEANIP-YTYVSANCFASYFINY-LLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTI 199 (318)
T ss_dssp -CCCHHHHHHH-HHHHHHHHHHHHTTCC-BEEEECCEEHHHHHHH-HHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHH
T ss_pred -cCCCCcchhH-HHHHHHHHHHHhcCCC-eEEEEcceehhhhhhh-hccccCCCCceEEecCCCceeeEeeHHHHHHHHH
Confidence 12223 3567 7898899998764322 2788987653221111 1111112222345667788999999999999999
Q ss_pred HHHhhcccC
Q psy17679 282 SIAWSIGES 290 (303)
Q Consensus 282 ~~~~~~~~~ 290 (303)
.++.++...
T Consensus 200 ~~l~~~~~~ 208 (318)
T 2r6j_A 200 KVATDPRAL 208 (318)
T ss_dssp HHTTCGGGT
T ss_pred HHhcCcccc
Confidence 999876533
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.84 E-value=9.2e-21 Score=164.15 Aligned_cols=209 Identities=13% Similarity=0.068 Sum_probs=143.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|+++|+. |++++|+.. .++++... ...++.++.+|+
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~ 63 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGAT---VAIADIDIE------RARQAAAE------------IGPAAYAVQMDV 63 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH------------HCTTEEEEECCT
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH------------hCCCceEEEeeC
Confidence 467799999999999999999999999987 888898642 22222111 025788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~ 182 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. +...+|
T Consensus 64 ~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~i 137 (259)
T 4e6p_A 64 TRQD------SIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKI 137 (259)
T ss_dssp TCHH------HHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEE
Confidence 9976 5665555 79999999997532 2345778899999999999888654 124699
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH--HHHHHH-
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG--MLVGIA- 253 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~--~~~~~~- 253 (303)
|++||..+.. +......|..+|...+.+.+.+...+ . +.++||++.+...... ......
T Consensus 138 v~isS~~~~~------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~ 205 (259)
T 4e6p_A 138 INMASQAGRR------------GEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYEN 205 (259)
T ss_dssp EEECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHT
T ss_pred EEECChhhcc------------CCCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhcc
Confidence 9999996653 22345678888888888887765443 2 7888987754432111 111111
Q ss_pred --hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 --TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 --~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+.....+........+.+++|+|++++.++....
T Consensus 206 ~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~ 242 (259)
T 4e6p_A 206 RPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAES 242 (259)
T ss_dssp CCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGG
T ss_pred CChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCcc
Confidence 11111112222334568999999999999887554
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-19 Score=157.49 Aligned_cols=223 Identities=13% Similarity=0.041 Sum_probs=144.6
Q ss_pred CccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc-------cHHHHHHHHHHhHHHhhhhccCcC
Q psy17679 36 TPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK-------DIQERLDAIFEDRLFWRLRAEVPD 108 (303)
Q Consensus 36 ~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~-------~~~~~l~~l~~~~~~~~~~~~~~~ 108 (303)
..+...+++|+++||||+|+||+++++.|+++|+. |++++|..... ...+.++++... +. .
T Consensus 7 ~~~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~ 74 (280)
T 3pgx_A 7 AGQAGSLQGRVAFITGAARGQGRSHAVRLAAEGAD---IIACDICAPVSASVTYAPASPEDLDETARL-----VE----D 74 (280)
T ss_dssp ----CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCCCTTCCSCCCCHHHHHHHHHH-----HH----T
T ss_pred hccccccCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeccccccccccccccCHHHHHHHHHH-----HH----h
Confidence 33344578899999999999999999999999997 88888842100 012222222111 00 1
Q ss_pred cCCceEEEEecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH
Q psy17679 109 FRSKVSAVAGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR 174 (303)
Q Consensus 109 ~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~ 174 (303)
...++.++.+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.
T Consensus 75 ~~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~ 148 (280)
T 3pgx_A 75 QGRKALTRVLDVRDDA------ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATV 148 (280)
T ss_dssp TTCCEEEEECCTTCHH------HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred cCCeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 1257889999999976 5555544 78999999998542 23456788999999999988875
Q ss_pred hc----CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccC
Q psy17679 175 EM----KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYG 244 (303)
Q Consensus 175 ~~----~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g 244 (303)
+. +...+||++||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+...
T Consensus 149 ~~~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 216 (280)
T 3pgx_A 149 PAMIEAGNGGSIVVVSSSAGLK------------ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMI 216 (280)
T ss_dssp HHHHHHCSCEEEEEECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTC
T ss_pred HHHHhcCCCCEEEEEcchhhcc------------CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCccc
Confidence 43 1257899999996653 22345678888888888777665442 2 7888998765543
Q ss_pred hHHHHHHHHhhhh---hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 245 PIGMLVGIATGVL---HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 245 ~~~~~~~~~~~~~---~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
............. ............+++++|+|+++++++....
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~ 263 (280)
T 3pgx_A 217 EPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGS 263 (280)
T ss_dssp CHHHHHHHHHHCGGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHSGGG
T ss_pred chhhhhhhhhcCchhhhhhhhcccCCCCCCCHHHHHHHHHHHhCccc
Confidence 3222222211111 0100111122248999999999999987654
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.9e-20 Score=158.81 Aligned_cols=207 Identities=11% Similarity=0.117 Sum_probs=141.4
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|++.|+. |++++|+... .+.+.+.+. ....++.++.+|+
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~Dv 70 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGAS---VVVTDLKSEG---AEAVAAAIR------------QAGGKAIGLECNV 70 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCE---EEEEESSHHH---HHHHHHHHH------------HTTCCEEEEECCT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCcEEEEECCC
Confidence 467899999999999999999999999997 8889986431 111111111 0125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. ++..+||+
T Consensus 71 ~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~ 144 (256)
T 3gaf_A 71 TDEQ------HREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILN 144 (256)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9976 5555554 78999999997542 2345678999999999999887542 25679999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+..... .......
T Consensus 145 isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-----~~~~~~~ 207 (256)
T 3gaf_A 145 ISSMAGEN------------TNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT-----VLTPEIE 207 (256)
T ss_dssp ECCGGGTC------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH-----HCCHHHH
T ss_pred EcCHHHcC------------CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhh-----ccCHHHH
Confidence 99997653 22345678888888888887665443 2 788898765432111 1001000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+........+.+++|+|+++++++....
T Consensus 208 ~~~~~~~p~~r~~~~~dva~~~~~L~s~~~ 237 (256)
T 3gaf_A 208 RAMLKHTPLGRLGEAQDIANAALFLCSPAA 237 (256)
T ss_dssp HHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHhcCCCCCCCCHHHHHHHHHHHcCCcc
Confidence 111111223457899999999999987543
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-19 Score=156.60 Aligned_cols=208 Identities=15% Similarity=0.093 Sum_probs=138.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|+. |++++|+.. .+..+++.. ...++.++.+|++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~~----~~~~~~l~~-------------~~~~~~~~~~D~~ 61 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGAN---IVLNGFGDP----APALAEIAR-------------HGVKAVHHPADLS 61 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEECSSCC----HHHHHHHHT-------------TSCCEEEECCCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCch----HHHHHHHHh-------------cCCceEEEeCCCC
Confidence 46789999999999999999999999987 888999764 111122211 1246888999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i 183 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+.+.+. +. +..+||
T Consensus 62 ~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv 134 (255)
T 2q2v_A 62 DVA------QIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR-NWGRII 134 (255)
T ss_dssp SHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEE
Confidence 876 5666665 79999999997532 23456788999998777766653 44 668999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH--HHH---
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML--VGI--- 252 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~--~~~--- 252 (303)
++||..+... ......|..+|...+.+.+.+...+ . ++++||++.+........ ...
T Consensus 135 ~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 202 (255)
T 2q2v_A 135 NIASVHGLVG------------STGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGD 202 (255)
T ss_dssp EECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCC
T ss_pred EEcCchhccC------------CCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccc
Confidence 9999966532 2234567788888888777664432 2 788898764433211100 000
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.......+.........+++++|+|++++.++..+.
T Consensus 203 ~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~ 238 (255)
T 2q2v_A 203 PLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAG 238 (255)
T ss_dssp HHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGG
T ss_pred hHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCcc
Confidence 000001110222223458999999999999987654
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-19 Score=157.51 Aligned_cols=191 Identities=19% Similarity=0.228 Sum_probs=137.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+||||||+|+||+++++.|++.|+. |++++|+..... ..++.++.+|++
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~~------------------------~~~~~~~~~Dv~ 78 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNYR---VVATSRSIKPSA------------------------DPDIHTVAGDIS 78 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSCCCCS------------------------STTEEEEESCTT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCChhhcc------------------------cCceEEEEccCC
Confidence 56789999999999999999999999997 899999764321 147889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i 183 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++. +. +..+||
T Consensus 79 d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv 151 (260)
T 3un1_A 79 KPE------TADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-GSGHIV 151 (260)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEE
T ss_pred CHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEE
Confidence 976 5665554 79999999997532 23457788999999999998874 33 678999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+... .+..+...|..+|...+.+.+.++..+ . ++++||++.+...+........
T Consensus 152 ~isS~~~~~~----------~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~---- 217 (260)
T 3un1_A 152 SITTSLVDQP----------MVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLA---- 217 (260)
T ss_dssp EECCTTTTSC----------BTTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHH----
T ss_pred EEechhhccC----------CCCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHh----
Confidence 9999855321 122244567778888888777665444 2 7888998765543322111111
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHh
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAW 285 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~ 285 (303)
.......+.+++|+|++++.+..
T Consensus 218 -----~~~p~~r~~~~~dva~av~~L~~ 240 (260)
T 3un1_A 218 -----GLHPVGRMGEIRDVVDAVLYLEH 240 (260)
T ss_dssp -----TTSTTSSCBCHHHHHHHHHHHHH
T ss_pred -----ccCCCCCCcCHHHHHHHHHHhcc
Confidence 11223457889999999999844
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=166.68 Aligned_cols=198 Identities=14% Similarity=0.012 Sum_probs=137.6
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcC-CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSC-PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g-~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
+|+|+||||||++|+++++.|++.| ++ |++++|++..... +.+.. .+++++.+|++|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~---V~~~~R~~~~~~~----~~l~~---------------~~~~~~~~D~~d 62 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFK---VRVVTRNPRKKAA----KELRL---------------QGAEVVQGDQDD 62 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSE---EEEEESCTTSHHH----HHHHH---------------TTCEEEECCTTC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCce---EEEEEcCCCCHHH----HHHHH---------------CCCEEEEecCCC
Confidence 5789999999999999999999998 76 9999998653211 11111 578899999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFY 202 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~ 202 (303)
++ .+..+++++|+|||+++..... ..+.|+.++.++++++.+. +++|||++||...... .+.
T Consensus 63 ~~------~l~~~~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~~~~~~----~~~-- 124 (299)
T 2wm3_A 63 QV------IMELALNGAYATFIVTNYWESC-----SQEQEVKQGKLLADLARRL-GLHYVVYSGLENIKKL----TAG-- 124 (299)
T ss_dssp HH------HHHHHHTTCSEEEECCCHHHHT-----CHHHHHHHHHHHHHHHHHH-TCSEEEECCCCCHHHH----TTT--
T ss_pred HH------HHHHHHhcCCEEEEeCCCCccc-----cchHHHHHHHHHHHHHHHc-CCCEEEEEcCcccccc----CCC--
Confidence 76 7899999999999999853211 1345788899999999998 8999999777633211 111
Q ss_pred CCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHH-HHhhhh-hhccCCCCccccceehhHHHHHH
Q psy17679 203 PVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVG-IATGVL-HTHLINLNTVTDMVPVDLVVNSM 280 (303)
Q Consensus 203 ~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~-~~~~~~-~~~~~~~~~~~~~i~v~D~a~ai 280 (303)
.+ ...|..+|..+|++++...-. .++++||++.+.+... +... ...+.. ...+..++..++|++++|+|+++
T Consensus 125 -~~---~~~y~~sK~~~e~~~~~~gi~-~~ilrp~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~ 198 (299)
T 2wm3_A 125 -RL---AAAHFDGKGEVEEYFRDIGVP-MTSVRLPCYFENLLSH-FLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVV 198 (299)
T ss_dssp -SC---CCHHHHHHHHHHHHHHHHTCC-EEEEECCEEGGGGGTT-TCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHH
T ss_pred -cc---cCchhhHHHHHHHHHHHCCCC-EEEEeecHHhhhchhh-cCCcccCCCCEEEEEecCCCCccceecHHHHHHHH
Confidence 11 234567788899998864221 2899998765432110 0000 011211 11122367788999999999999
Q ss_pred HHHHhhc
Q psy17679 281 ISIAWSI 287 (303)
Q Consensus 281 ~~~~~~~ 287 (303)
+.++.++
T Consensus 199 ~~~l~~~ 205 (299)
T 2wm3_A 199 LSLLKMP 205 (299)
T ss_dssp HHHHHSH
T ss_pred HHHHcCh
Confidence 9999865
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=167.28 Aligned_cols=199 Identities=15% Similarity=0.139 Sum_probs=136.6
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc--c-HHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK--D-IQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~--~-~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+|+|+||||||++|+++++.|++.|++ |++++|+.+.. . ..+.++.+. ..+++++.+|+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~~~~~~~~~~~~l~---------------~~~v~~v~~D~ 65 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHP---TFLLVRESTASSNSEKAQLLESFK---------------ASGANIVHGSI 65 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC---EEEECCCCCTTTTHHHHHHHHHHH---------------TTTCEEECCCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCC---EEEEECCcccccCHHHHHHHHHHH---------------hCCCEEEEecc
Confidence 578999999999999999999999987 99999986532 1 111111111 15789999999
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCC-CceEEEEeCCcccCCCCcccc
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKD-LKAFVHVSTAFTHCPRERIDE 199 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~-~~r~i~iSS~~~~~~~~~~~E 199 (303)
+|.+ .+..+++++|+|||+++... +.++.++++++++. + ++|||+ |.|+... ++
T Consensus 66 ~d~~------~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v~--S~~g~~~----~~ 120 (308)
T 1qyc_A 66 DDHA------SLVEAVKNVDVVISTVGSLQ------------IESQVNIIKAIKEV-GTVKRFFP--SEFGNDV----DN 120 (308)
T ss_dssp TCHH------HHHHHHHTCSEEEECCCGGG------------SGGGHHHHHHHHHH-CCCSEEEC--SCCSSCT----TS
T ss_pred CCHH------HHHHHHcCCCEEEECCcchh------------hhhHHHHHHHHHhc-CCCceEee--cccccCc----cc
Confidence 9876 78899999999999999642 33457899999998 6 999984 4454321 11
Q ss_pred CCCCCCCCh-hhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHH--HHHhhhhhhccCCCCccccceehhHH
Q psy17679 200 EFYPVPLKY-ENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLV--GIATGVLHTHLINLNTVTDMVPVDLV 276 (303)
Q Consensus 200 ~~~~~~~~~-~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~D~ 276 (303)
. .+..+ ...| .+|...|++++...-.+ ++++||++.+.+.+..... ....+....+++.++..++|++++|+
T Consensus 121 ~---~~~~p~~~~y-~sK~~~e~~~~~~~~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 195 (308)
T 1qyc_A 121 V---HAVEPAKSVF-EVKAKVRRAIEAEGIPY-TYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDI 195 (308)
T ss_dssp C---CCCTTHHHHH-HHHHHHHHHHHHHTCCB-EEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHH
T ss_pred c---ccCCcchhHH-HHHHHHHHHHHhcCCCe-EEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHH
Confidence 1 12222 3567 78888999988643222 7889987643222110000 00112222456677889999999999
Q ss_pred HHHHHHHHhhcccC
Q psy17679 277 VNSMISIAWSIGES 290 (303)
Q Consensus 277 a~ai~~~~~~~~~~ 290 (303)
|++++.++.++...
T Consensus 196 a~~~~~~l~~~~~~ 209 (308)
T 1qyc_A 196 GTFTIKAVDDPRTL 209 (308)
T ss_dssp HHHHHTTSSCGGGT
T ss_pred HHHHHHHHhCcccc
Confidence 99999999876543
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=6.1e-20 Score=158.68 Aligned_cols=204 Identities=14% Similarity=0.115 Sum_probs=137.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|+++|++ |++++|+... . +..+++ .+ .++.+|++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~-~--~~~~~~-----------------~~-~~~~~D~~ 59 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGAL---VALCDLRPEG-K--EVAEAI-----------------GG-AFFQVDLE 59 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSTTH-H--HHHHHH-----------------TC-EEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCChhH-H--HHHHHh-----------------hC-CEEEeeCC
Confidence 56789999999999999999999999987 8899998653 1 111111 13 68899999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. .+..+||+
T Consensus 60 ~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~ 133 (256)
T 2d1y_A 60 DER------ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVN 133 (256)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 876 4555443 78999999997532 2245678999999999998887642 25689999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHH-hhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIA-TGVL 257 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~-~~~~ 257 (303)
+||..+... ......|..+|...+.+.+.+...+ . ++++||++.+..... ...... ....
T Consensus 134 isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~ 200 (256)
T 2d1y_A 134 VASVQGLFA------------EQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE-AIALSPDPERT 200 (256)
T ss_dssp ECCGGGTSB------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-HHC--------
T ss_pred EccccccCC------------CCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhh-ccccccCCHHH
Confidence 999965431 2245568888888888877665433 2 788898765432111 000000 1110
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...+........+++++|+|++++.++..+.
T Consensus 201 ~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~ 231 (256)
T 2d1y_A 201 RRDWEDLHALRRLGKPEEVAEAVLFLASEKA 231 (256)
T ss_dssp CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 0111111223458999999999999987653
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-19 Score=159.11 Aligned_cols=219 Identities=12% Similarity=0.085 Sum_probs=144.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc------cHHHHHHHHHHhHHHhhhhccCcCcCCceE
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK------DIQERLDAIFEDRLFWRLRAEVPDFRSKVS 114 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~------~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~ 114 (303)
.+++|++|||||+|+||+++++.|++.|+. |++++|++... ...+.+++.... +. ....++.
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~ 74 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGAD---IAICDRCENSDVVGYPLATADDLAETVAL-----VE----KTGRRCI 74 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSCCTTCSSCCCCHHHHHHHHHH-----HH----HTTCCEE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeCCccccccccccccHHHHHHHHHH-----HH----hcCCeEE
Confidence 367899999999999999999999999987 88999974321 001222221110 00 1125788
Q ss_pred EEEecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---C
Q psy17679 115 AVAGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---K 177 (303)
Q Consensus 115 ~~~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~ 177 (303)
++.+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. +
T Consensus 75 ~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 148 (281)
T 3s55_A 75 SAKVDVKDRA------ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR 148 (281)
T ss_dssp EEECCTTCHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999999976 5555554 79999999997542 2345778999999999999887442 2
Q ss_pred CCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHH
Q psy17679 178 DLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVG 251 (303)
Q Consensus 178 ~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~ 251 (303)
+..+||++||..+... ......|..+|...+.+.+.+...+ . +.++||++.+..........
T Consensus 149 ~~g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~ 216 (281)
T 3s55_A 149 NYGRIVTVSSMLGHSA------------NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFG 216 (281)
T ss_dssp TCEEEEEECCGGGGSC------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHH
T ss_pred CCCEEEEECChhhcCC------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhc
Confidence 5679999999966532 2345668888888888887665543 2 78889977654432111100
Q ss_pred -----HHhh----hhhhccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 252 -----IATG----VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 252 -----~~~~----~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.... ..............+++++|+|+++++++..+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~ 263 (281)
T 3s55_A 217 TMRPDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASS 263 (281)
T ss_dssp C-------CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGT
T ss_pred cccccccccchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCccc
Confidence 0000 0000001122236789999999999999986543
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.7e-20 Score=165.76 Aligned_cols=201 Identities=14% Similarity=0.149 Sum_probs=138.0
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC-Cccc--HHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK-KGKD--IQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~-~~~~--~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
++|+|+||||||++|+++++.|++.|++ |++++|++ +... ..+.++.+.. .+++++.+|
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~l~~~~~---------------~~v~~v~~D 64 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHP---TFIYARPLTPDSTPSSVQLREEFRS---------------MGVTIIEGE 64 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCC---EEEEECCCCTTCCHHHHHHHHHHHH---------------TTCEEEECC
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCc---EEEEECCcccccChHHHHHHHHhhc---------------CCcEEEEec
Confidence 3578999999999999999999999987 99999986 3211 1122222111 578999999
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCC-CceEEEEeCCcccCCCCccc
Q psy17679 120 CSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKD-LKAFVHVSTAFTHCPRERID 198 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~-~~r~i~iSS~~~~~~~~~~~ 198 (303)
++|.+ ++..+++++|+|||+++... +.++.++++++.+. + ++||| +|.|+... +
T Consensus 65 ~~d~~------~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v--~S~~g~~~----~ 119 (321)
T 3c1o_A 65 MEEHE------KMVSVLKQVDIVISALPFPM------------ISSQIHIINAIKAA-GNIKRFL--PSDFGCEE----D 119 (321)
T ss_dssp TTCHH------HHHHHHTTCSEEEECCCGGG------------SGGGHHHHHHHHHH-CCCCEEE--CSCCSSCG----G
T ss_pred CCCHH------HHHHHHcCCCEEEECCCccc------------hhhHHHHHHHHHHh-CCccEEe--ccccccCc----c
Confidence 99876 78999999999999999642 34557899999998 7 89998 35554321 1
Q ss_pred cCCCCCCCCh-hhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHH---HHHhhhhhhccCCCCccccceehh
Q psy17679 199 EEFYPVPLKY-ENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLV---GIATGVLHTHLINLNTVTDMVPVD 274 (303)
Q Consensus 199 E~~~~~~~~~-~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~i~v~ 274 (303)
|. .+..+ ...| .+|...|.+++...-. .++++||++.+.+.+. +.. ....+....+++.++..++|++++
T Consensus 120 ~~---~~~~p~~~~y-~sK~~~e~~~~~~~~~-~~~lrp~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (321)
T 3c1o_A 120 RI---KPLPPFESVL-EKKRIIRRAIEAAALP-YTYVSANCFGAYFVNY-LLHPSPHPNRNDDIVIYGTGETKFVLNYEE 193 (321)
T ss_dssp GC---CCCHHHHHHH-HHHHHHHHHHHHHTCC-BEEEECCEEHHHHHHH-HHCCCSSCCTTSCEEEETTSCCEEEEECHH
T ss_pred cc---ccCCCcchHH-HHHHHHHHHHHHcCCC-eEEEEeceeccccccc-cccccccccccCceEEecCCCcceeEeeHH
Confidence 21 12223 4567 8899999998765322 2788987653322110 100 001122233566778889999999
Q ss_pred HHHHHHHHHHhhcccCCc
Q psy17679 275 LVVNSMISIAWSIGESGK 292 (303)
Q Consensus 275 D~a~ai~~~~~~~~~~~~ 292 (303)
|+|++++.++.++...+.
T Consensus 194 Dva~~~~~~l~~~~~~g~ 211 (321)
T 3c1o_A 194 DIAKYTIKVACDPRCCNR 211 (321)
T ss_dssp HHHHHHHHHHHCGGGTTE
T ss_pred HHHHHHHHHHhCccccCe
Confidence 999999999987754433
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-19 Score=155.82 Aligned_cols=208 Identities=13% Similarity=0.116 Sum_probs=140.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+||||+|+||+++++.|+++|++ |++++|+.... .+..+++.. ...++.++.+|++
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~~---V~~~~r~~~~~--~~~~~~l~~-------------~~~~~~~~~~D~~ 72 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGAR---VIIADLDEAMA--TKAVEDLRM-------------EGHDVSSVVMDVT 72 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHH-------------TTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHh-------------cCCceEEEEecCC
Confidence 56789999999999999999999999987 99999974311 111111111 0257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceecc-c-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVR-F-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~-~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
|.+ ++..+++ ++|+|||+||... . ...+...+++|+.++.++++++.+. .+..+||
T Consensus 73 ~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv 146 (260)
T 3awd_A 73 NTE------SVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIV 146 (260)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEE
Confidence 876 5665554 7899999999754 1 1234678899999999998887652 2568999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHH-HHHHhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGML-VGIATGV 256 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~-~~~~~~~ 256 (303)
++||.++.... +..+...|..+|...+.+.+.+... .. ++++||++.+........ .......
T Consensus 147 ~~sS~~~~~~~----------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~ 216 (260)
T 3awd_A 147 AIGSMSGLIVN----------RPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAW 216 (260)
T ss_dssp EECCGGGTSCC----------SSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHH
T ss_pred EEecchhcccC----------CCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHH
Confidence 99999765321 2223366888888888888776543 22 788898775544321110 0111110
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. ......+++++|+|++++.++..+.
T Consensus 217 ~~-----~~~~~~~~~~~dva~~~~~l~~~~~ 243 (260)
T 3awd_A 217 IA-----GTPMGRVGQPDEVASVVQFLASDAA 243 (260)
T ss_dssp HH-----TCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred Hh-----cCCcCCCCCHHHHHHHHHHHhCchh
Confidence 00 1112347899999999999987643
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-20 Score=155.57 Aligned_cols=186 Identities=10% Similarity=0.047 Sum_probs=134.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+++||||+|+||++++++|+++ +|++++|++. .++++... + .. .++.+|++|.+
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~-----~V~~~~r~~~------~~~~~~~~-----~--------~~-~~~~~D~~~~~ 55 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH-----DLLLSGRRAG------ALAELARE-----V--------GA-RALPADLADEL 55 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS-----EEEEECSCHH------HHHHHHHH-----H--------TC-EECCCCTTSHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC-----CEEEEECCHH------HHHHHHHh-----c--------cC-cEEEeeCCCHH
Confidence 57999999999999999999987 3999999642 22222111 0 12 78899999876
Q ss_pred CCCCHHHHHHHhc---cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCC
Q psy17679 125 LGLSETDRATLVK---QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPR 194 (303)
Q Consensus 125 ~~~~~~~~~~~~~---~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~ 194 (303)
++..+++ ++|+|||+||.... ...+...+++|+.++.++++++... +.++||++||..+..
T Consensus 56 ------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~sS~~~~~-- 126 (207)
T 2yut_A 56 ------EAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFGAYPRYV-- 126 (207)
T ss_dssp ------HHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEECCCHHHH--
T ss_pred ------HHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEcChhhcc--
Confidence 6777777 89999999997532 2346778999999999999999665 678999999996542
Q ss_pred CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhhhhccCCCCccc
Q psy17679 195 ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVT 268 (303)
Q Consensus 195 ~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 268 (303)
+..+...|..+|...+.+.+.+... .. ++++||++.+... . +.+....
T Consensus 127 ----------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~---------~-------~~~~~~~ 180 (207)
T 2yut_A 127 ----------QVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLW---------A-------PLGGPPK 180 (207)
T ss_dssp ----------SSTTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGG---------G-------GGTSCCT
T ss_pred ----------CCCCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCc---------c-------ccCCCCC
Confidence 2234567888888888888776543 22 7888986643320 0 1123346
Q ss_pred cceehhHHHHHHHHHHhhcccC
Q psy17679 269 DMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 269 ~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
.+++++|+|++++.++.++...
T Consensus 181 ~~~~~~dva~~~~~~~~~~~~~ 202 (207)
T 2yut_A 181 GALSPEEAARKVLEGLFREPVP 202 (207)
T ss_dssp TCBCHHHHHHHHHHHHC--CCC
T ss_pred CCCCHHHHHHHHHHHHhCCCCc
Confidence 7999999999999999877543
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-19 Score=156.62 Aligned_cols=210 Identities=18% Similarity=0.185 Sum_probs=139.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|++ |++++|+.... .+..+++... ..++.++.+|++
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~~-------------~~~~~~~~~D~~ 68 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGAS---VYTCSRNQKEL--NDCLTQWRSK-------------GFKVEASVCDLS 68 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHT-------------TCEEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHhc-------------CCcEEEEEcCCC
Confidence 56799999999999999999999999987 88999974211 1111111110 247889999999
Q ss_pred CCCCCCCHHHHHHHh--------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 122 LPGLGLSETDRATLV--------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~--------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
|.+ ++..++ .++|++|||||.... ...+...+++|+.++.++++++.+. .+..+||
T Consensus 69 ~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 142 (260)
T 2ae2_A 69 SRS------ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVV 142 (260)
T ss_dssp CHH------HHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 876 555555 579999999997532 2345678899999999998888532 2568999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+.. +......|..+|...+.+.+.+...+ . ++++||++.+................
T Consensus 143 ~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 210 (260)
T 2ae2_A 143 FISSVSGAL------------AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENL 210 (260)
T ss_dssp EECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHH
T ss_pred EEcchhhcc------------CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHH
Confidence 999996543 22234568888888888888765443 2 78889876543311100000000000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+. .......+++++|+|++++.++..+.
T Consensus 211 ~~~~-~~~~~~~~~~~~dvA~~v~~l~s~~~ 240 (260)
T 2ae2_A 211 NKLI-DRCALRRMGEPKELAAMVAFLCFPAA 240 (260)
T ss_dssp HHHH-HTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHH-hcCCCCCCCCHHHHHHHHHHHcCccc
Confidence 0000 11112357899999999999987543
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.9e-20 Score=158.94 Aligned_cols=204 Identities=10% Similarity=0.047 Sum_probs=139.5
Q ss_pred ccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 39 QEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 39 ~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
...+++|++|||||+|+||+++++.|++.|+. |++++|+.. +++++ ...++.++.+
T Consensus 11 ~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~---------------~~~~~~~~~~ 66 (266)
T 3p19_A 11 GRGSMKKLVVITGASSGIGEAIARRFSEEGHP---LLLLARRVE------RLKAL---------------NLPNTLCAQV 66 (266)
T ss_dssp ----CCCEEEEESTTSHHHHHHHHHHHHTTCC---EEEEESCHH------HHHTT---------------CCTTEEEEEC
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHh---------------hcCCceEEEe
Confidence 33466799999999999999999999999998 889999632 11111 1147889999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCce
Q psy17679 119 DCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKA 181 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r 181 (303)
|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. .+..+
T Consensus 67 Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~ 140 (266)
T 3p19_A 67 DVTDKY------TFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGT 140 (266)
T ss_dssp CTTCHH------HHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred cCCCHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcE
Confidence 999976 5555554 78999999997532 2345678999999999977776532 26689
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH---HHHHHH
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI---GMLVGI 252 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~---~~~~~~ 252 (303)
||++||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+..... ......
T Consensus 141 IV~isS~~~~~------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~ 208 (266)
T 3p19_A 141 IINISSIAGKK------------TFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDG 208 (266)
T ss_dssp EEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHH
T ss_pred EEEEcChhhCC------------CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHH
Confidence 99999997653 22345667788888887777665443 2 788899876543211 111111
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcccCC
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGESG 291 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~ 291 (303)
..... . ....+++++|+|+++++++.++...-
T Consensus 209 ~~~~~-~------~~~r~~~pedvA~av~~l~~~~~~~~ 240 (266)
T 3p19_A 209 YDAWR-V------DMGGVLAADDVARAVLFAYQQPQNVC 240 (266)
T ss_dssp HHHHH-H------HTTCCBCHHHHHHHHHHHHHSCTTEE
T ss_pred HHhhc-c------cccCCCCHHHHHHHHHHHHcCCCCcc
Confidence 11100 0 11237899999999999999876543
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-19 Score=157.48 Aligned_cols=206 Identities=15% Similarity=0.097 Sum_probs=141.9
Q ss_pred cccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEE
Q psy17679 38 MQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVA 117 (303)
Q Consensus 38 ~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~ 117 (303)
|...+++|+++||||+|+||+++++.|++.|+. |++++|+..... +..+++ ..++.++.
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~~--~~~~~~----------------~~~~~~~~ 63 (271)
T 3tzq_B 5 MTAELENKVAIITGACGGIGLETSRVLARAGAR---VVLADLPETDLA--GAAASV----------------GRGAVHHV 63 (271)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECTTSCHH--HHHHHH----------------CTTCEEEE
T ss_pred CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEcCCHHHHH--HHHHHh----------------CCCeEEEE
Confidence 344577899999999999999999999999987 889999865321 111111 25788999
Q ss_pred ecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc---------cccHHHHHhhhHHHHHHHHHHHH----hcC
Q psy17679 118 GDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF---------DEHIKMAVKINVCGVQAMLQLAR----EMK 177 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~---------~~~~~~~~~~N~~~~~~ll~~a~----~~~ 177 (303)
+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++. +.
T Consensus 64 ~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~- 136 (271)
T 3tzq_B 64 VDLTNEV------SVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA- 136 (271)
T ss_dssp CCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred CCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-
Confidence 9999976 5665554 79999999997622 23456789999999999998884 44
Q ss_pred CCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHH
Q psy17679 178 DLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVG 251 (303)
Q Consensus 178 ~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~ 251 (303)
+..+||++||..+.. +......|..+|...+.+.+.++..+ . +.++||++.+..........
T Consensus 137 ~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~ 204 (271)
T 3tzq_B 137 GGGAIVNISSATAHA------------AYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQP 204 (271)
T ss_dssp TCEEEEEECCGGGTS------------BCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHH
T ss_pred CCCEEEEECCHHHcC------------CCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHH
Confidence 668999999996643 22345678888888888887665442 2 78889977554322111111
Q ss_pred HHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 252 IATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...... .......+...+|+|+++++++....
T Consensus 205 ~~~~~~-----~~~~~~r~~~p~dvA~~v~~L~s~~~ 236 (271)
T 3tzq_B 205 IVDIFA-----THHLAGRIGEPHEIAELVCFLASDRA 236 (271)
T ss_dssp HHHHHH-----TTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH-----hcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 111110 11112236789999999999988654
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-19 Score=157.37 Aligned_cols=204 Identities=11% Similarity=0.076 Sum_probs=136.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC-CCCcccHHHHH-HHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR-PKKGKDIQERL-DAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R-~~~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.|++|+++||||+|+||+++++.|++.|+. |++++| +... .+.+ +++... ...++.++.+
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~---~~~~~~~~~~~------------~~~~~~~~~~ 69 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQGFR---VVVHYRHSEGA---AQRLVAELNAA------------RAGSAVLCKG 69 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHHH---HHHHHHHHHHH------------STTCEEEEEC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCChHH---HHHHHHHHHHh------------cCCceEEEec
Confidence 467799999999999999999999999987 889998 5321 1111 111110 0147889999
Q ss_pred cCCCC----CCCCCHHHHHHHhc-------cccEEEEcceeccc-------c-----------ccHHHHHhhhHHHHHHH
Q psy17679 119 DCSLP----GLGLSETDRATLVK-------QVNIVFHGAATVRF-------D-----------EHIKMAVKINVCGVQAM 169 (303)
Q Consensus 119 Dl~d~----~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~-----------~~~~~~~~~N~~~~~~l 169 (303)
|+++. + ++..+++ ++|++|||||.... . ..+...+++|+.++..+
T Consensus 70 Dl~~~~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 143 (276)
T 1mxh_A 70 DLSLSSSLLD------CCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFL 143 (276)
T ss_dssp CCSSSTTHHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHH
T ss_pred cCCCccccHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHH
Confidence 99998 5 4555544 78999999997432 1 45567899999999999
Q ss_pred HHHHHhc--CCC------ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEee
Q psy17679 170 LQLAREM--KDL------KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISG 235 (303)
Q Consensus 170 l~~a~~~--~~~------~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~ 235 (303)
++++.+. ++. .+||++||..+.. +......|..+|...+.+.+.+...+ . ++++
T Consensus 144 ~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~ 211 (276)
T 1mxh_A 144 IRAFARRQGEGGAWRSRNLSVVNLCDAMTDL------------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVA 211 (276)
T ss_dssp HHHHHHTC-------CCCEEEEEECCGGGGS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred HHHHHHHHhcCCCCCCCCcEEEEECchhhcC------------CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEe
Confidence 9999874 133 7999999996653 22345568888888888877665433 2 7888
Q ss_pred cceecCccC-hHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 236 TGWIDNVYG-PIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 236 pg~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
||++.+.-. +......+.. .. ...+++++++|+|+++++++....
T Consensus 212 PG~v~t~~~~~~~~~~~~~~----~~----p~~r~~~~~~dva~~v~~l~s~~~ 257 (276)
T 1mxh_A 212 PGLSLLPPAMPQETQEEYRR----KV----PLGQSEASAAQIADAIAFLVSKDA 257 (276)
T ss_dssp ESSBSCCSSSCHHHHHHHHT----TC----TTTSCCBCHHHHHHHHHHHHSGGG
T ss_pred cCcccCCccCCHHHHHHHHh----cC----CCCCCCCCHHHHHHHHHHHhCccc
Confidence 997754410 0111111111 11 112237899999999999987543
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.83 E-value=9.8e-20 Score=160.32 Aligned_cols=214 Identities=12% Similarity=0.048 Sum_probs=145.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||++++++|++.|+. |++++|+.. ++++... ....++.++.+|+
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dl 71 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGAT---VIMAVRDTR------KGEAAAR------------TMAGQVEVRELDL 71 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHT------------TSSSEEEEEECCT
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHH------------HhcCCeeEEEcCC
Confidence 467899999999999999999999999987 999999743 2222111 1125789999999
Q ss_pred CCCCCCCCHHHHHHHhc---cccEEEEcceeccc-----cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC
Q psy17679 121 SLPGLGLSETDRATLVK---QVNIVFHGAATVRF-----DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC 192 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~---~~dvVi~~a~~~~~-----~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~ 192 (303)
+|.+ ++..+++ ++|++|||||.... ...++..+++|+.++..+++++.+. ..+|||++||..+..
T Consensus 72 ~d~~------~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~riv~isS~~~~~ 144 (291)
T 3rd5_A 72 QDLS------SVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-LTDRVVTVSSMAHWP 144 (291)
T ss_dssp TCHH------HHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-EEEEEEEECCGGGTT
T ss_pred CCHH------HHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhheeEeechhhcc
Confidence 9976 6777776 67999999997542 3456788999999999999999988 678999999996654
Q ss_pred CCCccccCC-CCCCCChhhHHHHHHHHHHHHHHhhCcCC------c--EEeecceecCccChHHHHHHHHhhhhhhccCC
Q psy17679 193 PRERIDEEF-YPVPLKYENLIQLISETGDEELSEMTPNR------V--HISGTGWIDNVYGPIGMLVGIATGVLHTHLIN 263 (303)
Q Consensus 193 ~~~~~~E~~-~~~~~~~~~~~~~~k~~~E~~~~~~~~~~------~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (303)
......+.. ...+..+...|..+|...+.+.+.+...+ . +.+.||++.+....... ... ... +. .
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~-~~~-~~~---~~-~ 218 (291)
T 3rd5_A 145 GRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASG-RKL-GDA---LM-S 218 (291)
T ss_dssp CCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------
T ss_pred CCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccc-hHH-HHH---HH-H
Confidence 322121111 12345677789999988888777664432 2 67779987654432210 000 000 00 0
Q ss_pred CCccccceehhHHHHHHHHHHhhcc
Q psy17679 264 LNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 264 ~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....+-..+.+|+|++++.++.++.
T Consensus 219 ~~~~~~~~~~~~~A~~~~~l~~~~~ 243 (291)
T 3rd5_A 219 AATRVVATDADFGARQTLYAASQDL 243 (291)
T ss_dssp ------CHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHhCCHHHHHHHHHHHHcCCC
Confidence 1111223469999999999998753
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-19 Score=159.39 Aligned_cols=212 Identities=10% Similarity=0.052 Sum_probs=139.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+||||||+|+||+++++.|+++|+. |++++|+.... .+..+++... ..++.++.+|+
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~---V~~~~r~~~~~--~~~~~~l~~~-------------~~~~~~~~~Dv 89 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGAR---LVLSDVDQPAL--EQAVNGLRGQ-------------GFDAHGVVCDV 89 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHT-------------TCCEEEEECCT
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHHH--HHHHHHHHhc-------------CCceEEEEccC
Confidence 467899999999999999999999999987 88999974321 1111111111 25788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC-CceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD-LKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~-~~r~ 182 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. .+ ..+|
T Consensus 90 ~d~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~i 163 (301)
T 3tjr_A 90 RHLD------EMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHI 163 (301)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEE
T ss_pred CCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence 9976 5555554 78999999997532 2345678999999999999887542 13 5699
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHH----H
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVG----I 252 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~----~ 252 (303)
|++||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+.+........ .
T Consensus 164 v~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~ 231 (301)
T 3tjr_A 164 AFTASFAGLV------------PNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYG 231 (301)
T ss_dssp EEECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-----
T ss_pred EEeCchhhcC------------CCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhc
Confidence 9999997653 23345678888887777776654433 2 78889977554422211000 0
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....+...++.......+++++|+|++++.++..+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~~ 267 (301)
T 3tjr_A 232 MSATPEGAFGPLPTQDESVSADDVARLTADAILANR 267 (301)
T ss_dssp -----------------CCCHHHHHHHHHHHHHHTC
T ss_pred cccChhhhccccccccCCCCHHHHHHHHHHHHhcCC
Confidence 001111112223344568999999999999998764
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.1e-19 Score=153.95 Aligned_cols=198 Identities=14% Similarity=0.162 Sum_probs=139.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+||||+|+||+++++.|++.|++ |++++|+.. .++++... ..++.++.+|++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~~-------------~~~~~~~~~D~~ 62 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGAR---VVAVSRTQA------DLDSLVRE-------------CPGIEPVCVDLG 62 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-------------STTCEEEECCTT
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-------------cCCCCEEEEeCC
Confidence 56789999999999999999999999987 889998642 22222211 135677899999
Q ss_pred CCCCCCCHHHHHHHhc---cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC-CceEEEEeC
Q psy17679 122 LPGLGLSETDRATLVK---QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD-LKAFVHVST 187 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~---~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~-~~r~i~iSS 187 (303)
|.+ ++..+++ ++|+|||+||.... ...+...+++|+.++.++++++.+. ++ ..+||++||
T Consensus 63 ~~~------~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS 136 (244)
T 3d3w_A 63 DWE------ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSS 136 (244)
T ss_dssp CHH------HHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred CHH------HHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCc
Confidence 876 6777765 68999999997532 2345678899999999888887653 13 679999999
Q ss_pred CcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH-----HHHHHHhhh
Q psy17679 188 AFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG-----MLVGIATGV 256 (303)
Q Consensus 188 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~-----~~~~~~~~~ 256 (303)
..+.. +..+...|..+|...|.+.+.+...+ . ++++||++.+...... ....+..
T Consensus 137 ~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-- 202 (244)
T 3d3w_A 137 QCSQR------------AVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLN-- 202 (244)
T ss_dssp GGGTS------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHH--
T ss_pred hhhcc------------CCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHh--
Confidence 96643 22345678888888998888765432 2 7888987755432211 1111111
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+++++|+|++++.++.++.
T Consensus 203 -------~~~~~~~~~~~dva~~~~~l~~~~~ 227 (244)
T 3d3w_A 203 -------RIPLGKFAEVEHVVNAILFLLSDRS 227 (244)
T ss_dssp -------TCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred -------hCCCCCCcCHHHHHHHHHHHcCccc
Confidence 1122468999999999999997653
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-19 Score=151.85 Aligned_cols=189 Identities=16% Similarity=0.115 Sum_probs=129.7
Q ss_pred CcEEEEeCCcchhHHHHHHHHH-hcCCCccEEEEEeCCCC-cccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLL-RSCPHLKHIYLLVRPKK-GKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll-~~g~~v~~V~~~~R~~~-~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+|+|+||||+|+||+++++.|+ +.|++ |++++|++. ... ++.. ...++.++.+|++
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~---V~~~~r~~~~~~~------~~~~-------------~~~~~~~~~~D~~ 62 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMH---ITLYGRQLKTRIP------PEII-------------DHERVTVIEGSFQ 62 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCE---EEEEESSHHHHSC------HHHH-------------TSTTEEEEECCTT
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCce---EEEEecCccccch------hhcc-------------CCCceEEEECCCC
Confidence 4679999999999999999999 88887 999999743 221 1110 1268899999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCC-ccccC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRE-RIDEE 200 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~-~~~E~ 200 (303)
|.+ ++..+++++|+|||+||.. |+. +.++++++++. +.+|||++||..+..... ...+.
T Consensus 63 d~~------~~~~~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~~-~~~~iv~iSs~~~~~~~~~~~~~~ 122 (221)
T 3r6d_A 63 NPG------XLEQAVTNAEVVFVGAMES------------GSD-MASIVKALSRX-NIRRVIGVSMAGLSGEFPVALEKW 122 (221)
T ss_dssp CHH------HHHHHHTTCSEEEESCCCC------------HHH-HHHHHHHHHHT-TCCEEEEEEETTTTSCSCHHHHHH
T ss_pred CHH------HHHHHHcCCCEEEEcCCCC------------Chh-HHHHHHHHHhc-CCCeEEEEeeceecCCCCcccccc
Confidence 876 7889999999999999963 333 78899999887 889999999996654211 00000
Q ss_pred CCCCCCChhh-HHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHH
Q psy17679 201 FYPVPLKYEN-LIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNS 279 (303)
Q Consensus 201 ~~~~~~~~~~-~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a 279 (303)
. ..... .|..+|...|.+++... -..++++||++.+..+. +..............+++.+|+|++
T Consensus 123 ~----~~~~~~~y~~~K~~~e~~~~~~~-i~~~~vrpg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~dvA~~ 188 (221)
T 3r6d_A 123 T----FDNLPISYVQGERQARNVLRESN-LNYTILRLTWLYNDPEX---------TDYELIPEGAQFNDAQVSREAVVKA 188 (221)
T ss_dssp H----HHTSCHHHHHHHHHHHHHHHHSC-SEEEEEEECEEECCTTC---------CCCEEECTTSCCCCCEEEHHHHHHH
T ss_pred c----ccccccHHHHHHHHHHHHHHhCC-CCEEEEechhhcCCCCC---------cceeeccCCccCCCceeeHHHHHHH
Confidence 0 00111 57788888898887532 11289999987543211 1111111111112238999999999
Q ss_pred HHHHH--hhcc
Q psy17679 280 MISIA--WSIG 288 (303)
Q Consensus 280 i~~~~--~~~~ 288 (303)
++.++ .++.
T Consensus 189 ~~~l~~~~~~~ 199 (221)
T 3r6d_A 189 IFDILHAADET 199 (221)
T ss_dssp HHHHHTCSCCG
T ss_pred HHHHHHhcChh
Confidence 99999 7664
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-19 Score=155.03 Aligned_cols=205 Identities=14% Similarity=0.106 Sum_probs=128.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEE-eCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLL-VRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~-~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++|+|+||||+|+||+++++.|+++|++ |+++ .|++.. .+.+.+.+.. ...++.++.+|+
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~~---V~~~~~r~~~~---~~~~~~~~~~------------~~~~~~~~~~D~ 64 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGAN---IVLNGSPASTS---LDATAEEFKA------------AGINVVVAKGDV 64 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEECTTCSH---HHHHHHHHHH------------TTCCEEEEESCT
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCcCHHH---HHHHHHHHHh------------cCCcEEEEECCC
Confidence 46789999999999999999999999987 7777 555432 1121111110 125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++..+++ ++|+||||||.... ...+...+++|+.++.++++++.+. .+..+||
T Consensus 65 ~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv 138 (247)
T 2hq1_A 65 KNPE------DVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKII 138 (247)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9876 5665554 79999999997532 2345678899999998888777642 2568999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+... ......|..+|...+.+.+.+...+ . ++++||++.+..... +......
T Consensus 139 ~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~--- 202 (247)
T 2hq1_A 139 NITSIAGIIG------------NAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV-LPDKVKE--- 202 (247)
T ss_dssp EECC---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHH---
T ss_pred EEcChhhccC------------CCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh-cchHHHH---
Confidence 9999854321 1234567788888888877664432 2 788898764432110 0000000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. +........+++++|+|++++.++..+.
T Consensus 203 -~-~~~~~~~~~~~~~~dva~~~~~l~~~~~ 231 (247)
T 2hq1_A 203 -M-YLNNIPLKRFGTPEEVANVVGFLASDDS 231 (247)
T ss_dssp -H-HHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred -H-HHhhCCCCCCCCHHHHHHHHHHHcCccc
Confidence 0 1111122357899999999999887653
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.9e-20 Score=155.69 Aligned_cols=191 Identities=12% Similarity=0.049 Sum_probs=123.0
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcC-CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSC-PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g-~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
.+++|+||||||+|+||+++++.|++.| +. |++++|++..... ....++.++.+|
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~---V~~~~R~~~~~~~---------------------~~~~~~~~~~~D 75 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIK---QTLFARQPAKIHK---------------------PYPTNSQIIMGD 75 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEE---EEEEESSGGGSCS---------------------SCCTTEEEEECC
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCce---EEEEEcChhhhcc---------------------cccCCcEEEEec
Confidence 4667899999999999999999999998 66 9999998643210 112588999999
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCC-ccc
Q psy17679 120 CSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRE-RID 198 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~-~~~ 198 (303)
++|.+ ++..+++++|+|||+++.... ...+.++++++++. +++|||++||..+..... ...
T Consensus 76 l~d~~------~~~~~~~~~D~vv~~a~~~~~-----------~~~~~~~~~~~~~~-~~~~iV~iSS~~~~~~~~~~~~ 137 (236)
T 3qvo_A 76 VLNHA------ALKQAMQGQDIVYANLTGEDL-----------DIQANSVIAAMKAC-DVKRLIFVLSLGIYDEVPGKFV 137 (236)
T ss_dssp TTCHH------HHHHHHTTCSEEEEECCSTTH-----------HHHHHHHHHHHHHT-TCCEEEEECCCCC---------
T ss_pred CCCHH------HHHHHhcCCCEEEEcCCCCch-----------hHHHHHHHHHHHHc-CCCEEEEEecceecCCCCcccc
Confidence 99876 789999999999999985321 12356889999888 889999999986543211 111
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHH
Q psy17679 199 EEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVN 278 (303)
Q Consensus 199 E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ 278 (303)
+.....+..++..|..+ |..+... .-..++++||++.+..... . ............+++++|+|+
T Consensus 138 ~~~~~~~~~~~~~~~~~----~~~l~~~-gi~~~~vrPg~i~~~~~~~---------~-~~~~~~~~~~~~~i~~~DvA~ 202 (236)
T 3qvo_A 138 EWNNAVIGEPLKPFRRA----ADAIEAS-GLEYTILRPAWLTDEDIID---------Y-ELTSRNEPFKGTIVSRKSVAA 202 (236)
T ss_dssp -------CGGGHHHHHH----HHHHHTS-CSEEEEEEECEEECCSCCC---------C-EEECTTSCCSCSEEEHHHHHH
T ss_pred cchhhcccchHHHHHHH----HHHHHHC-CCCEEEEeCCcccCCCCcc---------e-EEeccCCCCCCcEECHHHHHH
Confidence 11111122334444443 4444321 1112899999875432210 0 011111112235899999999
Q ss_pred HHHHHHhhcc
Q psy17679 279 SMISIAWSIG 288 (303)
Q Consensus 279 ai~~~~~~~~ 288 (303)
+++.++.++.
T Consensus 203 ~i~~ll~~~~ 212 (236)
T 3qvo_A 203 LITDIIDKPE 212 (236)
T ss_dssp HHHHHHHSTT
T ss_pred HHHHHHcCcc
Confidence 9999999876
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.6e-20 Score=158.53 Aligned_cols=204 Identities=14% Similarity=0.119 Sum_probs=139.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC-CCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP-KKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~-~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
.+++|+|+||||+|+||+++++.|+++|++ |++++|+ +... .+..+++... ..++.++.+|
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~---V~~~~r~~~~~~--~~~~~~~~~~-------------~~~~~~~~~D 65 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAK---VGLHGRKAPANI--DETIASMRAD-------------GGDAAFFAAD 65 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCCTTH--HHHHHHHHHT-------------TCEEEEEECC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEECCCchhhH--HHHHHHHHhc-------------CCceEEEECC
Confidence 467799999999999999999999999987 8999997 4321 1111111110 2578899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEccee-ccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC--C
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAAT-VRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD--L 179 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~-~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~--~ 179 (303)
++|.+ ++..+++ ++|+|||+||. ... ...+...+++|+.++..+++++.+. .+ .
T Consensus 66 ~~~~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 139 (258)
T 3afn_B 66 LATSE------ACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKAS 139 (258)
T ss_dssp TTSHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCC
Confidence 99876 5666665 79999999996 321 1235678899999999888876532 02 2
Q ss_pred ---ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH---H
Q psy17679 180 ---KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI---G 247 (303)
Q Consensus 180 ---~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~---~ 247 (303)
.+||++||.++... +..+...|..+|...+.+.+.+...+ . ++++||++.+..... .
T Consensus 140 ~~~~~iv~~sS~~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~ 208 (258)
T 3afn_B 140 GQTSAVISTGSIAGHTG-----------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQD 208 (258)
T ss_dssp TSCEEEEEECCTHHHHC-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHH
T ss_pred CCCcEEEEecchhhccC-----------CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHH
Confidence 79999999966431 12245567888888888887665432 2 788898775433211 1
Q ss_pred HHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 248 MLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....+.. ......+++++|+|++++.++.++.
T Consensus 209 ~~~~~~~---------~~~~~~~~~~~dva~~~~~l~~~~~ 240 (258)
T 3afn_B 209 VRDRISN---------GIPMGRFGTAEEMAPAFLFFASHLA 240 (258)
T ss_dssp HHHHHHT---------TCTTCSCBCGGGTHHHHHHHHCHHH
T ss_pred HHHHHhc---------cCCCCcCCCHHHHHHHHHHHhCcch
Confidence 1111111 1122468999999999999987653
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=6.7e-20 Score=157.22 Aligned_cols=204 Identities=12% Similarity=0.106 Sum_probs=135.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|++ |++++|+... .+.+.+.+... ...++.++.+|++
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~~-----------~~~~~~~~~~D~~ 67 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGST---VIITGTSGER---AKAVAEEIANK-----------YGVKAHGVEMNLL 67 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHHHHHHHH-----------HCCCEEEEECCTT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCChHH---HHHHHHHHHhh-----------cCCceEEEEccCC
Confidence 56789999999999999999999999987 8899996421 11111111100 0147889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i 183 (303)
|.+ ++..+++ ++|+|||+||.... ...+...+++|+.++.++++.+. +. +.++||
T Consensus 68 ~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv 140 (248)
T 2pnf_A 68 SEE------SINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-RWGRIV 140 (248)
T ss_dssp CHH------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-TCEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 876 5666655 79999999997542 22456788999999977766654 33 678999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+... ......|..+|...+.+.+.+...+ . ++++||++.+..... +.........
T Consensus 141 ~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~ 207 (248)
T 2pnf_A 141 NISSVVGFTG------------NVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV-LSEEIKQKYK 207 (248)
T ss_dssp EECCHHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHH
T ss_pred EEccHHhcCC------------CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh-ccHHHHHHHH
Confidence 9999854321 1134567778887777777654332 2 788898765443211 0000000000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.. .....+++++|+|++++.++...
T Consensus 208 ~~-----~~~~~~~~~~dva~~~~~l~~~~ 232 (248)
T 2pnf_A 208 EQ-----IPLGRFGSPEEVANVVLFLCSEL 232 (248)
T ss_dssp HT-----CTTSSCBCHHHHHHHHHHHHSGG
T ss_pred hc-----CCCCCccCHHHHHHHHHHHhCch
Confidence 00 11234789999999999998764
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.4e-19 Score=154.09 Aligned_cols=207 Identities=13% Similarity=0.110 Sum_probs=136.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHH-HHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
.+++|+|+||||+|+||++++++|++.|++ |++++|+... ..+.+ +.+.. ...++.++.+|
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~---V~~~~r~~~~--~~~~~~~~l~~-------------~~~~~~~~~~D 65 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAK---VVVNYRSKED--EANSVLEEIKK-------------VGGEAIAVKGD 65 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHHHH-------------TTCEEEEEECC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEcCCChH--HHHHHHHHHHh-------------cCCceEEEECC
Confidence 467799999999999999999999999987 8899983211 11111 11111 12468899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC-Cce
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD-LKA 181 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~-~~r 181 (303)
+++.+ ++..+++ ++|+||||||.... ...+...+++|+.++..+++++.+. .+ ..+
T Consensus 66 ~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~ 139 (261)
T 1gee_A 66 VTVES------DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGT 139 (261)
T ss_dssp TTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCE
Confidence 99876 5555554 78999999997532 2345678899999998888777543 13 579
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhh
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATG 255 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~ 255 (303)
||++||..+.. +..+...|..+|...+.+.+.+... .. ++++||++.+..............
T Consensus 140 iv~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~ 207 (261)
T 1gee_A 140 VINMSSVHEKI------------PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRA 207 (261)
T ss_dssp EEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHH
T ss_pred EEEeCCHHhcC------------CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHH
Confidence 99999986542 2234567888887777776655433 22 788898775544321110000000
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.. . .......+++++|+|++++.++...
T Consensus 208 ~~---~-~~~~~~~~~~~~dva~~~~~l~~~~ 235 (261)
T 1gee_A 208 DV---E-SMIPMGYIGEPEEIAAVAAWLASSE 235 (261)
T ss_dssp HH---H-TTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HH---H-hcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 00 0 0111234789999999999998754
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.4e-19 Score=156.19 Aligned_cols=216 Identities=12% Similarity=0.076 Sum_probs=139.6
Q ss_pred ccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 39 QEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 39 ~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
...+++|++|||||+|+||+++++.|++.|+. |++++|+... ..+.+.+.+. . ....++.++.+
T Consensus 20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~---V~~~~r~~~~--~~~~~~~~~~--------~---~~~~~~~~~~~ 83 (281)
T 3v2h_A 20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGAN---IVLNGFGAPD--EIRTVTDEVA--------G---LSSGTVLHHPA 83 (281)
T ss_dssp --CCTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEECCCCHH--HHHHHHHHHH--------T---TCSSCEEEECC
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCChH--HHHHHHHHHh--------h---ccCCcEEEEeC
Confidence 34577899999999999999999999999987 8888885321 1111111111 0 01257889999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCce
Q psy17679 119 DCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKA 181 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r 181 (303)
|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. ++..+
T Consensus 84 Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~ 157 (281)
T 3v2h_A 84 DMTKPS------EIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGR 157 (281)
T ss_dssp CTTCHH------HHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred CCCCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCE
Confidence 999976 5555554 78999999998532 2345678999999999999887432 25679
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHH---
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGI--- 252 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~--- 252 (303)
||++||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+...........
T Consensus 158 iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~ 225 (281)
T 3v2h_A 158 IINIASAHGLV------------ASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTR 225 (281)
T ss_dssp EEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--------------
T ss_pred EEEECCccccc------------CCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhc
Confidence 99999996653 22244568888887888777665443 2 788899775443211110000
Q ss_pred --Hh-hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 --AT-GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 --~~-~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. ......+..+.....+++++|+|++++.++....
T Consensus 226 ~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a 264 (281)
T 3v2h_A 226 GITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDA 264 (281)
T ss_dssp --------------CCTTCSCBCHHHHHHHHHHHHSSGG
T ss_pred CCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCc
Confidence 00 0001112233445678999999999999987654
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=155.38 Aligned_cols=203 Identities=11% Similarity=0.073 Sum_probs=138.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|+. |++++|.... ..+.+.+.+.. ...++.++.+|++
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~---V~~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~Dv~ 64 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYN---VAVNYAGSKE--KAEAVVEEIKA------------KGVDSFAIQANVA 64 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHHHH------------TTSCEEEEECCTT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCCHH--HHHHHHHHHHh------------cCCcEEEEEccCC
Confidence 35689999999999999999999999997 7777775321 11111111110 1257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i 183 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++. +. +..+||
T Consensus 65 d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv 137 (246)
T 3osu_A 65 DAD------EVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-RSGAII 137 (246)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEE
Confidence 976 5655554 78999999997532 23456789999999999999884 33 567999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccCh---HHHHHHHHh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGP---IGMLVGIAT 254 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~---~~~~~~~~~ 254 (303)
++||..+... ......|..+|...+.+.+.+... .. +.++||++.+.... ......+..
T Consensus 138 ~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~ 205 (246)
T 3osu_A 138 NLSSVVGAVG------------NPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLT 205 (246)
T ss_dssp EECCHHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHT
T ss_pred EEcchhhcCC------------CCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHh
Confidence 9999855421 224556778888777777765543 22 78889977544321 111111111
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
......+.+.+|+|+++++++..+..
T Consensus 206 ---------~~p~~r~~~~~dva~~v~~l~s~~~~ 231 (246)
T 3osu_A 206 ---------QIPLARFGQDTDIANTVAFLASDKAK 231 (246)
T ss_dssp ---------TCTTCSCBCHHHHHHHHHHHTSGGGT
T ss_pred ---------cCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 11223467899999999999876543
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.7e-19 Score=155.13 Aligned_cols=207 Identities=11% Similarity=0.102 Sum_probs=137.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|++.|++ |++++|+.. .++++... ...++.++.+|++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~ 68 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGAT---VAIADLDVM------AAQAVVAG------------LENGGFAVEVDVT 68 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHT------------CTTCCEEEECCTT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH------------HhcCCeEEEEeCC
Confidence 56789999999999999999999999987 889999642 22222110 0126788999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC-CceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD-LKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~-~~r~i 183 (303)
|.+ ++..+++ ++|+||||||.... ...+...+++|+.++..+++++.+. .+ ..+||
T Consensus 69 d~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv 142 (263)
T 3ak4_A 69 KRA------SVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIV 142 (263)
T ss_dssp CHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 876 5666655 79999999997532 2345678899999999998887653 13 57999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHH--Hh-
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGI--AT- 254 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~--~~- 254 (303)
++||..+... ......|..+|...+.+.+.+...+ . ++++||++.+.+... ..... ..
T Consensus 143 ~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~ 209 (263)
T 3ak4_A 143 NTASLAAKVG------------APLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQER-EIIWEAELRG 209 (263)
T ss_dssp EECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHH-HHHHHHHHHT
T ss_pred EecccccccC------------CCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhh-hccccccccc
Confidence 9999865432 2234567788887887777664432 2 788898764433111 10000 00
Q ss_pred ---hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 ---GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ---~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+........+++++|+|++++.++..+.
T Consensus 210 ~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~ 246 (263)
T 3ak4_A 210 MTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAA 246 (263)
T ss_dssp SCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred cCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 0000001111122358899999999999987653
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.1e-19 Score=156.03 Aligned_cols=215 Identities=14% Similarity=0.132 Sum_probs=140.9
Q ss_pred cccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEE
Q psy17679 38 MQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVA 117 (303)
Q Consensus 38 ~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~ 117 (303)
|...+++|++|||||+|+||+++++.|++.|+. |++++|+.... .+..+++.. ...++.++.
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~-------------~~~~~~~~~ 66 (264)
T 3ucx_A 5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGAD---LVLAARTVERL--EDVAKQVTD-------------TGRRALSVG 66 (264)
T ss_dssp --CTTTTCEEEEESCCTTHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHH-------------TTCCEEEEE
T ss_pred cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCE---EEEEeCCHHHH--HHHHHHHHh-------------cCCcEEEEE
Confidence 444578899999999999999999999999987 88999964211 111111111 125788999
Q ss_pred ecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc--CCCc
Q psy17679 118 GDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM--KDLK 180 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~ 180 (303)
+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. ....
T Consensus 67 ~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g 140 (264)
T 3ucx_A 67 TDITDDA------QVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKG 140 (264)
T ss_dssp CCTTCHH------HHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTC
T ss_pred cCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 9999976 5555554 78999999987421 2345678999999999998887643 0126
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHh
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIAT 254 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~ 254 (303)
+||++||..+.. +...+..|..+|...+.+.+.++..+ . +.+.||++.+.............
T Consensus 141 ~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~ 208 (264)
T 3ucx_A 141 AVVNVNSMVVRH------------SQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGK 208 (264)
T ss_dssp EEEEECCGGGGC------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHH
T ss_pred EEEEECcchhcc------------CCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhh
Confidence 999999996653 23345678888887888777665432 2 78889876433211111000000
Q ss_pred -----hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 -----GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 -----~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+........+.+++|+|+++++++....
T Consensus 209 ~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~ 247 (264)
T 3ucx_A 209 YGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLA 247 (264)
T ss_dssp TTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSGGG
T ss_pred cCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCccc
Confidence 0001111122233457899999999999987654
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=150.33 Aligned_cols=172 Identities=13% Similarity=0.127 Sum_probs=128.6
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|+||||+|+||+++++.|+ +|++ |++++|++. ++.+|+++.+
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~---V~~~~r~~~--------------------------------~~~~D~~~~~ 47 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAE---VITAGRHSG--------------------------------DVTVDITNID 47 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSE---EEEEESSSS--------------------------------SEECCTTCHH
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCe---EEEEecCcc--------------------------------ceeeecCCHH
Confidence 589999999999999999999 9987 889998632 4689999876
Q ss_pred CCCCHHHHHHHhcc---ccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeCCcccCC
Q psy17679 125 LGLSETDRATLVKQ---VNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVSTAFTHCP 193 (303)
Q Consensus 125 ~~~~~~~~~~~~~~---~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS~~~~~~ 193 (303)
++..++++ +|+|||+||.... ...+...+++|+.++.++++++.+. .+..+||++||.++..
T Consensus 48 ------~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~- 120 (202)
T 3d7l_A 48 ------SIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED- 120 (202)
T ss_dssp ------HHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS-
T ss_pred ------HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC-
Confidence 66666664 8999999996532 1234567889999999999999875 1126999999986643
Q ss_pred CCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC--c---EEeecceecCccChHHHHHHHHhhhhhhccCCCCccc
Q psy17679 194 RERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR--V---HISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVT 268 (303)
Q Consensus 194 ~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~--~---~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 268 (303)
+......|..+|...|.+.+.+...+ . ++++||++ +++... . +.....+
T Consensus 121 -----------~~~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v---~~~~~~---~---------~~~~~~~ 174 (202)
T 3d7l_A 121 -----------PIVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVL---EESWDK---L---------EPFFEGF 174 (202)
T ss_dssp -----------CCTTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCB---GGGHHH---H---------GGGSTTC
T ss_pred -----------CCCccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCcc---CCchhh---h---------hhhcccc
Confidence 22345678888999999998877543 2 78889865 333211 0 1112245
Q ss_pred cceehhHHHHHHHHHHh
Q psy17679 269 DMVPVDLVVNSMISIAW 285 (303)
Q Consensus 269 ~~i~v~D~a~ai~~~~~ 285 (303)
++++++|+|++++.++.
T Consensus 175 ~~~~~~dva~~~~~~~~ 191 (202)
T 3d7l_A 175 LPVPAAKVARAFEKSVF 191 (202)
T ss_dssp CCBCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhhh
Confidence 68999999999998874
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.3e-19 Score=156.16 Aligned_cols=217 Identities=11% Similarity=0.004 Sum_probs=132.3
Q ss_pred CCCCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCC
Q psy17679 32 DEIGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRS 111 (303)
Q Consensus 32 ~~~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 111 (303)
+.+.+.|...+++|++|||||+|+||+++++.|++.|+. |++++|.... ...+..+++.. ...
T Consensus 17 n~~~~~mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~~~~~~-~~~~~~~~~~~-------------~~~ 79 (280)
T 4da9_A 17 NLYFQSMMTQKARPVAIVTGGRRGIGLGIARALAASGFD---IAITGIGDAE-GVAPVIAELSG-------------LGA 79 (280)
T ss_dssp ------CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCCHH-HHHHHHHHHHH-------------TTC
T ss_pred chhhhhhhhccCCCEEEEecCCCHHHHHHHHHHHHCCCe---EEEEeCCCHH-HHHHHHHHHHh-------------cCC
Confidence 444455555677899999999999999999999999997 8888864321 11111111111 125
Q ss_pred ceEEEEecCCCCCCCCCHHHHHHHhc-------cccEEEEcceecc---------ccccHHHHHhhhHHHHHHHHHHHHh
Q psy17679 112 KVSAVAGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVR---------FDEHIKMAVKINVCGVQAMLQLARE 175 (303)
Q Consensus 112 ~v~~~~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~---------~~~~~~~~~~~N~~~~~~ll~~a~~ 175 (303)
++.++.+|++|.+ ++..+++ ++|++|||||... ....+...+++|+.++..+++++.+
T Consensus 80 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 153 (280)
T 4da9_A 80 RVIFLRADLADLS------SHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLK 153 (280)
T ss_dssp CEEEEECCTTSGG------GHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred cEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 7899999999987 4555554 7899999999732 1234677889999999988888765
Q ss_pred c---CC---CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCcc
Q psy17679 176 M---KD---LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVY 243 (303)
Q Consensus 176 ~---~~---~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~ 243 (303)
. .+ ..+||++||..+.. +......|..+|...+.+.+.++.. .. +.+.||++.+..
T Consensus 154 ~~~~~~~~~~g~Iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 221 (280)
T 4da9_A 154 AMLASDARASRSIINITSVSAVM------------TSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDM 221 (280)
T ss_dssp HHHHHCCCCCEEEEEECCC-------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred HHHHhCCCCCCEEEEEcchhhcc------------CCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCc
Confidence 4 12 46899999996542 2223456778888788777765433 22 788899775443
Q ss_pred ChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 244 GPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 244 g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.... . ................+..++|+|+++++++....
T Consensus 222 ~~~~-~----~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~ 261 (280)
T 4da9_A 222 TAAV-S----GKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQF 261 (280)
T ss_dssp -------------------------CCBCHHHHHHHHHHHHTSTT
T ss_pred hhhc-c----hhHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCccc
Confidence 2111 0 00000000001122347889999999999987654
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=9.2e-19 Score=150.70 Aligned_cols=204 Identities=12% Similarity=0.099 Sum_probs=135.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCce-EEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKV-SAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v-~~~~~Dl 120 (303)
+++|+++||||+|+||+++++.|+++|++ |++++|+.. .++++... + ..++ .++.+|+
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----~-------~~~~~~~~~~D~ 67 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGAR---LILIDREAA------ALDRAAQE-----L-------GAAVAARIVADV 67 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----H-------GGGEEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-----h-------cccceeEEEEec
Confidence 56789999999999999999999999987 999999742 22221111 0 1355 7899999
Q ss_pred CCCCCCCCHHHHHHHh------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEE
Q psy17679 121 SLPGLGLSETDRATLV------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i 183 (303)
+|.+ ++..++ .++|+|||+||.... ...+...+++|+.++..+++++. +. +.++||
T Consensus 68 ~~~~------~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv 140 (254)
T 2wsb_A 68 TDAE------AMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR-GAGAIV 140 (254)
T ss_dssp TCHH------HHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred CCHH------HHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 9876 555554 478999999997542 22356788999999877777664 33 678999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH-HHHHhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML-VGIATGV 256 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~-~~~~~~~ 256 (303)
++||..+.... |..+...|..+|...+.+.+.+...+ . ++++||++.+........ .......
T Consensus 141 ~isS~~~~~~~----------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 210 (254)
T 2wsb_A 141 NLGSMSGTIVN----------RPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETW 210 (254)
T ss_dssp EECCGGGTSCC----------SSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHH
T ss_pred EEecchhccCC----------CCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHH
Confidence 99999664321 22233667888888888887665442 2 788898664332111000 0000000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. ......+++++|+|++++.++..+.
T Consensus 211 -~~----~~~~~~~~~~~dva~~~~~l~~~~~ 237 (254)
T 2wsb_A 211 -LD----MTPMGRCGEPSEIAAAALFLASPAA 237 (254)
T ss_dssp -HH----TSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred -Hh----cCCCCCCCCHHHHHHHHHHHhCccc
Confidence 00 1112357899999999999987543
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.7e-19 Score=154.33 Aligned_cols=207 Identities=8% Similarity=0.015 Sum_probs=132.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|++.|+. |++++|+..... +..+++... ..++.++.+|+
T Consensus 4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~~~~--~~~~~~~~~-------------~~~~~~~~~Dv 65 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFT---VFAGRRNGEKLA--PLVAEIEAA-------------GGRIVARSLDA 65 (252)
T ss_dssp -CCSCEEEEECCSSHHHHHHHHHHHHTTCE---EEEEESSGGGGH--HHHHHHHHT-------------TCEEEEEECCT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHHHH--HHHHHHHhc-------------CCeEEEEECcC
Confidence 356799999999999999999999999987 999999754322 111222111 25789999999
Q ss_pred CCCCCCCCHHHHHHHhc------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 121 SLPGLGLSETDRATLVK------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ++..+||+
T Consensus 66 ~~~~------~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~ 139 (252)
T 3h7a_A 66 RNED------EVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFF 139 (252)
T ss_dssp TCHH------HHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 9976 5666655 68999999997532 2345678999999998888877542 15579999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c---EEeecceecCccChHHHHHHHHhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V---HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~---~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
+||..+.. +......|..+|...+.+.+.+...+ . +++.||++.+...... .....
T Consensus 140 isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~-----~~~~~ 202 (252)
T 3h7a_A 140 TGATASLR------------GGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER-----REQMF 202 (252)
T ss_dssp EEEGGGTC------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------
T ss_pred ECCHHHcC------------CCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc-----chhhh
Confidence 99996643 22345667888877777777665433 2 3577987654432211 00000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcccC
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
.. +....... ++..+|+|++++.++..+...
T Consensus 203 ~~-~~~~~~~~-~~~pedvA~~~~~l~s~~~~~ 233 (252)
T 3h7a_A 203 GK-DALANPDL-LMPPAAVAGAYWQLYQQPKSA 233 (252)
T ss_dssp -------------CCHHHHHHHHHHHHHCCGGG
T ss_pred hh-hhhcCCcc-CCCHHHHHHHHHHHHhCchhc
Confidence 00 11111122 889999999999999866543
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.1e-19 Score=153.73 Aligned_cols=208 Identities=13% Similarity=0.109 Sum_probs=139.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|+++|++ |++++|+.... .+..+++... ..++.++.+|+
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~--~~~~~~l~~~-------------~~~~~~~~~D~ 72 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGAH---VVVSSRKQENV--DRTVATLQGE-------------GLSVTGTVCHV 72 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHT-------------TCCEEEEECCT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHhc-------------CCceEEEEccC
Confidence 367799999999999999999999999987 88999974311 1111111110 24688899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~ 182 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. .+..+|
T Consensus 73 ~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~i 146 (260)
T 2zat_A 73 GKAE------DRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSV 146 (260)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEE
Confidence 9876 4555544 79999999996421 2335678899999998888887532 266899
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGV 256 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~ 256 (303)
|++||..+.. +......|..+|...+.+.+.+...+ . ++++||++.+.+....+........
T Consensus 147 v~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~ 214 (260)
T 2zat_A 147 LIVSSVGAYH------------PFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEY 214 (260)
T ss_dssp EEECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHH
T ss_pred EEEechhhcC------------CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHH
Confidence 9999996653 22345667788888888887665432 2 7888998765543221100000000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+........+++++|+|++++.++..+.
T Consensus 215 ----~~~~~~~~~~~~~~dva~~v~~l~s~~~ 242 (260)
T 2zat_A 215 ----MKESLRIRRLGNPEDCAGIVSFLCSEDA 242 (260)
T ss_dssp ----HHHHHTCSSCBCGGGGHHHHHHHTSGGG
T ss_pred ----HHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence 0000112347899999999999987654
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=6.2e-19 Score=152.87 Aligned_cols=211 Identities=17% Similarity=0.160 Sum_probs=138.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|++ |++++|+.... .+..+++... ...++.++.+|++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~--~~~~~~l~~~------------~~~~~~~~~~D~~ 67 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAH---IVLVARQVDRL--HEAARSLKEK------------FGVRVLEVAVDVA 67 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHH------------HCCCEEEEECCTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCHHHH--HHHHHHHHHh------------cCCceEEEEcCCC
Confidence 56789999999999999999999999987 88999974211 1111111110 0146889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
|.+ ++..+++ ++|+||||||.... ...+...+++|+.++.++++++.+. .+..+||+
T Consensus 68 ~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~ 141 (263)
T 3ai3_A 68 TPE------GVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIH 141 (263)
T ss_dssp SHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 976 5665554 79999999997532 2345678899999999988887542 25689999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHH------
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGI------ 252 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~------ 252 (303)
+||..+... ......|..+|...+.+.+.+... .. ++++||++.+..... .....
T Consensus 142 isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~ 208 (263)
T 3ai3_A 142 NASICAVQP------------LWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIK-TAKELTKDNGG 208 (263)
T ss_dssp ECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH-HHHHHTTTTTC
T ss_pred ECchhhcCC------------CCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhh-hhHhhhcccCC
Confidence 999966532 223456778888888887766543 22 788898664432111 11100
Q ss_pred -HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 -ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 -~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.......+.........+++++|+|++++.++..+.
T Consensus 209 ~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~ 245 (263)
T 3ai3_A 209 DWKGYLQSVADEHAPIKRFASPEELANFFVFLCSERA 245 (263)
T ss_dssp CHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHTSTTC
T ss_pred cHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccc
Confidence 000000000000112357899999999999987543
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.2e-19 Score=156.53 Aligned_cols=215 Identities=11% Similarity=0.066 Sum_probs=142.7
Q ss_pred CCCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCc
Q psy17679 33 EIGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSK 112 (303)
Q Consensus 33 ~~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 112 (303)
.|...+.-.+++|++|||||+|+||+++++.|++.|+. |++++|+... ..+..+++.. ...+
T Consensus 15 ~m~~~~~~~l~gk~~lVTGas~gIG~aia~~la~~G~~---V~~~~r~~~~--~~~~~~~l~~-------------~~~~ 76 (271)
T 4ibo_A 15 SMSNQIIFDLGGRTALVTGSSRGLGRAMAEGLAVAGAR---ILINGTDPSR--VAQTVQEFRN-------------VGHD 76 (271)
T ss_dssp ---CCGGGCCTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEECCSCHHH--HHHHHHHHHH-------------TTCC
T ss_pred cCccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH--HHHHHHHHHh-------------cCCc
Confidence 34444334578899999999999999999999999987 8888886431 1111122211 1257
Q ss_pred eEEEEecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc--
Q psy17679 113 VSAVAGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-- 176 (303)
Q Consensus 113 v~~~~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-- 176 (303)
+.++.+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+.
T Consensus 77 ~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 150 (271)
T 4ibo_A 77 AEAVAFDVTSES------EIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMI 150 (271)
T ss_dssp EEECCCCTTCHH------HHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 889999999976 5665554 78999999997532 2345778999999999998777553
Q ss_pred -CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH
Q psy17679 177 -KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML 249 (303)
Q Consensus 177 -~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~ 249 (303)
++..+||++||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+........
T Consensus 151 ~~~~g~iV~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~ 218 (271)
T 4ibo_A 151 PRGYGKIVNIGSLTSEL------------ARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALID 218 (271)
T ss_dssp HHTCEEEEEECCGGGTS------------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHH
T ss_pred hcCCcEEEEEccHHhCC------------CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhccc
Confidence 2557999999986542 22345667788887888777665432 2 788899776554322110
Q ss_pred -HHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 250 -VGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 250 -~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.......... .....+..++|+|+++++++....
T Consensus 219 ~~~~~~~~~~~-----~p~~r~~~pedva~~v~~L~s~~~ 253 (271)
T 4ibo_A 219 NPEFDAWVKAR-----TPAKRWGKPQELVGTAVFLSASAS 253 (271)
T ss_dssp CHHHHHHHHHH-----STTCSCBCGGGGHHHHHHHHSGGG
T ss_pred CHHHHHHHHhc-----CCCCCCcCHHHHHHHHHHHhCccc
Confidence 0000000001 112346789999999999887654
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=6.1e-20 Score=165.98 Aligned_cols=196 Identities=14% Similarity=0.114 Sum_probs=135.0
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec-CC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD-CS 121 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D-l~ 121 (303)
.+|+|+|||||||+|+++++.|++.|++ |++++|+++.... +. +.. ..+++++.+| ++
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~-~~---l~~--------------~~~v~~v~~D~l~ 62 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHH---VRAQVHSLKGLIA-EE---LQA--------------IPNVTLFQGPLLN 62 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCC---EEEEESCSCSHHH-HH---HHT--------------STTEEEEESCCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCE---EEEEECCCChhhH-HH---Hhh--------------cCCcEEEECCccC
Confidence 3578999999999999999999999988 9999998654211 11 110 1478899999 99
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCC-CceEEEEeCCcccCCCCccccC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKD-LKAFVHVSTAFTHCPRERIDEE 200 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~-~~r~i~iSS~~~~~~~~~~~E~ 200 (303)
|.+ ++..+++++|+|||+++... .+.|..+ .++++++.+. + ++||||+||.+... +.+
T Consensus 63 d~~------~l~~~~~~~d~Vi~~a~~~~--------~~~~~~~-~~l~~aa~~~-g~v~~~V~~SS~~~~~----~~~- 121 (352)
T 1xgk_A 63 NVP------LMDTLFEGAHLAFINTTSQA--------GDEIAIG-KDLADAAKRA-GTIQHYIYSSMPDHSL----YGP- 121 (352)
T ss_dssp CHH------HHHHHHTTCSEEEECCCSTT--------SCHHHHH-HHHHHHHHHH-SCCSEEEEEECCCGGG----TSS-
T ss_pred CHH------HHHHHHhcCCEEEEcCCCCC--------cHHHHHH-HHHHHHHHHc-CCccEEEEeCCccccc----cCC-
Confidence 876 78899999999999987532 1336666 8999999998 7 89999999986211 100
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChH--HHHHH--HHhhhh-hhccCCCCccccceeh-h
Q psy17679 201 FYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPI--GMLVG--IATGVL-HTHLINLNTVTDMVPV-D 274 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~--~~~~~--~~~~~~-~~~~~~~~~~~~~i~v-~ 274 (303)
.+.. .|..+|..+|++++... ...++++||++..-.... .++.. ...+.. ..+++.++..++++|+ +
T Consensus 122 ---~~~~---~y~~sK~~~E~~~~~~g-i~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~ 194 (352)
T 1xgk_A 122 ---WPAV---PMWAPKFTVENYVRQLG-LPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEH 194 (352)
T ss_dssp ---CCCC---TTTHHHHHHHHHHHTSS-SCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHH
T ss_pred ---CCCc---cHHHHHHHHHHHHHHcC-CCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHH
Confidence 1122 34477888999998752 122788887543211100 00000 011221 1235557788999999 9
Q ss_pred HHHHHHHHHHhhc
Q psy17679 275 LVVNSMISIAWSI 287 (303)
Q Consensus 275 D~a~ai~~~~~~~ 287 (303)
|+|++++.++.++
T Consensus 195 Dva~ai~~~l~~~ 207 (352)
T 1xgk_A 195 DVGPALLQIFKDG 207 (352)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCC
Confidence 9999999999875
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=158.50 Aligned_cols=205 Identities=13% Similarity=0.124 Sum_probs=139.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|++.|+. |++++|+.. .++++... ...++.++.+|++
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dv~ 83 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGAY---VVVADVNED------AAVRVANE------------IGSKAFGVRVDVS 83 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSHH------HHHHHHHH------------HCTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH------------hCCceEEEEecCC
Confidence 56799999999999999999999999987 888998642 22222111 0257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ++..+||+
T Consensus 84 d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~ 157 (277)
T 4dqx_A 84 SAK------DAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIIN 157 (277)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 976 5555554 78999999997532 2345778899999999988888543 24569999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+....... . ......
T Consensus 158 isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~--~~~~~~ 222 (277)
T 4dqx_A 158 TTSYTATS------------AIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIF-A--EAKDPA 222 (277)
T ss_dssp ECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHH-H--TCSCHH
T ss_pred ECchhhCc------------CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhc-c--cccchh
Confidence 99996643 23345678888888888877665443 2 78889876443211000 0 000000
Q ss_pred hc---cCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 TH---LINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~---~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. +........+.+++|+|+++++++....
T Consensus 223 ~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~ 255 (277)
T 4dqx_A 223 KLRSDFNARAVMDRMGTAEEIAEAMLFLASDRS 255 (277)
T ss_dssp HHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHhcCcccCCcCHHHHHHHHHHHhCCcc
Confidence 00 1112223457899999999999997654
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-19 Score=156.26 Aligned_cols=204 Identities=14% Similarity=0.138 Sum_probs=126.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+||||+|+||+++++.|++.|+. |++++|+.... .+..+++.. ...++.++.+|++
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~-------------~~~~~~~~~~D~~ 73 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAV---IHTCARNEYEL--NECLSKWQK-------------KGFQVTGSVCDAS 73 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHH-------------TTCCEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHh-------------cCCeeEEEECCCC
Confidence 56789999999999999999999999987 88999964211 111111111 0247889999999
Q ss_pred CCCCCCCHHHHHHHh--------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceE
Q psy17679 122 LPGLGLSETDRATLV--------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAF 182 (303)
Q Consensus 122 d~~~~~~~~~~~~~~--------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~ 182 (303)
+.+ ++..++ .++|+|||+||.... ...+...+++|+.++.++++++. +. +.++|
T Consensus 74 ~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~i 146 (266)
T 1xq1_A 74 LRP------EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNI 146 (266)
T ss_dssp SHH------HHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEE
Confidence 876 455554 578999999997532 23456788999999999998884 34 67899
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGV 256 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~ 256 (303)
|++||..+... ......|..+|...+.+.+.+...+ . ++++||++.+.............
T Consensus 147 v~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-- 212 (266)
T 1xq1_A 147 IFMSSIAGVVS------------ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKK-- 212 (266)
T ss_dssp EEEC----------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------
T ss_pred EEEccchhccC------------CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHH--
Confidence 99999865431 1234467778888888777665432 2 78889876443321111000000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
... .......+++++|+|++++.++..+
T Consensus 213 --~~~-~~~~~~~~~~~~dva~~~~~l~~~~ 240 (266)
T 1xq1_A 213 --VVI-SRKPLGRFGEPEEVSSLVAFLCMPA 240 (266)
T ss_dssp --------------CCGGGGHHHHHHHTSGG
T ss_pred --HHH-hcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 000 0111124789999999999988754
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=156.58 Aligned_cols=209 Identities=11% Similarity=0.054 Sum_probs=135.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccC---cCcCCceEEEE
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEV---PDFRSKVSAVA 117 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~---~~~~~~v~~~~ 117 (303)
.+++|+|+||||+|+||+++++.|+++|++ |++++|+.. .++++... +.... .....++.++.
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 69 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGAT---VAACDLDRA------AAQETVRL-----LGGPGSKEGPPRGNHAAFQ 69 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSHH------HHHHHHHT-----C------------CCEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCChH------HHHHHHHH-----HHhcCccccccCcceEEEE
Confidence 467789999999999999999999999987 889999743 12111110 00000 00014688999
Q ss_pred ecCCCCCCCCCHHHHHHHhcc-------c-cEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC-
Q psy17679 118 GDCSLPGLGLSETDRATLVKQ-------V-NIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD- 178 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~~~-------~-dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~- 178 (303)
+|++|.+ ++..++++ + |+|||+||.... ...+...+++|+.++.++++++.+. .+
T Consensus 70 ~D~~~~~------~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 143 (264)
T 2pd6_A 70 ADVSEAR------AARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGC 143 (264)
T ss_dssp CCTTSHH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred ecCCCHH------HHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCC
Confidence 9999876 56655553 4 999999997542 2345678899999999999888764 13
Q ss_pred CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHH
Q psy17679 179 LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGI 252 (303)
Q Consensus 179 ~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~ 252 (303)
..+||++||.++... ..+...|..+|...+.+.+.+... .. ++++||++.+..... .....
T Consensus 144 ~g~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~ 210 (264)
T 2pd6_A 144 RGSIINISSIVGKVG------------NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK-VPQKV 210 (264)
T ss_dssp CEEEEEECCTHHHHC------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---------
T ss_pred CceEEEECChhhccC------------CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh-cCHHH
Confidence 579999999965421 224567888888788777766443 22 788898765443211 11111
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
...... ......+++++|+|++++.++..+
T Consensus 211 ~~~~~~-----~~~~~~~~~~~dva~~~~~l~~~~ 240 (264)
T 2pd6_A 211 VDKITE-----MIPMGHLGDPEDVADVVAFLASED 240 (264)
T ss_dssp --CTGG-----GCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHH-----hCCCCCCCCHHHHHHHHHHHcCCc
Confidence 111000 011234789999999999998754
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-19 Score=156.09 Aligned_cols=203 Identities=13% Similarity=0.101 Sum_probs=138.5
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
...++|+||||||+|+||+++++.|++.|+. |++++|+.... ...+.++.+|
T Consensus 10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~~~-------------------------~~~~~~~~~D 61 (269)
T 3vtz_A 10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAK---VVSVSLDEKSD-------------------------VNVSDHFKID 61 (269)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCC--C-------------------------TTSSEEEECC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCchhc-------------------------cCceeEEEec
Confidence 4577899999999999999999999999987 88999975422 1366789999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceE
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAF 182 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~ 182 (303)
++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ++..+|
T Consensus 62 v~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i 135 (269)
T 3vtz_A 62 VTNEE------EVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSI 135 (269)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEE
Confidence 99976 5555554 78999999997542 2345678899999999998887652 256799
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecceecCccChHHHHHHHHh---
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGWIDNVYGPIGMLVGIAT--- 254 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~~~~~~g~~~~~~~~~~--- 254 (303)
|++||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+.............
T Consensus 136 v~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~ 203 (269)
T 3vtz_A 136 INIASVQSYA------------ATKNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDEN 203 (269)
T ss_dssp EEECCGGGTS------------BCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTT
T ss_pred EEECchhhcc------------CCCCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccch
Confidence 9999996653 22345678888888888877665433 2 77889876443321110000000
Q ss_pred --hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 --GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 --~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+........+.+++|+|+++++++....
T Consensus 204 ~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~ 239 (269)
T 3vtz_A 204 AVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRS 239 (269)
T ss_dssp HHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred hhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcc
Confidence 0000001111222357899999999999998654
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.6e-19 Score=154.41 Aligned_cols=210 Identities=11% Similarity=0.088 Sum_probs=138.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|+. |++++|++... .+..+++.. ...++.++.+|++
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~--~~~~~~l~~-------------~~~~~~~~~~Dv~ 81 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLR---VFVCARGEEGL--RTTLKELRE-------------AGVEADGRTCDVR 81 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHH-------------TTCCEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHh-------------cCCceEEEECCCC
Confidence 56789999999999999999999999987 88999974211 111111111 0246889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-----CCCceE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-----KDLKAF 182 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-----~~~~r~ 182 (303)
|.+ ++..+++ ++|+||||||.... ...+...+++|+.++.++++++.+. ++..+|
T Consensus 82 ~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~i 155 (277)
T 2rhc_B 82 SVP------EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRI 155 (277)
T ss_dssp CHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEE
Confidence 876 5555554 78999999997532 2345678899999999999887653 145799
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHh--
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIAT-- 254 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~-- 254 (303)
|++||..+.. +......|..+|...+.+.+.+... .. ++++||++.+..... .......
T Consensus 156 v~isS~~~~~------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~ 222 (277)
T 2rhc_B 156 VNIASTGGKQ------------GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS-VREHYSDIW 222 (277)
T ss_dssp EEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHH-HHHHHHHHH
T ss_pred EEECcccccc------------CCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhh-hhhhccccc
Confidence 9999996543 1223456778888788877765433 22 788898765433211 1100000
Q ss_pred ----hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 ----GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ----~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+........+++++|+|++++.++..+.
T Consensus 223 ~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~ 260 (277)
T 2rhc_B 223 EVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 260 (277)
T ss_dssp TCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred ccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 0000000001112358899999999999987653
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-19 Score=156.78 Aligned_cols=209 Identities=11% Similarity=0.086 Sum_probs=140.0
Q ss_pred cccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEE
Q psy17679 38 MQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVA 117 (303)
Q Consensus 38 ~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~ 117 (303)
|...+++|++|||||+|+||+++++.|++.|+. |++++|+... .+.+.+.+.. ...++.++.
T Consensus 22 m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~---~~~~~~~~~~------------~~~~~~~~~ 83 (270)
T 3ftp_A 22 MDKTLDKQVAIVTGASRGIGRAIALELARRGAM---VIGTATTEAG---AEGIGAAFKQ------------AGLEGRGAV 83 (270)
T ss_dssp -CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHHHHHHH------------HTCCCEEEE
T ss_pred cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh------------cCCcEEEEE
Confidence 445577899999999999999999999999997 8899996431 1111111110 025788999
Q ss_pred ecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCc
Q psy17679 118 GDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLK 180 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~ 180 (303)
+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. ++..
T Consensus 84 ~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g 157 (270)
T 3ftp_A 84 LNVNDAT------AVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGG 157 (270)
T ss_dssp CCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred EeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC
Confidence 9999976 5555554 78999999997542 2346778999999999999887642 2557
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHh
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIAT 254 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~ 254 (303)
+||++||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+...... .
T Consensus 158 ~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~------~ 219 (270)
T 3ftp_A 158 RIVNITSVVGSA------------GNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL------P 219 (270)
T ss_dssp EEEEECCHHHHH------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS------C
T ss_pred EEEEECchhhCC------------CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc------C
Confidence 899999996542 22245668888887777776654432 2 7888987644321110 0
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+........+.+++|+|+++++++....
T Consensus 220 ~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~ 253 (270)
T 3ftp_A 220 QEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQA 253 (270)
T ss_dssp HHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCc
Confidence 0000001111222357899999999999986543
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.81 E-value=6.4e-19 Score=153.22 Aligned_cols=203 Identities=10% Similarity=0.089 Sum_probs=134.4
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|++.|+. |++++|+.. .++++... ...++.++.+|+
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dv 82 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAI---VGLHGTRED------KLKEIAAD------------LGKDVFVFSANL 82 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH------------HCSSEEEEECCT
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH------------hCCceEEEEeec
Confidence 367899999999999999999999999987 888888632 22222111 125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+.+++.+. ++..+||
T Consensus 83 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv 156 (266)
T 3grp_A 83 SDRK------SIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRII 156 (266)
T ss_dssp TSHH------HHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9976 5555554 79999999997542 2346788999999977777666432 2567999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+..... ......
T Consensus 157 ~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~---- 219 (266)
T 3grp_A 157 NITSIVGVV------------GNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK-LNEKQK---- 219 (266)
T ss_dssp EECCC-------------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT-CCHHHH----
T ss_pred EECCHHHcC------------CCCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc-cCHHHH----
Confidence 999986542 22345678888887777776655433 2 788898764432110 000000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+........+.+.+|+|+++++++....
T Consensus 220 -~~~~~~~p~~r~~~~edvA~~v~~L~s~~~ 249 (266)
T 3grp_A 220 -EAIMAMIPMKRMGIGEEIAFATVYLASDEA 249 (266)
T ss_dssp -HHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred -HHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 001111222346789999999999987654
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-18 Score=151.11 Aligned_cols=220 Identities=12% Similarity=0.069 Sum_probs=143.9
Q ss_pred cccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc-------cHHHHHHHHHHhHHHhhhhccCcCcC
Q psy17679 38 MQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK-------DIQERLDAIFEDRLFWRLRAEVPDFR 110 (303)
Q Consensus 38 ~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~-------~~~~~l~~l~~~~~~~~~~~~~~~~~ 110 (303)
|...+++|++|||||+|+||+++++.|++.|+. |++++|..... ...+.+++.... +. ...
T Consensus 5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~ 72 (277)
T 3tsc_A 5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGAD---IIAVDIAGKLPSCVPYDPASPDDLSETVRL-----VE----AAN 72 (277)
T ss_dssp --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCCCTTCCSCCCCHHHHHHHHHH-----HH----HTT
T ss_pred cccccCCCEEEEECCccHHHHHHHHHHHHcCCE---EEEEeccccccccccccccCHHHHHHHHHH-----HH----hcC
Confidence 344577899999999999999999999999997 88888842200 011222222111 00 012
Q ss_pred CceEEEEecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc
Q psy17679 111 SKVSAVAGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM 176 (303)
Q Consensus 111 ~~v~~~~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~ 176 (303)
.++.++.+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+.
T Consensus 73 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 146 (277)
T 3tsc_A 73 RRIVAAVVDTRDFD------RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPR 146 (277)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 57889999999976 5555544 69999999998542 2345778999999999998886543
Q ss_pred ----CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH
Q psy17679 177 ----KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI 246 (303)
Q Consensus 177 ----~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~ 246 (303)
+...+||++||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+.....
T Consensus 147 ~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 214 (277)
T 3tsc_A 147 IIEGGRGGSIILISSAAGMK------------MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG 214 (277)
T ss_dssp HHHHTSCEEEEEECCGGGTS------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH
T ss_pred HHhcCCCCEEEEEccHhhCC------------CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc
Confidence 1246899999996653 22245568888888888777665443 2 788899886655433
Q ss_pred HHHHHHHh-----hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 247 GMLVGIAT-----GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 247 ~~~~~~~~-----~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........ ......+.. .....+.+.+|+|+++++++...+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~-~~p~r~~~pedvA~~v~~L~s~~~ 260 (277)
T 3tsc_A 215 DMVTAVGQAMETNPQLSHVLTP-FLPDWVAEPEDIADTVCWLASDES 260 (277)
T ss_dssp HHHHHHHHHHHTCGGGTTTTCC-SSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred hhhhhhhhcccccHHHHHHhhh-ccCCCCCCHHHHHHHHHHHhCccc
Confidence 22211111 111111111 111247899999999999998654
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.9e-19 Score=153.44 Aligned_cols=201 Identities=12% Similarity=0.065 Sum_probs=135.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|++ |++++|+.. .++++... ...++.++.+|++
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~ 61 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGAR---VVLADVLDE------EGAATARE------------LGDAARYQHLDVT 61 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHT------------TGGGEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH------------hCCceeEEEecCC
Confidence 56799999999999999999999999987 889999642 22222111 0146888999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHH----HhcCCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLA----REMKDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a----~~~~~~~r~i 183 (303)
+.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+.+.+ ++. +..+||
T Consensus 62 ~~~------~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv 134 (254)
T 1hdc_A 62 IEE------DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIV 134 (254)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEE
Confidence 876 5665554 79999999997532 2345678899999987655544 444 568999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+... ......|..+|...+.+.+.+...+ . ++++||++.+... ........
T Consensus 135 ~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-----~~~~~~~~ 197 (254)
T 1hdc_A 135 NISSAAGLMG------------LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT-----AETGIRQG 197 (254)
T ss_dssp EECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-----HHHTCCCS
T ss_pred EECchhhccC------------CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccc-----cccchhHH
Confidence 9999966532 2244567788888888777665432 2 7888987643321 11111100
Q ss_pred hhccCCCCccccce-ehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMV-PVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i-~v~D~a~ai~~~~~~~~ 288 (303)
.... .......+. +.+|+|++++.++..+.
T Consensus 198 ~~~~-~~~p~~~~~~~~~dvA~~v~~l~s~~~ 228 (254)
T 1hdc_A 198 EGNY-PNTPMGRVGNEPGEIAGAVVKLLSDTS 228 (254)
T ss_dssp TTSC-TTSTTSSCB-CHHHHHHHHHHHHSGGG
T ss_pred HHHH-hcCCCCCCCCCHHHHHHHHHHHhCchh
Confidence 1111 111112367 99999999999987653
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-19 Score=157.72 Aligned_cols=213 Identities=16% Similarity=0.134 Sum_probs=139.6
Q ss_pred cccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEE
Q psy17679 38 MQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVA 117 (303)
Q Consensus 38 ~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~ 117 (303)
|...+++|+++||||+|+||+++++.|+++|+. |++++|+.... .+..+++.. . .....++.++.
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~--~~~~~~l~~---------~-~~~~~~~~~~~ 69 (281)
T 3svt_A 5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAS---VMIVGRNPDKL--AGAVQELEA---------L-GANGGAIRYEP 69 (281)
T ss_dssp ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHT---------T-CCSSCEEEEEE
T ss_pred CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHH---------h-CCCCceEEEEe
Confidence 344567899999999999999999999999987 88899874321 111111111 0 00113788999
Q ss_pred ecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCC
Q psy17679 118 GDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDL 179 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~ 179 (303)
+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. ++.
T Consensus 70 ~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~ 143 (281)
T 3svt_A 70 TDITNED------ETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGG 143 (281)
T ss_dssp CCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 9999976 5555544 68999999997221 2345678999999999999888654 244
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH-HHH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML-VGI 252 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~-~~~ 252 (303)
.+||++||..+... ......|..+|...+.+.+.++..+ . +.++||++.+........ ...
T Consensus 144 g~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~ 211 (281)
T 3svt_A 144 GSFVGISSIAASNT------------HRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAEL 211 (281)
T ss_dssp EEEEEECCHHHHSC------------CTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHH
T ss_pred cEEEEEeCHHHcCC------------CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHH
Confidence 59999999965432 2234567788888888887665443 2 788899775544321100 000
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....... .....+.+++|+|++++.++....
T Consensus 212 ~~~~~~~-----~p~~r~~~~~dva~~~~~l~s~~~ 242 (281)
T 3svt_A 212 SSDYAMC-----TPLPRQGEVEDVANMAMFLLSDAA 242 (281)
T ss_dssp HHHHHHH-----CSSSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHhc-----CCCCCCCCHHHHHHHHHHHhCccc
Confidence 0000001 112346789999999999987654
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.1e-19 Score=153.89 Aligned_cols=197 Identities=11% Similarity=0.061 Sum_probs=136.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|+++|++ |++++|+.. .++++... + ..++.++.+|+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----~-------~~~~~~~~~D~ 62 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGAK---VVFGDILDE------EGKAMAAE-----L-------ADAARYVHLDV 62 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----T-------GGGEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-----h-------hcCceEEEecC
Confidence 367799999999999999999999999987 889999742 22221110 0 13578899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~ 182 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++.+. +. +..+|
T Consensus 63 ~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~i 135 (260)
T 1nff_A 63 TQPA------QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSI 135 (260)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEE
Confidence 9876 5666655 79999999997532 23456789999999976666554 34 56899
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGV 256 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~ 256 (303)
|++||..+... ......|..+|...+.+.+.+...+ . ++++||++.+.... . ...
T Consensus 136 v~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~-----~~~ 196 (260)
T 1nff_A 136 INISSIEGLAG------------TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--W-----VPE 196 (260)
T ss_dssp EEECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--T-----SCT
T ss_pred EEEeehhhcCC------------CCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--c-----chh
Confidence 99999966432 2234568888888888887665432 2 78889876544321 0 000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+. ......+++++|+|++++.++..+.
T Consensus 197 --~~~--~~~~~~~~~~~dvA~~v~~l~s~~~ 224 (260)
T 1nff_A 197 --DIF--QTALGRAAEPVEVSNLVVYLASDES 224 (260)
T ss_dssp --TCS--CCSSSSCBCHHHHHHHHHHHHSGGG
T ss_pred --hHH--hCccCCCCCHHHHHHHHHHHhCccc
Confidence 111 1112347899999999999987643
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=6.9e-19 Score=153.51 Aligned_cols=205 Identities=14% Similarity=0.154 Sum_probs=140.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+|+||||+|+||++++++|+++|++ |++++|+... .+++... +. ...++.++.+|+
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~---V~~~~r~~~~------~~~~~~~-----~~-----~~~~~~~~~~D~ 73 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGAK---VVIADIADDH------GQKVCNN-----IG-----SPDVISFVHCDV 73 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHHH------HHHHHHH-----HC-----CTTTEEEEECCT
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEcCChhH------HHHHHHH-----hC-----CCCceEEEECCC
Confidence 367799999999999999999999999987 8888886321 1111110 00 013788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc---------cccHHHHHhhhHHHHHHHHHHHHhc---CCCce
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF---------DEHIKMAVKINVCGVQAMLQLAREM---KDLKA 181 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~---------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r 181 (303)
+|.+ ++..+++ ++|+||||||.... ...+...+++|+.++.++++++.+. .+..+
T Consensus 74 ~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 147 (278)
T 2bgk_A 74 TKDE------DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGS 147 (278)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCe
Confidence 9876 5666654 79999999997532 1345678899999999999888763 25679
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChH------HHH
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPI------GML 249 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~------~~~ 249 (303)
||++||..+.... + .....|..+|...+.+.+.+... .. ++++||++.+..... ...
T Consensus 148 iv~isS~~~~~~~----------~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~ 216 (278)
T 2bgk_A 148 IVFTASISSFTAG----------E-GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRV 216 (278)
T ss_dssp EEEECCGGGTCCC----------T-TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHH
T ss_pred EEEEeeccccCCC----------C-CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHH
Confidence 9999999665321 1 13456888888888888776543 22 788899775443211 111
Q ss_pred HHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 250 VGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+... .+.....+++++|+|++++.++..+.
T Consensus 217 ~~~~~~-------~~~~~~~~~~~~dva~~~~~l~~~~~ 248 (278)
T 2bgk_A 217 EELAHQ-------AANLKGTLLRAEDVADAVAYLAGDES 248 (278)
T ss_dssp HHHHHH-------TCSSCSCCCCHHHHHHHHHHHHSGGG
T ss_pred HHhhhc-------ccccccccCCHHHHHHHHHHHcCccc
Confidence 111111 01123458999999999999987543
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.2e-19 Score=153.48 Aligned_cols=200 Identities=13% Similarity=0.067 Sum_probs=133.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|++.|+. |++++|+...... ..++ ...++.++.+|++
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~~~--~~~~----------------~~~~~~~~~~Dv~ 63 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGAT---VLGLDLKPPAGEE--PAAE----------------LGAAVRFRNADVT 63 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESSCC------------------------------CEEEECCTT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCChHHHHH--HHHH----------------hCCceEEEEccCC
Confidence 56799999999999999999999999987 8899998653221 1111 1247889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc-------
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM------- 176 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~------- 176 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+.
T Consensus 64 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~ 137 (257)
T 3tpc_A 64 NEA------DATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPD 137 (257)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCC
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccc
Confidence 976 5555554 79999999997532 2346778999999999999988764
Q ss_pred --CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHH
Q psy17679 177 --KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGM 248 (303)
Q Consensus 177 --~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~ 248 (303)
++..+||++||..+... ......|..+|...+.+.+.++.. .. +.+.||++.+..... .
T Consensus 138 ~~~~~g~iv~isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~ 204 (257)
T 3tpc_A 138 ADGERGVIVNTASIAAFDG------------QIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAG-M 204 (257)
T ss_dssp TTSCCEEEEEECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------
T ss_pred CCCCCeEEEEEechhhccC------------CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhcc-C
Confidence 13468999999965422 224556778887777777655443 22 788899775543211 1
Q ss_pred HHHHHhhhhhhccCCCCcc-ccceehhHHHHHHHHHHhh
Q psy17679 249 LVGIATGVLHTHLINLNTV-TDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~ai~~~~~~ 286 (303)
..... ..+...... ..+.+++|+|++++.++..
T Consensus 205 ~~~~~-----~~~~~~~p~~~r~~~~~dva~~v~~l~s~ 238 (257)
T 3tpc_A 205 PQDVQ-----DALAASVPFPPRLGRAEEYAALVKHICEN 238 (257)
T ss_dssp --------------CCSSSSCSCBCHHHHHHHHHHHHHC
T ss_pred CHHHH-----HHHHhcCCCCCCCCCHHHHHHHHHHHccc
Confidence 00000 111111111 3578999999999999975
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.6e-19 Score=154.35 Aligned_cols=201 Identities=12% Similarity=0.094 Sum_probs=135.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+||||||+|+||+++++.|++.|+. |++++|+.... .+..+++.. ...++.++.+|+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~-------------~~~~~~~~~~D~ 87 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGAR---VVLTARDVEKL--RAVEREIVA-------------AGGEAESHACDL 87 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHH-------------TTCEEEEEECCT
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEECCHHHH--HHHHHHHHH-------------hCCceeEEEecC
Confidence 367799999999999999999999999987 88999974321 111111111 125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~ 182 (303)
++.+ ++..+++ ++|+||||||.... ...+...+++|+.++..+++++... .+..+|
T Consensus 88 ~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i 161 (262)
T 3rkr_A 88 SHSD------AIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHI 161 (262)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceE
Confidence 9976 5555544 58999999997321 2345678899999999998887542 256799
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGV 256 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~ 256 (303)
|++||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+.+.... .
T Consensus 162 v~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~--- 221 (262)
T 3rkr_A 162 INISSLAGKN------------PVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL-----S--- 221 (262)
T ss_dssp EEECSSCSSC------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------
T ss_pred EEEechhhcC------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc-----c---
Confidence 9999996643 23345678888887777777655332 2 7888987754432110 0
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcccCC
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIGESG 291 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~ 291 (303)
.......++..+|+|++++.++..+...-
T Consensus 222 ------~~~~~~~~~~p~dvA~~v~~l~s~~~~~~ 250 (262)
T 3rkr_A 222 ------AKKSALGAIEPDDIADVVALLATQADQSF 250 (262)
T ss_dssp -------------CCCHHHHHHHHHHHHTCCTTCC
T ss_pred ------cccccccCCCHHHHHHHHHHHhcCccccc
Confidence 01122346799999999999998765543
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-19 Score=153.80 Aligned_cols=191 Identities=12% Similarity=0.050 Sum_probs=133.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+|+||||+|+||+++++.|+++|++ |++++|++. ..++.++.+|+++.
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~---V~~~~r~~~---------------------------~~~~~~~~~D~~~~ 51 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYR---VVVLDLRRE---------------------------GEDLIYVEGDVTRE 51 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE---EEEEESSCC---------------------------SSSSEEEECCTTCH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEccCcc---------------------------ccceEEEeCCCCCH
Confidence 578999999999999999999999987 889999754 14568999999987
Q ss_pred CCCCCHHHHHHHhc------cccEEEEcceecccc-------c----cHHHHHhhhHHHHHHHHHHHHhc-C--C-----
Q psy17679 124 GLGLSETDRATLVK------QVNIVFHGAATVRFD-------E----HIKMAVKINVCGVQAMLQLAREM-K--D----- 178 (303)
Q Consensus 124 ~~~~~~~~~~~~~~------~~dvVi~~a~~~~~~-------~----~~~~~~~~N~~~~~~ll~~a~~~-~--~----- 178 (303)
+ ++..+++ ++|++||+||..... . .+...+++|+.++.++++++.+. . +
T Consensus 52 ~------~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~ 125 (242)
T 1uay_A 52 E------DVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEG 125 (242)
T ss_dssp H------HHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTS
T ss_pred H------HHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Confidence 6 5666665 789999999975321 1 56788899999999999988764 1 1
Q ss_pred -CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHH
Q psy17679 179 -LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVG 251 (303)
Q Consensus 179 -~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~ 251 (303)
..+||++||..+... ......|..+|...+.+.+.+... .. ++++||++.+..... ....
T Consensus 126 ~~~~iv~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~ 192 (242)
T 1uay_A 126 QRGVIVNTASVAAFEG------------QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEK 192 (242)
T ss_dssp CSEEEEEECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-SCHH
T ss_pred CCeEEEEeCChhhccC------------CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc-cchh
Confidence 239999999965432 124556778887777777665433 22 788898664322110 0000
Q ss_pred HHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 252 IATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.........+ ....+++++|+|++++.++.++
T Consensus 193 ~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~ 224 (242)
T 1uay_A 193 AKASLAAQVP----FPPRLGRPEEYAALVLHILENP 224 (242)
T ss_dssp HHHHHHTTCC----SSCSCCCHHHHHHHHHHHHHCT
T ss_pred HHHHHHhhCC----CcccCCCHHHHHHHHHHHhcCC
Confidence 0000000001 1134789999999999999863
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-19 Score=156.75 Aligned_cols=212 Identities=11% Similarity=0.087 Sum_probs=139.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+||||+|+||+++++.|++.|++ |++++|... +.++++... +.. ...++.++.+|++
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~~---v~~~~r~~~-----~~~~~~~~~-----l~~----~~~~~~~~~~D~~ 81 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGAS---VVVNYGSSS-----KAAEEVVAE-----LKK----LGAQGVAIQADIS 81 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCH-----HHHHHHHHH-----HHH----TTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCch-----HHHHHHHHH-----HHh----cCCcEEEEEecCC
Confidence 56789999999999999999999999987 888888421 111111110 000 1257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEe
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVS 186 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iS 186 (303)
|.+ ++..+++ ++|+|||+||.... ...+...+++|+.++.++++++.+. ....+||++|
T Consensus 82 ~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~s 155 (274)
T 1ja9_A 82 KPS------EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS 155 (274)
T ss_dssp SHH------HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEc
Confidence 876 5666655 79999999997532 2234678899999999999988764 1116999999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHH-------H
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGI-------A 253 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~-------~ 253 (303)
|..+... +......|..+|...+.+.+.+...+ . ++++||++.+..... ..... .
T Consensus 156 S~~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~ 223 (274)
T 1ja9_A 156 SIAAVMT-----------GIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDE-NSWHYAPGGYKGM 223 (274)
T ss_dssp CGGGTCC-----------SCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHH-HGGGTSTTCCTTC
T ss_pred ChHhccC-----------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhc-ccccccccccccC
Confidence 9966411 11234568888888888887765432 2 788898764332110 00000 0
Q ss_pred h-hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 T-GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~-~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. +.....+..+.....+++++|+|++++.++..+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~~~ 259 (274)
T 1ja9_A 224 PQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEES 259 (274)
T ss_dssp CHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred chHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccc
Confidence 0 0000111112233568999999999999997653
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.5e-19 Score=152.32 Aligned_cols=205 Identities=11% Similarity=0.108 Sum_probs=137.1
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+++||||+|+||+++++.|++.|+. |++++|+.. .++++... +.. ....++.++.+|++|.
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----~~~---~~~~~~~~~~~D~~~~ 64 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDR---VAALDLSAE------TLEETART-----HWH---AYADKVLRVRADVADE 64 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----HST---TTGGGEEEEECCTTCH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-----HHH---hcCCcEEEEEecCCCH
Confidence 578999999999999999999999987 889999742 22221110 000 1124788999999997
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcceeccc----------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 124 GLGLSETDRATLVK-------QVNIVFHGAATVRF----------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~----------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+ ++..+++ ++|+||||||.... ...+...+++|+.++..+++.+.+. .+.++||
T Consensus 65 ~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv 138 (250)
T 2cfc_A 65 G------DVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIV 138 (250)
T ss_dssp H------HHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred H------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEE
Confidence 6 5666654 79999999997432 1235678899999998777666432 2668999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH-HHHHhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML-VGIATGV 256 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~-~~~~~~~ 256 (303)
++||..+... ......|..+|...+.+.+.+...+ . ++++||++.+........ ..... .
T Consensus 139 ~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~ 205 (250)
T 2cfc_A 139 NIASVASLVA------------FPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRD-Q 205 (250)
T ss_dssp EECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHH-H
T ss_pred EECChhhccC------------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHH-H
Confidence 9999966432 2245678888888888887765432 2 788898775544322110 00111 0
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. .......+++.+|+|++++.++..+.
T Consensus 206 ---~~-~~~~~~~~~~~~dva~~~~~l~~~~~ 233 (250)
T 2cfc_A 206 ---VL-ARIPQKEIGTAAQVADAVMFLAGEDA 233 (250)
T ss_dssp ---HH-TTCTTCSCBCHHHHHHHHHHHHSTTC
T ss_pred ---HH-hcCCCCCCcCHHHHHHHHHHHcCchh
Confidence 00 01112347899999999999987653
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=8.6e-19 Score=152.63 Aligned_cols=204 Identities=11% Similarity=0.088 Sum_probs=139.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|++.|+. |++++|.... ..+.+.+.+.. ...++.++.+|+
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~---V~~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~D~ 87 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGAK---VAVNYASSAG--AADEVVAAIAA------------AGGEAFAVKADV 87 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHHHH------------TTCCEEEEECCT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCChH--HHHHHHHHHHh------------cCCcEEEEECCC
Confidence 367899999999999999999999999987 8888885321 11222111111 125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ++..+||
T Consensus 88 ~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv 161 (269)
T 4dmm_A 88 SQES------EVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRII 161 (269)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9976 5555554 78999999998642 2345778999999999998887542 2567999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+.. +......|..+|...+.+.+.+... .. +.+.||++.+..............
T Consensus 162 ~isS~~~~~------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~-- 227 (269)
T 4dmm_A 162 NIASVVGEM------------GNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEV-- 227 (269)
T ss_dssp EECCHHHHH------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHHGGG--
T ss_pred EECchhhcC------------CCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHHHhc--
Confidence 999995542 1223556778888777766655443 23 788899876655433221111111
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....+.+.+|+|++++.++.++.
T Consensus 228 -------~p~~r~~~~~dvA~~v~~l~s~~~ 251 (269)
T 4dmm_A 228 -------IPLGRYGEAAEVAGVVRFLAADPA 251 (269)
T ss_dssp -------CTTSSCBCHHHHHHHHHHHHHCGG
T ss_pred -------CCCCCCCCHHHHHHHHHHHhCCcc
Confidence 112346789999999999998753
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.81 E-value=5.2e-19 Score=153.57 Aligned_cols=199 Identities=12% Similarity=0.091 Sum_probs=137.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|+++|+. |++++|+... ..++.++.+|++
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~--------------------------~~~~~~~~~Dl~ 56 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSK---VIDLSIHDPG--------------------------EAKYDHIECDVT 56 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESSCCC--------------------------SCSSEEEECCTT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEecCccc--------------------------CCceEEEEecCC
Confidence 67799999999999999999999999987 8899997542 147889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
|.+ ++..+++ ++|+||||||.... ...+...+++|+.++..+++++.+. ++..+||+
T Consensus 57 ~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~ 130 (264)
T 2dtx_A 57 NPD------QVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVN 130 (264)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 876 5555554 69999999997532 2346788999999999988888653 25679999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecceecCccChHHHHHHHH--hh--
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGWIDNVYGPIGMLVGIA--TG-- 255 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~~~~~~g~~~~~~~~~--~~-- 255 (303)
+||..+... ......|..+|...+.+.+.+...+ . ++++||++.+.+... ...... ..
T Consensus 131 isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~ 197 (264)
T 2dtx_A 131 ISSVQASII------------TKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRK-AAELEVGSDPMR 197 (264)
T ss_dssp ECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHH-HHHHHHCSCHHH
T ss_pred ECCchhccC------------CCCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhh-hhhcccccCchh
Confidence 999966432 2345667788888888777654332 3 788899775433111 100000 00
Q ss_pred --hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 --VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 --~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....+........+++++|+|++++.++..+.
T Consensus 198 ~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~ 232 (264)
T 2dtx_A 198 IEKKISEWGHEHPMQRIGKPQEVASAVAFLASREA 232 (264)
T ss_dssp HHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 000000000112347899999999999987653
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.2e-19 Score=154.46 Aligned_cols=211 Identities=12% Similarity=0.126 Sum_probs=141.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+|+||||+|+||+++++.|++.|++ |++++|+.... .+.++++... ...++.++.+|+
T Consensus 11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~---V~~~~r~~~~~--~~~~~~l~~~------------~~~~~~~~~~Dl 73 (265)
T 1h5q_A 11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGAN---VAVIYRSAADA--VEVTEKVGKE------------FGVKTKAYQCDV 73 (265)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEE---EEEEESSCTTH--HHHHHHHHHH------------HTCCEEEEECCT
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCcchhh--HHHHHHHHHh------------cCCeeEEEEeeC
Confidence 367799999999999999999999999987 99999965432 1222222111 015788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~ 182 (303)
+|.+ ++..+++ .+|+|||+||.... ...+...+++|+.++.++++++.+. +...+|
T Consensus 74 ~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~i 147 (265)
T 1h5q_A 74 SNTD------IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSI 147 (265)
T ss_dssp TCHH------HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceE
Confidence 9876 4555544 58999999997532 2345678899999999999887653 124799
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH---HHHHHHH
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI---GMLVGIA 253 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~---~~~~~~~ 253 (303)
|++||..+...... . ..+..+...|..+|...+.+.+.+...+ . ++++||++.+..... .....+.
T Consensus 148 v~~sS~~~~~~~~~--~---~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~ 222 (265)
T 1h5q_A 148 VVTSSMSSQIINQS--S---LNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQA 222 (265)
T ss_dssp EEECCGGGTSCCEE--E---TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHH
T ss_pred EEeCCchhhccccc--c---ccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHH
Confidence 99999865432110 0 0122345678888888888887765432 2 788899775543221 1111111
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. .....+++++|+|++++.++..+.
T Consensus 223 ~~---------~~~~~~~~~~dva~~~~~l~~~~~ 248 (265)
T 1h5q_A 223 SN---------IPLNRFAQPEEMTGQAILLLSDHA 248 (265)
T ss_dssp HT---------CTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred hc---------CcccCCCCHHHHHHHHHhhccCch
Confidence 10 111247899999999999987653
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=5.8e-19 Score=150.66 Aligned_cols=194 Identities=14% Similarity=0.070 Sum_probs=134.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|.+|++|||||+|+||++++++|++.|+. |++++|+.. +++++... + ..++.++.+|++
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----~-------~~~~~~~~~D~~ 59 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQ---VSMMGRRYQ------RLQQQELL-----L-------GNAVIGIVADLA 59 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----H-------GGGEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-----h-------cCCceEEECCCC
Confidence 45689999999999999999999999987 889999742 22222111 0 136889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVHV 185 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~i 185 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ....+||++
T Consensus 60 ~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~i 133 (235)
T 3l6e_A 60 HHE------DVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANV 133 (235)
T ss_dssp SHH------HHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 976 5555544 68999999997532 2345778999999999998888653 122399999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLHT 259 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~ 259 (303)
||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+.+..... .
T Consensus 134 sS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~------~---- 191 (235)
T 3l6e_A 134 LSSAAQV------------GKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD------H---- 191 (235)
T ss_dssp CCEECCS------------SCSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------
T ss_pred eCHHhcC------------CCCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccC------C----
Confidence 9996543 23345678888888888887665433 2 67889987655421100 0
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.....++..+|+|++++.++.++..
T Consensus 192 -----~~~~~~~~pedvA~~v~~l~~~~~~ 216 (235)
T 3l6e_A 192 -----VDPSGFMTPEDAAAYMLDALEARSS 216 (235)
T ss_dssp ----------CBCHHHHHHHHHHHTCCCSS
T ss_pred -----CCCcCCCCHHHHHHHHHHHHhCCCC
Confidence 0112478999999999999986543
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=8.8e-19 Score=154.29 Aligned_cols=208 Identities=13% Similarity=0.053 Sum_probs=143.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|++.|+. |++++|+... ..+.+.+... ....++.++.+|+
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~--~~~~~~~~~~------------~~~~~~~~~~~Dv 106 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGAN---IAIAYLDEEG--DANETKQYVE------------KEGVKCVLLPGDL 106 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHHH------------TTTCCEEEEESCT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCchH--HHHHHHHHHH------------hcCCcEEEEECCC
Confidence 467899999999999999999999999987 8888987532 1122222211 1125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVH 184 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~ 184 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. .+..+||+
T Consensus 107 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~ 180 (291)
T 3ijr_A 107 SDEQ------HCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIIN 180 (291)
T ss_dssp TSHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEE
Confidence 9976 5555544 78999999997532 2345788999999999999999875 23458999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+... ......|..+|...+.+.+.+...+ . +.+.||++.+..... .......
T Consensus 181 isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-----~~~~~~~ 243 (291)
T 3ijr_A 181 TASIVAYEG------------NETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS-----SFDEKKV 243 (291)
T ss_dssp ECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH-----HSCHHHH
T ss_pred EechHhcCC------------CCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc-----cCCHHHH
Confidence 999955421 2234567788888888877665443 2 788898765443111 1111111
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+........+.+++|+|+++++++....
T Consensus 244 ~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~ 273 (291)
T 3ijr_A 244 SQFGSNVPMQRPGQPYELAPAYVYLASSDS 273 (291)
T ss_dssp HHTTTTSTTSSCBCGGGTHHHHHHHHSGGG
T ss_pred HHHHccCCCCCCcCHHHHHHHHHHHhCCcc
Confidence 112222334457899999999999987654
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.3e-18 Score=150.08 Aligned_cols=220 Identities=11% Similarity=0.014 Sum_probs=143.4
Q ss_pred cccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc----------cHHHHHHHHHHhHHHhhhhccCc
Q psy17679 38 MQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK----------DIQERLDAIFEDRLFWRLRAEVP 107 (303)
Q Consensus 38 ~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~----------~~~~~l~~l~~~~~~~~~~~~~~ 107 (303)
|...+++|+++||||+|+||+++++.|++.|+. |++++|+.... ...+.++++... +.
T Consensus 5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~---V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---- 72 (286)
T 3uve_A 5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGAD---IIAVDICKPIRAGVVDTAIPASTPEDLAETADL-----VK---- 72 (286)
T ss_dssp -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHH-----HH----
T ss_pred CCcccCCCEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeccccccccccccccccCCHHHHHHHHHH-----Hh----
Confidence 334567899999999999999999999999987 88888863210 012222222211 00
Q ss_pred CcCCceEEEEecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHH
Q psy17679 108 DFRSKVSAVAGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQL 172 (303)
Q Consensus 108 ~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~ 172 (303)
....++.++.+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.+++++
T Consensus 73 ~~~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 146 (286)
T 3uve_A 73 GHNRRIVTAEVDVRDYD------ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKA 146 (286)
T ss_dssp TTTCCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred hcCCceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHH
Confidence 11257899999999976 5555554 79999999997432 234567899999999999888
Q ss_pred HHhc----CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCc
Q psy17679 173 AREM----KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNV 242 (303)
Q Consensus 173 a~~~----~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~ 242 (303)
+.+. +...+||++||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+.
T Consensus 147 ~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~ 214 (286)
T 3uve_A 147 GVPHMIAGGRGGSIILTSSVGGLK------------AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTP 214 (286)
T ss_dssp HHHHHHHHTSCEEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSST
T ss_pred HHHHHHhCCCCcEEEEECchhhcc------------CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCC
Confidence 7653 1246899999996653 22345667888887777777665442 2 78889987654
Q ss_pred cChHHHHHHHHhh-----hh---hh--ccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 243 YGPIGMLVGIATG-----VL---HT--HLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 243 ~g~~~~~~~~~~~-----~~---~~--~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
............. .. .. -... .....+.+.+|+|+++++++...+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~r~~~p~dvA~~v~fL~s~~a 269 (286)
T 3uve_A 215 MLHNEGTFKMFRPDLENPGPDDMAPICQMFH-TLPIPWVEPIDISNAVLFFASDEA 269 (286)
T ss_dssp TTSSHHHHHHHCTTSSSCCHHHHHHHHHTTC-SSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred cccccchhhhccccccccchhhHHHHHHhhh-ccCCCcCCHHHHHHHHHHHcCccc
Confidence 4321111111110 00 00 0111 112567899999999999987654
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.81 E-value=8.1e-19 Score=151.06 Aligned_cols=200 Identities=12% Similarity=0.109 Sum_probs=131.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|++ |++++|+.... . .++.++.+|++
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~~~~-----------------------~--~~~~~~~~D~~ 56 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGAK---VTGFDQAFTQE-----------------------Q--YPFATEVMDVA 56 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCCCSS-----------------------C--CSSEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCchhhh-----------------------c--CCceEEEcCCC
Confidence 56789999999999999999999999987 88999975411 0 23778999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~i 183 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++. +. +..+||
T Consensus 57 d~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv 129 (250)
T 2fwm_X 57 DAA------QVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-RGGAIV 129 (250)
T ss_dssp CHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-CCCEEE
Confidence 876 5666554 78999999997532 23467889999999999988884 33 568999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhh-h
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATG-V 256 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~-~ 256 (303)
++||..+.. +......|..+|...+.+.+.+...+ . ++++||++.+.............. .
T Consensus 130 ~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 197 (250)
T 2fwm_X 130 TVASDAAHT------------PRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQR 197 (250)
T ss_dssp EECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------
T ss_pred EECchhhCC------------CCCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHH
Confidence 999997653 22345668888888888887665432 2 788899775433211100000000 0
Q ss_pred hhh---ccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHT---HLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~---~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
... .+........+.+.+|+|++++.++..+.
T Consensus 198 ~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~ 232 (250)
T 2fwm_X 198 IRGFGEQFKLGIPLGKIARPQEIANTILFLASDLA 232 (250)
T ss_dssp ------------------CHHHHHHHHHHHHSGGG
T ss_pred HhhhhhcccccCCCCCCcCHHHHHHHHHHHhCccc
Confidence 000 00000111237899999999999987653
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=4.8e-19 Score=152.22 Aligned_cols=201 Identities=10% Similarity=0.062 Sum_probs=135.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
..++|+||||||+|+||+++++.|++.|+. |++++|+.. .++++... ...++.++.+|+
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~ 69 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGSK---VIISGSNEE------KLKSLGNA------------LKDNYTIEVCNL 69 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH------------HCSSEEEEECCT
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEcCCHH------HHHHHHHH------------hccCccEEEcCC
Confidence 467899999999999999999999999987 889999642 22222111 015788999999
Q ss_pred CCCCCCCCHHHHHHHhc---cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeC
Q psy17679 121 SLPGLGLSETDRATLVK---QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVST 187 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~---~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS 187 (303)
++.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. .+..+||++||
T Consensus 70 ~~~~------~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS 143 (249)
T 3f9i_A 70 ANKE------ECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISS 143 (249)
T ss_dssp TSHH------HHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCHH------HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcc
Confidence 9876 5666665 78999999997542 3456789999999999998877542 25679999999
Q ss_pred CcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH---HHHHHHHhhhhh
Q psy17679 188 AFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI---GMLVGIATGVLH 258 (303)
Q Consensus 188 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~---~~~~~~~~~~~~ 258 (303)
..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+..... .....+..
T Consensus 144 ~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~---- 207 (249)
T 3f9i_A 144 IVGIA------------GNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQ---- 207 (249)
T ss_dssp CCC--------------CCSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHH----
T ss_pred HHhcc------------CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHh----
Confidence 96543 22345668888887777777654432 2 788898775443211 11111111
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
......+++++|+|++++.++..+..
T Consensus 208 -----~~~~~~~~~~~dva~~~~~l~s~~~~ 233 (249)
T 3f9i_A 208 -----KIPLGTYGIPEDVAYAVAFLASNNAS 233 (249)
T ss_dssp -----HCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred -----cCCCCCCcCHHHHHHHHHHHcCCccC
Confidence 11224578999999999999986643
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-19 Score=154.00 Aligned_cols=205 Identities=9% Similarity=0.045 Sum_probs=139.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|+. |++++|+... .+.+.+.+.. ...++.++.+|++
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~~---v~~~~r~~~~---~~~~~~~~~~------------~~~~~~~~~~D~~ 64 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGAT---VVGTATSQAS---AEKFENSMKE------------KGFKARGLVLNIS 64 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHHHHHHH------------TTCCEEEEECCTT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh------------cCCceEEEEecCC
Confidence 56789999999999999999999999987 8899996432 1122111110 1257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
|.+ ++..+++ ++|+||||||.... ...+...+++|+.++.++++.+.+. ++..+||+
T Consensus 65 ~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~ 138 (247)
T 3lyl_A 65 DIE------SIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIIS 138 (247)
T ss_dssp CHH------HHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 976 5555554 58999999998532 2345678899999999998887553 25579999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+... ......|..+|...+.+.+.+...+ . +.+.||++.+....... ....
T Consensus 139 isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~----- 200 (247)
T 3lyl_A 139 IGSVVGSAG------------NPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLT-DEQK----- 200 (247)
T ss_dssp ECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC-HHHH-----
T ss_pred EcchhhccC------------CCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhcc-HHHH-----
Confidence 999965432 2245667888887777776554432 2 78889977554422100 0000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+........+.+++|+|++++.++....
T Consensus 201 ~~~~~~~~~~~~~~~~dva~~i~~l~s~~~ 230 (247)
T 3lyl_A 201 SFIATKIPSGQIGEPKDIAAAVAFLASEEA 230 (247)
T ss_dssp HHHHTTSTTCCCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhhcCCCCCCcCHHHHHHHHHHHhCCCc
Confidence 001112223457899999999999987654
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.81 E-value=3.1e-19 Score=153.60 Aligned_cols=199 Identities=12% Similarity=0.098 Sum_probs=138.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|+. |++++|+... .+.+.+.+ ..+..++.+|++
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~---V~~~~r~~~~---~~~~~~~~---------------~~~~~~~~~Dv~ 65 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGAK---VIGTATSESG---AQAISDYL---------------GDNGKGMALNVT 65 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHHHHH---------------GGGEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHh---------------cccceEEEEeCC
Confidence 56799999999999999999999999997 8888986431 11111111 135778999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. ++..+||+
T Consensus 66 d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~ 139 (248)
T 3op4_A 66 NPE------SIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIIN 139 (248)
T ss_dssp CHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 976 5665554 79999999997542 2345778999999999999887652 25679999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH---HHHHHHHhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI---GMLVGIATG 255 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~---~~~~~~~~~ 255 (303)
+||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+..... ........
T Consensus 140 isS~~~~~------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~- 206 (248)
T 3op4_A 140 VGSVVGTM------------GNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLA- 206 (248)
T ss_dssp ECCHHHHH------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHH-
T ss_pred EcchhhcC------------CCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHh-
Confidence 99985542 22345667788887777776554432 2 788899876544211 11111111
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+.+++|+|+++++++....
T Consensus 207 --------~~p~~r~~~p~dva~~v~~L~s~~~ 231 (248)
T 3op4_A 207 --------QVPAGRLGDPREIASAVAFLASPEA 231 (248)
T ss_dssp --------TCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred --------cCCCCCCcCHHHHHHHHHHHcCCcc
Confidence 1112347899999999999887554
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-18 Score=152.62 Aligned_cols=227 Identities=11% Similarity=0.020 Sum_probs=146.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCccc------HHHHHHHHHHhHHHhhhhccCcCcCCceE
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKD------IQERLDAIFEDRLFWRLRAEVPDFRSKVS 114 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~------~~~~l~~l~~~~~~~~~~~~~~~~~~~v~ 114 (303)
.+++|++|||||+|+||+++++.|++.|+. |++++|+..... ..+.+++.... +. ....++.
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~ 74 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGAD---IILFDICHDIETNEYPLATSRDLEEAGLE-----VE----KTGRKAY 74 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSCCTTSCSCCCCHHHHHHHHHH-----HH----HTTSCEE
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCe---EEEEcccccccccccchhhhHHHHHHHHH-----HH----hcCCceE
Confidence 367899999999999999999999999987 888888732110 01222221111 00 0125889
Q ss_pred EEEecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-----cccHHHHHhhhHHHHHHHHHHHHhc-CCCce
Q psy17679 115 AVAGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-----DEHIKMAVKINVCGVQAMLQLAREM-KDLKA 181 (303)
Q Consensus 115 ~~~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-----~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r 181 (303)
++.+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. .+..+
T Consensus 75 ~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~ 148 (287)
T 3pxx_A 75 TAEVDVRDRA------AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGAS 148 (287)
T ss_dssp EEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCE
T ss_pred EEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcE
Confidence 9999999976 5555554 79999999998542 2456788999999999999999875 23468
Q ss_pred EEEEeCCcccCCC--CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHH
Q psy17679 182 FVHVSTAFTHCPR--ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIA 253 (303)
Q Consensus 182 ~i~iSS~~~~~~~--~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~ 253 (303)
||++||..+.... .+..+ ..+......|..+|...+.+.+.+...+ . +.+.||++.+............
T Consensus 149 iv~isS~~~~~~~~~~~~~~---~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~ 225 (287)
T 3pxx_A 149 IITTGSVAGLIAAAQPPGAG---GPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQF 225 (287)
T ss_dssp EEEECCHHHHHHHHCCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHH
T ss_pred EEEeccchhccccccccccc---ccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhh
Confidence 9999999543211 11111 1233456778889988888887665543 2 7888998765443211111111
Q ss_pred hh---------hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TG---------VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~---------~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. ..............+.+++|+|+++++++...+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a 269 (287)
T 3pxx_A 226 RPDLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDES 269 (287)
T ss_dssp CTTSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred ccccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhh
Confidence 00 000001111222568999999999999987654
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.81 E-value=8.7e-19 Score=152.84 Aligned_cols=208 Identities=16% Similarity=0.109 Sum_probs=135.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|++.|+. |++++|+.. .++++... ...++.++.+|+
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dv 83 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYG---VALAGRRLD------ALQETAAE------------IGDDALCVPTDV 83 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH------------HTSCCEEEECCT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH------------hCCCeEEEEecC
Confidence 356789999999999999999999999987 889998642 22222211 015788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CC--Cc
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KD--LK 180 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~--~~ 180 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. .+ ..
T Consensus 84 ~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g 157 (272)
T 4dyv_A 84 TDPD------SVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGG 157 (272)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCc
Confidence 9976 5665554 79999999997432 2345678999999988888877653 12 46
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHh
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIAT 254 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~ 254 (303)
+||++||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+..... ...
T Consensus 158 ~IV~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-----~~~ 220 (272)
T 4dyv_A 158 RIINNGSISATS------------PRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK-----MKA 220 (272)
T ss_dssp EEEEECCSSTTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------
T ss_pred EEEEECchhhcC------------CCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh-----hcc
Confidence 999999996653 23345678888888888877665443 2 678898775443211 111
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcccCCcch
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGESGKVE 294 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~~ 294 (303)
+..... .......++.++|+|+++++++..+......+
T Consensus 221 ~~~~~~--~~~~~~~~~~pedvA~~v~fL~s~~~~~~~~~ 258 (272)
T 4dyv_A 221 GVPQAD--LSIKVEPVMDVAHVASAVVYMASLPLDANVQF 258 (272)
T ss_dssp -----------------CHHHHHHHHHHHHHSCTTSCCCE
T ss_pred cchhhh--hcccccCCCCHHHHHHHHHHHhCCCCcCccce
Confidence 111000 01122347899999999999999876654443
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=7.2e-19 Score=151.31 Aligned_cols=204 Identities=14% Similarity=0.126 Sum_probs=134.1
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|+++|++ |++++|++.. .+++.+.. ...++.++.+|+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~-----~~~~~~~~------------~~~~~~~~~~Dv 63 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGAD---IAIADLVPAP-----EAEAAIRN------------LGRRVLTVKCDV 63 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCH-----HHHHHHHH------------TTCCEEEEECCT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEcCCchh-----HHHHHHHh------------cCCcEEEEEeec
Confidence 367799999999999999999999999987 8899997521 11111110 025788999999
Q ss_pred CCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceE
Q psy17679 121 SLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~ 182 (303)
+|.+ ++..++ .++|++|||||.... ...+...+++|+.++.++++++. +. +..+|
T Consensus 64 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~i 136 (249)
T 2ew8_A 64 SQPG------DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRI 136 (249)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEE
Confidence 9876 455553 379999999997532 23456788999999888877753 33 56899
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGV 256 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~ 256 (303)
|++||..+... ......|..+|...+.+.+.+...+ . ++++||++.+........... ...
T Consensus 137 v~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~ 203 (249)
T 2ew8_A 137 INLTSTTYWLK------------IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM-FDV 203 (249)
T ss_dssp EEECCGGGGSC------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-----------------
T ss_pred EEEcchhhccC------------CCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccch-hhH
Confidence 99999966532 2245667888888888887665432 2 788899775443210110000 000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
..... .....+.+++|+|+++++++..+
T Consensus 204 ~~~~~---~~~~~~~~p~dva~~~~~l~s~~ 231 (249)
T 2ew8_A 204 LPNML---QAIPRLQVPLDLTGAAAFLASDD 231 (249)
T ss_dssp --CTT---SSSCSCCCTHHHHHHHHHHTSGG
T ss_pred HHHhh---CccCCCCCHHHHHHHHHHHcCcc
Confidence 00000 11234789999999999998754
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-18 Score=152.59 Aligned_cols=220 Identities=13% Similarity=0.027 Sum_probs=144.0
Q ss_pred ccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc------cHHHHHHHHHHhHHHhhhhccCcCcC
Q psy17679 37 PMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK------DIQERLDAIFEDRLFWRLRAEVPDFR 110 (303)
Q Consensus 37 ~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~------~~~~~l~~l~~~~~~~~~~~~~~~~~ 110 (303)
.|...+++|++|||||+|+||+++++.|++.|+. |++++|++... ...+.+++.... +. ...
T Consensus 21 ~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~ 88 (299)
T 3t7c_A 21 SMAGKVEGKVAFITGAARGQGRSHAITLAREGAD---IIAIDVCKQLDGVKLPMSTPDDLAETVRQ-----VE----ALG 88 (299)
T ss_dssp -CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCCTTCCSCCCCHHHHHHHHHH-----HH----HTT
T ss_pred ccccccCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEecccccccccccccCHHHHHHHHHH-----HH----hcC
Confidence 3555678899999999999999999999999997 88888873210 001222222111 00 112
Q ss_pred CceEEEEecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHh
Q psy17679 111 SKVSAVAGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLARE 175 (303)
Q Consensus 111 ~~v~~~~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~ 175 (303)
.++.++.+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++..
T Consensus 89 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 162 (299)
T 3t7c_A 89 RRIIASQVDVRDFD------AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIP 162 (299)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 57899999999976 5555554 79999999997532 234578899999999999888754
Q ss_pred c----CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccCh
Q psy17679 176 M----KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGP 245 (303)
Q Consensus 176 ~----~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~ 245 (303)
. ++..+||++||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+....
T Consensus 163 ~~~~~~~~g~Iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 230 (299)
T 3t7c_A 163 HIMAGKRGGSIVFTSSIGGLR------------GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLL 230 (299)
T ss_dssp HHHHTTSCEEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTS
T ss_pred HHHhcCCCcEEEEECChhhcc------------CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCcccc
Confidence 3 2357999999996653 22345667888887887777665443 2 78889987654422
Q ss_pred HHHHHHHHhhh-----------hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 246 IGMLVGIATGV-----------LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 246 ~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........... ...... .....+...+|+|+++++++...+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~r~~~pedvA~~v~fL~s~~a 282 (299)
T 3t7c_A 231 NEPTYRMFRPDLENPTVEDFQVASRQMH--VLPIPYVEPADISNAILFLVSDDA 282 (299)
T ss_dssp SHHHHHHHCTTSSSCCHHHHHHHHHHHS--SSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred ccchhhhhhhhhccchhhHHHHHhhhhc--ccCcCCCCHHHHHHHHHHHhCccc
Confidence 11111111000 000000 111457899999999999997654
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=6.6e-19 Score=150.78 Aligned_cols=198 Identities=13% Similarity=0.117 Sum_probs=136.1
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCc----cEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHL----KHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v----~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+|+|+||||+|+||+++++.|++.|+.. ..|++++|+.. .++++... +. ....++.++.+|
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~------~~~~~~~~-----~~----~~~~~~~~~~~D 66 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAA------DLEKISLE-----CR----AEGALTDTITAD 66 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHH------HHHHHHHH-----HH----TTTCEEEEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHH------HHHHHHHH-----HH----ccCCeeeEEEec
Confidence 5789999999999999999999999810 02888998642 12221110 00 012578899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceE
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAF 182 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~ 182 (303)
+++.+ ++..+++ ++|+||||||.... ...+...+++|+.++.++++++.+. .+..+|
T Consensus 67 ~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i 140 (244)
T 2bd0_A 67 ISDMA------DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHI 140 (244)
T ss_dssp TTSHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCCHH------HHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEE
Confidence 99876 5555554 69999999997532 2345678899999999998887542 256899
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCc----CCc--EEeecceecCccChHHHHHHHHhhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTP----NRV--HISGTGWIDNVYGPIGMLVGIATGV 256 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~----~~~--~ii~pg~~~~~~g~~~~~~~~~~~~ 256 (303)
|++||..+.. +......|..+|...+.+.+.+.. ... ++++||++.+..... .
T Consensus 141 v~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------~ 199 (244)
T 2bd0_A 141 FFITSVAATK------------AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK---------V 199 (244)
T ss_dssp EEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC---------C
T ss_pred EEEecchhcC------------CCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhh---------c
Confidence 9999996653 223456688888888887765532 223 788898764433110 0
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.. .. ...+++++|+|++++.++..+..
T Consensus 200 ----~~-~~-~~~~~~~~dva~~~~~l~~~~~~ 226 (244)
T 2bd0_A 200 ----DD-EM-QALMMMPEDIAAPVVQAYLQPSR 226 (244)
T ss_dssp ----CS-TT-GGGSBCHHHHHHHHHHHHTSCTT
T ss_pred ----cc-cc-cccCCCHHHHHHHHHHHHhCCcc
Confidence 00 01 23689999999999999986543
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-18 Score=151.22 Aligned_cols=203 Identities=10% Similarity=0.109 Sum_probs=138.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+||||+|+||+++++.|+++|++ |++++|+..... .+.+.... ...++.++.+|++
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~---V~~~~r~~~~~~---~~~~~~~~------------~~~~~~~~~~Dl~ 93 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGAD---VAIWYNSHPADE---KAEHLQKT------------YGVHSKAYKCNIS 93 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCE---EEEEESSSCCHH---HHHHHHHH------------HCSCEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHHH---HHHHHHHh------------cCCcceEEEeecC
Confidence 67799999999999999999999999987 889999765321 22111110 0157889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc------c---ccHHHHHhhhHHHH----HHHHHHHHhcCCCce
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF------D---EHIKMAVKINVCGV----QAMLQLAREMKDLKA 181 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~------~---~~~~~~~~~N~~~~----~~ll~~a~~~~~~~r 181 (303)
+.+ ++..+++ ++|+|||+||.... . ..+...+++|+.++ +.+++.+.+. +.++
T Consensus 94 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~ 166 (279)
T 3ctm_A 94 DPK------SVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-GKGS 166 (279)
T ss_dssp CHH------HHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCe
Confidence 876 5655554 49999999997532 1 23456888999995 5556666665 6789
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC-----cEEeecceecCccCh---HHHHHHHH
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR-----VHISGTGWIDNVYGP---IGMLVGIA 253 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~-----~~ii~pg~~~~~~g~---~~~~~~~~ 253 (303)
||++||..+... .+..+...|..+|...+.+.+.+...+ .++++||++.+.... ......+.
T Consensus 167 iv~isS~~~~~~----------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~v~~v~Pg~v~t~~~~~~~~~~~~~~~ 236 (279)
T 3ctm_A 167 LIITSSISGKIV----------NIPQLQAPYNTAKAACTHLAKSLAIEWAPFARVNTISPGYIDTDITDFASKDMKAKWW 236 (279)
T ss_dssp EEEECCCTTSCC-------------CCHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECSBSSTTTSSCCHHHHHHHH
T ss_pred EEEECchHhccC----------CCCCCcccHHHHHHHHHHHHHHHHHHhcccCCEEEEeccCCccccccccChHHHHHHH
Confidence 999999965432 012356678888888888887665432 278889987544321 11111111
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. ..+ ...+++++|+|++++.++..+.
T Consensus 237 ~----~~p-----~~~~~~~~dvA~~~~~l~s~~~ 262 (279)
T 3ctm_A 237 Q----LTP-----LGREGLTQELVGGYLYLASNAS 262 (279)
T ss_dssp H----HST-----TCSCBCGGGTHHHHHHHHSGGG
T ss_pred H----hCC-----ccCCcCHHHHHHHHHHHhCccc
Confidence 1 111 1247899999999999987653
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-18 Score=151.48 Aligned_cols=210 Identities=11% Similarity=0.112 Sum_probs=139.9
Q ss_pred ccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 39 QEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 39 ~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
...+++|++|||||+|+||+++++.|++.|+. |++++|+.... .+..+++... ...++.++.+
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~--~~~~~~l~~~------------~~~~~~~~~~ 78 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCS---VVVASRNLEEA--SEAAQKLTEK------------YGVETMAFRC 78 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHH------------HCCCEEEEEC
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHHh------------cCCeEEEEEc
Confidence 34577899999999999999999999999987 88999974211 1111111010 0146888999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCce
Q psy17679 119 DCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKA 181 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r 181 (303)
|+++.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. ++..+
T Consensus 79 Dl~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~ 152 (267)
T 1vl8_A 79 DVSNYE------EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPS 152 (267)
T ss_dssp CTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCE
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcE
Confidence 999876 5555554 78999999997532 2345678899999999998877542 25679
Q ss_pred EEEEeCCc-ccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH-HHHH
Q psy17679 182 FVHVSTAF-THCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML-VGIA 253 (303)
Q Consensus 182 ~i~iSS~~-~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~-~~~~ 253 (303)
||++||.. +.. +......|..+|...+.+.+.+...+ . ++++||++.+.+...... ....
T Consensus 153 iv~isS~~~~~~------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~ 220 (267)
T 1vl8_A 153 IINIGSLTVEEV------------TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKL 220 (267)
T ss_dssp EEEECCGGGTCC------------CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHH
T ss_pred EEEECCcchhcc------------CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHH
Confidence 99999986 432 22345668888888888877664432 2 788999876554322110 0111
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....... ....+++.+|+|++++.++....
T Consensus 221 ~~~~~~~-----p~~~~~~p~dvA~~v~~l~s~~~ 250 (267)
T 1vl8_A 221 DYMLKRI-----PLGRTGVPEDLKGVAVFLASEEA 250 (267)
T ss_dssp HHHHHTC-----TTSSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHHhhC-----CCCCCcCHHHHHHHHHHHcCccc
Confidence 1110011 11237899999999999987643
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=6.3e-19 Score=153.83 Aligned_cols=205 Identities=11% Similarity=0.087 Sum_probs=138.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|++.|+. |++++|... ..+..+++.. ...++.++.+|++
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~Dv~ 89 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAH---VLAWGRTDG---VKEVADEIAD-------------GGGSAEAVVADLA 89 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSTH---HHHHHHHHHT-------------TTCEEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEcCHHH---HHHHHHHHHh-------------cCCcEEEEEecCC
Confidence 56799999999999999999999999987 888887532 1111222211 1257889999999
Q ss_pred CCCCCCCHHHHHHHh------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEE
Q psy17679 122 LPGLGLSETDRATLV------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHV 185 (303)
Q Consensus 122 d~~~~~~~~~~~~~~------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~i 185 (303)
|.+ ++..+. .++|++|||||.... ...+...+++|+.++..+++++.+. ++..+||++
T Consensus 90 d~~------~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~i 163 (273)
T 3uf0_A 90 DLE------GAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTI 163 (273)
T ss_dssp CHH------HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHH------HHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 976 444433 279999999998542 2345678999999999998877432 256799999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHH-HHHHHhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGM-LVGIATGVLH 258 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~-~~~~~~~~~~ 258 (303)
||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+....... ..........
T Consensus 164 sS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 231 (273)
T 3uf0_A 164 ASMLSFQ------------GGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITA 231 (273)
T ss_dssp CCGGGTS------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHH
T ss_pred cchHhcC------------CCCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHh
Confidence 9996653 22345668888888888877665442 2 78889977554322110 0000011111
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. ....+..++|+|+++++++....
T Consensus 232 ~~-----p~~r~~~pedva~~v~~L~s~~a 256 (273)
T 3uf0_A 232 RI-----PAGRWATPEDMVGPAVFLASDAA 256 (273)
T ss_dssp HS-----TTSSCBCGGGGHHHHHHHHSGGG
T ss_pred cC-----CCCCCCCHHHHHHHHHHHhCchh
Confidence 11 12346889999999999988654
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-19 Score=153.57 Aligned_cols=202 Identities=14% Similarity=0.144 Sum_probs=132.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEE-EeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYL-LVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~-~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
+|+|+||||+|+||++++++|++.|+. |++ ..|++.. .+.+.+.+.. ...++.++.+|+++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~---v~~~~~r~~~~---~~~~~~~~~~------------~~~~~~~~~~D~~~ 62 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCK---VLVNYARSAKA---AEEVSKQIEA------------YGGQAITFGGDVSK 62 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHHH---HHHHHHHHHH------------HTCEEEEEECCTTS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHHH---HHHHHHHHHh------------cCCcEEEEeCCCCC
Confidence 478999999999999999999999987 777 4675321 1111111110 01478899999998
Q ss_pred CCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEE
Q psy17679 123 PGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHV 185 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~i 185 (303)
.+ ++..+++ ++|+|||+||.... ...+...+++|+.++.++++++.+. ++..+||++
T Consensus 63 ~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ 136 (244)
T 1edo_A 63 EA------DVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINI 136 (244)
T ss_dssp HH------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 76 5666654 68999999997542 2345678899999999998888653 256899999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVLHT 259 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~ 259 (303)
||..+... ......|..+|...+.+.+.+... .. ++++||++.+..... ........
T Consensus 137 sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~---- 199 (244)
T 1edo_A 137 ASVVGLIG------------NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKK---- 199 (244)
T ss_dssp CCTHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCHHHHHH----
T ss_pred CChhhcCC------------CCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh-cChHHHHH----
Confidence 99854321 123456777788777777665433 22 788898764332111 00000010
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
... ......+++++|+|++++.++.++
T Consensus 200 ~~~-~~~~~~~~~~~dva~~~~~l~~~~ 226 (244)
T 1edo_A 200 ILG-TIPLGRTGQPENVAGLVEFLALSP 226 (244)
T ss_dssp HHT-SCTTCSCBCHHHHHHHHHHHHHCS
T ss_pred Hhh-cCCCCCCCCHHHHHHHHHHHhCCC
Confidence 000 111234789999999999998544
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=9.1e-19 Score=151.60 Aligned_cols=212 Identities=13% Similarity=0.097 Sum_probs=135.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|+. |++++|+.... ..+..+++... ...++.++.+|++
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~-~~~~~~~~~~~------------~~~~~~~~~~D~~ 65 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGAD---IVLNGFGDAAE-IEKVRAGLAAQ------------HGVKVLYDGADLS 65 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEECCSCHHH-HHHHHHHHHHH------------HTSCEEEECCCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCE---EEEEeCCcchH-HHHHHHHHHhc------------cCCcEEEEECCCC
Confidence 46789999999999999999999999987 88888875320 11111111110 0146888999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. ++..+||+
T Consensus 66 ~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~ 139 (260)
T 1x1t_A 66 KGE------AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIIN 139 (260)
T ss_dssp SHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 976 5555554 79999999997532 2345778999999999988887542 25689999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHh----
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIAT---- 254 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~---- 254 (303)
+||..+... ......|..+|...+.+.+.+... .. +.++||++.+....... .....
T Consensus 140 isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~ 206 (260)
T 1x1t_A 140 IASAHGLVA------------SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQI-SALAEKNGV 206 (260)
T ss_dssp ECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------
T ss_pred ECcHHhCcC------------CCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhh-hhhccccCC
Confidence 999966432 223456778888788777765433 23 78889977554321110 00000
Q ss_pred ---hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 ---GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ---~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...............+++++|+|+++++++....
T Consensus 207 ~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~ 243 (260)
T 1x1t_A 207 DQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAA 243 (260)
T ss_dssp --------CHHHHCTTCCCBCHHHHHHHHHHHHSGGG
T ss_pred chHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhChhh
Confidence 0000000000112347899999999999987543
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=149.91 Aligned_cols=204 Identities=13% Similarity=0.113 Sum_probs=137.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|+++|+. |++++|+.. .++++... +.. ...++.++.+|+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----l~~----~~~~~~~~~~Dv 65 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAA---VAIAARRVE------KLRALGDE-----LTA----AGAKVHVLELDV 65 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----HHH----TTCCEEEEECCT
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-----HHh----cCCcEEEEECCC
Confidence 356799999999999999999999999987 889999642 22221110 000 024788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. ++ .+||
T Consensus 66 ~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv 138 (247)
T 2jah_A 66 ADRQ------GVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVV 138 (247)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEE
Confidence 9976 4555543 79999999997532 2345678899999999998887653 14 7999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChH---HHHHHHHh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPI---GMLVGIAT 254 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~---~~~~~~~~ 254 (303)
++||..+... ......|..+|...+.+.+.+... .. +.++||++.+.+... ........
T Consensus 139 ~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~ 206 (247)
T 2jah_A 139 QMSSIAGRVN------------VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYE 206 (247)
T ss_dssp EECCGGGTCC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHH
T ss_pred EEccHHhcCC------------CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHH
Confidence 9999966532 223456777787777776655432 22 788899876543211 01111111
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
..+ ....++..+|+|++++.++..+..
T Consensus 207 ----~~~----~~~~~~~pedvA~~v~~l~s~~~~ 233 (247)
T 2jah_A 207 ----QRI----SQIRKLQAQDIAEAVRYAVTAPHH 233 (247)
T ss_dssp ----HHT----TTSCCBCHHHHHHHHHHHHHSCTT
T ss_pred ----hcc----cccCCCCHHHHHHHHHHHhCCCcc
Confidence 111 111258999999999999986543
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.80 E-value=4e-19 Score=154.49 Aligned_cols=200 Identities=15% Similarity=0.111 Sum_probs=135.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|++.|+. |++++|+.... .....+.+|+
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~---V~~~~r~~~~~--------------------------~~~~~~~~Dv 75 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGAR---VAVADRAVAGI--------------------------AADLHLPGDL 75 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEECSSCCTTS--------------------------CCSEECCCCT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHH--------------------------HhhhccCcCC
Confidence 467899999999999999999999999987 88989875422 2224557898
Q ss_pred CCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceE
Q psy17679 121 SLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~ 182 (303)
++.+ .+..++ .++|++|||||.... ...+...+++|+.++..+++++. +. +..+|
T Consensus 76 ~~~~------~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~i 148 (266)
T 3uxy_A 76 REAA------YADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-GGGAI 148 (266)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEE
Confidence 8865 344443 379999999998642 23456788999999999998884 33 56799
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHh-h
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIAT-G 255 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~-~ 255 (303)
|++||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+............. .
T Consensus 149 v~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~ 216 (266)
T 3uxy_A 149 VNVASCWGLR------------PGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPD 216 (266)
T ss_dssp EEECCSBTTB------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHH
T ss_pred EEECCHHhCC------------CCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccch
Confidence 9999996653 23345678888888888887665443 2 78889876443211110000000 0
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....+........+.+++|+|+++++++....
T Consensus 217 ~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~ 249 (266)
T 3uxy_A 217 RAVAELGRTVPLGRIAEPEDIADVVLFLASDAA 249 (266)
T ss_dssp HHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 000111112223457899999999999998654
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3.5e-19 Score=153.92 Aligned_cols=202 Identities=16% Similarity=0.143 Sum_probs=139.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|+++|+. |++++|+.. .++++.... ..++.++.+|+
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~---V~~~~r~~~------~~~~~~~~~------------~~~~~~~~~Dv 63 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAE---VLLTGRNES------NIARIREEF------------GPRVHALRSDI 63 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHHH------------GGGEEEEECCT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHHh------------CCcceEEEccC
Confidence 367899999999999999999999999987 889999742 222222110 15788999999
Q ss_pred CCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEE
Q psy17679 121 SLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHV 185 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~i 185 (303)
+|.+ ++..++ .++|++|||||.... ...+...+++|+.++..+++++.+. ....+||++
T Consensus 64 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 64 ADLN------EIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp TCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 9976 455443 378999999998542 2345678999999999999999875 123589999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccCh-----HHHHHHHHh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGP-----IGMLVGIAT 254 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~-----~~~~~~~~~ 254 (303)
||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+.... .........
T Consensus 138 sS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 205 (255)
T 4eso_A 138 SSVADEG------------GHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKT 205 (255)
T ss_dssp CCGGGSS------------BCTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHH
T ss_pred CChhhcC------------CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHH
Confidence 9996643 22345678888888888877665443 2 78889987554321 111111111
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
..... .....+.+++|+|+++++++..
T Consensus 206 ~~~~~-----~p~~r~~~pedvA~~v~~L~s~ 232 (255)
T 4eso_A 206 LGDNI-----TPMKRNGTADEVARAVLFLAFE 232 (255)
T ss_dssp HHHHH-----STTSSCBCHHHHHHHHHHHHHT
T ss_pred HHhcc-----CCCCCCcCHHHHHHHHHHHcCc
Confidence 10001 1122467899999999998875
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-18 Score=151.88 Aligned_cols=205 Identities=14% Similarity=0.067 Sum_probs=141.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|++.|+. |++++|+..... +..+++.. ...++.++.+|+
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~~~--~~~~~~~~-------------~~~~~~~~~~Dl 90 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQ---VAVAARHSDALQ--VVADEIAG-------------VGGKALPIRCDV 90 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESSGGGGH--HHHHHHHH-------------TTCCCEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHHHHH--HHHHHHHh-------------cCCeEEEEEcCC
Confidence 467899999999999999999999999987 889999754321 11122211 125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC-CceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD-LKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~-~~r~ 182 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ++ ..+|
T Consensus 91 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~i 164 (276)
T 3r1i_A 91 TQPD------QVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTI 164 (276)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEE
Confidence 9976 5666555 79999999998542 2345678899999999998887653 12 3689
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH--HHHHHHh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG--MLVGIAT 254 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~--~~~~~~~ 254 (303)
|++||..+.... +......|..+|...+.+.+.++..+ . +.+.||++.+...... ....+..
T Consensus 165 v~isS~~~~~~~----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~ 234 (276)
T 3r1i_A 165 ITTASMSGHIIN----------IPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEP 234 (276)
T ss_dssp EEECCGGGTSCC----------CSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGG
T ss_pred EEECchHhcccC----------CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHh
Confidence 999999664321 11234567788888888777665442 2 7888998765443211 1111110
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+...+|+|+++++++...+
T Consensus 235 ---------~~p~~r~~~pedvA~~v~fL~s~~~ 259 (276)
T 3r1i_A 235 ---------KIPLGRMGRPEELTGLYLYLASAAS 259 (276)
T ss_dssp ---------GSTTSSCBCGGGSHHHHHHHHSGGG
T ss_pred ---------cCCCCCCcCHHHHHHHHHHHcCccc
Confidence 1112246789999999999988654
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=4.7e-19 Score=154.93 Aligned_cols=211 Identities=15% Similarity=0.170 Sum_probs=136.7
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
..+++|++|||||+|+||+++++.|++.|+. |++++|+... .+.+.+.+. .. ....++.++.+|
T Consensus 28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~--------~~--~~~~~~~~~~~D 91 (279)
T 1xg5_A 28 ERWRDRLALVTGASGGIGAAVARALVQQGLK---VVGCARTVGN---IEELAAECK--------SA--GYPGTLIPYRCD 91 (279)
T ss_dssp GGGTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHH--------HT--TCSSEEEEEECC
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEECChHH---HHHHHHHHH--------hc--CCCceEEEEEec
Confidence 3477899999999999999999999999987 8899996421 111111111 00 011467889999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHH----HHHHHHHHHhcCCC--
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCG----VQAMLQLAREMKDL-- 179 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~----~~~ll~~a~~~~~~-- 179 (303)
+++.+ ++..+++ ++|+|||+||.... ...+...+++|+.+ +..++..+.+. +.
T Consensus 92 l~~~~------~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~-~~~~ 164 (279)
T 1xg5_A 92 LSNEE------DILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER-NVDD 164 (279)
T ss_dssp TTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCS
T ss_pred CCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCC
Confidence 99876 5555554 79999999997532 23456788999999 55556666665 53
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCc------CCc--EEeecceecCccChHHHHHH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTP------NRV--HISGTGWIDNVYGPIGMLVG 251 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~------~~~--~ii~pg~~~~~~g~~~~~~~ 251 (303)
.+||++||..+... .|......|..+|...+.+.+.+.. ... ++++||++.+.+...
T Consensus 165 g~iv~isS~~~~~~----------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~----- 229 (279)
T 1xg5_A 165 GHIININSMSGHRV----------LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFK----- 229 (279)
T ss_dssp CEEEEECCGGGTSC----------CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHH-----
T ss_pred ceEEEEcChhhccc----------CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhh-----
Confidence 79999999966421 1333556788888887777765432 222 788899775443111
Q ss_pred HHhhhhhhccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 252 IATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
........... ......+++++|+|++++.++..+..
T Consensus 230 ~~~~~~~~~~~-~~~~~~~~~~~dvA~~i~~l~~~~~~ 266 (279)
T 1xg5_A 230 LHDKDPEKAAA-TYEQMKCLKPEDVAEAVIYVLSTPAH 266 (279)
T ss_dssp HTTTCHHHHHH-HHC---CBCHHHHHHHHHHHHHSCTT
T ss_pred hcccChhHHhh-hcccccCCCHHHHHHHHHHHhcCCcc
Confidence 00000000000 00112468999999999999987653
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=7.2e-19 Score=150.66 Aligned_cols=194 Identities=15% Similarity=0.172 Sum_probs=132.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcC--CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSC--PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g--~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
|++|+|+||||+|+||+++++.|++.| +. |++++|+..... .+.++ ...++.++.+|
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~---V~~~~r~~~~~~---~l~~~---------------~~~~~~~~~~D 59 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRH---IIATARDVEKAT---ELKSI---------------KDSRVHVLPLT 59 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCE---EEEEESSGGGCH---HHHTC---------------CCTTEEEEECC
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcE---EEEEecCHHHHH---HHHhc---------------cCCceEEEEee
Confidence 457899999999999999999999999 76 999999754321 11110 12578999999
Q ss_pred CCCCCCCCCHHHHHHHhc---------cccEEEEcceecc-c-------cccHHHHHhhhHHHHHHHHHHHHhc---C--
Q psy17679 120 CSLPGLGLSETDRATLVK---------QVNIVFHGAATVR-F-------DEHIKMAVKINVCGVQAMLQLAREM---K-- 177 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~---------~~dvVi~~a~~~~-~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~-- 177 (303)
+++.+ ++..+++ ++|+||||||... . ...+...+++|+.++..+++++.+. +
T Consensus 60 ~~~~~------~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~ 133 (250)
T 1yo6_A 60 VTCDK------SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAAS 133 (250)
T ss_dssp TTCHH------HHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHH
T ss_pred cCCHH------HHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhccc
Confidence 99876 5555555 7999999999754 1 2335678899999999988877643 1
Q ss_pred ----C-----CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCc
Q psy17679 178 ----D-----LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNV 242 (303)
Q Consensus 178 ----~-----~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~ 242 (303)
+ ..+||++||..+...... .. .+..+...|..+|...+.+.+.+...+ . ++++||++.+.
T Consensus 134 ~~~~~~~~~~~~~iv~isS~~~~~~~~~--~~---~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 208 (250)
T 1yo6_A 134 KESGDQLSVSRAAVITISSGLGSITDNT--SG---SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN 208 (250)
T ss_dssp SSCSSCCCTTTCEEEEECCGGGCSTTCC--ST---TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---
T ss_pred ccCCCcccCCCcEEEEeccCccccCCcc--cc---cccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecC
Confidence 2 679999999966432210 00 112345668888888888887665443 2 78889876443
Q ss_pred cChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 243 YGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 243 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.... ..+++.+|+|+.++.++..+.
T Consensus 209 ~~~~---------------------~~~~~~~~~a~~~~~~~~~~~ 233 (250)
T 1yo6_A 209 LGGK---------------------NAALTVEQSTAELISSFNKLD 233 (250)
T ss_dssp -------------------------------HHHHHHHHHHHTTCC
T ss_pred CCCC---------------------CCCCCHHHHHHHHHHHHhccc
Confidence 3110 135789999999999998664
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-18 Score=149.63 Aligned_cols=210 Identities=13% Similarity=0.076 Sum_probs=137.5
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+++||||+|+||+++++.|++.|+. |++++|+.......+..+++.. ...++.++.+|++|.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~~Dv~~~ 65 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFD---IAVADLPQQEEQAAETIKLIEA-------------ADQKAVFVGLDVTDK 65 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE---EEEEECGGGHHHHHHHHHHHHT-------------TTCCEEEEECCTTCH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCcchHHHHHHHHHHHh-------------cCCcEEEEEccCCCH
Confidence 578999999999999999999999987 8888987542101111111110 125788999999987
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCC-ceEEEE
Q psy17679 124 GLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDL-KAFVHV 185 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~-~r~i~i 185 (303)
+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ++. .+||++
T Consensus 66 ~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i 139 (258)
T 3a28_C 66 A------NFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINA 139 (258)
T ss_dssp H------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred H------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 6 5555554 79999999997532 2345678999999999998888653 245 799999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHH----h-
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIA----T- 254 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~----~- 254 (303)
||..+... ......|..+|...+.+.+.+...+ . ++++||++.+..... ...... .
T Consensus 140 sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~ 206 (258)
T 3a28_C 140 ASIAAIQG------------FPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ-IDAELSKINGKP 206 (258)
T ss_dssp CCGGGTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH-HHHHHHHHHCCC
T ss_pred CcchhccC------------CCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh-hhhhhccccCCc
Confidence 99966432 2245567888888888777664332 2 788899775433111 010000 0
Q ss_pred -hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 -GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 -~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+........+.+.+|+|+++++++..+.
T Consensus 207 ~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~ 241 (258)
T 3a28_C 207 IGENFKEYSSSIALGRPSVPEDVAGLVSFLASENS 241 (258)
T ss_dssp TTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred hHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccc
Confidence 0000001011111247899999999999987653
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-18 Score=150.29 Aligned_cols=205 Identities=15% Similarity=0.115 Sum_probs=137.8
Q ss_pred cCCcEEEEeCCc--chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGT--GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGat--G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+++|+++||||+ |+||+++++.|+++|++ |++++|+.. ..+.++++... .....++.+|
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~---V~~~~r~~~---~~~~~~~l~~~-------------~~~~~~~~~D 67 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAE---LAFTYQNDK---LKGRVEEFAAQ-------------LGSDIVLQCD 67 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCE---EEEEESSTT---THHHHHHHHHH-------------TTCCCEEECC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCE---EEEEcCcHH---HHHHHHHHHHh-------------cCCcEEEEcc
Confidence 567899999999 99999999999999987 889999762 12233333221 0234689999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc------------cccHHHHHhhhHHHHHHHHHHHHhc-CCC
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF------------DEHIKMAVKINVCGVQAMLQLAREM-KDL 179 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~------------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~ 179 (303)
++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. .+.
T Consensus 68 ~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 141 (265)
T 1qsg_A 68 VAEDA------SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG 141 (265)
T ss_dssp TTCHH------HHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC
Confidence 99976 5655554 68999999997531 1245678899999999999999875 112
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH-HHHHH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG-MLVGI 252 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~-~~~~~ 252 (303)
.+||++||..+.. +...+..|..+|...+.+.+.+...+ . ++++||++.+...... .....
T Consensus 142 g~iv~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~ 209 (265)
T 1qsg_A 142 SALLTLSYLGAER------------AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKM 209 (265)
T ss_dssp EEEEEEECGGGTS------------BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHH
T ss_pred CEEEEEcchhhcc------------CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHH
Confidence 5999999986542 12234567788888888877654432 2 7888998755432110 00111
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........+ ...+.+++|+|+++++++..+.
T Consensus 210 ~~~~~~~~p-----~~~~~~~~dva~~v~~l~s~~~ 240 (265)
T 1qsg_A 210 LAHCEAVTP-----IRRTVTIEDVGNSAAFLCSDLS 240 (265)
T ss_dssp HHHHHHHST-----TSSCCCHHHHHHHHHHHTSGGG
T ss_pred HHHHHhcCC-----CCCCCCHHHHHHHHHHHhCchh
Confidence 110000111 1236799999999999987543
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=5.7e-19 Score=153.13 Aligned_cols=205 Identities=13% Similarity=0.027 Sum_probs=139.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|+++|+. |++++|+.... .+..+++.. ....++.++.+|+
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~--~~~~~~l~~------------~~~~~~~~~~~Dv 69 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGAN---VAVAGRSTADI--DACVADLDQ------------LGSGKVIGVQTDV 69 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHT------------TSSSCEEEEECCT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHh------------hCCCcEEEEEcCC
Confidence 367899999999999999999999999987 88999974321 111111111 1114788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. ++..+||
T Consensus 70 ~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv 143 (262)
T 3pk0_A 70 SDRA------QCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVV 143 (262)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9976 5555554 79999999997532 2345678999999999988887654 2567999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccCh---HHHHHHHHh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGP---IGMLVGIAT 254 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~---~~~~~~~~~ 254 (303)
++||..+.. .+......|..+|...+.+.+.++..+ . +.++||++.+.... ......+..
T Consensus 144 ~isS~~~~~-----------~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~ 212 (262)
T 3pk0_A 144 LTSSITGPI-----------TGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMAR 212 (262)
T ss_dssp EECCSBTTT-----------BCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHT
T ss_pred EEechhhcc-----------CCCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHh
Confidence 999986531 122345678888888888887665442 2 78889876443210 011111111
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. .....+...+|+|+++++++....
T Consensus 213 ~---------~p~~r~~~p~dva~~v~~L~s~~~ 237 (262)
T 3pk0_A 213 S---------IPAGALGTPEDIGHLAAFLATKEA 237 (262)
T ss_dssp T---------STTSSCBCHHHHHHHHHHHHSGGG
T ss_pred c---------CCCCCCcCHHHHHHHHHHHhCccc
Confidence 1 111236789999999999987654
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.4e-18 Score=153.35 Aligned_cols=218 Identities=11% Similarity=0.049 Sum_probs=142.4
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc------cHHHHHHHHHHhHHHhhhhccCcCcCCceE
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK------DIQERLDAIFEDRLFWRLRAEVPDFRSKVS 114 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~------~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~ 114 (303)
.+++|++|||||+|+||+++++.|++.|+. |++++|+.... ...+.+++.... +. ....++.
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~---Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~ 110 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGAD---IVAIDLCRQQPNLDYAQGSPEELKETVRL-----VE----EQGRRII 110 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEECCCCCTTCCSCCCCHHHHHHHHHH-----HH----HTTCCEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCe---EEEEecccccccccccccCHHHHHHHHHH-----HH----hcCCeEE
Confidence 467899999999999999999999999997 88887763211 012222222111 00 1125788
Q ss_pred EEEecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----
Q psy17679 115 AVAGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---- 176 (303)
Q Consensus 115 ~~~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---- 176 (303)
++.+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+.
T Consensus 111 ~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 184 (317)
T 3oec_A 111 ARQADVRDLA------SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIER 184 (317)
T ss_dssp EEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999999976 5555554 78999999997542 2346778999999999998888543
Q ss_pred CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHH
Q psy17679 177 KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLV 250 (303)
Q Consensus 177 ~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~ 250 (303)
+...+||++||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+.........
T Consensus 185 ~~~g~Iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~ 252 (317)
T 3oec_A 185 GQGGSVIFVSSTVGLR------------GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLL 252 (317)
T ss_dssp CSCEEEEEECCGGGSS------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHH
T ss_pred CCCCEEEEECcHHhcC------------CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhh
Confidence 1246899999996653 22345678888888888877665443 2 7888987654332111111
Q ss_pred HHHhhh--------hhhcc-CCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 251 GIATGV--------LHTHL-INLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 251 ~~~~~~--------~~~~~-~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...... ....+ ........|++++|+|+++++++...+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a 299 (317)
T 3oec_A 253 KMFLPHLENPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEA 299 (317)
T ss_dssp HHHCTTCSSCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGG
T ss_pred hhhhhhccccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcc
Confidence 111000 00000 111222578999999999999987654
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=8.4e-19 Score=150.41 Aligned_cols=200 Identities=14% Similarity=0.083 Sum_probs=138.3
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHh-cCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLR-SCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~-~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
++|++|||||+|+||+++++.|++ .|+. |++..|+.... ...+.++.+|++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~---v~~~~~~~~~~-------------------------~~~~~~~~~Dv~ 54 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHT---VINIDIQQSFS-------------------------AENLKFIKADLT 54 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEE---EEEEESSCCCC-------------------------CTTEEEEECCTT
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcE---EEEeccccccc-------------------------cccceEEecCcC
Confidence 568999999999999999999999 6665 88888875411 157789999999
Q ss_pred CCCCCCCHHHHHHHhc-----cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeCC
Q psy17679 122 LPGLGLSETDRATLVK-----QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-----~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS~ 188 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ....+||++||.
T Consensus 55 ~~~------~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~ 128 (244)
T 4e4y_A 55 KQQ------DITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSD 128 (244)
T ss_dssp CHH------HHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCG
T ss_pred CHH------HHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCH
Confidence 976 5666655 78999999998532 2345778999999999999998875 112489999999
Q ss_pred cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHh--hh----
Q psy17679 189 FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIAT--GV---- 256 (303)
Q Consensus 189 ~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~--~~---- 256 (303)
.+.. +......|..+|...+.+.+.+...+ . +.+.||++.+...... ...... +.
T Consensus 129 ~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~ 195 (244)
T 4e4y_A 129 QCFI------------AKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNL-IQKYANNVGISFDE 195 (244)
T ss_dssp GGTC------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHH-HHHHHHHHTCCHHH
T ss_pred HHcc------------CCCCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHH-HHhhhhhcCCCHHH
Confidence 6653 22345678888888888887665432 2 7888987654332111 111000 00
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.............+.+++|+|+++++++..+..
T Consensus 196 ~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~ 228 (244)
T 4e4y_A 196 AQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSK 228 (244)
T ss_dssp HHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHhhcCCCCCCcCHHHHHHHHHHHhcCccc
Confidence 001111122234578999999999999986543
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=6.3e-19 Score=152.70 Aligned_cols=202 Identities=10% Similarity=0.073 Sum_probs=136.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+||||+|+||+++++.|+++|++ |++++|+..... +..+++ ..++.++.+|++
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~---V~~~~r~~~~~~--~~~~~~----------------~~~~~~~~~D~~ 68 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGAS---AVLLDLPNSGGE--AQAKKL----------------GNNCVFAPADVT 68 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECTTSSHH--HHHHHH----------------CTTEEEEECCTT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCcHhHH--HHHHHh----------------CCceEEEEcCCC
Confidence 56789999999999999999999999987 889999865321 111111 157889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------------cccHHHHHhhhHHHHHHHHHHHHhc---C-
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------------DEHIKMAVKINVCGVQAMLQLAREM---K- 177 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------------~~~~~~~~~~N~~~~~~ll~~a~~~---~- 177 (303)
|.+ ++..+++ ++|+||||||.... ...+...+++|+.++.++++++.+. +
T Consensus 69 ~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 142 (265)
T 2o23_A 69 SEK------DVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNE 142 (265)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSC
T ss_pred CHH------HHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc
Confidence 876 5666655 79999999997532 2235678899999999999888754 1
Q ss_pred -----CCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChH
Q psy17679 178 -----DLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPI 246 (303)
Q Consensus 178 -----~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~ 246 (303)
+..+||++||.++... ......|..+|...+.+.+.+... .. ++++||++.+.....
T Consensus 143 ~~~~~~~~~iv~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 210 (265)
T 2o23_A 143 PDQGGQRGVIINTASVAAFEG------------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS 210 (265)
T ss_dssp CCTTSCCEEEEEECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----
T ss_pred cccCCCCcEEEEeCChhhcCC------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc
Confidence 3578999999965432 223456778888777777655433 22 788899775443211
Q ss_pred HHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 247 GMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.............+ ....+++++|+|++++.++..+
T Consensus 211 -~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~ 246 (265)
T 2o23_A 211 -LPEKVCNFLASQVP----FPSRLGDPAEYAHLVQAIIENP 246 (265)
T ss_dssp -------CHHHHTCS----SSCSCBCHHHHHHHHHHHHHCT
T ss_pred -cCHHHHHHHHHcCC----CcCCCCCHHHHHHHHHHHhhcC
Confidence 00000000000111 1124789999999999998654
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=2.5e-18 Score=149.13 Aligned_cols=194 Identities=13% Similarity=0.174 Sum_probs=137.9
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcC---CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEE
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSC---PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAV 116 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g---~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~ 116 (303)
..+++|+|+||||+|+||+++++.|++.| +. |++++|+...... ++++... ..++.++
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~---V~~~~r~~~~~~~---~~~l~~~-------------~~~~~~~ 77 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQH---LFTTCRNREQAKE---LEDLAKN-------------HSNIHIL 77 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSE---EEEEESCTTSCHH---HHHHHHH-------------CTTEEEE
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcE---EEEEecChhhhHH---HHHhhcc-------------CCceEEE
Confidence 45778999999999999999999999998 65 9999998764432 2222211 2578999
Q ss_pred EecCCCCCCCCCHHHHHHHhc---------cccEEEEcceecc-c-------cccHHHHHhhhHHHHHHHHHHHHhc---
Q psy17679 117 AGDCSLPGLGLSETDRATLVK---------QVNIVFHGAATVR-F-------DEHIKMAVKINVCGVQAMLQLAREM--- 176 (303)
Q Consensus 117 ~~Dl~d~~~~~~~~~~~~~~~---------~~dvVi~~a~~~~-~-------~~~~~~~~~~N~~~~~~ll~~a~~~--- 176 (303)
.+|+++.+ ++..+++ ++|+||||||... . ...+...+++|+.++..+++++.+.
T Consensus 78 ~~Dl~~~~------~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 151 (267)
T 1sny_A 78 EIDLRNFD------AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKK 151 (267)
T ss_dssp ECCTTCGG------GHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EecCCChH------HHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhh
Confidence 99999987 5555554 6999999999754 1 2345678899999999999888653
Q ss_pred C------C-----CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeeccee
Q psy17679 177 K------D-----LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWI 239 (303)
Q Consensus 177 ~------~-----~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~ 239 (303)
. + ..+||++||..+..... +..+...|..+|...+.+.+.+... .. ++++||++
T Consensus 152 ~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v 222 (267)
T 1sny_A 152 AAKANESQPMGVGRAAIINMSSILGSIQGN---------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWV 222 (267)
T ss_dssp HHHHTTTSCSSTTTCEEEEECCGGGCSTTC---------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSB
T ss_pred cccccccccccCCCceEEEEecccccccCC---------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcce
Confidence 0 1 47899999996643211 1123456888888888888766543 22 78889977
Q ss_pred cCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 240 DNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 240 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+..... ..++..+++|+.++.++....
T Consensus 223 ~t~~~~~---------------------~~~~~~~~~a~~~~~~~~~~~ 250 (267)
T 1sny_A 223 KTDMGGS---------------------SAPLDVPTSTGQIVQTISKLG 250 (267)
T ss_dssp CSTTTCT---------------------TCSBCHHHHHHHHHHHHHHCC
T ss_pred ecCCCCC---------------------CCCCCHHHHHHHHHHHHHhcC
Confidence 5443210 124788999999999998653
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.3e-19 Score=155.46 Aligned_cols=209 Identities=14% Similarity=0.069 Sum_probs=141.0
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|++.|+. |++++|+.... ..+.+.+.... ...++.++.+|+
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~---V~~~~~~~~~~-~~~~~~~~~~~------------~~~~~~~~~~Dv 109 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGAD---VAINYLPAEEE-DAQQVKALIEE------------CGRKAVLLPGDL 109 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECCGGGHH-HHHHHHHHHHH------------TTCCEEECCCCT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCcchh-HHHHHHHHHHH------------cCCcEEEEEecC
Confidence 357899999999999999999999999987 88888763321 12222222211 125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhcCCC--ceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREMKDL--KAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~~~~--~r~i 183 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. .. .+||
T Consensus 110 ~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~~g~Iv 182 (294)
T 3r3s_A 110 SDES------FARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPL-LPKGASII 182 (294)
T ss_dssp TSHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG-CCTTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH-hhcCCEEE
Confidence 9976 4554443 78999999997431 2345778999999999999999876 33 4999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+.. +......|..+|...+.+.+.+...+ . +.++||++.+.. .... ......
T Consensus 183 ~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~---~~~~-~~~~~~ 246 (294)
T 3r3s_A 183 TTSSIQAYQ------------PSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL---QISG-GQTQDK 246 (294)
T ss_dssp EECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH---HHTT-TSCGGG
T ss_pred EECChhhcc------------CCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccc---cccc-CCCHHH
Confidence 999996653 22345668888888888877665443 2 788898664422 1000 000011
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...+........+...+|+|+++++++....
T Consensus 247 ~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~ 277 (294)
T 3r3s_A 247 IPQFGQQTPMKRAGQPAELAPVYVYLASQES 277 (294)
T ss_dssp STTTTTTSTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 1111222223457899999999999987654
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=150.60 Aligned_cols=208 Identities=13% Similarity=0.049 Sum_probs=135.5
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+++||||+|+||+++++.|++.|+. |++++|+.... .+..+++.. ...++.++.+|++|.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~-------------~~~~~~~~~~D~~~~ 63 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFA---VAIADYNDATA--KAVASEINQ-------------AGGHAVAVKVDVSDR 63 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHH-------------TTCCEEEEECCTTSH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHh-------------cCCcEEEEEecCCCH
Confidence 478999999999999999999999987 88999964211 111111111 024688999999987
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC-CceEEEE
Q psy17679 124 GLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD-LKAFVHV 185 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~-~~r~i~i 185 (303)
+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. .+ ..+||++
T Consensus 64 ~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i 137 (256)
T 1geg_A 64 D------QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINA 137 (256)
T ss_dssp H------HHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred H------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 6 5666554 79999999997432 2345678899999998888777653 13 5799999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHh-----
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIAT----- 254 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~----- 254 (303)
||..+... ......|..+|...+.+.+.+...+ . ++++||++.+.+... .......
T Consensus 138 sS~~~~~~------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~ 204 (256)
T 1geg_A 138 CSQAGHVG------------NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE-IDRQVSEAAGKP 204 (256)
T ss_dssp CCGGGTSC------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHH-HHHHHHHHHTCC
T ss_pred CchhhcCC------------CCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhh-hhhhccccccCC
Confidence 99965432 2234567788887787777664332 2 788899765433111 1000000
Q ss_pred -hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 -GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 -~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+........+.+.+|+|++++.++..+.
T Consensus 205 ~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~ 239 (256)
T 1geg_A 205 LGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDS 239 (256)
T ss_dssp TTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 0000001011112347899999999999987653
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-18 Score=150.80 Aligned_cols=207 Identities=14% Similarity=0.094 Sum_probs=139.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|+++|+. |++++|+.... .+..+++... ...++.++.+|++
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~--~~~~~~l~~~------------~~~~~~~~~~Dv~ 80 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGAR---LVLSGRDVSEL--DAARRALGEQ------------FGTDVHTVAIDLA 80 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHH------------HCCCEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHHh------------cCCcEEEEEecCC
Confidence 67899999999999999999999999987 88999964321 1111111110 1257899999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~i 183 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. +...+||
T Consensus 81 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv 154 (266)
T 4egf_A 81 EPD------APAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAII 154 (266)
T ss_dssp STT------HHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 987 5555544 79999999997542 2345678899999999998887643 1246999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH-HHHHhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML-VGIATGV 256 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~-~~~~~~~ 256 (303)
++||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+........ .....
T Consensus 155 ~isS~~~~~------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~-- 220 (266)
T 4egf_A 155 TVASAAALA------------PLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSA-- 220 (266)
T ss_dssp EECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHH--
T ss_pred EEcchhhcc------------CCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHH--
Confidence 999996653 23345667888887887777665443 2 778898765433211000 00000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. ........+..++|+|+++++++....
T Consensus 221 --~~-~~~~p~~r~~~p~dva~~v~~L~s~~~ 249 (266)
T 4egf_A 221 --PM-IARIPLGRFAVPHEVSDAVVWLASDAA 249 (266)
T ss_dssp --HH-HTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred --HH-HhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 00 011112346789999999999987654
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.9e-18 Score=149.75 Aligned_cols=206 Identities=12% Similarity=0.107 Sum_probs=139.1
Q ss_pred ccCCcEEEEeCCc--chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGGT--GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGat--G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+++|+++||||+ |+||+++++.|++.|++ |++++|+.. ..+.++++... ...+.++.+
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~---V~~~~r~~~---~~~~~~~l~~~-------------~~~~~~~~~ 65 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAE---VALSYQAER---LRPEAEKLAEA-------------LGGALLFRA 65 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCE---EEEEESCGG---GHHHHHHHHHH-------------TTCCEEEEC
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCE---EEEEcCCHH---HHHHHHHHHHh-------------cCCcEEEEC
Confidence 3567899999999 99999999999999987 889999753 12233333221 024788999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc-CCC
Q psy17679 119 DCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM-KDL 179 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~ 179 (303)
|++|.+ ++..+++ ++|+||||||.... ...+...+++|+.++.++++++.+. .+.
T Consensus 66 D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 139 (261)
T 2wyu_A 66 DVTQDE------ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG 139 (261)
T ss_dssp CTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccC
Confidence 999976 5555554 78999999997532 2345678999999999999999875 112
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH-HHHHH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG-MLVGI 252 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~-~~~~~ 252 (303)
.+||++||..+.. +...+..|..+|...+.+.+.+...+ . ++++||++.+...... .....
T Consensus 140 g~iv~isS~~~~~------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~ 207 (261)
T 2wyu_A 140 GGIVTLTYYASEK------------VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKM 207 (261)
T ss_dssp EEEEEEECGGGTS------------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHH
T ss_pred CEEEEEecccccC------------CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHH
Confidence 5999999986542 22245568888888888877665433 2 7888997755432110 00111
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........+ ...+.+++|+|++++.++....
T Consensus 208 ~~~~~~~~p-----~~~~~~~~dva~~v~~l~s~~~ 238 (261)
T 2wyu_A 208 YDRVAQTAP-----LRRNITQEEVGNLGLFLLSPLA 238 (261)
T ss_dssp HHHHHHHST-----TSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHhcCC-----CCCCCCHHHHHHHHHHHcChhh
Confidence 110000111 1236789999999999987543
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=8e-19 Score=151.89 Aligned_cols=201 Identities=16% Similarity=0.149 Sum_probs=137.5
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEE-eCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLL-VRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~-~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
++|++|||||+|+||+++++.|+++|+. |+++ .|+... .+.+.+.+. ....++.++.+|++
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~---vv~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~Dv~ 64 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYN---IVINYARSKKA---ALETAEEIE------------KLGVKVLVVKANVG 64 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSCHHH---HHHHHHHHH------------TTTCCEEEEECCTT
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCE---EEEEcCCCHHH---HHHHHHHHH------------hcCCcEEEEEcCCC
Confidence 5789999999999999999999999997 6665 665321 111111111 11257899999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. ++..+||+
T Consensus 65 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~ 138 (258)
T 3oid_A 65 QPA------KIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVS 138 (258)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 976 5555554 67999999996432 2345678999999999998888542 25679999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChH-----HHHHHHH
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPI-----GMLVGIA 253 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~-----~~~~~~~ 253 (303)
+||..+.. +......|..+|...+.+.+.++..+. +.+.||++.+..... .......
T Consensus 139 isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 206 (258)
T 3oid_A 139 ISSLGSIR------------YLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDAR 206 (258)
T ss_dssp EEEGGGTS------------BCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHH
T ss_pred ECchhhCC------------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHH
Confidence 99996543 233456788888888888877655432 788899775543211 1111111
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. . ....+.+++|+|+++++++....
T Consensus 207 ~~----~-----p~~r~~~~~dva~~v~~L~s~~~ 232 (258)
T 3oid_A 207 QN----T-----PAGRMVEIKDMVDTVEFLVSSKA 232 (258)
T ss_dssp HH----C-----TTSSCBCHHHHHHHHHHHTSSTT
T ss_pred hc----C-----CCCCCcCHHHHHHHHHHHhCccc
Confidence 11 1 12347899999999999987654
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.4e-18 Score=146.57 Aligned_cols=200 Identities=14% Similarity=0.111 Sum_probs=139.2
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|+++||||+|+||+++++.|+++|+. |++++|+.... .+..+++... ...++.++.+|++|
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~~------------~~~~~~~~~~D~~~ 63 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYA---LALGARSVDRL--EKIAHELMQE------------QGVEVFYHHLDVSK 63 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHH------------HCCCEEEEECCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHhh------------cCCeEEEEEeccCC
Confidence 3689999999999999999999999987 88999974321 1111111110 12578899999999
Q ss_pred CCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEEe
Q psy17679 123 PGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVHVS 186 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~iS 186 (303)
.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. .+..++|++|
T Consensus 64 ~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~s 137 (235)
T 3l77_A 64 AE------SVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTT 137 (235)
T ss_dssp HH------HHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HH------HHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEe
Confidence 76 6666665 78999999998542 2345678899999999999888653 1345788888
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC--Cc--EEeecceecCccChHHHHHHHHhhhhhhccC
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN--RV--HISGTGWIDNVYGPIGMLVGIATGVLHTHLI 262 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~--~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~ 262 (303)
|..+... ......|..+|...+.+.+.+... .. +.+.||++.+.+... ..
T Consensus 138 S~~~~~~------------~~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~-------------~~- 191 (235)
T 3l77_A 138 SDVSARL------------IPYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGS-------------KP- 191 (235)
T ss_dssp CGGGSSC------------CTTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTC-------------CS-
T ss_pred cchhccc------------CCCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccc-------------cC-
Confidence 8854421 223456888888888888776221 22 788899776544211 01
Q ss_pred CCCccccceehhHHHHHHHHHHhhcccCC
Q psy17679 263 NLNTVTDMVPVDLVVNSMISIAWSIGESG 291 (303)
Q Consensus 263 ~~~~~~~~i~v~D~a~ai~~~~~~~~~~~ 291 (303)
.......++..+|+|++++.++.++...-
T Consensus 192 ~~~~~~~~~~p~dva~~v~~l~~~~~~~~ 220 (235)
T 3l77_A 192 GKPKEKGYLKPDEIAEAVRCLLKLPKDVR 220 (235)
T ss_dssp CCCGGGTCBCHHHHHHHHHHHHTSCTTCC
T ss_pred CcccccCCCCHHHHHHHHHHHHcCCCCCc
Confidence 11222357899999999999999876543
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.6e-18 Score=147.62 Aligned_cols=205 Identities=12% Similarity=0.049 Sum_probs=135.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+||||+|+||+++++.|++.|++ |++++|+.. .++++... +. ...++.++.+|++
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----~~-----~~~~~~~~~~D~~ 64 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAK---VMITGRHSD------VGEKAAKS-----VG-----TPDQIQFFQHDSS 64 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----HC-----CTTTEEEEECCTT
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-----hh-----ccCceEEEECCCC
Confidence 67799999999999999999999999987 889999642 12211110 00 0147889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCC-ceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDL-KAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~-~r~i 183 (303)
+.+ ++..+++ ++|+||||||.... ...+...+++|+.++..+.+.+.+. .+. .+||
T Consensus 65 ~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv 138 (251)
T 1zk4_A 65 DED------GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASII 138 (251)
T ss_dssp CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 876 5665554 58999999997532 2245678899999887776665432 145 7999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCc------CCc--EEeecceecCccChHHHHHHHHhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTP------NRV--HISGTGWIDNVYGPIGMLVGIATG 255 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~------~~~--~ii~pg~~~~~~g~~~~~~~~~~~ 255 (303)
++||..+... ......|..+|...+.+.+.+.. ... ++++||++.+..... . . ..
T Consensus 139 ~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~-~-~---~~ 201 (251)
T 1zk4_A 139 NMSSIEGFVG------------DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD-L-P---GA 201 (251)
T ss_dssp EECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT-S-T---TH
T ss_pred EeCCchhccC------------CCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh-c-C---ch
Confidence 9999966432 22456688888888887775542 222 788898664332110 0 0 00
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....+........+++++|+|++++.++..+.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 234 (251)
T 1zk4_A 202 EEAMSQRTKTPMGHIGEPNDIAYICVYLASNES 234 (251)
T ss_dssp HHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred hhhHHHhhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 000101111122358899999999999987653
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.80 E-value=4e-19 Score=153.81 Aligned_cols=206 Identities=13% Similarity=0.070 Sum_probs=133.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||++++++|+++|+. |++++|+.. .++++... ...++.++.+|++
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~ 65 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAK---VVIVDRDKA------GAERVAGE------------IGDAALAVAADIS 65 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH------------HCTTEEEEECCTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCHH------HHHHHHHH------------hCCceEEEEecCC
Confidence 56789999999999999999999999987 889999743 22222211 0257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc-------CCC
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM-------KDL 179 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~-------~~~ 179 (303)
+.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. +..
T Consensus 66 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~ 139 (261)
T 3n74_A 66 KEA------DVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQE 139 (261)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCC
Confidence 976 5555554 78999999997541 2345678899999998888877543 014
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIA 253 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~ 253 (303)
.+||++||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+......+ ...
T Consensus 140 ~~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~- 205 (261)
T 3n74_A 140 CVILNVASTGAGR------------PRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFM-GED- 205 (261)
T ss_dssp EEEEEECCTTTTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------
T ss_pred eEEEEeCchhhcC------------CCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhc-ccC-
Confidence 5799999996542 23345568888888888877665443 2 67789876443321110 000
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.......+........+++++|+|++++.++....
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~ 240 (261)
T 3n74_A 206 SEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQA 240 (261)
T ss_dssp -----------CTTSSCCCHHHHHHHHHHHTSGGG
T ss_pred cHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcc
Confidence 00011111122223458899999999999987543
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-18 Score=150.80 Aligned_cols=208 Identities=13% Similarity=0.128 Sum_probs=136.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|+. |++++|+.. +++++... +... .....++.++.+|++
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----~~~~-~~~~~~~~~~~~D~~ 68 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAK---VTITGRHAE------RLEETRQQ-----ILAA-GVSEQNVNSVVADVT 68 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----HHHT-TCCGGGEEEEECCTT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-----HHhc-ccCCCceeEEecccC
Confidence 56789999999999999999999999987 889999742 22221111 0000 011246889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceecc-----------ccccHHHHHhhhHHHHHHHHHHHHhc---CCCc
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVR-----------FDEHIKMAVKINVCGVQAMLQLAREM---KDLK 180 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~-----------~~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~ 180 (303)
|.+ ++..+++ ++|+||||||... ....+...+++|+.++.++++++.+. ++ .
T Consensus 69 ~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g 141 (278)
T 1spx_A 69 TDA------GQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-G 141 (278)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C
Confidence 976 5666655 8999999999753 22345678899999999998888654 13 7
Q ss_pred eEEEEeCCcc-cCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHH--HH
Q psy17679 181 AFVHVSTAFT-HCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGML--VG 251 (303)
Q Consensus 181 r~i~iSS~~~-~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~--~~ 251 (303)
+||++||..+ .. +......|..+|...+.+.+.+... .. ++++||++.+........ ..
T Consensus 142 ~iv~isS~~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~ 209 (278)
T 1spx_A 142 EIVNISSIASGLH------------ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEET 209 (278)
T ss_dssp EEEEECCTTSSSS------------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC----------
T ss_pred eEEEEeccccccc------------CCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchh
Confidence 9999999965 32 2224456888888888888766432 22 788999876544221100 00
Q ss_pred H------HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 252 I------ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 252 ~------~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. ........+ ...+++++|+|++++.++..+.
T Consensus 210 ~~~~~~~~~~~~~~~p-----~~~~~~~~dvA~~v~~l~s~~~ 247 (278)
T 1spx_A 210 SKKFYSTMATMKECVP-----AGVMGQPQDIAEVIAFLADRKT 247 (278)
T ss_dssp ----HHHHHHHHHHCT-----TSSCBCHHHHHHHHHHHHCHHH
T ss_pred hhhhhHHHHHHHhcCC-----CcCCCCHHHHHHHHHHHcCccc
Confidence 0 011000111 1247899999999999987654
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=2.8e-19 Score=153.53 Aligned_cols=202 Identities=10% Similarity=0.094 Sum_probs=136.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|++ |++++|++. +++++. + ..++.++.+|++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~-------------~-~~~~~~~~~D~~ 60 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGAK---VIATDINES------KLQELE-------------K-YPGIQTRVLDVT 60 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHGGGG-------------G-STTEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHH-------------h-ccCceEEEeeCC
Confidence 56789999999999999999999999987 889998632 111110 0 136889999999
Q ss_pred CCCCCCCHHHHHHH---hccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCC
Q psy17679 122 LPGLGLSETDRATL---VKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~~~~~~~---~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~ 188 (303)
|.+ ++..+ +.++|+||||||.... ...+...+++|+.++.++++++.+. ++..+||++||.
T Consensus 61 ~~~------~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~ 134 (246)
T 2ag5_A 61 KKK------QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSV 134 (246)
T ss_dssp CHH------HHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCS
T ss_pred CHH------HHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEech
Confidence 876 45544 3479999999997542 2345678899999999998887642 256899999998
Q ss_pred cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH-----HHHHhhhh
Q psy17679 189 FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML-----VGIATGVL 257 (303)
Q Consensus 189 ~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~-----~~~~~~~~ 257 (303)
.+.... + .....|..+|...+.+.+.+...+ . ++++||++.+........ ........
T Consensus 135 ~~~~~~----------~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~ 203 (246)
T 2ag5_A 135 ASSVKG----------V-VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFL 203 (246)
T ss_dssp BTTTBC----------C-TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHH
T ss_pred HhCcCC----------C-CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHH
Confidence 654321 1 134568888888888887765432 2 788898764432111010 00011010
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
... ....+++.+|+|++++.++..+.
T Consensus 204 ~~~-----~~~~~~~~~dvA~~v~~l~s~~~ 229 (246)
T 2ag5_A 204 KRQ-----KTGRFATAEEIAMLCVYLASDES 229 (246)
T ss_dssp HTC-----TTSSCEEHHHHHHHHHHHHSGGG
T ss_pred hcC-----CCCCCCCHHHHHHHHHHHhCccc
Confidence 010 11247899999999999987654
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-18 Score=150.56 Aligned_cols=196 Identities=11% Similarity=0.070 Sum_probs=131.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|++.|+. |++++|+.... .+.+. . .++.++.+|++
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~--~~~~~---~---------------~~~~~~~~Dv~ 81 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHGHR---VIISYRTEHAS--VTELR---Q---------------AGAVALYGDFS 81 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTTCC---EEEEESSCCHH--HHHHH---H---------------HTCEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCChHHH--HHHHH---h---------------cCCeEEECCCC
Confidence 56789999999999999999999999998 99999986532 11111 1 24789999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHV 185 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~i 185 (303)
+.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ++..+||++
T Consensus 82 ~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~i 155 (260)
T 3gem_A 82 CET------GIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHI 155 (260)
T ss_dssp SHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 976 5555554 68999999997532 2335678999999999998887643 255799999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecceecCccChH-HHHHHHHhhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGWIDNVYGPI-GMLVGIATGVLHT 259 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~~~~~~g~~-~~~~~~~~~~~~~ 259 (303)
||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+..... ........
T Consensus 156 sS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~~~~~~~~----- 218 (260)
T 3gem_A 156 SDDVTRK------------GSSKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAAYRANALA----- 218 (260)
T ss_dssp CCGGGGT------------CCSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-------------------
T ss_pred CChhhcC------------CCCCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHHHHHHHHh-----
Confidence 9996653 22345667788887777776654333 3 788898664332111 01111111
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
......+..++|+|+++++++..+
T Consensus 219 ----~~p~~r~~~~edva~~v~~L~~~~ 242 (260)
T 3gem_A 219 ----KSALGIEPGAEVIYQSLRYLLDST 242 (260)
T ss_dssp -----CCSCCCCCTHHHHHHHHHHHHCS
T ss_pred ----cCCCCCCCCHHHHHHHHHHHhhCC
Confidence 111123567899999999998543
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=152.32 Aligned_cols=206 Identities=15% Similarity=0.136 Sum_probs=136.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|+. |++++|+.... .+..+++.. ...++.++.+|++
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~-------------~~~~~~~~~~D~~ 80 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGAR---VYTCSRNEKEL--DECLEIWRE-------------KGLNVEGSVCDLL 80 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHH-------------TTCCEEEEECCTT
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHh-------------cCCceEEEECCCC
Confidence 66799999999999999999999999987 88999974211 111111111 0257889999999
Q ss_pred CCCCCCCHHHHHHHh--------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 122 LPGLGLSETDRATLV--------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~--------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
|.+ ++..++ .++|++|||||.... ...+...+++|+.++.++++++.+. .+..+||
T Consensus 81 ~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv 154 (273)
T 1ae1_A 81 SRT------ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVI 154 (273)
T ss_dssp CHH------HHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 876 455554 578999999997532 2346778899999999999888532 1568999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH-----HHH
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML-----VGI 252 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~-----~~~ 252 (303)
++||..+... ......|..+|...+.+.+.+...+ . ++++||++.+........ ...
T Consensus 155 ~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 222 (273)
T 1ae1_A 155 FLSSIAGFSA------------LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEE 222 (273)
T ss_dssp EECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHH
T ss_pred EEcCHhhcCC------------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHH
Confidence 9999976532 2244567788888888777664432 2 788899775443211000 000
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........+ ...+.+++|+|++++.++....
T Consensus 223 ~~~~~~~~p-----~~r~~~p~dvA~~v~~l~s~~~ 253 (273)
T 1ae1_A 223 IDNFIVKTP-----MGRAGKPQEVSALIAFLCFPAA 253 (273)
T ss_dssp HHHHHHHST-----TCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHhcCC-----CCCCcCHHHHHHHHHHHhCccc
Confidence 000000111 1237899999999999987543
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-18 Score=150.09 Aligned_cols=212 Identities=10% Similarity=0.093 Sum_probs=139.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|++.|+. |++++|+... ..+..+++... .....+.++.+|+
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~--~~~~~~~l~~~-----------~~~~~~~~~~~D~ 70 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAEGAN---VLINGRREEN--VNETIKEIRAQ-----------YPDAILQPVVADL 70 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSHHH--HHHHHHHHHHH-----------CTTCEEEEEECCT
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH--HHHHHHHHHhh-----------CCCceEEEEecCC
Confidence 467799999999999999999999999987 8899997432 11222222111 0014677899999
Q ss_pred CCCCCCCCHHHHHHHhc---cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeC
Q psy17679 121 SLPGLGLSETDRATLVK---QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVST 187 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~---~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS 187 (303)
++.+ .+..+++ ++|++|||||.... ...+...+++|+.++..+.+++.+. ++..+||++||
T Consensus 71 ~~~~------~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS 144 (267)
T 3t4x_A 71 GTEQ------GCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIAS 144 (267)
T ss_dssp TSHH------HHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECC
T ss_pred CCHH------HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence 9876 4555554 89999999997542 2345678999999988877666542 25679999999
Q ss_pred CcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHH----------
Q psy17679 188 AFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVG---------- 251 (303)
Q Consensus 188 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~---------- 251 (303)
..+.. +......|..+|...+.+.+.+...+. +.+.||++.+..... +...
T Consensus 145 ~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~~ 211 (267)
T 3t4x_A 145 EAAIM------------PSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVET-MLNSLYPNEQLTIE 211 (267)
T ss_dssp GGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHH-HHHHSSTTSCCCHH
T ss_pred hhhcc------------CCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHH-HHhhcCcccCCCHH
Confidence 96653 233456788888888888876654432 678898765432111 1110
Q ss_pred -HHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 252 -IATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 252 -~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........ .........+.+++|+|+++++++...+
T Consensus 212 ~~~~~~~~~-~~~~~~~~r~~~pedvA~~v~fL~s~~~ 248 (267)
T 3t4x_A 212 EAEKRFMKE-NRPTSIIQRLIRPEEIAHLVTFLSSPLS 248 (267)
T ss_dssp HHHHHHHHH-HCTTCSSCSCBCTHHHHHHHHHHHSGGG
T ss_pred HHHHHHhhc-cCCcccccCccCHHHHHHHHHHHcCccc
Confidence 00000000 0011123458899999999999987544
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-18 Score=149.68 Aligned_cols=204 Identities=11% Similarity=0.101 Sum_probs=141.0
Q ss_pred ccCCcEEEEeCCcch--hHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGGTGF--MGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGatG~--iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+++|+++||||+|+ ||+++++.|++.|+. |++++|+... .+.++++... . ...++.++.+
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~---------~--~~~~~~~~~~ 66 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGAR---LIFTYAGERL---EKSVHELAGT---------L--DRNDSIILPC 66 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCE---EEEEESSGGG---HHHHHHHHHT---------S--SSCCCEEEEC
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE---EEEecCchHH---HHHHHHHHHh---------c--CCCCceEEeC
Confidence 367899999999988 999999999999987 8888887432 2233332221 0 0137899999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc-CCC
Q psy17679 119 DCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM-KDL 179 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~ 179 (303)
|++|.+ ++..+++ .+|++|||||.... ...+...+++|+.++..+++++.+. .+.
T Consensus 67 D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 140 (266)
T 3oig_A 67 DVTNDA------EIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEG 140 (266)
T ss_dssp CCSSSH------HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC
T ss_pred CCCCHH------HHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCC
Confidence 999987 5555554 68999999997531 1234678899999999999999876 123
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH-----HH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI-----GM 248 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~-----~~ 248 (303)
.+||++||..+.. +...+..|..+|...+.+.+.+...+ . +.+.||++.+..... ..
T Consensus 141 g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~ 208 (266)
T 3oig_A 141 GSIVTLTYLGGEL------------VMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSI 208 (266)
T ss_dssp EEEEEEECGGGTS------------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHH
T ss_pred ceEEEEecccccc------------cCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHH
Confidence 5899999996653 23345678888888888777665443 2 788899775533211 11
Q ss_pred HHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 249 LVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...+.... ....+.+.+|+|++++.++....
T Consensus 209 ~~~~~~~~---------~~~~~~~p~dva~~v~~l~s~~~ 239 (266)
T 3oig_A 209 LKDIEERA---------PLRRTTTPEEVGDTAAFLFSDMS 239 (266)
T ss_dssp HHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHhcC---------CCCCCCCHHHHHHHHHHHcCCch
Confidence 11111111 11236789999999999998654
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=151.25 Aligned_cols=207 Identities=12% Similarity=0.116 Sum_probs=136.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
..+|+++||||+|+||++++++|++.|+. |+++.|.... ..+.+.+... ....++.++.+|++
T Consensus 5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~---v~~~~~~~~~--~~~~~~~~~~------------~~~~~~~~~~~Dl~ 67 (264)
T 3i4f_A 5 RFVRHALITAGTKGLGKQVTEKLLAKGYS---VTVTYHSDTT--AMETMKETYK------------DVEERLQFVQADVT 67 (264)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHTG------------GGGGGEEEEECCTT
T ss_pred cccCEEEEeCCCchhHHHHHHHHHHCCCE---EEEEcCCChH--HHHHHHHHHH------------hcCCceEEEEecCC
Confidence 34689999999999999999999999987 8888776432 1222222211 11257899999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceec--c-------ccccHHHHHhhhHHHHHHHHHHH----HhcCCCce
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATV--R-------FDEHIKMAVKINVCGVQAMLQLA----REMKDLKA 181 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~--~-------~~~~~~~~~~~N~~~~~~ll~~a----~~~~~~~r 181 (303)
|.+ ++..+++ ++|+||||||.. . ....+...+++|+.++..+++++ .+. +..+
T Consensus 68 ~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~ 140 (264)
T 3i4f_A 68 KKE------DLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGR 140 (264)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCe
Confidence 976 5665554 789999999942 1 12345678999999999999888 344 6689
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhh
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATG 255 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~ 255 (303)
||++||...... .+......|..+|...+.+.+.++..+ . +.+.||++.+....... ....
T Consensus 141 iv~iss~~~~~~----------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~-- 207 (264)
T 3i4f_A 141 IINYGFQGADSA----------PGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI-QEAR-- 207 (264)
T ss_dssp EEEECCTTGGGC----------CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH-HHHH--
T ss_pred EEEEeechhccc----------CCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc-HHHH--
Confidence 999999833211 122345677888887887777665432 2 78889877544322111 1111
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+........+.+++|+|++++.++....
T Consensus 208 ---~~~~~~~p~~r~~~~~dva~~v~~l~s~~~ 237 (264)
T 3i4f_A 208 ---QLKEHNTPIGRSGTGEDIARTISFLCEDDS 237 (264)
T ss_dssp ---HC--------CCCCHHHHHHHHHHHHSGGG
T ss_pred ---HHHhhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 111111222346899999999999998654
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-18 Score=150.90 Aligned_cols=211 Identities=13% Similarity=0.093 Sum_probs=137.1
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|+++|+. |++++|+.... .+..+++.. ...++.++.+|+
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~~--~~~~~~l~~-------------~~~~~~~~~~Dv 82 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIA---VYGCARDAKNV--SAAVDGLRA-------------AGHDVDGSSCDV 82 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHT-------------TTCCEEEEECCT
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHh-------------cCCcEEEEECCC
Confidence 356789999999999999999999999987 88999964211 111111111 125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-----CCCce
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-----KDLKA 181 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-----~~~~r 181 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. .+..+
T Consensus 83 ~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~ 156 (279)
T 3sju_A 83 TSTD------EVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGR 156 (279)
T ss_dssp TCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcE
Confidence 9976 5555544 78999999997542 2345678899999999999887651 25579
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHH---
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGI--- 252 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~--- 252 (303)
||++||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+..... .....
T Consensus 157 iV~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~ 223 (279)
T 3sju_A 157 IVNIASTGGKQ------------GVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAER-VREGYARH 223 (279)
T ss_dssp EEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHH-HHHSCCSS
T ss_pred EEEECChhhcc------------CCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHH-HHhhhhhc
Confidence 99999996653 22345567888887777777655443 2 688898764432111 00000
Q ss_pred ---HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ---ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ---~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........+........+.+++|+|++++.++....
T Consensus 224 ~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a 262 (279)
T 3sju_A 224 WGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAA 262 (279)
T ss_dssp SCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSSGG
T ss_pred ccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence 000000111111223357899999999999887554
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=149.51 Aligned_cols=202 Identities=13% Similarity=0.147 Sum_probs=133.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHH-HHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++|+++||||+|+||+++++.|++.|++ |++++|.... ..+.+ +++.. ...++.++.+|+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~ 63 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGAN---VVVNYAGNEQ--KANEVVDEIKK-------------LGSDAIAVRADV 63 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHHHH-------------TTCCEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCCHH--HHHHHHHHHHh-------------cCCcEEEEEcCC
Confidence 46789999999999999999999999987 8888883211 11111 11111 024788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+.+++.+. .+..+||
T Consensus 64 ~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 137 (246)
T 2uvd_A 64 ANAE------DVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIV 137 (246)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9876 5665554 79999999997532 2345678999999987777666432 1568999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChH---HHHHHHHh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPI---GMLVGIAT 254 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~---~~~~~~~~ 254 (303)
++||..+... ......|..+|...+.+.+.+... .. ++++||++.+.+... .....+..
T Consensus 138 ~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 205 (246)
T 2uvd_A 138 NIASVVGVTG------------NPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLK 205 (246)
T ss_dssp EECCTHHHHC------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHH
T ss_pred EECCHHhcCC------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHh
Confidence 9999955321 123456777787777776655432 22 788899875443211 11111111
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. ....+++.+|+|++++.++..+.
T Consensus 206 ----~~-----p~~~~~~~~dvA~~~~~l~s~~~ 230 (246)
T 2uvd_A 206 ----LI-----PAAQFGEAQDIANAVTFFASDQS 230 (246)
T ss_dssp ----TC-----TTCSCBCHHHHHHHHHHHHSGGG
T ss_pred ----cC-----CCCCCcCHHHHHHHHHHHcCchh
Confidence 01 11247899999999999987543
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.80 E-value=9e-19 Score=151.45 Aligned_cols=209 Identities=11% Similarity=0.127 Sum_probs=138.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|+++|+. |++++|+.. .++++... +. ....++.++.+|+
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----~~----~~~~~~~~~~~Dv 64 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGAR---VVITGRTKE------KLEEAKLE-----IE----QFPGQILTVQMDV 64 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----HC----CSTTCEEEEECCT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-----HH----hcCCcEEEEEccC
Confidence 467899999999999999999999999987 888999743 22221110 00 1125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~ 182 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ++..+|
T Consensus 65 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~i 138 (257)
T 3imf_A 65 RNTD------DIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNI 138 (257)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEE
Confidence 9976 5555554 78999999996432 2345778999999999998888432 246799
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC-----Cc--EEeecceecCccChHHHHHHHHhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN-----RV--HISGTGWIDNVYGPIGMLVGIATG 255 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~-----~~--~ii~pg~~~~~~g~~~~~~~~~~~ 255 (303)
|++||..+... ......|..+|...+.+.+.++.. .. +.+.||++.+......... ...
T Consensus 139 v~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~--~~~ 204 (257)
T 3imf_A 139 INMVATYAWDA------------GPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWI--SEE 204 (257)
T ss_dssp EEECCGGGGSC------------CTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC---------C
T ss_pred EEECchhhccC------------CCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhccc--CHH
Confidence 99999966532 224456777887777777665432 22 7888997754432111100 000
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...... .......+..++|+|++++.++....
T Consensus 205 ~~~~~~-~~~p~~r~~~pedvA~~v~~L~s~~~ 236 (257)
T 3imf_A 205 MAKRTI-QSVPLGRLGTPEEIAGLAYYLCSDEA 236 (257)
T ss_dssp CSHHHH-TTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHH-hcCCCCCCcCHHHHHHHHHHHcCchh
Confidence 000000 11112347899999999999997654
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.80 E-value=3e-18 Score=145.77 Aligned_cols=189 Identities=16% Similarity=0.114 Sum_probs=126.3
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|+|+||||+|+||+++++.|+++|++ |++++|++. .++++... ..++.++.+|++|
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~~-------------~~~~~~~~~D~~~ 61 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYR---VGLMARDEK------RLQALAAE-------------LEGALPLPGDVRE 61 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-------------STTCEEEECCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-------------hhhceEEEecCCC
Confidence 3578999999999999999999999987 889999642 22222111 1267889999998
Q ss_pred CCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHH----HhcCCCceEEE
Q psy17679 123 PGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLA----REMKDLKAFVH 184 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a----~~~~~~~r~i~ 184 (303)
.+ ++..+++ ++|+|||+||.... ...+...+++|+.++..+++.+ .+. +.++||+
T Consensus 62 ~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~iv~ 134 (234)
T 2ehd_A 62 EG------DWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-GGGTIVN 134 (234)
T ss_dssp HH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEE
T ss_pred HH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEE
Confidence 76 4555443 78999999997532 2345678899999987666555 344 6789999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+.. +......|..+|...+.+.+.+... .. ++++||++.+..... ...
T Consensus 135 isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------~~~ 193 (234)
T 2ehd_A 135 VGSLAGKN------------PFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN---------TPG 193 (234)
T ss_dssp ECCTTTTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC---------------------
T ss_pred ECCchhcC------------CCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc---------ccc
Confidence 99996543 2234556778888777776655432 22 788898764432110 000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
. ..+++.+|+|++++.++..+..
T Consensus 194 ~--------~~~~~~~dvA~~~~~l~~~~~~ 216 (234)
T 2ehd_A 194 Q--------AWKLKPEDVAQAVLFALEMPGH 216 (234)
T ss_dssp ------------CCHHHHHHHHHHHHHSCCS
T ss_pred c--------cCCCCHHHHHHHHHHHhCCCcc
Confidence 0 1157999999999999986643
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=152.14 Aligned_cols=206 Identities=11% Similarity=0.103 Sum_probs=138.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+||||+|+||++++++|+++|+. |++++|+... ..+.+.+.+.. ...++.++.+|++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~---V~~~~r~~~~--~~~~~~~~~~~------------~~~~~~~~~~D~~ 89 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGLK---VWINYRSNAE--VADALKNELEE------------KGYKAAVIKFDAA 89 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHHHH------------TTCCEEEEECCTT
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCCHH--HHHHHHHHHHh------------cCCceEEEECCCC
Confidence 56789999999999999999999999987 8899996431 12222222111 1257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++.+.+. ++..+||+
T Consensus 90 ~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~ 163 (271)
T 4iin_A 90 SES------DFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVN 163 (271)
T ss_dssp CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEE
Confidence 976 5555554 79999999998542 2345678899999998888777542 25679999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+...... .....
T Consensus 164 isS~~~~~------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~----- 225 (271)
T 4iin_A 164 VASIIGER------------GNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANL-KDELK----- 225 (271)
T ss_dssp ECCHHHHH------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----------------
T ss_pred EechhhcC------------CCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhh-cHHHH-----
Confidence 99986542 22245678888888888877665442 2 6788997755432211 00000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+........+.+++|+|++++.++..+.
T Consensus 226 ~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~ 255 (271)
T 4iin_A 226 ADYVKNIPLNRLGSAKEVAEAVAFLLSDHS 255 (271)
T ss_dssp --CGGGCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHhcCCcCCCcCHHHHHHHHHHHhCCCc
Confidence 111111222357899999999999988654
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=155.13 Aligned_cols=213 Identities=12% Similarity=0.089 Sum_probs=133.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+||||||+|+||+++++.|++.|+. |++++|+.... .+..+.+... ....++.++.+|++
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~~---Vv~~~r~~~~~--~~~~~~l~~~-----------~~~~~~~~~~~Dl~ 69 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCK---VAIADIRQDSI--DKALATLEAE-----------GSGPEVMGVQLDVA 69 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHH-----------TCGGGEEEEECCTT
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCCE---EEEEECCHHHH--HHHHHHHHhc-----------CCCCeEEEEECCCC
Confidence 56789999999999999999999999987 99999974321 1111111111 01137889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---------CC
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---------KD 178 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---------~~ 178 (303)
+.+ ++..+++ ++|+||||||.... ...+...+++|+.++.++++++.+. ++
T Consensus 70 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~ 143 (319)
T 3ioy_A 70 SRE------GFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQK 143 (319)
T ss_dssp CHH------HHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCC
Confidence 976 5555554 67999999997532 2345678999999999998888654 02
Q ss_pred CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHH----HHHHHHHhhCcCCc--EEeecceecCccChH-HHHHH
Q psy17679 179 LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISE----TGDEELSEMTPNRV--HISGTGWIDNVYGPI-GMLVG 251 (303)
Q Consensus 179 ~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~----~~E~~~~~~~~~~~--~ii~pg~~~~~~g~~-~~~~~ 251 (303)
..+||++||..+... ......|..+|. +++.+...+..... +++.||++.+..... .....
T Consensus 144 ~g~iV~isS~a~~~~------------~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~ 211 (319)
T 3ioy_A 144 GGHVVNTASMAAFLA------------AGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPD 211 (319)
T ss_dssp CCEEEEECCGGGTCC------------CSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC------------
T ss_pred CcEEEEecccccccC------------CCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCch
Confidence 457999999976532 223456888888 44444444444333 788899775433221 11111
Q ss_pred HHhhhhh----hccCC-CCccccceehhHHHHHHHHHHhhcc
Q psy17679 252 IATGVLH----THLIN-LNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 252 ~~~~~~~----~~~~~-~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...+... ..... .......++++|+|++++.++..+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~~ 253 (319)
T 3ioy_A 212 ALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKANR 253 (319)
T ss_dssp -----------------CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred hhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcCC
Confidence 1111100 00000 1111123799999999999998764
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=154.72 Aligned_cols=166 Identities=16% Similarity=0.188 Sum_probs=119.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCccc--HHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKD--IQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~--~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
|++|++|||||+|+||+++++.|++.|+. |++.+|+..... ..+.+.+.... ...++.++.+|
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~~---V~~~~r~~~~r~~~~~~~l~~~~~~------------~~~~~~~~~~D 67 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGHR---VYASMRDIVGRNASNVEAIAGFARD------------NDVDLRTLELD 67 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESCTTTTTHHHHHHHHHHHHH------------HTCCEEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEecCcccccCHHHHHHHHHHHHh------------cCCcEEEEEee
Confidence 45689999999999999999999999997 889888743222 22222222111 12578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCce
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKA 181 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r 181 (303)
++|.+ ++..+++ ++|+||||||.... ...+...+++|+.++.++++++. +. +..+
T Consensus 68 vtd~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-~~g~ 140 (324)
T 3u9l_A 68 VQSQV------SVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-KHGL 140 (324)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEE
T ss_pred cCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCE
Confidence 99976 5666655 89999999997532 23456788999999999999884 44 6789
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceec
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWID 240 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~ 240 (303)
||++||..+... +......|..+|...+.+.+.+...+ . +++.||.+.
T Consensus 141 iV~isS~~~~~~-----------~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~ 194 (324)
T 3u9l_A 141 LIWISSSSSAGG-----------TPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFT 194 (324)
T ss_dssp EEEECCGGGTSC-----------CCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-
T ss_pred EEEEecchhccC-----------CCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccc
Confidence 999999966521 11234568888888888887765442 2 788899774
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.2e-18 Score=150.53 Aligned_cols=211 Identities=15% Similarity=0.108 Sum_probs=142.0
Q ss_pred cccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEE
Q psy17679 38 MQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVA 117 (303)
Q Consensus 38 ~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~ 117 (303)
+...+++|+++||||+|+||+++++.|++.|+. |++++|+..... +..+++... ..++.++.
T Consensus 27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~~~--~~~~~~~~~-------------~~~~~~~~ 88 (275)
T 4imr_A 27 TIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAH---VILHGVKPGSTA--AVQQRIIAS-------------GGTAQELA 88 (275)
T ss_dssp HHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSTTTTH--HHHHHHHHT-------------TCCEEEEE
T ss_pred ccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEcCCHHHHH--HHHHHHHhc-------------CCeEEEEE
Confidence 334577899999999999999999999999987 889999765432 111222111 25788999
Q ss_pred ecCCCCCCCCCHHHHHHHhc------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCce
Q psy17679 118 GDCSLPGLGLSETDRATLVK------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKA 181 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~~------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r 181 (303)
+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ++..+
T Consensus 89 ~Dv~~~~------~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~ 162 (275)
T 4imr_A 89 GDLSEAG------AGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGR 162 (275)
T ss_dssp CCTTSTT------HHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred ecCCCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcE
Confidence 9999987 4555554 78999999997432 2345678999999999998887542 25679
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH--HHHH
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML--VGIA 253 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~--~~~~ 253 (303)
||++||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+........ ....
T Consensus 163 Iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~ 230 (275)
T 4imr_A 163 VVSIGSINQLR------------PKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGW 230 (275)
T ss_dssp EEEECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHH
T ss_pred EEEECCHHhCC------------CCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHH
Confidence 99999996643 23344567788887777777665443 2 678899775443211100 0001
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........ ....+...+|+|+++++++...+
T Consensus 231 ~~~~~~~~----p~~r~~~pedvA~~v~fL~s~~a 261 (275)
T 4imr_A 231 DEYVRTLN----WMGRAGRPEEMVGAALFLASEAC 261 (275)
T ss_dssp HHHHHHHS----TTCSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHHhhcC----ccCCCcCHHHHHHHHHHHcCccc
Confidence 11111110 11235789999999999988654
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.1e-18 Score=151.52 Aligned_cols=213 Identities=14% Similarity=0.128 Sum_probs=141.3
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
..+++|++|||||+|+||+++++.|++.|+....|++++|+... .+.+.+.+.. . ....++.++.+|
T Consensus 29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~---~~~~~~~l~~--------~--~~~~~~~~~~~D 95 (287)
T 3rku_A 29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEK---LEELKKTIDQ--------E--FPNAKVHVAQLD 95 (287)
T ss_dssp HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHH---HHHHHHHHHH--------H--CTTCEEEEEECC
T ss_pred hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHH---HHHHHHHHHh--------h--CCCCeEEEEECC
Confidence 45788999999999999999999999998743448899997432 1111111110 0 012578899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceecc--------ccccHHHHHhhhHHHHHHHHHHHHhc---CCCce
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVR--------FDEHIKMAVKINVCGVQAMLQLAREM---KDLKA 181 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~--------~~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r 181 (303)
++|.+ ++..+++ ++|++|||||... ....+...+++|+.++..+++++.+. ++..+
T Consensus 96 v~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~ 169 (287)
T 3rku_A 96 ITQAE------KIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGD 169 (287)
T ss_dssp TTCGG------GHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred CCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 99987 5666655 6899999999753 12346788999999999999888432 25679
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhh
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATG 255 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~ 255 (303)
||++||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+.+........ ..
T Consensus 170 IV~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~--~~ 235 (287)
T 3rku_A 170 IVNLGSIAGRD------------AYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGN--EE 235 (287)
T ss_dssp EEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTC--HH
T ss_pred EEEECChhhcC------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCc--HH
Confidence 99999996653 22345667788887887777665443 2 78889987554311100000 00
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.....+.. ..++..+|+|++++.++..+..
T Consensus 236 ~~~~~~~~----~~p~~pedvA~~v~~l~s~~~~ 265 (287)
T 3rku_A 236 QAKNVYKD----TTPLMADDVADLIVYATSRKQN 265 (287)
T ss_dssp HHHHHHTT----SCCEEHHHHHHHHHHHHTSCTT
T ss_pred HHHHhhcc----cCCCCHHHHHHHHHHHhCCCCC
Confidence 00000100 1134899999999999986653
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=151.94 Aligned_cols=214 Identities=13% Similarity=0.036 Sum_probs=139.8
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
..+++|++|||||+|+||+++++.|++.|+. |+++.|.... ..+.+.+.+.. ...++.++.+|
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~---V~~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~D 76 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAK---VVVNYANSTK--DAEKVVSEIKA------------LGSDAIAIKAD 76 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHHHH------------TTCCEEEEECC
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCCHH--HHHHHHHHHHh------------cCCcEEEEEcC
Confidence 4577899999999999999999999999997 7777765321 11222111110 12578899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEE
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVH 184 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~ 184 (303)
++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. ....+||+
T Consensus 77 v~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~ 150 (270)
T 3is3_A 77 IRQVP------EIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVL 150 (270)
T ss_dssp TTSHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEE
Confidence 99976 5555554 78999999998542 2345788999999999999999876 12349999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHH------
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGI------ 252 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~------ 252 (303)
+||..+.. .+......|..+|...+.+.+.+...+ . +.+.||++.+...... ....
T Consensus 151 isS~~~~~-----------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~ 218 (270)
T 3is3_A 151 TSSNTSKD-----------FSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEV-SHHYIPNGTS 218 (270)
T ss_dssp ECCTTTTT-----------CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHH-GGGGSTTGGG
T ss_pred EeCchhcc-----------CCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhh-hhhccccccc
Confidence 99985321 123345668888888888877665443 2 7888997754431100 0000
Q ss_pred -HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 -ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 -~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........+........+.+++|+|+++++++....
T Consensus 219 ~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~ 255 (270)
T 3is3_A 219 YTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEG 255 (270)
T ss_dssp SCHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred cchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcc
Confidence 000000000001112246789999999999987554
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.79 E-value=8e-19 Score=151.20 Aligned_cols=202 Identities=16% Similarity=0.122 Sum_probs=117.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||++++++|++.|+. |++++|+.... .+..+++.. ...++.++.+|++
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~-------------~~~~~~~~~~D~~ 68 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAA---VVVADINAEAA--EAVAKQIVA-------------DGGTAISVAVDVS 68 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHH-------------TTCEEEEEECCTT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEcCCHHHH--HHHHHHHHh-------------cCCcEEEEEccCC
Confidence 56799999999999999999999999987 88999964311 111111111 1257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceecc----------ccccHHHHHhhhHHHHHHHHHHHH----hcCCCc
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVR----------FDEHIKMAVKINVCGVQAMLQLAR----EMKDLK 180 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~----------~~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~ 180 (303)
|.+ ++..+++ ++|++|||||... ....+...+++|+.++..+.+.+. +. +..
T Consensus 69 ~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g 141 (253)
T 3qiv_A 69 DPE------SAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-GGG 141 (253)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCC
Confidence 976 5555554 7999999999731 123456788999999776666554 33 567
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHh
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIAT 254 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~ 254 (303)
+||++||..+.. ....|..+|...+.+.+.+...+ . +.+.||++.+.............
T Consensus 142 ~iv~isS~~~~~---------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~ 206 (253)
T 3qiv_A 142 AIVNQSSTAAWL---------------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVD 206 (253)
T ss_dssp EEEEECC--------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC------------------
T ss_pred EEEEECCccccC---------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHH
Confidence 999999996542 12235566666666666554433 2 77889876543321111110000
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. ...+.....+..++|+|++++.++....
T Consensus 207 ~-----~~~~~~~~~~~~~~dva~~~~~l~s~~~ 235 (253)
T 3qiv_A 207 D-----IVKGLPLSRMGTPDDLVGMCLFLLSDEA 235 (253)
T ss_dssp ------------------CCHHHHHHHHHHSGGG
T ss_pred H-----HhccCCCCCCCCHHHHHHHHHHHcCccc
Confidence 0 1111122346689999999999987654
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.4e-19 Score=152.32 Aligned_cols=199 Identities=14% Similarity=0.083 Sum_probs=134.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|+++|+. |++++|... +..++ ...++.++.+|++
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~-----~~~~~----------------~~~~~~~~~~D~~ 62 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQ---VVVLDIRGE-----DVVAD----------------LGDRARFAAADVT 62 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHHTCE---EEEEESSCH-----HHHHH----------------TCTTEEEEECCTT
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCchH-----HHHHh----------------cCCceEEEECCCC
Confidence 56789999999999999999999999987 888888432 11111 1257889999999
Q ss_pred CCCCCCCHHHHHHHhc------cccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc--------
Q psy17679 122 LPGLGLSETDRATLVK------QVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM-------- 176 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~------~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~-------- 176 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+.
T Consensus 63 ~~~------~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~ 136 (257)
T 3tl3_A 63 DEA------AVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVG 136 (257)
T ss_dssp CHH------HHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC-
T ss_pred CHH------HHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccc
Confidence 976 5555554 89999999997421 2346788999999999999888753
Q ss_pred ---CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH
Q psy17679 177 ---KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG 247 (303)
Q Consensus 177 ---~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~ 247 (303)
++..+||++||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+......
T Consensus 137 ~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 204 (257)
T 3tl3_A 137 PNAEERGVIINTASVAAFD------------GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL 204 (257)
T ss_dssp -CCCCSEEEEEECCCC--C------------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---
T ss_pred cccCCCcEEEEEcchhhcC------------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc
Confidence 1345899999996542 33356678888887777776654433 2 7888998765442211
Q ss_pred HHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 248 MLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
............+ ....+.+.+|+|+++++++.++
T Consensus 205 -~~~~~~~~~~~~~----~~~r~~~p~dva~~v~~l~s~~ 239 (257)
T 3tl3_A 205 -PEEARASLGKQVP----HPSRLGNPDEYGALAVHIIENP 239 (257)
T ss_dssp -CHHHHHHHHHTSS----SSCSCBCHHHHHHHHHHHHHCT
T ss_pred -cHHHHHHHHhcCC----CCCCccCHHHHHHHHHHHhcCC
Confidence 0001110000111 1134789999999999999764
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=148.15 Aligned_cols=193 Identities=14% Similarity=0.126 Sum_probs=131.7
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
||+||||||+|+||+++++.|+++|+. |++++|+.. .++++.. ....++.++.+|+++.
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~~~ 59 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKA---TYLTGRSES------KLSTVTN------------CLSNNVGYRARDLASH 59 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCC---EEEEESCHH------HHHHHHH------------TCSSCCCEEECCTTCH
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------HHhhccCeEeecCCCH
Confidence 367999999999999999999999988 999999742 2222221 1125788999999997
Q ss_pred CCCCCHHHHHHHhccc----cEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEEeCCcc
Q psy17679 124 GLGLSETDRATLVKQV----NIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVHVSTAFT 190 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~----dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~iSS~~~ 190 (303)
+ ++..+++++ |++|||||.... ...+...+++|+.++..+++++.+. ....+||++||..+
T Consensus 60 ~------~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~ 133 (230)
T 3guy_A 60 Q------EVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAA 133 (230)
T ss_dssp H------HHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGG
T ss_pred H------HHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeccc
Confidence 6 677777643 999999997532 2345678899999999999888764 11239999999966
Q ss_pred cCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhhhccCCC
Q psy17679 191 HCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLHTHLINL 264 (303)
Q Consensus 191 ~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~ 264 (303)
.. +......|..+|...+.+.+.+...+ . +.+.||.+.+..... .. ..
T Consensus 134 ~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~---------~~ 187 (230)
T 3guy_A 134 QQ------------PKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWET-----SG---------KS 187 (230)
T ss_dssp TS------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-------------------------
T ss_pred CC------------CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHh-----cC---------CC
Confidence 53 22345668888887888777665443 2 677898764432111 00 01
Q ss_pred CccccceehhHHHHHHHHHHhhccc
Q psy17679 265 NTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 265 ~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.....+++++|+|++++.++.++..
T Consensus 188 ~~~~~~~~~~dvA~~i~~l~~~~~~ 212 (230)
T 3guy_A 188 LDTSSFMSAEDAALMIHGALANIGN 212 (230)
T ss_dssp -----CCCHHHHHHHHHHHCCEETT
T ss_pred CCcccCCCHHHHHHHHHHHHhCcCC
Confidence 1134578999999999999886654
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-18 Score=149.29 Aligned_cols=195 Identities=11% Similarity=0.093 Sum_probs=133.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|+++|+. |++++|+.... ..+.++.+|+
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~--------------------------~~~~~~~~Dl 68 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGLAIARAFADAGDK---VAITYRSGEPP--------------------------EGFLAVKCDI 68 (253)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSSCCC--------------------------TTSEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCChHhh--------------------------ccceEEEecC
Confidence 356789999999999999999999999987 88999975421 3477899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++..+++ .+|++|||||.... ...+...+++|+.++..+++++.+. .+..+||
T Consensus 69 ~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv 142 (253)
T 2nm0_A 69 TDTE------QVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVV 142 (253)
T ss_dssp TSHH------HHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 9876 5555544 57999999997532 2456788999999999998877542 2567999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+.. +......|..+|...+.+.+.+... .. ++++||++.+..... ... ...
T Consensus 143 ~isS~~~~~------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~----~~~ 205 (253)
T 2nm0_A 143 LISSVVGLL------------GSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV-LTD----EQR 205 (253)
T ss_dssp EECCCCCCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC--------------CH
T ss_pred EECchhhCC------------CCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh-cCH----HHH
Confidence 999986542 2234567888888888777765432 23 788899775443211 000 000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.... .......+++.+|+|++++.++..+.
T Consensus 206 ~~~~-~~~p~~~~~~p~dvA~~i~~l~s~~~ 235 (253)
T 2nm0_A 206 ANIV-SQVPLGRYARPEEIAATVRFLASDDA 235 (253)
T ss_dssp HHHH-TTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHH-hcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 0000 00111247899999999999987653
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=152.04 Aligned_cols=214 Identities=14% Similarity=0.091 Sum_probs=138.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|++.|+. |++++|+.... .+..+++... ....+.++.+|+
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~~--~~~~~~~~~~------------~~~~~~~~~~Dv 92 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEGYS---VVITGRRPDVL--DAAAGEIGGR------------TGNIVRAVVCDV 92 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHH------------HSSCEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHHH--HHHHHHHHhc------------CCCeEEEEEcCC
Confidence 457899999999999999999999999987 88999974321 1111111111 013458999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CC--Cc
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KD--LK 180 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~--~~ 180 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+.+++.+. .+ ..
T Consensus 93 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g 166 (281)
T 4dry_A 93 GDPD------QVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGG 166 (281)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCc
Confidence 9976 5555554 67999999997432 2345678999999988887777543 12 46
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHh
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIAT 254 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~ 254 (303)
+||++||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+.... ....
T Consensus 167 ~IV~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~-----~~~~ 229 (281)
T 4dry_A 167 RIINNGSISAQT------------PRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA-----RMST 229 (281)
T ss_dssp EEEEECCGGGTC------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC------------C
T ss_pred EEEEECCHHhCC------------CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh-----hhcc
Confidence 999999996643 23345668888888888777665432 2 67889877544321 1111
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcccCCcchhh
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGESGKVEKA 296 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~~~~ 296 (303)
.... .. .......++..+|+|+++++++..+......+..
T Consensus 230 ~~~~-~~-~~~~~~~~~~pedvA~~v~fL~s~~~~~~i~~~~ 269 (281)
T 4dry_A 230 GVLQ-AN-GEVAAEPTIPIEHIAEAVVYMASLPLSANVLTMT 269 (281)
T ss_dssp EEEC-TT-SCEEECCCBCHHHHHHHHHHHHHSCTTEEEEEEE
T ss_pred hhhh-hh-hcccccCCCCHHHHHHHHHHHhCCCccCccccEE
Confidence 1110 01 1111234789999999999999988765544433
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.5e-18 Score=149.23 Aligned_cols=202 Identities=14% Similarity=0.129 Sum_probs=138.3
Q ss_pred ccCCcEEEEeCCc--chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGGT--GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGat--G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+++|+++||||+ |+||+++++.|++.|++ |++++|+.. ..+.++++... ..++.++.+
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~---V~~~~r~~~---~~~~~~~l~~~-------------~~~~~~~~~ 78 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFHREGAQ---LAFTYATPK---LEKRVREIAKG-------------FGSDLVVKC 78 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCE---EEEEESSGG---GHHHHHHHHHH-------------TTCCCEEEC
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCE---EEEEeCCHH---HHHHHHHHHHh-------------cCCeEEEEc
Confidence 3677999999999 99999999999999987 889999753 12233333221 024678999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhcC--C
Q psy17679 119 DCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREMK--D 178 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~~--~ 178 (303)
|++|.+ ++..+++ ++|+||||||.... ...+...+++|+.++.++++++.+.- .
T Consensus 79 Dl~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 152 (285)
T 2p91_A 79 DVSLDE------DIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR 152 (285)
T ss_dssp CTTCHH------HHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 999876 5555554 78999999997532 12456788999999999999998751 2
Q ss_pred CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH-----H
Q psy17679 179 LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI-----G 247 (303)
Q Consensus 179 ~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~-----~ 247 (303)
..+||++||..+.. +...+..|..+|...+.+.+.+...+ . ++++||++.+..... .
T Consensus 153 ~g~iv~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~ 220 (285)
T 2p91_A 153 NGAIVTLSYYGAEK------------VVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHL 220 (285)
T ss_dssp CCEEEEEECGGGTS------------BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHH
T ss_pred CCEEEEEccchhcc------------CCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHH
Confidence 37999999986542 12234567788888888777664432 2 788899876543211 1
Q ss_pred HHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 248 MLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....+... .+ ...+.+++|+|++++.++....
T Consensus 221 ~~~~~~~~----~p-----~~~~~~~~dva~~~~~l~s~~~ 252 (285)
T 2p91_A 221 LMEHTTKV----NP-----FGKPITIEDVGDTAVFLCSDWA 252 (285)
T ss_dssp HHHHHHHH----ST-----TSSCCCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHhc----CC-----CCCCcCHHHHHHHHHHHcCCcc
Confidence 11111111 11 1236789999999999987543
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-18 Score=148.96 Aligned_cols=202 Identities=13% Similarity=0.114 Sum_probs=134.1
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|++.|+. |++++|+.... .+..+++... . ....++.++.+|+
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~~---------~-~~~~~~~~~~~Dv 68 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGYR---VVLIARSKQNL--EKVHDEIMRS---------N-KHVQEPIVLPLDI 68 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTCE---EEEEESCHHHH--HHHHHHHHHH---------C-TTSCCCEEEECCT
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEECCHHHH--HHHHHHHHHh---------c-cccCcceEEeccC
Confidence 356799999999999999999999999987 88999974321 1111111110 0 0115788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ++..+||+
T Consensus 69 ~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~ 142 (250)
T 3nyw_A 69 TDCT------KADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFN 142 (250)
T ss_dssp TCHH------HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 9976 4555543 68999999997432 2345678899999999998887542 25679999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+... ..+...|..+|...+.+.+.++..+ . +.+.||++.+... ...
T Consensus 143 isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~-----~~~------ 199 (250)
T 3nyw_A 143 VASRAAKYG------------FADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMA-----KKA------ 199 (250)
T ss_dssp ECC-------------------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHH-----HHT------
T ss_pred EccHHhcCC------------CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchh-----hhc------
Confidence 999965431 1124567777877777777655443 2 6788987644321 110
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
........+++.+|+|++++.++..+..
T Consensus 200 ---~~~~~~~~~~~p~dva~~v~~l~s~~~~ 227 (250)
T 3nyw_A 200 ---GTPFKDEEMIQPDDLLNTIRCLLNLSEN 227 (250)
T ss_dssp ---TCCSCGGGSBCHHHHHHHHHHHHTSCTT
T ss_pred ---CCCcccccCCCHHHHHHHHHHHHcCCCc
Confidence 0111224578999999999999986654
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=148.00 Aligned_cols=186 Identities=12% Similarity=0.083 Sum_probs=131.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|++|+++||||+|+||+++++.|+++|++ |++++|++.... ....++.+|++
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~---V~~~~r~~~~~~-------------------------~~~~~~~~D~~ 52 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYT---VLNIDLSANDQA-------------------------DSNILVDGNKN 52 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEE---EEEEESSCCTTS-------------------------SEEEECCTTSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEecCccccc-------------------------cccEEEeCCCC
Confidence 45689999999999999999999999987 889999864221 24567789998
Q ss_pred CCCCCCCHHHHHHHh---------ccccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEE
Q psy17679 122 LPGLGLSETDRATLV---------KQVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~---------~~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i 183 (303)
+.+ ++..++ .++|+||||||.... ...+...+++|+.++..+++++.+. ....+||
T Consensus 53 ~~~------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv 126 (236)
T 1ooe_A 53 WTE------QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQ 126 (236)
T ss_dssp HHH------HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEE
Confidence 865 444444 379999999996431 2345678899999999999998774 1125999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC------c--EEeecceecCccChHHHHHHHHhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR------V--HISGTGWIDNVYGPIGMLVGIATG 255 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~------~--~ii~pg~~~~~~g~~~~~~~~~~~ 255 (303)
++||..+.. +......|..+|...+.+.+.+...+ . ++++||++.+... .....
T Consensus 127 ~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~-----~~~~~- 188 (236)
T 1ooe_A 127 LTGAAAAMG------------PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN-----RKWMP- 188 (236)
T ss_dssp EECCGGGGS------------CCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH-----HHHST-
T ss_pred EECchhhcc------------CCCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcch-----hhcCC-
Confidence 999996643 22345678888888888887764432 2 7888986643321 11100
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
......+++.+|+|++++.++..+
T Consensus 189 --------~~~~~~~~~~~dvA~~i~~~l~s~ 212 (236)
T 1ooe_A 189 --------NADHSSWTPLSFISEHLLKWTTET 212 (236)
T ss_dssp --------TCCGGGCBCHHHHHHHHHHHHHCG
T ss_pred --------CccccccCCHHHHHHHHHHHHcCC
Confidence 111234678899999999777444
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-18 Score=152.46 Aligned_cols=207 Identities=14% Similarity=0.025 Sum_probs=138.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|++.|+. |++++|+..... +..+++. . ....++.++.+|+
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~~~--~~~~~l~---------~---~~~~~~~~~~~Dv 100 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGAN---VAVAARSPRELS--SVTAELG---------E---LGAGNVIGVRLDV 100 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSGGGGH--HHHHHHT---------T---SSSSCEEEEECCT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHHHHH--HHHHHHH---------h---hCCCcEEEEEEeC
Confidence 467899999999999999999999999987 889999754322 1111111 0 1114788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~ 182 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++. +. +..+|
T Consensus 101 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~i 173 (293)
T 3rih_A 101 SDPG------SCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-GRGRV 173 (293)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-SSCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEE
Confidence 9976 4554443 78999999997542 23457789999999999998874 33 66899
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGV 256 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~ 256 (303)
|++||..+... +......|..+|...+.+.+.+...+ . +.+.||++.+..... .........
T Consensus 174 V~isS~~~~~~-----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~ 241 (293)
T 3rih_A 174 ILTSSITGPVT-----------GYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVD-MGEEYISGM 241 (293)
T ss_dssp EEECCSBTTTB-----------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH-TCHHHHHHH
T ss_pred EEEeChhhccC-----------CCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhh-ccHHHHHHH
Confidence 99999865311 12245678888888888777665432 2 788898764432111 001111111
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
... .....+...+|+|+++++++....
T Consensus 242 ~~~-----~p~~r~~~p~dvA~~v~fL~s~~a 268 (293)
T 3rih_A 242 ARS-----IPMGMLGSPVDIGHLAAFLATDEA 268 (293)
T ss_dssp HTT-----STTSSCBCHHHHHHHHHHHHSGGG
T ss_pred Hhc-----CCCCCCCCHHHHHHHHHHHhCccc
Confidence 111 111235689999999999987654
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.8e-18 Score=149.00 Aligned_cols=206 Identities=10% Similarity=0.082 Sum_probs=134.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|++.|+. |++++|+... .+.+.+.+.. ...++.++.+|++
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~---~~~~~~~l~~------------~~~~~~~~~~Dv~ 63 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAK---ILLGARRQAR---IEAIATEIRD------------AGGTALAQVLDVT 63 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHHHHHHH------------TTCEEEEEECCTT
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHHh------------cCCcEEEEEcCCC
Confidence 45789999999999999999999999987 8889987431 1121111110 1257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+.+++.+. ++..+||+
T Consensus 64 d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~ 137 (264)
T 3tfo_A 64 DRH------SVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIIN 137 (264)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 976 4555543 78999999997542 2345778999999998888777542 25679999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC--c--EEeecceecCccChHHHHHHHHhhhhhhc
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR--V--HISGTGWIDNVYGPIGMLVGIATGVLHTH 260 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~--~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~ 260 (303)
+||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+...... ........
T Consensus 138 isS~~~~~------------~~~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~-----~~~~~~~~ 200 (264)
T 3tfo_A 138 IGSIGALS------------VVPTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTI-----THEETMAA 200 (264)
T ss_dssp ECCGGGTC------------CCTTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC---------------------
T ss_pred EcCHHHcc------------cCCCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccc-----cchhHHHH
Confidence 99996653 22345567788887787777654332 2 6788997754432110 00000000
Q ss_pred cCCCCccccceehhHHHHHHHHHHhhcccC
Q psy17679 261 LINLNTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 261 ~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
.. .....++..+|+|++++.++..+...
T Consensus 201 ~~--~~~~~~~~pedvA~~v~~l~s~~~~~ 228 (264)
T 3tfo_A 201 MD--TYRAIALQPADIARAVRQVIEAPQSV 228 (264)
T ss_dssp ---------CCCHHHHHHHHHHHHHSCTTE
T ss_pred HH--hhhccCCCHHHHHHHHHHHhcCCccC
Confidence 00 01112478999999999999977654
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-18 Score=150.17 Aligned_cols=210 Identities=13% Similarity=0.097 Sum_probs=135.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|+. |++++|+.... .+..+++... . ...++.++.+|++
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~~---------~--~~~~~~~~~~D~~ 74 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGAK---LSLVDVSSEGL--EASKAAVLET---------A--PDAEVLTTVADVS 74 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHH---------C--TTCCEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHhh---------c--CCceEEEEEccCC
Confidence 67799999999999999999999999987 88999974211 1111111110 0 0157889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAF 182 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~ 182 (303)
|.+ ++..+++ ++|+||||||.... ...+...+++|+.++..+.+.+. +. +..+|
T Consensus 75 ~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~i 147 (267)
T 1iy8_A 75 DEA------QVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMV 147 (267)
T ss_dssp SHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEE
Confidence 976 5555554 68999999997532 13456788999999887666554 33 56899
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGV 256 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~ 256 (303)
|++||..+... ......|..+|...+.+.+.+... .. ++++||++.+....... .......
T Consensus 148 v~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~ 214 (267)
T 1iy8_A 148 VNTASVGGIRG------------IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSM-KQLDPEN 214 (267)
T ss_dssp EEECCGGGTSB------------CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHH-HHHCTTC
T ss_pred EEEcchhhccC------------CCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccc-cccChhh
Confidence 99999966431 224556778888787777765433 22 78889876443311100 0000000
Q ss_pred hh----hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LH----THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~----~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. ... .......+.+.+|+|++++.++..+.
T Consensus 215 ~~~~~~~~~-~~~p~~r~~~~~dvA~~v~~l~s~~~ 249 (267)
T 1iy8_A 215 PRKAAEEFI-QVNPSKRYGEAPEIAAVVAFLLSDDA 249 (267)
T ss_dssp HHHHHHHHH-TTCTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred hhhHHHHHh-ccCCCCCCcCHHHHHHHHHHHcCccc
Confidence 00 111 11112347899999999999987553
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=148.77 Aligned_cols=195 Identities=12% Similarity=0.124 Sum_probs=131.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|++.|++ |++++|++... ..+..+.+|+
T Consensus 12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~--------------------------~~~~~~~~D~ 62 (247)
T 1uzm_A 12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHK---VAVTHRGSGAP--------------------------KGLFGVEVDV 62 (247)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSSCCC--------------------------TTSEEEECCT
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCChHHH--------------------------HHhcCeeccC
Confidence 467799999999999999999999999987 88999975421 2223488999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. .+..+||
T Consensus 63 ~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv 136 (247)
T 1uzm_A 63 TDSD------AVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMI 136 (247)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEE
Confidence 9876 4555544 68999999997532 2346788999999999998887642 2568999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+... ......|..+|...+.+.+.+... .. ++++||++.+..... +.........
T Consensus 137 ~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~ 203 (247)
T 1uzm_A 137 FIGSVSGLWG------------IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-LDERIQQGAL 203 (247)
T ss_dssp EECCCCC-----------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-SCHHHHHHHG
T ss_pred EECCHhhccC------------CCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh-cCHHHHHHHH
Confidence 9999965421 123456778888777777665433 22 788899775432111 0000001000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
... ....+++++|+|+++++++..+.
T Consensus 204 ~~~-----p~~~~~~~~dvA~~~~~l~s~~~ 229 (247)
T 1uzm_A 204 QFI-----PAKRVGTPAEVAGVVSFLASEDA 229 (247)
T ss_dssp GGC-----TTCSCBCHHHHHHHHHHHHSGGG
T ss_pred hcC-----CCCCCcCHHHHHHHHHHHcCccc
Confidence 011 11247899999999999987543
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-18 Score=150.36 Aligned_cols=204 Identities=12% Similarity=0.069 Sum_probs=134.9
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
..+++|+|+||||+|+||+++++.|++.|+. |+++.+... ....+..+++... ..++.++.+|
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~---v~i~~~r~~-~~~~~~~~~l~~~-------------~~~~~~~~~D 84 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAADGFN---IGVHYHRDA-AGAQETLNAIVAN-------------GGNGRLLSFD 84 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCH-HHHHHHHHHHHHT-------------TCCEEEEECC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCch-HHHHHHHHHHHhc-------------CCceEEEEec
Confidence 3466789999999999999999999999987 656554321 1112222222211 2578999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH-----hcCCCc
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR-----EMKDLK 180 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~-----~~~~~~ 180 (303)
++|.+ ++..+++ .+|+||||||.... ...+...+++|+.++.++++.+. .. +..
T Consensus 85 l~~~~------~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~g 157 (267)
T 4iiu_A 85 VANRE------QCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGAR-QGG 157 (267)
T ss_dssp TTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCE
T ss_pred CCCHH------HHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCc
Confidence 99976 5555554 79999999997542 23457788999999999988774 33 567
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChH--HHHHHH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPI--GMLVGI 252 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~--~~~~~~ 252 (303)
+||++||..+.. +......|..+|...+.+.+.+... .. ..+.||++.+..... ......
T Consensus 158 ~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~ 225 (267)
T 4iiu_A 158 RIITLSSVSGVM------------GNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEA 225 (267)
T ss_dssp EEEEECCHHHHH------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHH
T ss_pred EEEEEcchHhcc------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHH
Confidence 999999985542 1224556778887666666554433 23 778899776544321 111111
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.... ....+..++|+|++++.++....
T Consensus 226 ~~~~---------p~~~~~~~edva~~~~~L~s~~~ 252 (267)
T 4iiu_A 226 MSMI---------PMKRMGQAEEVAGLASYLMSDIA 252 (267)
T ss_dssp HHTC---------TTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HhcC---------CCCCCcCHHHHHHHHHHHhCCcc
Confidence 1111 11246789999999999987654
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.7e-18 Score=148.13 Aligned_cols=204 Identities=12% Similarity=0.096 Sum_probs=139.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|++.|+. |++++|.... ..+.+.+.+. ....++.++.+|++
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~~~~~~--~~~~~~~~l~------------~~~~~~~~~~~Dv~ 91 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAA---VALTYVNAAE--RAQAVVSEIE------------QAGGRAVAIRADNR 91 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHHH------------HTTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCCHH--HHHHHHHHHH------------hcCCcEEEEECCCC
Confidence 56799999999999999999999999997 7777665321 1112111111 01257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEe
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVS 186 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iS 186 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. .+..+||++|
T Consensus 92 d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 92 DAE------AIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 976 5555554 78999999997532 2345788999999999999998765 2356999999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH--HHHHHHHhhhhh
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI--GMLVGIATGVLH 258 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~--~~~~~~~~~~~~ 258 (303)
|..+... +......|..+|...+.+.+.+...+ . +.+.||++.+..... .........
T Consensus 166 S~~~~~~-----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~--- 231 (271)
T 3v2g_A 166 SNLAELV-----------PWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRER--- 231 (271)
T ss_dssp CGGGTCC-----------CSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHT---
T ss_pred ChhhccC-----------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhc---
Confidence 9754321 23345678888888888777665443 2 788899876544321 011111111
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. ....+...+|+|+++++++....
T Consensus 232 -~-----~~~r~~~pedvA~~v~fL~s~~~ 255 (271)
T 3v2g_A 232 -I-----ATGSYGEPQDIAGLVAWLAGPQG 255 (271)
T ss_dssp -C-----TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred -C-----CCCCCCCHHHHHHHHHHHhCccc
Confidence 1 11236789999999999987543
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-18 Score=151.65 Aligned_cols=212 Identities=12% Similarity=0.052 Sum_probs=139.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|++.|+. |++++|+.. .++++... +. ....++.++.+|++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~------~~~~~~~~-----l~----~~~~~~~~~~~Dv~ 87 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVT---VGALGRTRT------EVEEVADE-----IV----GAGGQAIALEADVS 87 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESSHH------HHHHHHHH-----HT----TTTCCEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-----HH----hcCCcEEEEEccCC
Confidence 45789999999999999999999999987 888998742 22221111 00 11257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAF 182 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~ 182 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++. +. +..+|
T Consensus 88 d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~I 160 (283)
T 3v8b_A 88 DEL------QMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-GGGAI 160 (283)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCceE
Confidence 976 4555544 79999999997432 23456789999999999998884 33 56799
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH-HHHHhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML-VGIATG 255 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~-~~~~~~ 255 (303)
|++||..+... .+......|..+|...+.+.+.++..+ . +.+.||++.+........ ......
T Consensus 161 v~isS~~~~~~----------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~ 230 (283)
T 3v8b_A 161 VVVSSINGTRT----------FTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETA 230 (283)
T ss_dssp EEECCSBTTTB----------CCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHS
T ss_pred EEEcChhhccC----------CCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhh
Confidence 99999865421 122345678888888888877665443 2 788899876544321100 000000
Q ss_pred hhhhccCCCCcc--ccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTV--TDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~--~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....+...... ..+...+|+|+++++++...+
T Consensus 231 ~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a 265 (283)
T 3v8b_A 231 IPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERA 265 (283)
T ss_dssp CCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGG
T ss_pred hhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccc
Confidence 000111111111 346789999999999987654
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3e-18 Score=146.68 Aligned_cols=188 Identities=9% Similarity=-0.007 Sum_probs=134.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
..++|+++||||+|+||+++++.|+++|++ |++++|++.... ....++.+|+
T Consensus 4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~~-------------------------~~~~~~~~D~ 55 (241)
T 1dhr_A 4 SGEARRVLVYGGRGALGSRCVQAFRARNWW---VASIDVVENEEA-------------------------SASVIVKMTD 55 (241)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHTTTCE---EEEEESSCCTTS-------------------------SEEEECCCCS
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHhCCCE---EEEEeCChhhcc-------------------------CCcEEEEcCC
Confidence 345789999999999999999999999987 889999764211 2456788999
Q ss_pred CCCCCCCCHHHHHHHhc---------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceE
Q psy17679 121 SLPGLGLSETDRATLVK---------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~---------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~ 182 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ....+|
T Consensus 56 ~~~~------~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~i 129 (241)
T 1dhr_A 56 SFTE------QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLL 129 (241)
T ss_dssp CHHH------HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEE
Confidence 9866 4554443 79999999997431 2335678899999999999998764 112599
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC------c--EEeecceecCccChHHHHHHHHh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR------V--HISGTGWIDNVYGPIGMLVGIAT 254 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~------~--~ii~pg~~~~~~g~~~~~~~~~~ 254 (303)
|++||..+.. +......|..+|...+.+.+.+...+ . +.++||++.+.... ....
T Consensus 130 v~isS~~~~~------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~-----~~~~ 192 (241)
T 1dhr_A 130 TLAGAKAALD------------GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR-----KSMP 192 (241)
T ss_dssp EEECCGGGGS------------CCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH-----HHST
T ss_pred EEECCHHHcc------------CCCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccc-----ccCc
Confidence 9999996653 22345678888888888888775442 2 68889876543211 1100
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+++.+|+|++++.++....
T Consensus 193 ---------~~~~~~~~~~~~vA~~v~~l~~~~~ 217 (241)
T 1dhr_A 193 ---------EADFSSWTPLEFLVETFHDWITGNK 217 (241)
T ss_dssp ---------TSCGGGSEEHHHHHHHHHHHHTTTT
T ss_pred ---------chhhccCCCHHHHHHHHHHHhcCCC
Confidence 1122346889999999999987543
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=153.74 Aligned_cols=204 Identities=16% Similarity=0.139 Sum_probs=137.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+|+||||+|+||+++++.|++.|++ |++++|+.... .+..+++... ...++.++.+|+
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~---V~~~~r~~~~~--~~~~~~l~~~------------~~~~~~~~~~Dl 85 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQ---CVIASRKMDVL--KATAEQISSQ------------TGNKVHAIQCDV 85 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHH------------HSSCEEEEECCT
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHHh------------cCCceEEEEeCC
Confidence 367799999999999999999999999987 88999974311 1111111110 025788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~ 182 (303)
++.+ ++..+++ ++|+||||||.... ...+...+++|+.++.++++++.+. ++..+|
T Consensus 86 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~i 159 (302)
T 1w6u_A 86 RDPD------MVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAF 159 (302)
T ss_dssp TCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 9876 5555554 56999999996432 2345678899999999998877542 245799
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCc-c-C---hHHHH-H
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNV-Y-G---PIGML-V 250 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~-~-g---~~~~~-~ 250 (303)
|++||.++... ..+...|..+|...+.+.+.+... .. ++++||++.+. . . +.... .
T Consensus 160 v~isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~ 227 (302)
T 1w6u_A 160 LSITTIYAETG------------SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEK 227 (302)
T ss_dssp EEECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHH
T ss_pred EEEcccccccC------------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHH
Confidence 99999966432 224556788888888888776544 22 78889876432 1 1 00000 0
Q ss_pred HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 251 GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+.. ......+++++|+|++++.++..+.
T Consensus 228 ~~~~---------~~p~~~~~~~~dva~~~~~l~~~~~ 256 (302)
T 1w6u_A 228 EMIG---------RIPCGRLGTVEELANLAAFLCSDYA 256 (302)
T ss_dssp HHHT---------TCTTSSCBCHHHHHHHHHHHTSGGG
T ss_pred HHHh---------cCCcCCCCCHHHHHHHHHHHcCCcc
Confidence 1111 1112347899999999999987543
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.8e-18 Score=148.53 Aligned_cols=213 Identities=15% Similarity=0.081 Sum_probs=135.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|++ |++++|+... .+.+.+.+.. .. ...++.++.+|++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~--------~~--~~~~~~~~~~D~~ 68 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGAR---LLLFSRNREK---LEAAASRIAS--------LV--SGAQVDIVAGDIR 68 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHH--------HS--TTCCEEEEECCTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh--------cC--CCCeEEEEEccCC
Confidence 56789999999999999999999999987 8899996421 1111111110 00 0137889999999
Q ss_pred CCCCCCCHHHHHHHhc------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEE
Q psy17679 122 LPGLGLSETDRATLVK------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHV 185 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~i 185 (303)
|.+ ++..+++ ++|+||||||.... ...+...+++|+.++..+.+.+.+. ++..+||++
T Consensus 69 ~~~------~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~i 142 (260)
T 2z1n_A 69 EPG------DIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYI 142 (260)
T ss_dssp CHH------HHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 976 5666655 49999999996432 2345778999999997777666432 156899999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHH-----HHHh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLV-----GIAT 254 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~-----~~~~ 254 (303)
||..+... ......|..+|...+.+.+.+...+ . ++++||++.+......... ....
T Consensus 143 sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 210 (260)
T 2z1n_A 143 GSVTLLRP------------WQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITV 210 (260)
T ss_dssp CCGGGTSC------------CTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC--------------
T ss_pred CchhhcCC------------CCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcH
Confidence 99966532 2234567777877777776654432 2 7888997754332210000 0000
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+........+.+++|+|++++.++..+.
T Consensus 211 ~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~ 244 (260)
T 2z1n_A 211 EEALKSMASRIPMGRVGKPEELASVVAFLASEKA 244 (260)
T ss_dssp ---------CCTTSSCCCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccc
Confidence 0000001011112347899999999999987653
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=151.69 Aligned_cols=195 Identities=16% Similarity=0.122 Sum_probs=136.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHH-HHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++|+|+||||+|+||+++++.|++.|+. |++++|+... .+.+ +++.. ...++.++.+|+
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~---V~~~~r~~~~---~~~~~~~l~~-------------~~~~~~~~~~Dl 89 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSK---LVLWDINKHG---LEETAAKCKG-------------LGAKVHTFVVDC 89 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHH-------------TTCCEEEEECCT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEEcCHHH---HHHHHHHHHh-------------cCCeEEEEEeeC
Confidence 67799999999999999999999999987 8899996421 1111 11111 025788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++..+++ ++|+||||||.... ...+...+++|+.++..+++.+.+. .+..+||
T Consensus 90 ~~~~------~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv 163 (272)
T 1yb1_A 90 SNRE------DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIV 163 (272)
T ss_dssp TCHH------HHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEE
Confidence 9876 4555544 78999999997542 2234678899999988877776532 2678999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC-------c--EEeecceecCccChHHHHHHHHh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR-------V--HISGTGWIDNVYGPIGMLVGIAT 254 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~-------~--~ii~pg~~~~~~g~~~~~~~~~~ 254 (303)
++||..+.. +......|..+|...+.+.+.+...+ . ++++||++.+.....
T Consensus 164 ~isS~~~~~------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-------- 223 (272)
T 1yb1_A 164 TVASAAGHV------------SVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-------- 223 (272)
T ss_dssp EECCCC-CC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC--------
T ss_pred EEechhhcC------------CCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc--------
Confidence 999996542 23356678888888888887664432 2 788898664332110
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.. .....+++++|+|++++.++..+..
T Consensus 224 -~~-------~~~~~~~~~~dva~~i~~~~~~~~~ 250 (272)
T 1yb1_A 224 -PS-------TSLGPTLEPEEVVNRLMHGILTEQK 250 (272)
T ss_dssp -TH-------HHHCCCCCHHHHHHHHHHHHHTTCS
T ss_pred -cc-------ccccCCCCHHHHHHHHHHHHHcCCC
Confidence 00 0123478999999999999987654
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.7e-19 Score=151.14 Aligned_cols=201 Identities=10% Similarity=0.080 Sum_probs=128.8
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEE-eCCCCcccHHHHH-HHHHHhHHHhhhhccCcCcCCceEE-EEecC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLL-VRPKKGKDIQERL-DAIFEDRLFWRLRAEVPDFRSKVSA-VAGDC 120 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~-~R~~~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~v~~-~~~Dl 120 (303)
+|+|+||||+|+||+++++.|+++|++ |+++ .|+... .+.+ +++... ..++.+ +.+|+
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~---v~~~~~r~~~~---~~~~~~~~~~~-------------~~~~~~~~~~D~ 61 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFA---LAIHYGQNREK---AEEVAEEARRR-------------GSPLVAVLGANL 61 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCE---EEEEESSCHHH---HHHHHHHHHHT-------------TCSCEEEEECCT
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHHH---HHHHHHHHHhc-------------CCceEEEEeccC
Confidence 478999999999999999999999987 7777 675321 1111 111110 135666 89999
Q ss_pred CCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHH----HhcCCCceE
Q psy17679 121 SLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLA----REMKDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a----~~~~~~~r~ 182 (303)
++.+ ++..++ .++|+|||+||.... ...+...+++|+.++.++++.+ .+. +.++|
T Consensus 62 ~~~~------~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~i 134 (245)
T 2ph3_A 62 LEAE------AATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-RFGRI 134 (245)
T ss_dssp TSHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-CCCEE
Confidence 9876 455554 379999999997532 2345678899999966665554 444 67899
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGV 256 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~ 256 (303)
|++||..+... ......|..+|...+.+.+.+...+ . ++++||++.+..... .........
T Consensus 135 v~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~ 201 (245)
T 2ph3_A 135 VNITSVVGILG------------NPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER-LPQEVKEAY 201 (245)
T ss_dssp EEECCTHHHHC------------CSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHH
T ss_pred EEEeChhhccC------------CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh-cCHHHHHHH
Confidence 99999854321 1134567788887777776654332 2 788898664322110 000000000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
... .....+++++|+|++++.++..+.
T Consensus 202 ~~~-----~~~~~~~~~~dva~~~~~l~~~~~ 228 (245)
T 2ph3_A 202 LKQ-----IPAGRFGRPEEVAEAVAFLVSEKA 228 (245)
T ss_dssp HHT-----CTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred Hhc-----CCCCCCcCHHHHHHHHHHHhCccc
Confidence 000 112357899999999999987643
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=150.87 Aligned_cols=207 Identities=15% Similarity=0.113 Sum_probs=132.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEE-eCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLL-VRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~-~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++|+||||||+|+||++++++|++.|+. |+++ .|+.. ..+.+.+... ....++.++.+|+
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~---V~~~~~~~~~---~~~~~~~~~~------------~~~~~~~~~~~Dl 85 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWR---VGVNYAANRE---AADAVVAAIT------------ESGGEAVAIPGDV 85 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHH---HHHHHHHHHH------------HTTCEEEEEECCT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCChh---HHHHHHHHHH------------hcCCcEEEEEcCC
Confidence 45689999999999999999999999987 6665 45422 1122211111 0125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc------CCC
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM------KDL 179 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~------~~~ 179 (303)
+|.+ ++..+++ ++|+||||||.... ...+...+++|+.++..+++++.+. ++.
T Consensus 86 ~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~ 159 (272)
T 4e3z_A 86 GNAA------DIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQG 159 (272)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC
T ss_pred CCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCC
Confidence 9976 5555544 78999999997542 2345678999999999998887654 135
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIA 253 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~ 253 (303)
.+||++||..+.... ...+..|..+|...+.+.+.+...+ . +.++||++.+............
T Consensus 160 g~iv~isS~~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~ 228 (272)
T 4e3z_A 160 GAIVNVSSMAAILGS-----------ATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRA 228 (272)
T ss_dssp EEEEEECCTHHHHCC-----------TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------
T ss_pred CEEEEEcchHhccCC-----------CCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHH
Confidence 689999999553211 1134557788888888777665443 2 7888987754432211111100
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. . .........+.+++|+|++++.++....
T Consensus 229 ~----~-~~~~~~~~~~~~~edvA~~i~~l~s~~~ 258 (272)
T 4e3z_A 229 R----E-MAPSVPMQRAGMPEEVADAILYLLSPSA 258 (272)
T ss_dssp ----------CCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred H----H-HhhcCCcCCCcCHHHHHHHHHHHhCCcc
Confidence 0 1 1111222346789999999999987554
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.78 E-value=8.3e-19 Score=153.39 Aligned_cols=207 Identities=14% Similarity=0.076 Sum_probs=138.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|++.|+. |++++|+.. .++++... ...++.++.+|+
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dv 84 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCH---VLCADIDGD------AADAAATK------------IGCGAAACRVDV 84 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCE---EEEEESSHH------HHHHHHHH------------HCSSCEEEECCT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH------------cCCcceEEEecC
Confidence 367899999999999999999999999987 889998642 22221111 025788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ++..+||
T Consensus 85 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv 158 (277)
T 3gvc_A 85 SDEQ------QIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIV 158 (277)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9976 4555444 78999999998542 2345778999999999998887653 2567899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH--H-HHHh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML--V-GIAT 254 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~--~-~~~~ 254 (303)
++||..+.. +......|..+|...+.+.+.++..+ . +.++||++.+........ . ....
T Consensus 159 ~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~ 226 (277)
T 3gvc_A 159 NLSSLAGQV------------AVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGA 226 (277)
T ss_dssp EECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------
T ss_pred EEcchhhcc------------CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHH
Confidence 999996653 23345678888888888877654432 2 788898764432111000 0 0000
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....... ......+.+++|+|++++.++....
T Consensus 227 ~~~~~~~--~~~~~r~~~pedvA~~v~~L~s~~a 258 (277)
T 3gvc_A 227 GGARSMI--ARLQGRMAAPEEMAGIVVFLLSDDA 258 (277)
T ss_dssp CCHHHHH--HHHHSSCBCHHHHHHHHHHHHSGGG
T ss_pred Hhhhhhh--hccccCCCCHHHHHHHHHHHcCCcc
Confidence 0000000 0011347899999999999997654
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=9.9e-19 Score=150.85 Aligned_cols=205 Identities=8% Similarity=-0.069 Sum_probs=132.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+|+||||+|+||+++++.|+++|++ |++++|+..... . .+.+|+++.
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~~~~~-------------------------~---~~~~Dl~~~ 49 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQ---IVGIDIRDAEVI-------------------------A---DLSTAEGRK 49 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSSSSEE-------------------------C---CTTSHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCchhhc-------------------------c---ccccCCCCH
Confidence 368999999999999999999999987 889999754211 1 156788876
Q ss_pred CCCCCHHHHHHHhc----cccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCCcccCCCC-
Q psy17679 124 GLGLSETDRATLVK----QVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTAFTHCPRE- 195 (303)
Q Consensus 124 ~~~~~~~~~~~~~~----~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~~~~~~~~- 195 (303)
+ ++..+++ ++|+||||||.......++..+++|+.++.++++++.+. ++..|||++||..+.....
T Consensus 50 ~------~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 123 (257)
T 1fjh_A 50 Q------AIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFD 123 (257)
T ss_dssp H------HHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGG
T ss_pred H------HHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccc
Confidence 5 5666664 569999999986534568899999999999999888642 2568999999996652110
Q ss_pred -cccc-----CC---------CCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHh
Q psy17679 196 -RIDE-----EF---------YPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIAT 254 (303)
Q Consensus 196 -~~~E-----~~---------~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~ 254 (303)
+..+ .+ ...+......|..+|...+.+.+.+...+ . ++++||++.+.............
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~ 203 (257)
T 1fjh_A 124 KNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYG 203 (257)
T ss_dssp GCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------
T ss_pred cchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHH
Confidence 0000 00 00233456788999999998888765442 2 78889976544321110000000
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..... + ......+++++|+|++++.++..+.
T Consensus 204 ~~~~~-~--~~~~~~~~~~~dvA~~~~~l~~~~~ 234 (257)
T 1fjh_A 204 ESIAK-F--VPPMGRRAEPSEMASVIAFLMSPAA 234 (257)
T ss_dssp ------C--CCSTTSCCCTHHHHHHHHHHTSGGG
T ss_pred HHHHh-c--ccccCCCCCHHHHHHHHHHHhCchh
Confidence 00000 0 0111247899999999999987653
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.8e-18 Score=148.94 Aligned_cols=208 Identities=12% Similarity=0.062 Sum_probs=138.6
Q ss_pred ccCCcEEEEeCCcc-hhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 41 FYRDKTIFLTGGTG-FMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 41 ~~~~~~vlItGatG-~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
.+++|+++||||+| .||++++++|+++|+. |++++|+... +++.... +.. ....++.++.+|
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~---V~~~~r~~~~------~~~~~~~-----l~~---~~~~~~~~~~~D 81 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGAD---VVISDYHERR------LGETRDQ-----LAD---LGLGRVEAVVCD 81 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCE---EEEEESCHHH------HHHHHHH-----HHT---TCSSCEEEEECC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCE---EEEecCCHHH------HHHHHHH-----HHh---cCCCceEEEEeC
Confidence 36789999999998 6999999999999987 8899997432 1111110 111 112589999999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCce
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKA 181 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r 181 (303)
++|.+ ++..+++ ++|+||||||.... ...+...+++|+.++.++++++.+. ++..+
T Consensus 82 l~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 155 (266)
T 3o38_A 82 VTSTE------AVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGV 155 (266)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEE
T ss_pred CCCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeE
Confidence 99976 5555554 68999999997542 2345678899999999999888654 24568
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhh
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATG 255 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~ 255 (303)
||++||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+.+...... .
T Consensus 156 iv~~sS~~~~~------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----~ 218 (266)
T 3o38_A 156 IVNNASVLGWR------------AQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS-----S 218 (266)
T ss_dssp EEEECCGGGTC------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------
T ss_pred EEEeCCHHHcC------------CCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc-----H
Confidence 99999997653 22345678888888888887665442 2 678898775443221111 1
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....+........+++++|+|+++++++....
T Consensus 219 ~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~ 251 (266)
T 3o38_A 219 ELLDRLASDEAFGRAAEPWEVAATIAFLASDYS 251 (266)
T ss_dssp --------CCTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccc
Confidence 111111122233457899999999999988654
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=7.1e-18 Score=148.92 Aligned_cols=212 Identities=14% Similarity=0.113 Sum_probs=137.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|+. |++++|+.... .+..+++...+ ....++.++.+|++
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~---V~~~~r~~~~~--~~~~~~l~~~~----------~~~~~~~~~~~Dv~ 88 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQ---VTITGRNEDRL--EETKQQILKAG----------VPAEKINAVVADVT 88 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHTT----------CCGGGEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHhcC----------CCCceEEEEecCCC
Confidence 56789999999999999999999999987 88999964211 11111111100 00026889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc---------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF---------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAF 182 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~---------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~ 182 (303)
|.+ ++..+++ ++|+||||||.... ...+...+++|+.++..+++++.+. .+ .+|
T Consensus 89 d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~I 161 (297)
T 1xhl_A 89 EAS------GQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEI 161 (297)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEE
Confidence 976 5555554 78999999996432 1235678999999999998888653 13 799
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHH---HHHHH-
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIG---MLVGI- 252 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~---~~~~~- 252 (303)
|++||..+.... ......|..+|...+.+.+.+... .. ++++||++.+...... .....
T Consensus 162 V~isS~~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~ 230 (297)
T 1xhl_A 162 VNVSSIVAGPQA-----------HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDK 230 (297)
T ss_dssp EEECCGGGSSSC-----------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHH
T ss_pred EEEcCchhccCC-----------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccc
Confidence 999999654321 023456888888888877766432 22 7888997754431110 00000
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
....... +........+..++|+|+++++++..+
T Consensus 231 ~~~~~~~-~~~~~p~~r~~~pedvA~~v~~l~s~~ 264 (297)
T 1xhl_A 231 LYSFIGS-RKECIPVGHCGKPEEIANIIVFLADRN 264 (297)
T ss_dssp HHHHHHH-CTTTCTTSSCBCHHHHHHHHHHHHCHH
T ss_pred hHHHHHH-HHhcCCCCCCcCHHHHHHHHHHHhCCc
Confidence 0000001 111111234789999999999998765
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.5e-18 Score=148.88 Aligned_cols=208 Identities=9% Similarity=0.039 Sum_probs=134.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|+++|+. |+++.+..... ..+..+++.. ...++.++.+|+
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~---V~~~~~~~~~~-~~~~~~~~~~-------------~~~~~~~~~~Dv 67 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGAN---VVLTYNGAAEG-AATAVAEIEK-------------LGRSALAIKADL 67 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECSSCHH-HHHHHHHHHT-------------TTSCCEEEECCT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCCHHH-HHHHHHHHHh-------------cCCceEEEEcCC
Confidence 367899999999999999999999999987 77775543321 1111122211 125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhcCCC--ceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREMKDL--KAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~~~~--~r~i 183 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. .. .+||
T Consensus 68 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~-~~~~g~iv 140 (259)
T 3edm_A 68 TNAA------EVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPK-MAKGGAIV 140 (259)
T ss_dssp TCHH------HHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGG-EEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCEEE
Confidence 9976 5555554 78999999986521 2345778999999999999999876 32 4899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
++||..+... +......|..+|...+.+.+.++..+ . +.+.||++.+.+..... .....
T Consensus 141 ~isS~~~~~~-----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~-----~~~~~ 204 (259)
T 3edm_A 141 TFSSQAGRDG-----------GGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFT-----KPEVR 204 (259)
T ss_dssp EECCHHHHHC-----------CSTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-----------------
T ss_pred EEcCHHhccC-----------CCCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccccccc-----ChHHH
Confidence 9999965411 22244567778887777776554332 3 67889977554321110 01111
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+........+.+++|+|+++++++....
T Consensus 205 ~~~~~~~p~~r~~~pedva~~v~~L~s~~~ 234 (259)
T 3edm_A 205 ERVAGATSLKREGSSEDVAGLVAFLASDDA 234 (259)
T ss_dssp ----------CCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 111111223456799999999999987654
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=152.50 Aligned_cols=204 Identities=12% Similarity=0.095 Sum_probs=140.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|++.|+. |++++|+.. .++++... +. ....++.++.+|++
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~---V~~~~r~~~------~~~~~~~~-----~~----~~~~~~~~~~~Dv~ 67 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAK---VVVTARNGN------ALAELTDE-----IA----GGGGEAAALAGDVG 67 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEECCSCHH------HHHHHHHH-----HT----TTTCCEEECCCCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-----HH----hcCCcEEEEECCCC
Confidence 67899999999999999999999999987 888898743 22222111 00 11257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. .+..+||
T Consensus 68 ~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv 141 (280)
T 3tox_A 68 DEA------LHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLT 141 (280)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEE
Confidence 976 5555554 79999999996521 2345778999999999998887653 2456999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH------HHHHH
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI------GMLVG 251 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~------~~~~~ 251 (303)
++||..+... +......|..+|...+.+.+.++..+ . +.+.||.+.+..... .....
T Consensus 142 ~isS~~~~~~-----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~ 210 (280)
T 3tox_A 142 FTSSFVGHTA-----------GFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRG 210 (280)
T ss_dssp EECCSBTTTB-----------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHH
T ss_pred EEcChhhCcC-----------CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHH
Confidence 9999865421 22345667888888888777665443 2 788899775543211 01111
Q ss_pred HHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 252 IATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
... .......+.+++|+|+++++++.+..
T Consensus 211 ~~~--------~~~p~~r~~~pedvA~~v~~L~s~~a 239 (280)
T 3tox_A 211 FVE--------GLHALKRIARPEEIAEAALYLASDGA 239 (280)
T ss_dssp HHH--------TTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHh--------ccCccCCCcCHHHHHHHHHHHhCccc
Confidence 111 11122347899999999999998654
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.9e-18 Score=149.20 Aligned_cols=212 Identities=11% Similarity=0.119 Sum_probs=137.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|+. |++++|+.. .++++... +... .....++.++.+|++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----~~~~-~~~~~~~~~~~~Dv~ 68 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGAN---VTITGRSSE------RLEETRQI-----ILKS-GVSEKQVNSVVADVT 68 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----HHTT-TCCGGGEEEEECCTT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-----HHHc-CCCCcceEEEEecCC
Confidence 56789999999999999999999999987 889999742 12211110 0000 000027889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc---CCCc
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM---KDLK 180 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~ 180 (303)
|.+ ++..+++ ++|+||||||.... ...+...+++|+.++.++++++.+. ++ .
T Consensus 69 ~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g 141 (280)
T 1xkq_A 69 TED------GQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-G 141 (280)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-C
Confidence 976 5555544 68999999997532 1235678899999999998888653 13 7
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHH-HH--H
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGM-LV--G 251 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~-~~--~ 251 (303)
+||++||..+.... ......|..+|...+.+.+.+... .. ++++||++.+....... .. .
T Consensus 142 ~iv~isS~~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~ 210 (280)
T 1xkq_A 142 EIVNVSSIVAGPQA-----------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQAS 210 (280)
T ss_dssp EEEEECCGGGSSSC-----------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHH
T ss_pred cEEEecCccccCCC-----------CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccc
Confidence 99999999654321 023456788888888887766532 22 78889977544321100 00 0
Q ss_pred -HHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 252 -IATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 252 -~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
........ +........+.+++|+|+++++++..+
T Consensus 211 ~~~~~~~~~-~~~~~p~~~~~~pedvA~~v~~l~s~~ 246 (280)
T 1xkq_A 211 QKFYNFMAS-HKECIPIGAAGKPEHIANIILFLADRN 246 (280)
T ss_dssp HHHHHHHHH-CTTTCTTSSCBCHHHHHHHHHHHHCHH
T ss_pred cchHHHHHH-HHcCCCCCCCCCHHHHHHHHHHhcCcc
Confidence 00000001 111111234789999999999998754
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-18 Score=151.65 Aligned_cols=206 Identities=15% Similarity=0.178 Sum_probs=134.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+|+||||+|+||+++++.|++.|+. |+++.|+.. .++++... +. ....++.++.+|+
T Consensus 41 ~l~~k~vlITGasggIG~~la~~L~~~G~~---V~~~~r~~~------~~~~~~~~-----l~----~~~~~~~~~~~Dl 102 (285)
T 2c07_A 41 CGENKVALVTGAGRGIGREIAKMLAKSVSH---VICISRTQK------SCDSVVDE-----IK----SFGYESSGYAGDV 102 (285)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSSE---EEEEESSHH------HHHHHHHH-----HH----TTTCCEEEEECCT
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHcCCE---EEEEcCCHH------HHHHHHHH-----HH----hcCCceeEEECCC
Confidence 466789999999999999999999999987 888887632 11111110 00 0125788999999
Q ss_pred CCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++..++ .++|+||||||.... ...+...+++|+.++.++++++.+. .+..+||
T Consensus 103 ~d~~------~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv 176 (285)
T 2c07_A 103 SKKE------EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRII 176 (285)
T ss_dssp TCHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEE
Confidence 9876 555555 368999999997532 2345678899999988887777532 1568999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+... ......|..+|...+.+.+.+...+ . ++++||++.+..... ..........
T Consensus 177 ~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~ 243 (285)
T 2c07_A 177 NISSIVGLTG------------NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNII 243 (285)
T ss_dssp EECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHH
T ss_pred EECChhhccC------------CCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh-cCHHHHHHHH
Confidence 9999954321 1234567788887777776654332 2 788899775433211 0000111100
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. .....+++++|+|++++.++..+.
T Consensus 244 ~~-----~~~~~~~~~~dvA~~~~~l~~~~~ 269 (285)
T 2c07_A 244 SN-----IPAGRMGTPEEVANLACFLSSDKS 269 (285)
T ss_dssp TT-----CTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred hh-----CCCCCCCCHHHHHHHHHHHhCCCc
Confidence 01 111247899999999999987654
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.78 E-value=9e-18 Score=147.35 Aligned_cols=201 Identities=13% Similarity=0.140 Sum_probs=139.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc-----cHHHHHHHHHHhHHHhhhhccCcCcCCceEEE
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK-----DIQERLDAIFEDRLFWRLRAEVPDFRSKVSAV 116 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~-----~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~ 116 (303)
+++|+++||||+|+||+++++.|+++|+. |++++|+.... ...+..+++... ..++.++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 70 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGAN---VALVAKSAEPHPKLPGTIYTAAKEIEEA-------------GGQALPI 70 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCE---EEEEESCCSCCSSSCCCHHHHHHHHHHH-------------TSEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECChhhhhhhhHHHHHHHHHHHhc-------------CCcEEEE
Confidence 56799999999999999999999999987 99999986532 112222222111 2578899
Q ss_pred EecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCC
Q psy17679 117 AGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDL 179 (303)
Q Consensus 117 ~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~ 179 (303)
.+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ++.
T Consensus 71 ~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 144 (285)
T 3sc4_A 71 VGDIRDGD------AVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDN 144 (285)
T ss_dssp ECCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSS
T ss_pred ECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 99999976 5555554 79999999997532 2345678899999999999988765 245
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecce-ecCccChHHHHHHH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGW-IDNVYGPIGMLVGI 252 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~-~~~~~g~~~~~~~~ 252 (303)
.+||++||..+.... ......|..+|...+.+.+.++..+. +.+.||+ +.+.. ....
T Consensus 145 g~iv~isS~~~~~~~-----------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~-----~~~~ 208 (285)
T 3sc4_A 145 PHILTLSPPIRLEPK-----------WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAA-----VQNL 208 (285)
T ss_dssp CEEEECCCCCCCSGG-----------GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHH-----HHHH
T ss_pred cEEEEECChhhccCC-----------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHH-----HHhh
Confidence 699999998554211 12336677888888887776654432 6788984 32221 1111
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
... ......+...+|+|+++++++..+.
T Consensus 209 ~~~--------~~~~~r~~~pedvA~~~~~l~s~~~ 236 (285)
T 3sc4_A 209 LGG--------DEAMARSRKPEVYADAAYVVLNKPS 236 (285)
T ss_dssp HTS--------CCCCTTCBCTHHHHHHHHHHHTSCT
T ss_pred ccc--------cccccCCCCHHHHHHHHHHHhCCcc
Confidence 111 1112346789999999999998765
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=8.4e-18 Score=144.29 Aligned_cols=196 Identities=13% Similarity=0.068 Sum_probs=133.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|++ |++++|+.. .++++... .++.++.+|++
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~~--------------~~~~~~~~D~~ 59 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGAR---LVACDIEEG------PLREAAEA--------------VGAHPVVMDVA 59 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHT--------------TTCEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH--------------cCCEEEEecCC
Confidence 46789999999999999999999999987 889998632 22222111 13778999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ++..+||+
T Consensus 60 ~~~------~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~ 133 (245)
T 1uls_A 60 DPA------SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVL 133 (245)
T ss_dssp CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 876 5555544 58999999997532 2345678899999999998887653 25679999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChH---HHHHHHHhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPI---GMLVGIATG 255 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~---~~~~~~~~~ 255 (303)
+||.. ... ......|..+|...+.+.+.+... .. ++++||++.+..... ........
T Consensus 134 isS~~-~~~------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~- 199 (245)
T 1uls_A 134 TASRV-YLG------------NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIA- 199 (245)
T ss_dssp ECCGG-GGC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHH-
T ss_pred Eccch-hcC------------CCCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHh-
Confidence 99986 321 123456777777777766655433 22 788899875543211 11111111
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+ ...+++.+|+|++++.++..+.
T Consensus 200 ---~~p-----~~~~~~~~dvA~~v~~l~s~~~ 224 (245)
T 1uls_A 200 ---ATP-----LGRAGKPLEVAYAALFLLSDES 224 (245)
T ss_dssp ---TCT-----TCSCBCHHHHHHHHHHHHSGGG
T ss_pred ---hCC-----CCCCcCHHHHHHHHHHHhCchh
Confidence 111 1136899999999999987653
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-18 Score=151.13 Aligned_cols=208 Identities=14% Similarity=0.142 Sum_probs=138.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|+++|+. |++++|+.... .+..+++... ...++.++.+|+
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~~------------~~~~~~~~~~Dv 86 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCH---TVIASRSLPRV--LTAARKLAGA------------TGRRCLPLSMDV 86 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCE---EEEEESCHHHH--HHHHHHHHHH------------HSSCEEEEECCT
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHHh------------cCCcEEEEEcCC
Confidence 467899999999999999999999999987 88999974321 1122222110 125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. .+..+||
T Consensus 87 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv 160 (277)
T 4fc7_A 87 RAPP------AVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIV 160 (277)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEE
Confidence 9976 4555544 78999999996432 2346778999999999999888542 1457999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH--HHHHhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML--VGIATG 255 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~--~~~~~~ 255 (303)
++||..+... ......|..+|...+.+.+.+...+ . +.+.||++.+......+. ......
T Consensus 161 ~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~ 228 (277)
T 4fc7_A 161 NITATLGNRG------------QALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLST 228 (277)
T ss_dssp EECCSHHHHT------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHH
T ss_pred EECchhhCCC------------CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHH
Confidence 9999965421 2234567777877777777665443 2 788899765432111000 000000
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
... ......+...+|+|+++++++....
T Consensus 229 ~~~-----~~p~~r~~~p~dvA~~v~fL~s~~~ 256 (277)
T 4fc7_A 229 KVT-----ASPLQRLGNKTEIAHSVLYLASPLA 256 (277)
T ss_dssp HHH-----TSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred Hhc-----cCCCCCCcCHHHHHHHHHHHcCCcc
Confidence 000 1112346799999999999997544
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=6.9e-18 Score=145.20 Aligned_cols=203 Identities=14% Similarity=0.110 Sum_probs=129.9
Q ss_pred CccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEE
Q psy17679 36 TPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSA 115 (303)
Q Consensus 36 ~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~ 115 (303)
......+++|+|+||||+|+||+++++.|+++|++ |++++|+. +.++++ ..+.+
T Consensus 11 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~------~~~~~~-----------------~~~~~ 64 (249)
T 1o5i_A 11 HHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAE---VTICARNE------ELLKRS-----------------GHRYV 64 (249)
T ss_dssp -----CCTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHT-----------------CSEEE
T ss_pred hhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEcCCH------HHHHhh-----------------CCeEE
Confidence 44555678899999999999999999999999987 88999964 111110 24566
Q ss_pred EEecCCCCCCCCCHHHHHHHhccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHH----HhcCCCceEEE
Q psy17679 116 VAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLA----REMKDLKAFVH 184 (303)
Q Consensus 116 ~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a----~~~~~~~r~i~ 184 (303)
+ +|+ ..+ ...+...+.++|+||||||.... ...+...+++|+.++..+.+.+ .+. +..+||+
T Consensus 65 ~-~D~-~~~----~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~ 137 (249)
T 1o5i_A 65 V-CDL-RKD----LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVA 137 (249)
T ss_dssp E-CCT-TTC----HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred E-eeH-HHH----HHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEE
Confidence 6 998 222 22333333489999999997532 2345678899999987665554 344 6689999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+... ......|..+|...+.+.+.+... .. ++++||++.+..... ..........
T Consensus 138 isS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~- 203 (249)
T 1o5i_A 138 ITSFSVISP------------IENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE-LLSEEKKKQV- 203 (249)
T ss_dssp ECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH-HSCHHHHHHH-
T ss_pred EcchHhcCC------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc-cchhhHHHHH-
Confidence 999966532 223456777788777777665433 22 788899775543211 0000000000
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. .......+++++|+|++++.++..+.
T Consensus 204 --~-~~~p~~~~~~~~dvA~~i~~l~s~~~ 230 (249)
T 1o5i_A 204 --E-SQIPMRRMAKPEEIASVVAFLCSEKA 230 (249)
T ss_dssp --H-TTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred --H-hcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 0 01112347899999999999987653
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.78 E-value=6.1e-18 Score=145.76 Aligned_cols=199 Identities=12% Similarity=0.076 Sum_probs=136.4
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|++.|+. |++++|+.... .+..+++... ...++.++.+|+
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~~------------~~~~~~~~~~D~ 71 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGAT---VILLGRNEEKL--RQVASHINEE------------TGRQPQWFILDL 71 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHH------------HSCCCEEEECCT
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHhh------------cCCCceEEEEec
Confidence 477899999999999999999999999987 88999974321 1111111111 013788999999
Q ss_pred --CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCc
Q psy17679 121 --SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLK 180 (303)
Q Consensus 121 --~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~ 180 (303)
++.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ++..
T Consensus 72 ~~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g 145 (252)
T 3f1l_A 72 LTCTSE------NCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAG 145 (252)
T ss_dssp TTCCHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSC
T ss_pred ccCCHH------HHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCC
Confidence 6544 4444443 78999999997421 2345678999999999999888532 2567
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecceecCccChHHHHHHHHhh
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGWIDNVYGPIGMLVGIATG 255 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~~~~~~g~~~~~~~~~~~ 255 (303)
+||++||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+.. ......
T Consensus 146 ~iv~isS~~~~~------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~-----~~~~~~- 207 (252)
T 3f1l_A 146 SLVFTSSSVGRQ------------GRANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM-----RASAFP- 207 (252)
T ss_dssp EEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH-----HHHHCT-
T ss_pred EEEEECChhhcc------------CCCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch-----hhhhCC-
Confidence 999999996643 22345567788888887777665443 2 677898764432 111111
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+...+|+|+++++++....
T Consensus 208 --------~~~~~~~~~p~dva~~~~~L~s~~~ 232 (252)
T 3f1l_A 208 --------TEDPQKLKTPADIMPLYLWLMGDDS 232 (252)
T ss_dssp --------TCCGGGSBCTGGGHHHHHHHHSGGG
T ss_pred --------ccchhccCCHHHHHHHHHHHcCccc
Confidence 1122346789999999999988654
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=2.3e-18 Score=148.58 Aligned_cols=204 Identities=11% Similarity=0.104 Sum_probs=134.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
..++|+||||||+|+||+++++.|++.|+. |+++++..... ..+.++++... ..++.++.+|+
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~---v~~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~~Dv 72 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFR---VVAGCGPNSPR-RVKWLEDQKAL-------------GFDFYASEGNV 72 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTTEE---EEEEECTTCSS-HHHHHHHHHHT-------------TCCCEEEECCT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCCHHH-HHHHHHHHHhc-------------CCeeEEEecCC
Confidence 467799999999999999999999999987 77777433221 12222222211 25788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. .+..+||
T Consensus 73 ~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv 146 (256)
T 3ezl_A 73 GDWD------STKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRII 146 (256)
T ss_dssp TCHH------HHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEE
Confidence 9976 5555554 78999999997542 2345678999999988887776432 2567999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccCh---HHHHHHHHh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGP---IGMLVGIAT 254 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~---~~~~~~~~~ 254 (303)
++||..+.. +......|..+|...+.+.+.+... .. +.+.||++.+.... ......+..
T Consensus 147 ~isS~~~~~------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~ 214 (256)
T 3ezl_A 147 NISSVNGQK------------GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVA 214 (256)
T ss_dssp EECCCCGGG------------SCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHH
T ss_pred EEcchhhcc------------CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHh
Confidence 999986543 2234566778888777777655443 22 77889876443211 111111111
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. ....+.+.+|+|+++++++....
T Consensus 215 ~~---------~~~~~~~~~dva~~~~~l~s~~~ 239 (256)
T 3ezl_A 215 TI---------PVRRLGSPDEIGSIVAWLASEES 239 (256)
T ss_dssp HS---------TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred cC---------CCCCCcCHHHHHHHHHHHhCCcc
Confidence 11 12346789999999999887543
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.6e-18 Score=148.53 Aligned_cols=204 Identities=12% Similarity=0.104 Sum_probs=135.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|++ |++++|+.. .++++... +. . ..++.++.+|++
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~~---V~~~~r~~~------~~~~~~~~-----l~----~-~~~~~~~~~Dv~ 87 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGAR---VFICARDAE------ACADTATR-----LS----A-YGDCQAIPADLS 87 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECSCHH------HHHHHHHH-----HT----T-SSCEEECCCCTT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-----HH----h-cCceEEEEeeCC
Confidence 56799999999999999999999999987 889998642 12211110 10 0 126888999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCC----c
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDL----K 180 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~----~ 180 (303)
|.+ ++..+++ ++|+||||||.... ...+...+++|+.++..+++++.+. .+. .
T Consensus 88 d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g 161 (276)
T 2b4q_A 88 SEA------GARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPA 161 (276)
T ss_dssp SHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCC
Confidence 876 4555544 78999999997532 2346788999999998887776532 133 7
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhh-HHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYEN-LIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIA 253 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~-~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~ 253 (303)
+||++||..+.... .... .|..+|...+.+.+.+...+ . ++++||++.+....... ....
T Consensus 162 ~iV~isS~~~~~~~------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~ 228 (276)
T 2b4q_A 162 RVINIGSVAGISAM------------GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIA-NDPQ 228 (276)
T ss_dssp EEEEECCGGGTCCC------------CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHH-HCHH
T ss_pred EEEEECCHHHcCCC------------CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcc-hhHH
Confidence 99999999665321 1122 57777887888777665432 2 78889987655432211 0000
Q ss_pred hhhhh--hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLH--THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~--~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..... .. ....+.+.+|+|+++++++..+.
T Consensus 229 ~~~~~~~~~-----p~~r~~~p~dvA~~v~~l~s~~~ 260 (276)
T 2b4q_A 229 ALEADSASI-----PMGRWGRPEEMAALAISLAGTAG 260 (276)
T ss_dssp HHHHHHHTS-----TTSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHhhcCC-----CCCCcCCHHHHHHHHHHHhCccc
Confidence 00000 11 11247899999999999987653
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=7.5e-18 Score=147.44 Aligned_cols=205 Identities=12% Similarity=0.103 Sum_probs=140.2
Q ss_pred ccCCcEEEEeCCcch--hHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGGTGF--MGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGatG~--iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+++|+|+||||+|+ ||+++++.|++.|+. |++++|+.. .+.++++... ..++.++.+
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~---V~~~~r~~~----~~~~~~l~~~-------------~~~~~~~~~ 82 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAE---LAFTYVGQF----KDRVEKLCAE-------------FNPAAVLPC 82 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCE---EEEEECTTC----HHHHHHHHGG-------------GCCSEEEEC
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCE---EEEeeCchH----HHHHHHHHHh-------------cCCceEEEe
Confidence 467899999999966 999999999999987 889999761 2333333221 146889999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc------------cccHHHHHhhhHHHHHHHHHHHHhc--C
Q psy17679 119 DCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF------------DEHIKMAVKINVCGVQAMLQLAREM--K 177 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~------------~~~~~~~~~~N~~~~~~ll~~a~~~--~ 177 (303)
|+++.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++... .
T Consensus 83 Dl~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 156 (280)
T 3nrc_A 83 DVISDQ------EIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKN 156 (280)
T ss_dssp CTTCHH------HHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred ecCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999976 5555554 57999999997532 2234678899999999999988764 1
Q ss_pred CCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH-HHH
Q psy17679 178 DLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG-MLV 250 (303)
Q Consensus 178 ~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~-~~~ 250 (303)
...+||++||..+.. +...+..|..+|...+.+.+.+...+ . +.+.||++.+...... ...
T Consensus 157 ~~g~iv~isS~~~~~------------~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~ 224 (280)
T 3nrc_A 157 RNASMVALTYIGAEK------------AMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFK 224 (280)
T ss_dssp TTCEEEEEECGGGTS------------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHH
T ss_pred CCCeEEEEecccccc------------CCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchH
Confidence 347999999996653 23356678888888888777654432 2 7888997765442210 001
Q ss_pred HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 251 GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.......... ....+..++|+|++++.++....
T Consensus 225 ~~~~~~~~~~-----p~~~~~~pedvA~~v~~l~s~~~ 257 (280)
T 3nrc_A 225 KMLDYNAMVS-----PLKKNVDIMEVGNTVAFLCSDMA 257 (280)
T ss_dssp HHHHHHHHHS-----TTCSCCCHHHHHHHHHHTTSGGG
T ss_pred HHHHHHHhcC-----CCCCCCCHHHHHHHHHHHhCccc
Confidence 1111111111 11236789999999999887553
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-17 Score=142.66 Aligned_cols=197 Identities=9% Similarity=0.047 Sum_probs=133.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+++||||+|+||+++++.|+++|++ |++++|+... ..+ + .++.++.+|+++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~---V~~~~r~~~~--~~~---~------------------~~~~~~~~D~~~- 54 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYR---VAIASRNPEE--AAQ---S------------------LGAVPLPTDLEK- 54 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHH---H------------------HTCEEEECCTTT-
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH--HHH---h------------------hCcEEEecCCch-
Confidence 578999999999999999999999987 8899997532 100 0 126788999999
Q ss_pred CCCCCHHHHHHH-------hccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEe
Q psy17679 124 GLGLSETDRATL-------VKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVS 186 (303)
Q Consensus 124 ~~~~~~~~~~~~-------~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iS 186 (303)
+ ++..+ +.++|++|||||.... ...+...+++|+.++..+++++.+. .+..+||++|
T Consensus 55 ~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~is 128 (239)
T 2ekp_A 55 D------DPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIG 128 (239)
T ss_dssp S------CHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEC
Confidence 5 23332 3479999999997532 2346778899999999888887532 2568999999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHH-HHHHHhhhhhh
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGM-LVGIATGVLHT 259 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~-~~~~~~~~~~~ 259 (303)
|..+.... +..+...|..+|...+.+.+.+...+ . ++++||++.+.+..... .......
T Consensus 129 S~~~~~~~----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~---- 194 (239)
T 2ekp_A 129 SVTTFTAG----------GPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEP---- 194 (239)
T ss_dssp CGGGTSCC----------TTSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHH----
T ss_pred chhhccCC----------CCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHH----
Confidence 99665321 01245567788888888777665433 2 78889987655422110 0001000
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+.. ......+...+|+|++++.++..+.
T Consensus 195 ~~~-~~p~~~~~~~~dvA~~~~~l~s~~~ 222 (239)
T 2ekp_A 195 ITA-RIPMGRWARPEEIARVAAVLCGDEA 222 (239)
T ss_dssp HHT-TCTTSSCBCHHHHHHHHHHHTSGGG
T ss_pred HHh-cCCCCCCcCHHHHHHHHHHHcCchh
Confidence 000 0111247899999999999987543
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.6e-18 Score=147.86 Aligned_cols=207 Identities=13% Similarity=0.112 Sum_probs=134.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|++.|+. |++..+.... ..+.+.+.... ...++.++.+|++
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~---Vv~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~Dl~ 87 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFT---VVINYAGKAA--AAEEVAGKIEA------------AGGKALTAQADVS 87 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCE---EEEEESSCSH--HHHHHHHHHHH------------TTCCEEEEECCTT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEcCCCHH--HHHHHHHHHHh------------cCCeEEEEEcCCC
Confidence 35789999999999999999999999997 7666554321 12222221111 1257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEe
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVS 186 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iS 186 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. ....+||++|
T Consensus 88 ~~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 88 DPA------AVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp CHH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 976 5555544 79999999997542 2335678899999999999888764 1235899999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhhhc
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLHTH 260 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~ 260 (303)
|..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+........ ......
T Consensus 162 S~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-----~~~~~~ 224 (267)
T 3u5t_A 162 TSQVGL------------LHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKS-----DEVRDR 224 (267)
T ss_dssp CTHHHH------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC----------------CHHH
T ss_pred Chhhcc------------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCC-----HHHHHH
Confidence 985532 12245568888888888887665443 2 688899775443211100 000011
Q ss_pred cCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 261 LINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 261 ~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+........+..++|+|+++++++....
T Consensus 225 ~~~~~p~~r~~~pedvA~~v~~L~s~~~ 252 (267)
T 3u5t_A 225 FAKLAPLERLGTPQDIAGAVAFLAGPDG 252 (267)
T ss_dssp HHTSSTTCSCBCHHHHHHHHHHHHSTTT
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 1111122346789999999999987543
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=2.8e-18 Score=147.93 Aligned_cols=202 Identities=15% Similarity=0.096 Sum_probs=135.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|++ |++++|+.. .++++... + ..++.++.+|++
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----~-------~~~~~~~~~D~~ 62 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGAK---VAFSDINEA------AGQQLAAE-----L-------GERSMFVRHDVS 62 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECSCHH------HHHHHHHH-----H-------CTTEEEECCCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-----c-------CCceEEEEccCC
Confidence 56789999999999999999999999987 888888642 22222111 0 147889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+.+.+.+. .+ .+||+
T Consensus 63 ~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~ 135 (253)
T 1hxh_A 63 SEA------DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIIN 135 (253)
T ss_dssp CHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEE
Confidence 876 5555544 57999999997532 2345678899999887776655432 14 89999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC------Cc--EEeecceecCccChHHHHHHHHh-h
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN------RV--HISGTGWIDNVYGPIGMLVGIAT-G 255 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~------~~--~ii~pg~~~~~~g~~~~~~~~~~-~ 255 (303)
+||..+.. +......|..+|...+.+.+.+... .. ++++||++.+.... .... .
T Consensus 136 isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~ 198 (253)
T 1hxh_A 136 MASVSSWL------------PIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ-----ASLPKG 198 (253)
T ss_dssp ECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHH-----HHSCTT
T ss_pred EcchhhcC------------CCCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhh-----hccchh
Confidence 99996653 2234566888888888887766533 23 78889876443211 1000 0
Q ss_pred hhhh-ccCC--CCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHT-HLIN--LNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~-~~~~--~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.... +... ......+.+++|+|++++.++..+.
T Consensus 199 ~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~ 234 (253)
T 1hxh_A 199 VSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDES 234 (253)
T ss_dssp CCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGG
T ss_pred hhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccc
Confidence 0000 1100 1112347899999999999987654
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=149.58 Aligned_cols=204 Identities=13% Similarity=0.113 Sum_probs=135.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|++.|+. |++++|+.. .++++... ...++.++.+|+
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dv 61 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGAT---VIVSDINAE------GAKAAAAS------------IGKKARAIAADI 61 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECSCHH------HHHHHHHH------------HCTTEEECCCCT
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH------------hCCceEEEEcCC
Confidence 367899999999999999999999999987 888888642 22222111 025788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHH----hcCCCceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAR----EMKDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~ 182 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++. +.+...+|
T Consensus 62 ~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~i 135 (247)
T 3rwb_A 62 SDPG------SVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRV 135 (247)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEE
Confidence 9976 5555554 78999999997542 23457789999999999888754 33225799
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGV 256 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~ 256 (303)
|++||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+..... .....
T Consensus 136 v~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-----~~~~~ 198 (247)
T 3rwb_A 136 ISIASNTFFA------------GTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKA-----SPHNE 198 (247)
T ss_dssp EEECCTHHHH------------TCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-----SGGGG
T ss_pred EEECchhhcc------------CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccc-----cChhH
Confidence 9999995542 12235567778877777766554432 2 788898764432100 00000
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.............+...+|+|+++++++....
T Consensus 199 ~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~ 230 (247)
T 3rwb_A 199 AFGFVEMLQAMKGKGQPEHIADVVSFLASDDA 230 (247)
T ss_dssp GHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHhcccccCCCcCHHHHHHHHHHHhCccc
Confidence 00000000112235789999999999987654
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-17 Score=147.06 Aligned_cols=206 Identities=11% Similarity=0.062 Sum_probs=141.2
Q ss_pred ccCCcEEEEeCCcc--hhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGGTG--FMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGatG--~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+++|+++||||+| +||+++++.|++.|+. |++++|+... .+.++++.... ..+.++.+
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~---V~~~~r~~~~---~~~~~~~~~~~-------------~~~~~~~~ 87 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAE---VALTYLSETF---KKRVDPLAESL-------------GVKLTVPC 87 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCE---EEEEESSGGG---HHHHHHHHHHH-------------TCCEEEEC
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCE---EEEEeCChHH---HHHHHHHHHhc-------------CCeEEEEc
Confidence 36789999999997 9999999999999987 8899997532 22333332211 35688999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc-CCC
Q psy17679 119 DCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM-KDL 179 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~ 179 (303)
|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++... ...
T Consensus 88 Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 161 (296)
T 3k31_A 88 DVSDAE------SVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNG 161 (296)
T ss_dssp CTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999976 5555554 68999999997532 2345678999999999999999875 123
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH-HHHHHH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI-GMLVGI 252 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~-~~~~~~ 252 (303)
.+||++||..+.. +...+..|..+|...+.+.+.++..+ . +.+.||++.+..... ......
T Consensus 162 g~IV~isS~~~~~------------~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~ 229 (296)
T 3k31_A 162 GSILTLSYYGAEK------------VVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYI 229 (296)
T ss_dssp EEEEEEECGGGTS------------CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHH
T ss_pred CEEEEEEehhhcc------------CCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHH
Confidence 5999999996643 22345567788887888777665443 2 788899876544211 111111
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........+ ...+...+|+|+++++++....
T Consensus 230 ~~~~~~~~p-----~~r~~~pedvA~~v~fL~s~~a 260 (296)
T 3k31_A 230 LTWNKYNSP-----LRRNTTLDDVGGAALYLLSDLG 260 (296)
T ss_dssp HHHHHHHST-----TSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHhcCC-----CCCCCCHHHHHHHHHHHcCCcc
Confidence 111111111 1235788999999999998643
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-18 Score=151.45 Aligned_cols=201 Identities=13% Similarity=0.071 Sum_probs=135.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHh-cCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLR-SCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~-~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.++|+|+||||+|+||+++++.|++ .|+. |++++|+.... .+..+++... ..++.++.+|+
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~---V~~~~r~~~~~--~~~~~~l~~~-------------~~~~~~~~~Dl 63 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGD---VVLTARDVTRG--QAAVQQLQAE-------------GLSPRFHQLDI 63 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSE---EEEEESSHHHH--HHHHHHHHHT-------------TCCCEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhcCCe---EEEEeCChHHH--HHHHHHHHhc-------------CCeeEEEECCC
Confidence 3568999999999999999999999 8887 88999964211 1111111110 14788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHV 185 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~i 185 (303)
++.+ ++..+++ ++|+||||||.... ...+...+++|+.++.++++++.+. ....+||++
T Consensus 64 ~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 64 DDLQ------SIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp TCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 9876 5666555 79999999997532 2445678999999999999999876 112499999
Q ss_pred eCCcccC---CC----------CccccCCC----------------CCCCChhhHHHHHHHHHHHHHHhhCcC-------
Q psy17679 186 STAFTHC---PR----------ERIDEEFY----------------PVPLKYENLIQLISETGDEELSEMTPN------- 229 (303)
Q Consensus 186 SS~~~~~---~~----------~~~~E~~~----------------~~~~~~~~~~~~~k~~~E~~~~~~~~~------- 229 (303)
||..+.. .. ..++|+.. ..+..+...|..+|...+.+.+.+...
T Consensus 138 sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~ 217 (276)
T 1wma_A 138 SSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKG 217 (276)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCC
Confidence 9984431 10 01122110 011122356778887777777655432
Q ss_pred -Cc--EEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 230 -RV--HISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 230 -~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.. +.++||++.+..... ..+++.+|+|++++.++..+
T Consensus 218 ~~i~v~~v~PG~v~t~~~~~---------------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 218 DKILLNACCPGWVRTDMAGP---------------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp SCCEEEEEECCSBCSTTTCT---------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred CceEEEEecCCccccCcCCc---------------------cccCChhHhhhhHhhhhcCc
Confidence 22 778898765433210 23689999999999999865
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.7e-18 Score=149.41 Aligned_cols=208 Identities=10% Similarity=0.054 Sum_probs=136.1
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|++.|+. |++++|..... ..+..+.+. ....++.++.+|+
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~---v~~~~~~~~~~-~~~~~~~~~-------------~~~~~~~~~~~Dl 84 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMA---VAVSHSERNDH-VSTWLMHER-------------DAGRDFKAYAVDV 84 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCE---EEEEECSCHHH-HHHHHHHHH-------------TTTCCCEEEECCT
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCchHH-HHHHHHHHH-------------hcCCceEEEEecC
Confidence 456789999999999999999999999987 77777543211 111111111 1125789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++.+... ++..+||
T Consensus 85 ~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv 158 (269)
T 3gk3_A 85 ADFE------SCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIV 158 (269)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEE
Confidence 9976 5555544 79999999997542 2345678999999999988887542 2567999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+...... ........
T Consensus 159 ~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~- 224 (269)
T 3gk3_A 159 NIGSVNGSR------------GAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV-PQDVLEAK- 224 (269)
T ss_dssp EECCHHHHH------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------CC-
T ss_pred EeCChhhcc------------CCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh-chhHHHHH-
Confidence 999985542 22245677888887777776554432 2 7888997765442211 11111100
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+........+.+++|+|++++.++....
T Consensus 225 ---~~~~~~~~~~~~p~dvA~~v~~L~s~~~ 252 (269)
T 3gk3_A 225 ---ILPQIPVGRLGRPDEVAALIAFLCSDDA 252 (269)
T ss_dssp ---SGGGCTTSSCBCHHHHHHHHHHHTSTTC
T ss_pred ---hhhcCCcCCccCHHHHHHHHHHHhCCCc
Confidence 1111122346789999999999987654
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-17 Score=147.21 Aligned_cols=202 Identities=9% Similarity=0.100 Sum_probs=138.6
Q ss_pred ccCCcEEEEeCCcch--hHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGGTGF--MGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGatG~--iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+++|++|||||+|+ ||+++++.|++.|+. |++++|++. ..+.++++... ..++.++.+
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~---V~~~~r~~~---~~~~~~~~~~~-------------~~~~~~~~~ 88 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAE---LAFTYQGDA---LKKRVEPLAEE-------------LGAFVAGHC 88 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCE---EEEEECSHH---HHHHHHHHHHH-------------HTCEEEEEC
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE---EEEEcCCHH---HHHHHHHHHHh-------------cCCceEEEC
Confidence 467899999999987 999999999999987 888888732 22233333221 146889999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc-CCC
Q psy17679 119 DCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM-KDL 179 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~ 179 (303)
|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ...
T Consensus 89 Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 162 (293)
T 3grk_A 89 DVADAA------SIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG 162 (293)
T ss_dssp CTTCHH------HHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC
T ss_pred CCCCHH------HHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 999976 5555554 78999999997531 2345678999999999999998775 134
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH-----HH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI-----GM 248 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~-----~~ 248 (303)
.+||++||..+.. +...+..|..+|...+.+.+.++..+ . +.+.||++.+..... ..
T Consensus 163 g~Iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~ 230 (293)
T 3grk_A 163 GSILTLTYYGAEK------------VMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYI 230 (293)
T ss_dssp EEEEEEECGGGTS------------BCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHH
T ss_pred CEEEEEeehhhcc------------CCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHH
Confidence 6999999996543 22245567788887887777665443 2 788899775543211 11
Q ss_pred HHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 249 LVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........ ....+...+|+|+++++++....
T Consensus 231 ~~~~~~~~---------p~~r~~~pedvA~~v~~L~s~~~ 261 (293)
T 3grk_A 231 LKWNEYNA---------PLRRTVTIDEVGDVGLYFLSDLS 261 (293)
T ss_dssp HHHHHHHS---------TTSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHhcC---------CCCCCCCHHHHHHHHHHHcCccc
Confidence 11111111 11236789999999999988654
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=144.00 Aligned_cols=181 Identities=11% Similarity=0.052 Sum_probs=134.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+|+||||+|+||+++++.|+++|+. |++++|+.... .-..+.+|++|.
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G~~---V~~~~r~~~~~---------------------------~~~~~~~d~~d~ 71 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKSWN---TISIDFRENPN---------------------------ADHSFTIKDSGE 71 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCTT---------------------------SSEEEECSCSSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCcccc---------------------------cccceEEEeCCH
Confidence 589999999999999999999999987 99999986521 223577888876
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeC
Q psy17679 124 GLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVST 187 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS 187 (303)
+ ++..+++ ++|+||||||.... ...+...+++|+.++..+++++.+. ....+||++||
T Consensus 72 ~------~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 145 (251)
T 3orf_A 72 E------EIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGA 145 (251)
T ss_dssp H------HHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEec
Confidence 5 5555554 57999999996421 2345678899999999999998875 12258999999
Q ss_pred CcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC-----c---EEeecceecCccChHHHHHHHHhhhhhh
Q psy17679 188 AFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR-----V---HISGTGWIDNVYGPIGMLVGIATGVLHT 259 (303)
Q Consensus 188 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~-----~---~ii~pg~~~~~~g~~~~~~~~~~~~~~~ 259 (303)
..+.. +......|..+|...+.+.+.++..+ + +.+.||++.+.. ....
T Consensus 146 ~~~~~------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~-----~~~~------- 201 (251)
T 3orf_A 146 SAALN------------RTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT-----NRKY------- 201 (251)
T ss_dssp GGGGS------------CCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH-----HHHH-------
T ss_pred hhhcc------------CCCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc-----hhhh-------
Confidence 96653 33356678889999999998876662 2 678898664432 1111
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
........+++++|+|++++.++..
T Consensus 202 --~~~~~~~~~~~~~dva~~i~~l~~~ 226 (251)
T 3orf_A 202 --MSDANFDDWTPLSEVAEKLFEWSTN 226 (251)
T ss_dssp --CTTSCGGGSBCHHHHHHHHHHHHHC
T ss_pred --cccccccccCCHHHHHHHHHHHhcC
Confidence 1122345678999999999999987
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=7.1e-18 Score=145.35 Aligned_cols=203 Identities=12% Similarity=0.141 Sum_probs=135.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||++++++|+++|+. .|++++|+... +.++++... .+ ..++.++.+|++
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~--~v~~~~r~~~~----~~~~~l~~~---------~~--~~~~~~~~~D~~ 65 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVENP----TALAELKAI---------NP--KVNITFHTYDVT 65 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCS--EEEEEESSCCH----HHHHHHHHH---------CT--TSEEEEEECCTT
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCc--EEEEEecCchH----HHHHHHHHh---------CC--CceEEEEEEecC
Confidence 56789999999999999999999999985 27788887642 222222211 00 147889999999
Q ss_pred CC-CCCCCHHHHHHHhc-------cccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhc---CC---CceEEEEeC
Q psy17679 122 LP-GLGLSETDRATLVK-------QVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREM---KD---LKAFVHVST 187 (303)
Q Consensus 122 d~-~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~---~~---~~r~i~iSS 187 (303)
|. + ++..+++ ++|+||||||... ...+...+++|+.++.++++++.+. .+ ..+||++||
T Consensus 66 ~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS 138 (254)
T 1sby_A 66 VPVA------ESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICS 138 (254)
T ss_dssp SCHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred CChH------HHHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECc
Confidence 87 5 4444443 7999999999753 4557889999999999999888753 11 367999999
Q ss_pred CcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHh--hhhhh
Q psy17679 188 AFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIAT--GVLHT 259 (303)
Q Consensus 188 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~--~~~~~ 259 (303)
..+.. +......|..+|...+.+.+.+... .. ++++||++.+..... ...... .....
T Consensus 139 ~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~ 204 (254)
T 1sby_A 139 VTGFN------------AIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHT--FNSWLDVEPRVAE 204 (254)
T ss_dssp GGGTS------------CCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHS--CCCGGGSCTTHHH
T ss_pred hhhcc------------CCCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccc--cchhhhhhHHHHH
Confidence 96653 2224557888888888888776543 22 688898764432100 000000 00000
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
.. ....+.+++|+|++++.++..
T Consensus 205 ~~----~~~~~~~~~dvA~~i~~~~~~ 227 (254)
T 1sby_A 205 LL----LSHPTQTSEQCGQNFVKAIEA 227 (254)
T ss_dssp HH----TTSCCEEHHHHHHHHHHHHHH
T ss_pred HH----hcCCCCCHHHHHHHHHHHHHc
Confidence 00 012345899999999998863
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.2e-18 Score=147.22 Aligned_cols=213 Identities=13% Similarity=0.085 Sum_probs=139.2
Q ss_pred CCCCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCC
Q psy17679 32 DEIGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRS 111 (303)
Q Consensus 32 ~~~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 111 (303)
+.+-+.|.+-+++|++|||||+++||+++++.|.++|.. |++++|+.+ .+++..+. ...
T Consensus 17 n~~~~~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~---V~i~~r~~~------~l~~~~~~------------~g~ 75 (273)
T 4fgs_A 17 NLYFQSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGAR---VFITGRRKD------VLDAAIAE------------IGG 75 (273)
T ss_dssp --------CTTTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH------------HCT
T ss_pred ccchhhhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH------------cCC
Confidence 444566666788999999999999999999999999997 889999742 33332221 125
Q ss_pred ceEEEEecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-
Q psy17679 112 KVSAVAGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM- 176 (303)
Q Consensus 112 ~v~~~~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~- 176 (303)
++.++.+|++|.+ ++..+++ ++|++|||||.... .+.|...+++|+.++..+.+++.+.
T Consensus 76 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m 149 (273)
T 4fgs_A 76 GAVGIQADSANLA------ELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLL 149 (273)
T ss_dssp TCEEEECCTTCHH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTE
T ss_pred CeEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 7789999999976 4554443 78999999997532 3457889999999999999988765
Q ss_pred CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChH----
Q psy17679 177 KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPI---- 246 (303)
Q Consensus 177 ~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~---- 246 (303)
.+..++|++||..+... ......|..+|.....+.+.++..+. +.|.||++.+..-..
T Consensus 150 ~~~G~IInisS~~~~~~------------~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~ 217 (273)
T 4fgs_A 150 ARGSSVVLTGSTAGSTG------------TPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGK 217 (273)
T ss_dssp EEEEEEEEECCGGGGSC------------CTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------
T ss_pred hhCCeEEEEeehhhccC------------CCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhcc
Confidence 22358999999976532 22345677777777777765544333 788899775432111
Q ss_pred -H-HHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 247 -G-MLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 247 -~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. ............++. .-+...+|+|+++++++.+.+
T Consensus 218 ~~~~~~~~~~~~~~~~Pl-----gR~g~peeiA~~v~FLaSd~a 256 (273)
T 4fgs_A 218 DPVQQQGLLNALAAQVPM-----GRVGRAEEVAAAALFLASDDS 256 (273)
T ss_dssp CHHHHHHHHHHHHHHSTT-----SSCBCHHHHHHHHHHHHSGGG
T ss_pred CchhhHHHHHHHHhcCCC-----CCCcCHHHHHHHHHHHhCchh
Confidence 0 001111111111111 125678999999999987554
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=4.7e-18 Score=147.67 Aligned_cols=207 Identities=14% Similarity=0.104 Sum_probs=139.0
Q ss_pred cccCCcEEEEeCCc--chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEE
Q psy17679 40 EFYRDKTIFLTGGT--GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVA 117 (303)
Q Consensus 40 ~~~~~~~vlItGat--G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~ 117 (303)
...++|+|+||||+ |+||+++++.|+++|+. |++++|+... .+.++++... ..++.++.
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~-------------~~~~~~~~ 70 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAE---LAFTYVGDRF---KDRITEFAAE-------------FGSELVFP 70 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCE---EEEEESSGGG---HHHHHHHHHH-------------TTCCCEEE
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCC---EEEEecchhh---HHHHHHHHHH-------------cCCcEEEE
Confidence 45778999999999 99999999999999987 8899997432 2333333221 14578999
Q ss_pred ecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc------------cccHHHHHhhhHHHHHHHHHHHHhc-C
Q psy17679 118 GDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF------------DEHIKMAVKINVCGVQAMLQLAREM-K 177 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~------------~~~~~~~~~~N~~~~~~ll~~a~~~-~ 177 (303)
+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. .
T Consensus 71 ~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 144 (271)
T 3ek2_A 71 CDVADDA------QIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLS 144 (271)
T ss_dssp CCTTCHH------HHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEE
T ss_pred CCCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhc
Confidence 9999976 5665554 68999999997532 2235678899999999999999775 1
Q ss_pred CCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH-HHHH
Q psy17679 178 DLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI-GMLV 250 (303)
Q Consensus 178 ~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~-~~~~ 250 (303)
+..+||++||..+.. +...+..|..+|...+.+.+.+...+ . +.+.||++.+..... ....
T Consensus 145 ~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~ 212 (271)
T 3ek2_A 145 DDASLLTLSYLGAER------------AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFG 212 (271)
T ss_dssp EEEEEEEEECGGGTS------------BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHH
T ss_pred cCceEEEEecccccc------------CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchH
Confidence 235899999996543 22345567778877787777665432 2 788899775433211 1111
Q ss_pred HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 251 GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......... .....+..++|+|+++++++....
T Consensus 213 ~~~~~~~~~-----~~~~~~~~pedva~~i~~l~s~~~ 245 (271)
T 3ek2_A 213 KILDFVESN-----SPLKRNVTIEQVGNAGAFLLSDLA 245 (271)
T ss_dssp HHHHHHHHH-----STTSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHhc-----CCcCCCCCHHHHHHHHHHHcCccc
Confidence 111111111 111236789999999999998643
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=9.3e-18 Score=146.46 Aligned_cols=204 Identities=11% Similarity=0.063 Sum_probs=138.2
Q ss_pred cCCcEEEEeCCc--chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGT--GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGat--G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+++|+++||||+ |+||+++++.|++.|+. |++++|+... .+.++++... ..++.++.+|
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~---V~~~~r~~~~---~~~~~~l~~~-------------~~~~~~~~~D 64 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGAT---LAFTYLNESL---EKRVRPIAQE-------------LNSPYVYELD 64 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCE---EEEEESSTTT---HHHHHHHHHH-------------TTCCCEEECC
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHHh-------------cCCcEEEEcC
Confidence 567899999999 99999999999999987 8899998641 2233333221 0246789999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc-CCCc
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM-KDLK 180 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~ 180 (303)
++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ....
T Consensus 65 ~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g 138 (275)
T 2pd4_A 65 VSKEE------HFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGA 138 (275)
T ss_dssp TTCHH------HHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCC
Confidence 99976 4555544 68999999997532 2245678899999999999999875 1125
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH-HHHHHH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG-MLVGIA 253 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~-~~~~~~ 253 (303)
+||++||..+.. +...+..|..+|...+.+.+.+...+ . +.++||++.+...... ......
T Consensus 139 ~iv~isS~~~~~------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~ 206 (275)
T 2pd4_A 139 SVLTLSYLGSTK------------YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMIL 206 (275)
T ss_dssp EEEEEECGGGTS------------BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHH
T ss_pred EEEEEecchhcC------------CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHH
Confidence 999999986542 22245568888888888777665433 2 7888998765432110 000111
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.......+ ...+.+.+|+|++++.++...
T Consensus 207 ~~~~~~~p-----~~~~~~p~dva~~~~~l~s~~ 235 (275)
T 2pd4_A 207 KWNEINAP-----LRKNVSLEEVGNAGMYLLSSL 235 (275)
T ss_dssp HHHHHHST-----TSSCCCHHHHHHHHHHHHSGG
T ss_pred HHHHhcCC-----cCCCCCHHHHHHHHHHHhCcc
Confidence 10000111 113578999999999998754
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-18 Score=151.36 Aligned_cols=208 Identities=13% Similarity=0.100 Sum_probs=131.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|++.|+. |+++.|........+.+.+.+. ....++.++.+|+
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~~Dv 72 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESVN---LVLHYHQAKDSDTANKLKDELE------------DQGAKVALYQSDL 72 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSCE---EEEEESCGGGHHHHHHHHHHHH------------TTTCEEEEEECCC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEecCccCHHHHHHHHHHHH------------hcCCcEEEEECCC
Confidence 367899999999999999999999999987 8888886443222222222111 1125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHV 185 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~i 185 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. .+..+||++
T Consensus 73 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 146 (262)
T 3ksu_A 73 SNEE------EVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI 146 (262)
T ss_dssp CSHH------HHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence 9976 5555554 78999999997532 2345678899999999999999874 234689999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLHT 259 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~ 259 (303)
||..+... ......|..+|...+.+.+.+...+ . +.+.||++.+.+... ........
T Consensus 147 sS~~~~~~------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-----~~~~~~~~ 209 (262)
T 3ksu_A 147 ATSLLAAY------------TGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYG-----QETKESTA 209 (262)
T ss_dssp CCCHHHHH------------HCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHT-----CC------
T ss_pred echhhccC------------CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc-----cCchHHHH
Confidence 99854321 1112345566666666666554333 3 788898765432110 00000001
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
.+........+...+|+|+++++++..
T Consensus 210 ~~~~~~~~~r~~~pedvA~~v~~L~s~ 236 (262)
T 3ksu_A 210 FHKSQAMGNQLTKIEDIAPIIKFLTTD 236 (262)
T ss_dssp ------CCCCSCCGGGTHHHHHHHHTT
T ss_pred HHHhcCcccCCCCHHHHHHHHHHHcCC
Confidence 111112223468899999999999875
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=5.6e-18 Score=145.70 Aligned_cols=199 Identities=11% Similarity=0.122 Sum_probs=131.6
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+++||||+|+||+++++.|++.|+. |++++|+.. .++++... + ..++.++.+|++|.+
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~~-----~-------~~~~~~~~~Dv~~~~ 59 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHK---VIATGRRQE------RLQELKDE-----L-------GDNLYIAQLDVRNRA 59 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----H-------CTTEEEEECCTTCHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-----h-------cCceEEEEcCCCCHH
Confidence 57999999999999999999999987 888998642 22222111 0 146889999999976
Q ss_pred CCCCHHHHHHHhc-------cccEEEEcceecc----c----cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEe
Q psy17679 125 LGLSETDRATLVK-------QVNIVFHGAATVR----F----DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVS 186 (303)
Q Consensus 125 ~~~~~~~~~~~~~-------~~dvVi~~a~~~~----~----~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iS 186 (303)
++..+++ ++|++|||||... . ...+...+++|+.++..+++++.+. ++..+||++|
T Consensus 60 ------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~is 133 (248)
T 3asu_A 60 ------AIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIG 133 (248)
T ss_dssp ------HHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred ------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEc
Confidence 6666654 6899999999752 1 2345678999999999888887632 1567999999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceec-CccChHHHHHHHHhhhhhh
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWID-NVYGPIGMLVGIATGVLHT 259 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~-~~~g~~~~~~~~~~~~~~~ 259 (303)
|..+.. +......|..+|...+.+.+.+...+ . +.+.||++. +.+........ ......
T Consensus 134 S~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~--~~~~~~ 199 (248)
T 3asu_A 134 STAGSW------------PYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGD--DGKAEK 199 (248)
T ss_dssp CGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-------------------
T ss_pred cchhcc------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCc--hHHHHH
Confidence 996643 22244578888888888877654332 2 788899775 33321100000 000000
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+ ....++..+|+|+++++++..+.
T Consensus 200 ~~----~~~~~~~p~dvA~~v~~l~s~~~ 224 (248)
T 3asu_A 200 TY----QNTVALTPEDVSEAVWWVSTLPA 224 (248)
T ss_dssp ---------CCBCHHHHHHHHHHHHHSCT
T ss_pred HH----hccCCCCHHHHHHHHHHHhcCCc
Confidence 01 11224689999999999998643
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=7.2e-18 Score=146.12 Aligned_cols=211 Identities=12% Similarity=0.106 Sum_probs=135.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|+++|+. |++++|+... .+.+.+.+. ....++.++.+|+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~~~D~ 65 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTA---IALLDMNREA---LEKAEASVR------------EKGVEARSYVCDV 65 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHH------------TTTSCEEEEECCT
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHH------------hcCCcEEEEEecC
Confidence 367799999999999999999999999987 8889986421 111111111 0124788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceec-cc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATV-RF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~-~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~ 182 (303)
+|.+ ++..+++ ++|++|||||.. .. ...+...+++|+.++.++++++.+. ++..+|
T Consensus 66 ~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~i 139 (262)
T 1zem_A 66 TSEE------AVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRI 139 (262)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence 9876 4554443 789999999975 21 2345778899999999998887653 245799
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHH----
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGI---- 252 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~---- 252 (303)
|++||..+... ......|..+|...+.+.+.+... .. ++++||++.+.+... .....
T Consensus 140 v~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~ 206 (262)
T 1zem_A 140 VNTASMAGVKG------------PPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWE-RQVELQAKV 206 (262)
T ss_dssp EEECCHHHHSC------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHH-HHHHHHHHH
T ss_pred EEEcchhhccC------------CCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhh-hccchhhhc
Confidence 99999865432 123456777787777666655432 23 788899775443211 00000
Q ss_pred ----Hh--hh-hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ----AT--GV-LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ----~~--~~-~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. .. ....+........+...+|+|+++++++....
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~ 249 (262)
T 1zem_A 207 GSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDS 249 (262)
T ss_dssp TCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGG
T ss_pred cccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence 00 00 00000000011236789999999999987543
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=144.37 Aligned_cols=211 Identities=11% Similarity=0.010 Sum_probs=138.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+++||+++++.|.++|.. |.+++|+..... .++++.+. ..++.++.+|+
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~---Vv~~~r~~~~~~---~~~~~~~~-------------~~~~~~~~~Dv 64 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERAI---PVVFARHAPDGA---FLDALAQR-------------QPRATYLPVEL 64 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCCHH---HHHHHHHH-------------CTTCEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEECCcccHH---HHHHHHhc-------------CCCEEEEEeec
Confidence 378899999999999999999999999987 888999865432 23333222 26788999999
Q ss_pred CCCCCCCCHHHHHHHh-------ccccEEEEcceeccc------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEE
Q psy17679 121 SLPGLGLSETDRATLV-------KQVNIVFHGAATVRF------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVHV 185 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~i 185 (303)
++.+ ++..++ .++|++|||||.... ...|...+++|+.++..+.+++.+. .+..+||++
T Consensus 65 ~~~~------~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVni 138 (258)
T 4gkb_A 65 QDDA------QCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNI 138 (258)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 9976 444443 379999999997431 3456788999999988887777543 123689999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHH-HHhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVG-IATGVLH 258 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~-~~~~~~~ 258 (303)
||..+... ......|..+|.....+.+.++..+ . +.+.||++.+.......... .......
T Consensus 139 sS~~~~~~------------~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~ 206 (258)
T 4gkb_A 139 SSKTAVTG------------QGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLA 206 (258)
T ss_dssp CCTHHHHC------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHH
T ss_pred eehhhccC------------CCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHH
Confidence 99966432 2234556677776777666554433 3 78889988655432211000 0000011
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+...-....-+...+|+|+++++++...+
T Consensus 207 ~~~~~~plg~R~g~peeiA~~v~fLaS~~a 236 (258)
T 4gkb_A 207 EIAAKVPLGRRFTTPDEIADTAVFLLSPRA 236 (258)
T ss_dssp HHHTTCTTTTSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhcCCCCCCCcCHHHHHHHHHHHhCchh
Confidence 111111111246788999999999887554
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.77 E-value=4.8e-18 Score=149.11 Aligned_cols=198 Identities=14% Similarity=0.129 Sum_probs=135.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHH-HHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLD-AIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~-~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
.+++|+|+||||+|+||+++++.|++.|+. |++++|+... .+.+. .+... ...++.++.+|
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~~------------~~~~~~~~~~D 86 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGAH---VVVTARSKET---LQKVVSHCLEL------------GAASAHYIAGT 86 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHHH------------TCSEEEEEECC
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHHHh------------CCCceEEEeCC
Confidence 367899999999999999999999999987 9999997431 11111 11110 01368899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEc-ceeccc------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEE
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHG-AATVRF------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFV 183 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~-a~~~~~------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i 183 (303)
++|.+ ++..+++ ++|+|||| ||.... ...+...+++|+.++..+++++.+. .+..+||
T Consensus 87 l~d~~------~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv 160 (286)
T 1xu9_A 87 MEDMT------FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIV 160 (286)
T ss_dssp TTCHH------HHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEE
Confidence 99875 4555443 79999999 565421 2334678899999999998887653 1236999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC------c--EEeecceecCccChHHHHHHHHhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR------V--HISGTGWIDNVYGPIGMLVGIATG 255 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~------~--~ii~pg~~~~~~g~~~~~~~~~~~ 255 (303)
++||..+... ......|..+|...+.+.+.+...+ . +++.||++.+.... ....+
T Consensus 161 ~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~-----~~~~~ 223 (286)
T 1xu9_A 161 VVSSLAGKVA------------YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM-----KAVSG 223 (286)
T ss_dssp EEEEGGGTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH-----HHSCG
T ss_pred EECCcccccC------------CCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHH-----Hhccc
Confidence 9999966432 2245678888888888777654332 2 67889876443211 11111
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....+++.+|+|+.++.++..+.
T Consensus 224 ---------~~~~~~~~~~~vA~~i~~~~~~~~ 247 (286)
T 1xu9_A 224 ---------IVHMQAAPKEECALEIIKGGALRQ 247 (286)
T ss_dssp ---------GGGGGCBCHHHHHHHHHHHHHTTC
T ss_pred ---------cccCCCCCHHHHHHHHHHHHhcCC
Confidence 112356899999999999987654
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-17 Score=146.26 Aligned_cols=211 Identities=12% Similarity=0.080 Sum_probs=138.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHH-HHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++|++|||||+|+||+++++.|++.|+. |++++|+.... .+.+ +++.. ...++.++.+|+
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~~-------------~~~~~~~~~~D~ 88 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGCK---VIVNYANSTES--AEEVVAAIKK-------------NGSDAACVKANV 88 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHHH--HHHHHHHHHH-------------TTCCEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCchHH--HHHHHHHHHH-------------hCCCeEEEEcCC
Confidence 57799999999999999999999999987 88888875311 1111 11111 125788999999
Q ss_pred CCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEE
Q psy17679 121 SLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHV 185 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~i 185 (303)
++.+ ++..++ .++|++|||||.... ...+...+++|+.++.++++++.+. .+..+||++
T Consensus 89 ~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 162 (283)
T 1g0o_A 89 GVVE------DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 162 (283)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 9876 444443 378999999997532 2345778999999999999998875 245799999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHHHHHh-----
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLVGIAT----- 254 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~~~~~----- 254 (303)
||..+.... ......|..+|...+.+.+.+... .. ++++||++.+..... .......
T Consensus 163 sS~~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~ 230 (283)
T 1g0o_A 163 GSITGQAKA-----------VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHA-VCREYIPNGENL 230 (283)
T ss_dssp CCGGGTCSS-----------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHH-HGGGGSTTCTTC
T ss_pred echhhccCC-----------CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhh-hhhhcccccccc
Confidence 998654321 112556788888888887766433 22 788898764432110 0000000
Q ss_pred -h-hhhhccC-CCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 -G-VLHTHLI-NLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 -~-~~~~~~~-~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. ....+.. .......+.+.+|+|+++++++....
T Consensus 231 ~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~ 267 (283)
T 1g0o_A 231 SNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDG 267 (283)
T ss_dssp CHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred CHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHhCccc
Confidence 0 0000000 00111236899999999999997654
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.7e-18 Score=146.73 Aligned_cols=204 Identities=10% Similarity=0.088 Sum_probs=137.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+++||+++++.|.++|.. |.+++|+... ..+..+++.. ...++.++.+|+
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~---Vv~~~~~~~~--~~~~~~~i~~-------------~g~~~~~~~~Dv 65 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSI---VVAVELLEDR--LNQIVQELRG-------------MGKEVLGVKADV 65 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH--HHHHHHHHHH-------------TTCCEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEECCHHH--HHHHHHHHHh-------------cCCcEEEEEccC
Confidence 478999999999999999999999999987 8888986431 1122222221 125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~ 182 (303)
++++ ++..+++ ++|++|||||.... .+.|...+++|+.++..+.+++.+. ++..+|
T Consensus 66 t~~~------~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~I 139 (254)
T 4fn4_A 66 SKKK------DVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVI 139 (254)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEE
Confidence 9987 5555543 78999999996421 2356789999999988887777553 255799
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccCh-----HHH-HH
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGP-----IGM-LV 250 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~-----~~~-~~ 250 (303)
|++||..+... ......|..+|.....+.+.++..+ . +.+.||++.+.... ... ..
T Consensus 140 VnisS~~g~~~------------~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~ 207 (254)
T 4fn4_A 140 VNTASIAGIRG------------GFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMR 207 (254)
T ss_dssp EEECCGGGTCS------------SSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHH
T ss_pred EEEechhhcCC------------CCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHH
Confidence 99999976532 2233456667766666666554433 3 78889988654321 111 11
Q ss_pred HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 251 GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...... ... .-+...+|+|+++++++.+.+
T Consensus 208 ~~~~~~--~~~------~R~g~pediA~~v~fLaSd~a 237 (254)
T 4fn4_A 208 TLTKLM--SLS------SRLAEPEDIANVIVFLASDEA 237 (254)
T ss_dssp HHHHHH--TTC------CCCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhcC--CCC------CCCcCHHHHHHHHHHHhCchh
Confidence 111111 111 124678999999999987554
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2e-17 Score=143.53 Aligned_cols=211 Identities=13% Similarity=0.047 Sum_probs=138.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|++.|+. |++++|+.... .+..+++... ....++.++.+|++
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~---V~~~~r~~~~~--~~~~~~l~~~-----------~~~~~~~~~~~Dv~ 69 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAA---VAFCARDGERL--RAAESALRQR-----------FPGARLFASVCDVL 69 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHH-----------STTCCEEEEECCTT
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHHh-----------cCCceEEEEeCCCC
Confidence 67899999999999999999999999987 88999974321 1111111110 00135889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ++..+||+
T Consensus 70 ~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~ 143 (265)
T 3lf2_A 70 DAL------QVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVC 143 (265)
T ss_dssp CHH------HHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEE
Confidence 976 4555443 78999999997532 2345778999999999999888653 24578999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH--------H
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML--------V 250 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~--------~ 250 (303)
+||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+........ .
T Consensus 144 isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 211 (265)
T 3lf2_A 144 VNSLLASQ------------PEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDW 211 (265)
T ss_dssp EEEGGGTS------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CH
T ss_pred ECCcccCC------------CCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCH
Confidence 99996653 22345678888888888777665443 2 688898764432111000 0
Q ss_pred HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 251 GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.......... .......+...+|+|+++++++....
T Consensus 212 ~~~~~~~~~~--~~~p~~r~~~pedvA~~v~fL~s~~~ 247 (265)
T 3lf2_A 212 AQWTAQLARN--KQIPLGRLGKPIEAARAILFLASPLS 247 (265)
T ss_dssp HHHHHHHHHH--TTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHhhc--cCCCcCCCcCHHHHHHHHHHHhCchh
Confidence 0000000000 00112246789999999999987544
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-17 Score=145.43 Aligned_cols=206 Identities=11% Similarity=0.062 Sum_probs=140.7
Q ss_pred ccCCcEEEEeCCc--chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGGT--GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGat--G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+++|+++||||+ |+||+++++.|++.|+. |++++|+.... ..+.++++... ...++.++.+
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~---v~~~~~~~~~~-~~~~~~~l~~~------------~~~~~~~~~~ 80 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAA---VAITYASRAQG-AEENVKELEKT------------YGIKAKAYKC 80 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCE---EEECBSSSSSH-HHHHHHHHHHH------------HCCCEECCBC
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCe---EEEEeCCcchh-HHHHHHHHHHh------------cCCceeEEec
Confidence 4678999999999 99999999999999987 88888875432 12233333221 1257889999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCce
Q psy17679 119 DCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKA 181 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r 181 (303)
|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. .+..+
T Consensus 81 Dl~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~ 154 (267)
T 3gdg_A 81 QVDSYE------SCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGS 154 (267)
T ss_dssp CTTCHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred CCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCce
Confidence 999976 5555544 67999999997542 2345678999999999998887432 15679
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecceecCccChH---HHHHHHH
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGWIDNVYGPI---GMLVGIA 253 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~~~~~~g~~---~~~~~~~ 253 (303)
||++||..+.... +......|..+|...+.+.+.+...+ . +.+.||++.+..... .....
T Consensus 155 iv~isS~~~~~~~----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~-- 222 (267)
T 3gdg_A 155 LVITASMSGHIAN----------FPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQL-- 222 (267)
T ss_dssp EEEECCGGGTSCC----------SSSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHH--
T ss_pred EEEEccccccccC----------CCCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHH--
Confidence 9999998654321 11234567788877777777654433 2 677899876544221 11111
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+........+.+++|+|++++.++...
T Consensus 223 -------~~~~~~~~r~~~~~dva~~~~~l~s~~ 249 (267)
T 3gdg_A 223 -------WHSMIPMGRDGLAKELKGAYVYFASDA 249 (267)
T ss_dssp -------HHTTSTTSSCEETHHHHHHHHHHHSTT
T ss_pred -------HHhcCCCCCCcCHHHHHhHhheeecCc
Confidence 111222345789999999999998754
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.5e-17 Score=143.72 Aligned_cols=200 Identities=11% Similarity=0.052 Sum_probs=136.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCccc-----HHHHHHHHHHhHHHhhhhccCcCcCCceEEE
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKD-----IQERLDAIFEDRLFWRLRAEVPDFRSKVSAV 116 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~-----~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~ 116 (303)
+++|+++||||+|+||+++++.|++.|+. |++++|+..... ..+..+.+... ..++.++
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 67 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGAN---VAIAAKSAVANPKLPGTIHSAAAAVNAA-------------GGQGLAL 67 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCCSCCTTSCCCHHHHHHHHHHH-------------TSEEEEE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCE---EEEEeccchhhhhhHHHHHHHHHHHHhc-------------CCeEEEE
Confidence 57799999999999999999999999987 999999865321 11111111111 2578899
Q ss_pred EecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCC
Q psy17679 117 AGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDL 179 (303)
Q Consensus 117 ~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~ 179 (303)
.+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+.+++.+. ++.
T Consensus 68 ~~Dv~~~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 141 (274)
T 3e03_A 68 KCDIREED------QVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPN 141 (274)
T ss_dssp ECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSS
T ss_pred eCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCC
Confidence 99999976 5555543 78999999997532 2345678899999999999888653 255
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecce-ecCccChHHHHHHH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGW-IDNVYGPIGMLVGI 252 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~-~~~~~g~~~~~~~~ 252 (303)
.+||++||..+.... +......|..+|...+.+.+.++..+ . +.+.||+ +.+... ..
T Consensus 142 g~iv~isS~~~~~~~----------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~------~~ 205 (274)
T 3e03_A 142 PHILTLAPPPSLNPA----------WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI------NM 205 (274)
T ss_dssp CEEEECCCCCCCCHH----------HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------
T ss_pred ceEEEECChHhcCCC----------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh------hh
Confidence 799999998554210 02245568888888888777665443 2 6788984 433321 11
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. ......+...+|+|++++.++....
T Consensus 206 ~~---------~~~~~~~~~pedvA~~v~~l~s~~~ 232 (274)
T 3e03_A 206 LP---------GVDAAACRRPEIMADAAHAVLTREA 232 (274)
T ss_dssp -----------CCCGGGSBCTHHHHHHHHHHHTSCC
T ss_pred cc---------cccccccCCHHHHHHHHHHHhCccc
Confidence 11 1112236789999999999997654
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-17 Score=143.85 Aligned_cols=204 Identities=13% Similarity=0.138 Sum_probs=136.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|+. |+++.+.... ...+..+++... ..++.++.+|++
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~---v~~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~D~~ 67 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGAL---VAIHYGNRKE-EAEETVYEIQSN-------------GGSAFSIGANLE 67 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCSH-HHHHHHHHHHHT-------------TCEEEEEECCTT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEeCCchH-HHHHHHHHHHhc-------------CCceEEEecCcC
Confidence 56799999999999999999999999987 7665443321 111222222111 257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCc
Q psy17679 122 LPGLGLSETDRATLVK-------------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLK 180 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~ 180 (303)
+.+ .+..+++ .+|++|||||.... ...+...+++|+.++..+++++.+. .+..
T Consensus 68 ~~~------~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 141 (255)
T 3icc_A 68 SLH------GVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNS 141 (255)
T ss_dssp SHH------HHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEE
T ss_pred CHH------HHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCC
Confidence 876 4444443 29999999997532 2234678899999999999999765 2345
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH----HHH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG----MLV 250 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~----~~~ 250 (303)
+||++||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+...... ...
T Consensus 142 ~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~ 209 (255)
T 3icc_A 142 RIINISSAATRI------------SLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMK 209 (255)
T ss_dssp EEEEECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHH
T ss_pred EEEEeCChhhcc------------CCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHH
Confidence 899999996643 22345678888888888777665443 2 7888998765443211 111
Q ss_pred HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 251 GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..... ......+.+++|+|++++.++....
T Consensus 210 ~~~~~--------~~~~~~~~~~~dva~~~~~l~s~~~ 239 (255)
T 3icc_A 210 QYATT--------ISAFNRLGEVEDIADTAAFLASPDS 239 (255)
T ss_dssp HHHHH--------TSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred Hhhhc--------cCCcCCCCCHHHHHHHHHHHhCccc
Confidence 11111 1112346789999999999887543
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.9e-17 Score=139.33 Aligned_cols=204 Identities=11% Similarity=0.064 Sum_probs=137.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+++||+++++.|.++|.. |.+.+|+... +..+.+... ..++.++.+|++
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga~---Vvi~~r~~~~----~~~~~~~~~-------------g~~~~~~~~Dv~ 66 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGAE---VVCAARRAPD----ETLDIIAKD-------------GGNASALLIDFA 66 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCCH----HHHHHHHHT-------------TCCEEEEECCTT
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCCE---EEEEeCCcHH----HHHHHHHHh-------------CCcEEEEEccCC
Confidence 78999999999999999999999999998 8888887531 222222221 257889999999
Q ss_pred CCCCCCCHHHHHHHhc--cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceEEEEeCC
Q psy17679 122 LPGLGLSETDRATLVK--QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~i~iSS~ 188 (303)
|.. ++..+++ ++|++|||||.... ...|...+++|+.++..+.+++.+. +...+||++||.
T Consensus 67 d~~------~v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~ 140 (247)
T 4hp8_A 67 DPL------AAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASL 140 (247)
T ss_dssp STT------TTTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred CHH------HHHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEech
Confidence 987 3444443 79999999997542 3457889999999998888766432 235799999999
Q ss_pred cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHH-HHhhhhhhcc
Q psy17679 189 FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVG-IATGVLHTHL 261 (303)
Q Consensus 189 ~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~-~~~~~~~~~~ 261 (303)
.+... ......|..+|.....+.+.++..+. +.|.||++.+.......... ........++
T Consensus 141 ~~~~g------------~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~P 208 (247)
T 4hp8_A 141 LSFQG------------GIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIP 208 (247)
T ss_dssp GGTSC------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCT
T ss_pred hhCCC------------CCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCC
Confidence 76532 22334566777766666665544433 78889988655432211000 0000111111
Q ss_pred CCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 262 INLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 262 ~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..-+...+|+|.++++++.+.+
T Consensus 209 -----lgR~g~peeiA~~v~fLaSd~a 230 (247)
T 4hp8_A 209 -----AGRWGHSEDIAGAAVFLSSAAA 230 (247)
T ss_dssp -----TSSCBCTHHHHHHHHHHTSGGG
T ss_pred -----CCCCcCHHHHHHHHHHHhCchh
Confidence 1125678999999999887554
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=143.74 Aligned_cols=206 Identities=12% Similarity=0.050 Sum_probs=137.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+++||+++++.|.+.|.. |.+.+|+.. ...+..+++... ..++.++.+|++
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga~---Vvi~~~~~~--~~~~~~~~l~~~-------------g~~~~~~~~Dv~ 68 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGAR---VILNDIRAT--LLAESVDTLTRK-------------GYDAHGVAFDVT 68 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEECCSCHH--HHHHHHHHHHHT-------------TCCEEECCCCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH--HHHHHHHHHHhc-------------CCcEEEEEeeCC
Confidence 68899999999999999999999999997 888888642 112222222221 257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~i 183 (303)
+.+ ++..+++ ++|++|||||.... .+.|...+++|+.++..+.+++.+. ++..+||
T Consensus 69 ~~~------~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IV 142 (255)
T 4g81_D 69 DEL------AIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKII 142 (255)
T ss_dssp CHH------HHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHH------HHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEE
Confidence 976 5555443 68999999997542 3457789999999998888776542 2457999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHH-HHHhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLV-GIATGV 256 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~-~~~~~~ 256 (303)
++||..+... ......|..+|.....+.+.++..+ . +.+.||++.+.......-. ......
T Consensus 143 nisS~~~~~~------------~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~ 210 (255)
T 4g81_D 143 NIGSLTSQAA------------RPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWV 210 (255)
T ss_dssp EECCGGGTSB------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHH
T ss_pred EEeehhhcCC------------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHH
Confidence 9999976532 2234556677776666666554433 3 7888998765543221100 000111
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...++. .-+...+|+|+++++++...+
T Consensus 211 ~~~~Pl-----~R~g~pediA~~v~fL~S~~a 237 (255)
T 4g81_D 211 KSSTPS-----QRWGRPEELIGTAIFLSSKAS 237 (255)
T ss_dssp HHHSTT-----CSCBCGGGGHHHHHHHHSGGG
T ss_pred HhCCCC-----CCCcCHHHHHHHHHHHhCchh
Confidence 111111 125678999999999887544
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-17 Score=144.47 Aligned_cols=211 Identities=12% Similarity=0.105 Sum_probs=133.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|+++|++ |++++|+... ++++.. .+.... ...++.++.+|++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~------~~~~~~-----~l~~~~--~~~~~~~~~~D~~ 68 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAK---VALVDWNLEA------GVQCKA-----ALHEQF--EPQKTLFIQCDVA 68 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH------HHHHHH-----HHTTTS--CGGGEEEEECCTT
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCE---EEEEECCHHH------HHHHHH-----HHHhhc--CCCceEEEecCCC
Confidence 56789999999999999999999999987 8899996421 111111 010000 0146889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHH----hcC--CCceEEEEeCC
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAR----EMK--DLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~----~~~--~~~r~i~iSS~ 188 (303)
|.+ ++..+++ ++|+||||||... ...+...+++|+.++..+.+.+. +.+ ...+||++||.
T Consensus 69 ~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~ 141 (267)
T 2gdz_A 69 DQQ------QLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL 141 (267)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCc
Confidence 876 5555554 5799999999754 45678889999987766555443 321 15799999999
Q ss_pred cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhh------CcCCc--EEeecceecCccChHHHHHHHHhhhhh--
Q psy17679 189 FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEM------TPNRV--HISGTGWIDNVYGPIGMLVGIATGVLH-- 258 (303)
Q Consensus 189 ~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~------~~~~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~-- 258 (303)
.+... ......|..+|...+.+.+.+ ..... ++++||++.+..... .......+...
T Consensus 142 ~~~~~------------~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~ 208 (267)
T 2gdz_A 142 AGLMP------------VAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES-IEKEENMGQYIEY 208 (267)
T ss_dssp GGTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG-GGCHHHHGGGGGG
T ss_pred cccCC------------CCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc-cccccccchhhhH
Confidence 76532 223456778888888877753 12222 788899764432110 00000000000
Q ss_pred -hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 -THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 -~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....+.....+++++|+|++++.++.++.
T Consensus 209 ~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~ 239 (267)
T 2gdz_A 209 KDHIKDMIKYYGILDPPLIANGLITLIEDDA 239 (267)
T ss_dssp HHHHHHHHHHHCCBCHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHhccccCCCHHHHHHHHHHHhcCcC
Confidence 000000112347899999999999998654
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-17 Score=143.93 Aligned_cols=198 Identities=14% Similarity=0.057 Sum_probs=135.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|++ |++++|+.. .++++.. +...++.++.+|++
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~D~~ 62 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGAS---LVAVDREER------LLAEAVA------------ALEAEAIAVVADVS 62 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------TCCSSEEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHH------------HhcCceEEEEcCCC
Confidence 56789999999999999999999999987 889999742 2222211 11146889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhcC-CCceEEEEe
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREMK-DLKAFVHVS 186 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~~-~~~r~i~iS 186 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+.- ...+||++|
T Consensus 63 ~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 136 (263)
T 2a4k_A 63 DPK------AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTG 136 (263)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 876 5555544 57999999997542 23456788999999999999987751 146999999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhC----cCCc--EEeecceecCccChH---HHHHHHHhhhh
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMT----PNRV--HISGTGWIDNVYGPI---GMLVGIATGVL 257 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~----~~~~--~ii~pg~~~~~~g~~---~~~~~~~~~~~ 257 (303)
|..+. . ......|..+|...+.+.+.+. .... ++++||++.+..... ........
T Consensus 137 S~~~~-~------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~--- 200 (263)
T 2a4k_A 137 SVAGL-G------------AFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVG--- 200 (263)
T ss_dssp CCTTC-C------------HHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHH---
T ss_pred cchhc-C------------CCCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHh---
Confidence 99654 1 1234567777776666665443 3333 788899875543211 11111111
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+ ...+++.+|+|+++++++..+.
T Consensus 201 -~~p-----~~~~~~p~dvA~~v~~l~s~~~ 225 (263)
T 2a4k_A 201 -ASP-----LGRAGRPEEVAQAALFLLSEES 225 (263)
T ss_dssp -TST-----TCSCBCHHHHHHHHHHHHSGGG
T ss_pred -cCC-----CCCCcCHHHHHHHHHHHhCccc
Confidence 111 1236899999999999987653
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.2e-18 Score=143.93 Aligned_cols=196 Identities=12% Similarity=0.136 Sum_probs=137.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
.++|+++||||+++||+++++.|.+.|.. |.+++|+.+... .....++..+.+|++
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~---Vv~~~~~~~~~~---------------------~~~~~~~~~~~~Dv~ 64 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAE---VVALGLDADGVH---------------------APRHPRIRREELDIT 64 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSTTSTT---------------------SCCCTTEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHHHHh---------------------hhhcCCeEEEEecCC
Confidence 47899999999999999999999999998 889999764321 012368889999999
Q ss_pred CCCCCCCHHHHHHHhc---cccEEEEcceeccc-----cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEEeCCccc
Q psy17679 122 LPGLGLSETDRATLVK---QVNIVFHGAATVRF-----DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVHVSTAFTH 191 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~---~~dvVi~~a~~~~~-----~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~iSS~~~~ 191 (303)
|.+ ++.++++ ++|++|||||.... ...|...+++|+.++..+.+++.+. ++..+||++||..+.
T Consensus 65 ~~~------~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~ 138 (242)
T 4b79_A 65 DSQ------RLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYST 138 (242)
T ss_dssp CHH------HHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGT
T ss_pred CHH------HHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecccc
Confidence 976 5555554 89999999997542 2356789999999988887777553 123689999999765
Q ss_pred CCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChH-----HHHHHHHhhhhhhc
Q psy17679 192 CPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPI-----GMLVGIATGVLHTH 260 (303)
Q Consensus 192 ~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~-----~~~~~~~~~~~~~~ 260 (303)
.. ......|..+|.....+.+.++..+. +.+.||++.+..... .....+... +
T Consensus 139 ~~------------~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~----~ 202 (242)
T 4b79_A 139 FG------------SADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQR----T 202 (242)
T ss_dssp SC------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHT----C
T ss_pred CC------------CCCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhc----C
Confidence 32 22345677777777777665544433 788899886554221 111222111 1
Q ss_pred cCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 261 LINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 261 ~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+ ..-+...+|+|+++++++.+.+
T Consensus 203 P-----lgR~g~peeiA~~v~fLaSd~a 225 (242)
T 4b79_A 203 P-----LARWGEAPEVASAAAFLCGPGA 225 (242)
T ss_dssp T-----TCSCBCHHHHHHHHHHHTSGGG
T ss_pred C-----CCCCcCHHHHHHHHHHHhCchh
Confidence 1 1125678999999999987554
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-17 Score=145.00 Aligned_cols=200 Identities=8% Similarity=0.038 Sum_probs=135.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|+++|+. |++++|+.. .++++... ...++.++.+|+
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~---Vi~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dl 85 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLG---VVIADLAAE------KGKALADE------------LGNRAEFVSTNV 85 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH------------HCTTEEEEECCT
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCChH------HHHHHHHH------------hCCceEEEEcCC
Confidence 367899999999999999999999999987 889999642 22222111 025789999999
Q ss_pred CCCCCCCCHHHHHHHhc------cccEEEEc-ceeccc------------cccHHHHHhhhHHHHHHHHHHHHhc-----
Q psy17679 121 SLPGLGLSETDRATLVK------QVNIVFHG-AATVRF------------DEHIKMAVKINVCGVQAMLQLAREM----- 176 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~------~~dvVi~~-a~~~~~------------~~~~~~~~~~N~~~~~~ll~~a~~~----- 176 (303)
++.+ ++..+++ ++|++||| |+.... ...+...+++|+.++.++++++...
T Consensus 86 ~~~~------~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 159 (281)
T 3ppi_A 86 TSED------SVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAE 159 (281)
T ss_dssp TCHH------HHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred CCHH------HHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc
Confidence 9976 5555554 68999999 544221 1235788899999999998887643
Q ss_pred ----CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH
Q psy17679 177 ----KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI 246 (303)
Q Consensus 177 ----~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~ 246 (303)
++..+||++||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+.....
T Consensus 160 ~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 227 (281)
T 3ppi_A 160 PRENGERGALVLTASIAGYE------------GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES 227 (281)
T ss_dssp CCTTSCCEEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred ccccCCCeEEEEEecccccC------------CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc
Confidence 1346899999997653 22345667788887777766554433 2 678898775432111
Q ss_pred ---HHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 247 ---GMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 247 ---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.....+... ......+++++|+|++++.++.++
T Consensus 228 ~~~~~~~~~~~~--------~~~~~~~~~pedvA~~v~~l~s~~ 263 (281)
T 3ppi_A 228 VGEEALAKFAAN--------IPFPKRLGTPDEFADAAAFLLTNG 263 (281)
T ss_dssp TCHHHHHHHHHT--------CCSSSSCBCHHHHHHHHHHHHHCS
T ss_pred ccHHHHHHHHhc--------CCCCCCCCCHHHHHHHHHHHHcCC
Confidence 111111111 111145789999999999999754
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.76 E-value=4e-18 Score=152.22 Aligned_cols=205 Identities=10% Similarity=0.052 Sum_probs=135.4
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC-------CcccHHHHH-HHHHHhHHHhhhhccCcCcCC
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK-------KGKDIQERL-DAIFEDRLFWRLRAEVPDFRS 111 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~-------~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~ 111 (303)
..+++|++|||||+|+||+++++.|++.|+. |++++|+. ......+.+ +++... ..
T Consensus 23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~---Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 86 (322)
T 3qlj_A 23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGAR---VVVNDIGVGLDGSPASGGSAAQSVVDEITAA-------------GG 86 (322)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECCCBCTTSSBTCTTSHHHHHHHHHHHT-------------TC
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCcccccccccccHHHHHHHHHHHHhc-------------CC
Confidence 3477899999999999999999999999987 88888861 111122222 222111 25
Q ss_pred ceEEEEecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-
Q psy17679 112 KVSAVAGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM- 176 (303)
Q Consensus 112 ~v~~~~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~- 176 (303)
++.++.+|++|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++...
T Consensus 87 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~ 160 (322)
T 3qlj_A 87 EAVADGSNVADWD------QAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYW 160 (322)
T ss_dssp EEEEECCCTTSHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 7889999999976 5555554 78999999998542 2345678999999999998887543
Q ss_pred ---C-----CCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCc
Q psy17679 177 ---K-----DLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNV 242 (303)
Q Consensus 177 ---~-----~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~ 242 (303)
+ ...+||++||..+.. +......|..+|...+.+.+.++..+ . +.+.|| +.+.
T Consensus 161 ~~~~~~~~~~~g~IV~isS~~~~~------------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~ 227 (322)
T 3qlj_A 161 RGLSKAGKAVDGRIINTSSGAGLQ------------GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTR 227 (322)
T ss_dssp HHHHHTTCCCCEEEEEECCHHHHH------------CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSC
T ss_pred HHccccCCCCCcEEEEEcCHHHcc------------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCc
Confidence 0 015999999985542 22245568888888888877665443 2 678898 4322
Q ss_pred cChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 243 YGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 243 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..... .............++.++|+|+++++++....
T Consensus 228 ~~~~~---------~~~~~~~~~~~~~~~~pedva~~v~~L~s~~~ 264 (322)
T 3qlj_A 228 MTETV---------FAEMMATQDQDFDAMAPENVSPLVVWLGSAEA 264 (322)
T ss_dssp CSCCS---------CCC--------CCTTCGGGTHHHHHHHTSGGG
T ss_pred cchhh---------hhhhhhccccccCCCCHHHHHHHHHHHhCccc
Confidence 21100 00001111223456789999999999987554
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=2e-17 Score=146.18 Aligned_cols=214 Identities=11% Similarity=0.097 Sum_probs=135.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+|+||||+|+||+++++.|++.|++ |++++|+.... .+..+++... ..+....++.++.+|+
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~---V~~~~r~~~~~--~~~~~~l~~~--------~~~~~~~~~~~~~~D~ 81 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGSN---VVIASRKLERL--KSAADELQAN--------LPPTKQARVIPIQCNI 81 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHT--------SCTTCCCCEEEEECCT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHhh--------ccccCCccEEEEecCC
Confidence 467899999999999999999999999987 88999974211 1111111110 0001125789999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
++.+ ++..+++ ++|+||||||.... ...+...+++|+.++.++++++.+. .+..+||
T Consensus 82 ~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv 155 (303)
T 1yxm_A 82 RNEE------EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIV 155 (303)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEE
Confidence 9876 5666554 59999999996421 2335678899999999999988662 1347899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||.. .. +......|..+|...+.+.+.+...+ . ++++||++.+....... ........
T Consensus 156 ~isS~~-~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~ 221 (303)
T 1yxm_A 156 NIIVPT-KA------------GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENY-GSWGQSFF 221 (303)
T ss_dssp EECCCC-TT------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTS-GGGGGGGG
T ss_pred EEEeec-cc------------CCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhc-cccchHHH
Confidence 999986 21 12233456677777777776554433 2 78889876443110000 00000000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..... ......+++++|+|++++.++....
T Consensus 222 ~~~~~-~~p~~~~~~~~dvA~~i~~l~~~~~ 251 (303)
T 1yxm_A 222 EGSFQ-KIPAKRIGVPEEVSSVVCFLLSPAA 251 (303)
T ss_dssp TTGGG-GSTTSSCBCTHHHHHHHHHHHSGGG
T ss_pred HHHHh-cCcccCCCCHHHHHHHHHHHhCccc
Confidence 01110 0111247899999999999987543
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.1e-17 Score=141.10 Aligned_cols=204 Identities=13% Similarity=0.108 Sum_probs=132.4
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.|+ |++|||||+|+||+++++.|++.|+. |++++|+.. .++++... +.. ..++.++.+|+
T Consensus 19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~---V~~~~r~~~------~~~~~~~~-----~~~-----~~~~~~~~~Dv 78 (272)
T 2nwq_A 19 HMS-STLFITGATSGFGEACARRFAEAGWS---LVLTGRREE------RLQALAGE-----LSA-----KTRVLPLTLDV 78 (272)
T ss_dssp --C-CEEEESSTTTSSHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----HTT-----TSCEEEEECCT
T ss_pred CcC-cEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-----hhc-----CCcEEEEEcCC
Confidence 345 89999999999999999999999987 889999642 22222111 000 13788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCc-e
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLK-A 181 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~-r 181 (303)
+|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. .+.. +
T Consensus 79 ~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~ 152 (272)
T 2nwq_A 79 RDRA------AMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGAS 152 (272)
T ss_dssp TCHH------HHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 9976 6666665 46999999997432 2345678999999988877766532 1456 9
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhh
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATG 255 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~ 255 (303)
||++||..+.. +......|..+|...+.+.+.+...+ . ++++||++.+.+........ ..
T Consensus 153 IV~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~--~~ 218 (272)
T 2nwq_A 153 IVNLGSVAGKW------------PYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGD--QA 218 (272)
T ss_dssp EEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---------------
T ss_pred EEEeCCchhcc------------CCCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccc--hH
Confidence 99999996643 22234568888888888888765443 2 78889977544321110000 00
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....+. ...++..+|+|+++++++..+.
T Consensus 219 ~~~~~~~----~~~~~~pedvA~~v~~l~s~~~ 247 (272)
T 2nwq_A 219 RYDKTYA----GAHPIQPEDIAETIFWIMNQPA 247 (272)
T ss_dssp -----------CCCCBCHHHHHHHHHHHHTSCT
T ss_pred HHHHhhc----cCCCCCHHHHHHHHHHHhCCCc
Confidence 0000010 1124789999999999998543
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-17 Score=143.17 Aligned_cols=199 Identities=9% Similarity=0.065 Sum_probs=133.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+|+||+++++.|+++|+. |++++|+... .+.+.+.+.. ....+..++.+|+
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~~~-----------~~~~~~~~~~~d~ 73 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGAS---VVLLGRTEAS---LAEVSDQIKS-----------AGQPQPLIIALNL 73 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHH-----------TTSCCCEEEECCT
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEecCHHH---HHHHHHHHHh-----------cCCCCceEEEecc
Confidence 467899999999999999999999999987 8899997432 1111111110 1124677888887
Q ss_pred --CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCc
Q psy17679 121 --SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLK 180 (303)
Q Consensus 121 --~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~ 180 (303)
++.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ++..
T Consensus 74 d~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ 147 (247)
T 3i1j_A 74 ENATAQ------QYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDA 147 (247)
T ss_dssp TTCCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSE
T ss_pred ccCCHH------HHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC
Confidence 5443 4444443 78999999997421 2345678899999999999888532 2567
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC-----Cc--EEeecceecCccChHHHHHHHH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN-----RV--HISGTGWIDNVYGPIGMLVGIA 253 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~-----~~--~ii~pg~~~~~~g~~~~~~~~~ 253 (303)
+||++||..+.. +......|..+|...+.+.+.+... .. +.+.||++.+... ....
T Consensus 148 ~iv~isS~~~~~------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~-----~~~~ 210 (247)
T 3i1j_A 148 SIAFTSSSVGRK------------GRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMR-----AQAY 210 (247)
T ss_dssp EEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHH-----HHHS
T ss_pred eEEEEcchhhcC------------CCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccc-----hhcc
Confidence 999999996653 2234556778888777777655432 22 6778987644321 1111
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.......+...+|+|++++.++....
T Consensus 211 ---------~~~~~~~~~~p~dva~~~~~l~s~~~ 236 (247)
T 3i1j_A 211 ---------PDENPLNNPAPEDIMPVYLYLMGPDS 236 (247)
T ss_dssp ---------TTSCGGGSCCGGGGTHHHHHHHSGGG
T ss_pred ---------cccCccCCCCHHHHHHHHHHHhCchh
Confidence 11222346789999999999987543
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.75 E-value=9.7e-19 Score=150.05 Aligned_cols=203 Identities=15% Similarity=0.098 Sum_probs=120.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|.+ |+. |++++|++. .++++.. ..++.++.+|++
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g~~---v~~~~r~~~------~~~~~~~--------------~~~~~~~~~D~~ 58 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-DHI---VYALGRNPE------HLAALAE--------------IEGVEPIESDIV 58 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-TSE---EEEEESCHH------HHHHHHT--------------STTEEEEECCHH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-CCe---EEEEeCCHH------HHHHHHh--------------hcCCcceecccc
Confidence 4678999999999999999999987 775 888998642 2222211 146889999988
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEEeCCcccC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVHVSTAFTHC 192 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~iSS~~~~~ 192 (303)
+........+....+.++|++|||||.... ...+...+++|+.++..+++++.+. ....+||++||..+..
T Consensus 59 ~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~ 138 (245)
T 3e9n_A 59 KEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNG 138 (245)
T ss_dssp HHHHTSSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC------
T ss_pred hHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCccccc
Confidence 752100000111223479999999998542 2235678899999988888777542 0126899999996543
Q ss_pred CCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhhhccCCCCc
Q psy17679 193 PRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNT 266 (303)
Q Consensus 193 ~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 266 (303)
+......|..+|...+.+.+.+...+ . +.+.||++.+..... ..... +....
T Consensus 139 ------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~~~~-----~~~~~ 196 (245)
T 3e9n_A 139 ------------PHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG-----LMDSQ-----GTNFR 196 (245)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------C
T ss_pred ------------CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh-----hhhhh-----hcccc
Confidence 22345678888888888887665432 2 778898764433111 11000 01112
Q ss_pred cccceehhHHHHHHHHHHhhcccC
Q psy17679 267 VTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 267 ~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
...+++++|+|++++.++..+...
T Consensus 197 ~~~~~~p~dvA~~i~~l~~~~~~~ 220 (245)
T 3e9n_A 197 PEIYIEPKEIANAIRFVIDAGETT 220 (245)
T ss_dssp CGGGSCHHHHHHHHHHHHTSCTTE
T ss_pred cccCCCHHHHHHHHHHHHcCCCcc
Confidence 234789999999999999877543
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.75 E-value=5.9e-17 Score=142.28 Aligned_cols=203 Identities=8% Similarity=0.048 Sum_probs=133.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC-CcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK-KGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~-~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
.+++|+++||||+|+||+++++.|++.|+. |++++|+. .. .+.+.+.+.. ....++.++.+|
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~---V~~~~r~~~~~---~~~~~~~l~~-----------~~~~~~~~~~~D 82 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYR---VVIHYHNSAEA---AVSLADELNK-----------ERSNTAVVCQAD 82 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTCE---EEEEESSCHHH---HHHHHHHHHH-----------HSTTCEEEEECC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCe---EEEEeCCchHH---HHHHHHHHHh-----------hcCCceEEEEee
Confidence 467899999999999999999999999987 88999975 21 1111111110 012578899999
Q ss_pred CCC----CCCCCCHHHHHHHhc-------cccEEEEcceeccc---------c--------ccHHHHHhhhHHHHHHHHH
Q psy17679 120 CSL----PGLGLSETDRATLVK-------QVNIVFHGAATVRF---------D--------EHIKMAVKINVCGVQAMLQ 171 (303)
Q Consensus 120 l~d----~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~---------~--------~~~~~~~~~N~~~~~~ll~ 171 (303)
+++ .+ ++..+++ ++|++|||||.... . ..+...+++|+.++..+++
T Consensus 83 v~~~~~~~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 156 (288)
T 2x9g_A 83 LTNSNVLPA------SCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTM 156 (288)
T ss_dssp CSCSTTHHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHH
T ss_pred cCCccCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHH
Confidence 999 44 4444443 78999999997431 1 2345688999999999988
Q ss_pred HHHhc---CC------CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeec
Q psy17679 172 LAREM---KD------LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGT 236 (303)
Q Consensus 172 ~a~~~---~~------~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~p 236 (303)
++.+. .+ ..+||++||..+.. +......|..+|...+.+.+.+...+ . ++++|
T Consensus 157 ~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P 224 (288)
T 2x9g_A 157 SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQ------------PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAP 224 (288)
T ss_dssp HHHHHC--------CCCEEEEEECCTTTTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred HHHHHHhhcCCCCCCCCeEEEEEecccccC------------CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEe
Confidence 88654 12 46999999996643 22345667788877777766554332 3 78889
Q ss_pred ceecCccC-hHHHHHHHHhhhhhhccCCCCccccc-eehhHHHHHHHHHHhhc
Q psy17679 237 GWIDNVYG-PIGMLVGIATGVLHTHLINLNTVTDM-VPVDLVVNSMISIAWSI 287 (303)
Q Consensus 237 g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~ai~~~~~~~ 287 (303)
|++.+... .......+.. ..+ ...+ ...+|+|+++++++...
T Consensus 225 G~v~t~~~~~~~~~~~~~~----~~p-----~~r~~~~pedvA~~v~~l~s~~ 268 (288)
T 2x9g_A 225 GVSLLPVAMGEEEKDKWRR----KVP-----LGRREASAEQIADAVIFLVSGS 268 (288)
T ss_dssp SSCSCCTTSCHHHHHHHHH----TCT-----TTSSCCCHHHHHHHHHHHHSGG
T ss_pred ccccCccccChHHHHHHHh----hCC-----CCCCCCCHHHHHHHHHHHhCcc
Confidence 97755441 0011111111 111 1124 68999999999998754
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=146.09 Aligned_cols=207 Identities=13% Similarity=0.132 Sum_probs=134.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+|+||+++++.|+++|+. |++++|+.. .++++... ...++.++.+|++
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dv~ 61 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGAR---VAVLDKSAE------RLRELEVA------------HGGNAVGVVGDVR 61 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH------------TBTTEEEEECCTT
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcCE---EEEEeCCHH------HHHHHHHH------------cCCcEEEEEcCCC
Confidence 56799999999999999999999999987 888998632 22222211 1257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceecccc------------ccHHHHHhhhHHHHHHHHHHHHhc--CCCc
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRFD------------EHIKMAVKINVCGVQAMLQLAREM--KDLK 180 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~------------~~~~~~~~~N~~~~~~ll~~a~~~--~~~~ 180 (303)
+.+ ++..+++ ++|++|||||..... ..+...+++|+.++..+++++.+. ....
T Consensus 62 ~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g 135 (281)
T 3zv4_A 62 SLQ------DQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRG 135 (281)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 976 4554443 689999999974321 135678899999999999888653 1226
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecceecCccChHH---HHHHH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGWIDNVYGPIG---MLVGI 252 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~~~~~~g~~~---~~~~~ 252 (303)
++|++||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+...... .....
T Consensus 136 ~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~ 203 (281)
T 3zv4_A 136 SVVFTISNAGFY------------PNGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQS 203 (281)
T ss_dssp EEEEECCGGGTS------------SSSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC-----
T ss_pred eEEEEecchhcc------------CCCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCccccccccccccc
Confidence 999999996643 22344567788877777776654332 3 7788998755432100 00000
Q ss_pred Hhh-hhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 253 ATG-VLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 253 ~~~-~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
... .....+........+...+|+|+++++++..+
T Consensus 204 ~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~ 239 (281)
T 3zv4_A 204 ISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRG 239 (281)
T ss_dssp ---CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTT
T ss_pred ccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhccc
Confidence 000 00000000111234678999999999999743
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-17 Score=145.88 Aligned_cols=199 Identities=15% Similarity=0.125 Sum_probs=133.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|++ |++++|++. .++++... ..++.++.+|++
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~------~~~~~~~~-------------~~~~~~~~~Dv~ 64 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGAR---VVICDKDES------GGRALEQE-------------LPGAVFILCDVT 64 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-------------CTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHH-------------hcCCeEEEcCCC
Confidence 57799999999999999999999999987 888998642 22222111 135788999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~ 184 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++.++++++.+. .+..+||+
T Consensus 65 d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~ 138 (270)
T 1yde_A 65 QED------DVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVIN 138 (270)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEE
Confidence 976 5555554 78999999997532 1235678899999999999888642 12479999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHH------HHHHH
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIG------MLVGI 252 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~------~~~~~ 252 (303)
+||..+... ......|..+|...+.+.+.+... .. ++++||++.+...... .....
T Consensus 139 isS~~~~~~------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~ 206 (270)
T 1yde_A 139 ISSLVGAIG------------QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASI 206 (270)
T ss_dssp ECCHHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHH
T ss_pred EcCccccCC------------CCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHH
Confidence 999854321 123456778888888887766533 22 7888987644321100 00000
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
.... ... ....+...+|+|++++.++..
T Consensus 207 ~~~~-~~~-----p~~r~~~p~dva~~v~~L~s~ 234 (270)
T 1yde_A 207 REGM-LAQ-----PLGRMGQPAEVGAAAVFLASE 234 (270)
T ss_dssp HHHH-HTS-----TTSSCBCHHHHHHHHHHHHHH
T ss_pred HHHh-hcC-----CCCCCcCHHHHHHHHHHHccc
Confidence 0000 001 112367899999999998875
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.75 E-value=8.5e-17 Score=138.74 Aligned_cols=198 Identities=15% Similarity=0.109 Sum_probs=132.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+++||||+|+||++++++|++.|... .|++..|+.. .++++.... ..++.++.+|++|.
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~------~~~~~~~~~------------~~~~~~~~~Dv~~~ 62 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEA------PLKKLKEKY------------GDRFFYVVGDITED 62 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHH------HHHHHHHHH------------GGGEEEEESCTTSH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHH------HHHHHHHHh------------CCceEEEECCCCCH
Confidence 5899999999999999999999996432 3778888632 222222110 15788999999997
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEE
Q psy17679 124 GLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHV 185 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~i 185 (303)
+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. ++ .+||++
T Consensus 63 ~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~i 135 (254)
T 3kzv_A 63 S------VLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFV 135 (254)
T ss_dssp H------HHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEE
T ss_pred H------HHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEE
Confidence 6 5555554 78999999997432 2345678999999999998888432 13 799999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC--c--EEeecceecCccCh------------HHHH
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR--V--HISGTGWIDNVYGP------------IGML 249 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~--~--~ii~pg~~~~~~g~------------~~~~ 249 (303)
||..+.. +......|..+|...+.+.+.+...+ . +.+.||++.+.... ....
T Consensus 136 sS~~~~~------------~~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~ 203 (254)
T 3kzv_A 136 SSDACNM------------YFSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQL 203 (254)
T ss_dssp CCSCCCC------------SSCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHH
T ss_pred cCchhcc------------CCCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHH
Confidence 9996543 23345678888888888887665433 2 78889977544321 1111
Q ss_pred HHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 250 VGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+.... ....+.+.+|+|+++++++....
T Consensus 204 ~~~~~~~---------~~~r~~~p~dva~~v~~L~s~~~ 233 (254)
T 3kzv_A 204 KMFRGLK---------ENNQLLDSSVPATVYAKLALHGI 233 (254)
T ss_dssp HHHHHHH---------TTC----CHHHHHHHHHHHHHCC
T ss_pred HHHHHHH---------hcCCcCCcccHHHHHHHHHhhcc
Confidence 1111111 11246899999999999998763
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=7.8e-17 Score=137.89 Aligned_cols=193 Identities=12% Similarity=0.149 Sum_probs=130.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+||||||+++||+++++.|++.|+. |.+++|++. .++++.+. ..++.++.+|++|+
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~---V~~~~~~~~------~~~~~~~~-------------~~~~~~~~~Dv~~~ 59 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDK---VCFIDIDEK------RSADFAKE-------------RPNLFYFHGDVADP 59 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHTT-------------CTTEEEEECCTTSH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHHHh-------------cCCEEEEEecCCCH
Confidence 489999999999999999999999998 888888632 22222211 25788999999997
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEEeC
Q psy17679 124 GLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVHVST 187 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~iSS 187 (303)
+ ++..+++ ++|++|||||.... .+.|...+++|+.++..+.+++.+. .+..++|++||
T Consensus 60 ~------~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS 133 (247)
T 3ged_A 60 L------TLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIAS 133 (247)
T ss_dssp H------HHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred H------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEee
Confidence 6 4554443 78999999997532 3456789999999998888777543 13369999999
Q ss_pred CcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecceecCccChHHHHHHHHhhhhhhccC
Q psy17679 188 AFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGWIDNVYGPIGMLVGIATGVLHTHLI 262 (303)
Q Consensus 188 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~ 262 (303)
..+... ......|..+|.....+.+.++..+ . +.+.||++.+...+. ....... .++
T Consensus 134 ~~~~~~------------~~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~-~~~~~~~----~~P- 195 (247)
T 3ged_A 134 TRAFQS------------EPDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE-FTQEDCA----AIP- 195 (247)
T ss_dssp GGGTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC----CCHHHHH----TST-
T ss_pred cccccC------------CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH-HHHHHHh----cCC-
Confidence 976532 2233456666666665555443322 2 788899875543221 1111111 111
Q ss_pred CCCccccceehhHHHHHHHHHHhh
Q psy17679 263 NLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 263 ~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
..-+...+|+|+++++++..
T Consensus 196 ----l~R~g~pediA~~v~fL~s~ 215 (247)
T 3ged_A 196 ----AGKVGTPKDISNMVLFLCQQ 215 (247)
T ss_dssp ----TSSCBCHHHHHHHHHHHHHC
T ss_pred ----CCCCcCHHHHHHHHHHHHhC
Confidence 11256889999999999863
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=1e-16 Score=144.35 Aligned_cols=200 Identities=13% Similarity=0.134 Sum_probs=137.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCccc-----HHHHHHHHHHhHHHhhhhccCcCcCCceEE
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKD-----IQERLDAIFEDRLFWRLRAEVPDFRSKVSA 115 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~-----~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~ 115 (303)
.+++|+||||||+|+||++++++|++.|+. |++++|+..... ..+..+++.. ...++.+
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~---Vvl~~r~~~~~~~l~~~l~~~~~~~~~-------------~g~~~~~ 105 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGAN---IVIAAKTAQPHPKLLGTIYTAAEEIEA-------------VGGKALP 105 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCE---EEEEESCCSCCSSSCCCHHHHHHHHHH-------------TTCEEEE
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCCE---EEEEECChhhhhhhHHHHHHHHHHHHh-------------cCCeEEE
Confidence 467899999999999999999999999987 889999865321 1111222211 1257889
Q ss_pred EEecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC
Q psy17679 116 VAGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD 178 (303)
Q Consensus 116 ~~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~ 178 (303)
+.+|++|.+ ++..+++ ++|+||||||.... ...+...+++|+.++..+++++... ++
T Consensus 106 ~~~Dv~d~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~ 179 (346)
T 3kvo_A 106 CIVDVRDEQ------QISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK 179 (346)
T ss_dssp EECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS
T ss_pred EEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC
Confidence 999999976 5555554 79999999997542 2345778999999999999988543 25
Q ss_pred CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecce-ecCccChHHHHHHH
Q psy17679 179 LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGW-IDNVYGPIGMLVGI 252 (303)
Q Consensus 179 ~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~-~~~~~g~~~~~~~~ 252 (303)
..+||++||..+.... +......|..+|...+.+.+.+...+ . +.+.||. +.+. +...
T Consensus 180 ~g~IV~iSS~~~~~~~----------~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~-----~~~~- 243 (346)
T 3kvo_A 180 VAHILNISPPLNLNPV----------WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA-----AMDM- 243 (346)
T ss_dssp SCEEEEECCCCCCCGG----------GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH-----HHHH-
T ss_pred CCEEEEECCHHHcCCC----------CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH-----HHHh-
Confidence 6799999998654210 12345667788887777776554432 2 6777884 3221 1111
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
.. .......+...+|+|++++.++..
T Consensus 244 ~~--------~~~~~~r~~~pedvA~~v~~L~s~ 269 (346)
T 3kvo_A 244 LG--------GPGIESQCRKVDIIADAAYSIFQK 269 (346)
T ss_dssp HC--------C--CGGGCBCTHHHHHHHHHHHTS
T ss_pred hc--------cccccccCCCHHHHHHHHHHHHhc
Confidence 11 111223467899999999999986
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1e-16 Score=138.59 Aligned_cols=200 Identities=16% Similarity=0.131 Sum_probs=132.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+++||+++++.|.+.|+. |++.+|+.... .....++.+|++
T Consensus 9 L~GK~alVTGas~GIG~aia~~la~~Ga~---V~~~~r~~~~~-------------------------~~~~~~~~~Dv~ 60 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFLELGAQ---VLTTARARPEG-------------------------LPEELFVEADLT 60 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHHHTTCE---EEEEESSCCTT-------------------------SCTTTEEECCTT
T ss_pred CCCCEEEEeccCcHHHHHHHHHHHHcCCE---EEEEECCchhC-------------------------CCcEEEEEcCCC
Confidence 78999999999999999999999999997 88999975421 134457899999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc---------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF---------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAF 182 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~---------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~ 182 (303)
+.+ ++..+++ ++|++|||||.... ...|...+++|+.++..+.+++.+. ++..+|
T Consensus 61 ~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~I 134 (261)
T 4h15_A 61 TKE------GCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVV 134 (261)
T ss_dssp SHH------HHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceE
Confidence 976 4444433 78999999996321 2346788999999998887777543 256799
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHh--
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIAT-- 254 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~-- 254 (303)
|++||..+.... | .....|..+|...+.+.+.++..+ . +.+.||++.+...... ......
T Consensus 135 v~isS~~~~~~~----------~-~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~-~~~~~~~~ 202 (261)
T 4h15_A 135 VHVTSIQRVLPL----------P-ESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRL-AERLAKQA 202 (261)
T ss_dssp EEECCGGGTSCC----------T-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH-HHHHHHHT
T ss_pred EEEEehhhccCC----------C-CccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhh-hHHHHHhh
Confidence 999999664321 1 123456677776666666554433 3 7888998765432211 110000
Q ss_pred h--------hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 G--------VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~--------~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+ ....... .....-+...+|+|+++++++...+
T Consensus 203 ~~~~~~~~~~~~~~~~-~~PlgR~g~peevA~~v~fLaS~~a 243 (261)
T 4h15_A 203 GTDLEGGKKIIMDGLG-GIPLGRPAKPEEVANLIAFLASDRA 243 (261)
T ss_dssp TCCHHHHHHHHHHHTT-CCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred ccchhhHHHHHHHHhc-CCCCCCCcCHHHHHHHHHHHhCchh
Confidence 0 0000000 0111236789999999999887544
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.74 E-value=9.3e-18 Score=141.91 Aligned_cols=185 Identities=9% Similarity=-0.009 Sum_probs=128.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|+. |++++|+. . +|++
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~------------------------------~-----~D~~ 45 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEHTI---VHVASRQT------------------------------G-----LDIS 45 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTTEE---EEEESGGG------------------------------T-----CCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEecCCc------------------------------c-----cCCC
Confidence 56789999999999999999999999987 88888852 1 7888
Q ss_pred CCCCCCCHHHHHHHhc---cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeCCc
Q psy17679 122 LPGLGLSETDRATLVK---QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVSTAF 189 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~---~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS~~ 189 (303)
|.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+. .+..+||++||..
T Consensus 46 ~~~------~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~ 119 (223)
T 3uce_A 46 DEK------SVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGML 119 (223)
T ss_dssp CHH------HHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGG
T ss_pred CHH------HHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchh
Confidence 866 5666554 79999999997521 2345678899999999999999875 1234899999996
Q ss_pred ccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC--c--EEeecceecCccChH---HHHHHHHhhhhhhccC
Q psy17679 190 THCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR--V--HISGTGWIDNVYGPI---GMLVGIATGVLHTHLI 262 (303)
Q Consensus 190 ~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~--~--~ii~pg~~~~~~g~~---~~~~~~~~~~~~~~~~ 262 (303)
+.. +......|..+|...+.+.+.+...+ . +.+.||++.+..... .............
T Consensus 120 ~~~------------~~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--- 184 (223)
T 3uce_A 120 SRK------------VVANTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSH--- 184 (223)
T ss_dssp GTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHH---
T ss_pred hcc------------CCCCchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhc---
Confidence 643 22345567788887777776654433 2 788899775543211 1111111111111
Q ss_pred CCCccccceehhHHHHHHHHHHhhc
Q psy17679 263 NLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 263 ~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.....+.+++|+|++++.++..+
T Consensus 185 --~~~~~~~~~~dvA~~~~~l~~~~ 207 (223)
T 3uce_A 185 --LPVGKVGEASDIAMAYLFAIQNS 207 (223)
T ss_dssp --STTCSCBCHHHHHHHHHHHHHCT
T ss_pred --CCCCCccCHHHHHHHHHHHccCC
Confidence 11234678999999999998743
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=7.5e-17 Score=144.28 Aligned_cols=209 Identities=14% Similarity=0.060 Sum_probs=135.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEe-CCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLV-RPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~-R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++|++|||||+|+||+++++.|++.|+. |++++ |+.. .++++... +.. ....++.++.+|+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~---Vv~~~~r~~~------~~~~~~~~-----l~~---~~~~~~~~~~~Dl 106 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYA---VCLHYHRSAA------EANALSAT-----LNA---RRPNSAITVQADL 106 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH------HHHHHHHH-----HHH---HSTTCEEEEECCC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEcCCCHH------HHHHHHHH-----HHh---hcCCeEEEEEeeC
Confidence 56789999999999999999999999987 88888 8632 12111110 000 0014788999999
Q ss_pred CCCCC-----------CCCHHHHHHHh-------ccccEEEEcceeccc---------------------cccHHHHHhh
Q psy17679 121 SLPGL-----------GLSETDRATLV-------KQVNIVFHGAATVRF---------------------DEHIKMAVKI 161 (303)
Q Consensus 121 ~d~~~-----------~~~~~~~~~~~-------~~~dvVi~~a~~~~~---------------------~~~~~~~~~~ 161 (303)
++.+. .....++..++ ..+|++|||||.... ...+...+++
T Consensus 107 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~v 186 (328)
T 2qhx_A 107 SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGS 186 (328)
T ss_dssp SSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHH
T ss_pred CCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHH
Confidence 98750 00001233333 379999999997431 2345678899
Q ss_pred hHHHHHHHHHHHHhc---CC------CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC--
Q psy17679 162 NVCGVQAMLQLAREM---KD------LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR-- 230 (303)
Q Consensus 162 N~~~~~~ll~~a~~~---~~------~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~-- 230 (303)
|+.++..+++++.+. .+ ..+||++||..+.. +......|..+|...+.+.+.+...+
T Consensus 187 N~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~------------~~~~~~~Y~asKaal~~l~~~la~el~~ 254 (328)
T 2qhx_A 187 NAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ------------PLLGYTIYTMAKGALEGLTRSAALELAP 254 (328)
T ss_dssp HTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhcc------------CCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999998887642 13 57999999996543 22345668888888888877665443
Q ss_pred --c--EEeecceecCccCh-HHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 231 --V--HISGTGWIDNVYGP-IGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 231 --~--~ii~pg~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
. +.+.||++.+.... ......+.. ..+ ....+...+|+|+++++++...
T Consensus 255 ~gIrvn~v~PG~v~T~~~~~~~~~~~~~~----~~p----~~~r~~~pedvA~~v~~l~s~~ 308 (328)
T 2qhx_A 255 LQIRVNGVGPGLSVLVDDMPPAVWEGHRS----KVP----LYQRDSSAAEVSDVVIFLCSSK 308 (328)
T ss_dssp GTEEEEEEEESSBSCCCCSCHHHHHHHHT----TCT----TTTSCBCHHHHHHHHHHHHSGG
T ss_pred cCcEEEEEecCcccCCccccHHHHHHHHh----hCC----CCCCCCCHHHHHHHHHHHhCcc
Confidence 2 78889987655411 111111111 111 0013678999999999998754
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.1e-16 Score=139.03 Aligned_cols=211 Identities=13% Similarity=0.039 Sum_probs=135.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEe-CCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLV-RPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~-R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++|+++||||+|+||+++++.|+++|+. |++++ |+.... .+..+++... ...++.++.+|+
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~~r~~~~~--~~~~~~l~~~------------~~~~~~~~~~Dl 69 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYA---VCLHYHRSAAEA--NALSATLNAR------------RPNSAITVQADL 69 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHHHH--HHHHHHHHHH------------STTCEEEEECCC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEcCCCHHHH--HHHHHHHhhh------------cCCeeEEEEeec
Confidence 66789999999999999999999999987 88888 864211 1111111100 015788999999
Q ss_pred CCCCC-----------CCCHHHHHHHh-------ccccEEEEcceeccc---------------------cccHHHHHhh
Q psy17679 121 SLPGL-----------GLSETDRATLV-------KQVNIVFHGAATVRF---------------------DEHIKMAVKI 161 (303)
Q Consensus 121 ~d~~~-----------~~~~~~~~~~~-------~~~dvVi~~a~~~~~---------------------~~~~~~~~~~ 161 (303)
++.+. ....+++..++ .++|++|||||.... ...+...+++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (291)
T 1e7w_A 70 SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGS 149 (291)
T ss_dssp SSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHH
T ss_pred CCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHH
Confidence 98750 00000233333 379999999997531 2345678899
Q ss_pred hHHHHHHHHHHHHhc---CC------CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC--
Q psy17679 162 NVCGVQAMLQLAREM---KD------LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR-- 230 (303)
Q Consensus 162 N~~~~~~ll~~a~~~---~~------~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~-- 230 (303)
|+.++..+++++.+. .+ ..+||++||..+.. +......|..+|...+.+.+.+...+
T Consensus 150 N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~~ 217 (291)
T 1e7w_A 150 NAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ------------PLLGYTIYTMAKGALEGLTRSAALELAP 217 (291)
T ss_dssp HTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcC------------CCCCCchhHHHHHHHHHHHHHHHHHHHh
Confidence 999999998887642 13 57999999996543 22345667888887877777654432
Q ss_pred --c--EEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 231 --V--HISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 231 --~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. +.+.||++.+.+ . +............+ ....+...+|+|+++++++....
T Consensus 218 ~gI~vn~v~PG~v~T~~-~--~~~~~~~~~~~~~p----~~~r~~~pedvA~~v~~l~s~~~ 272 (291)
T 1e7w_A 218 LQIRVNGVGPGLSVLVD-D--MPPAVWEGHRSKVP----LYQRDSSAAEVSDVVIFLCSSKA 272 (291)
T ss_dssp GTEEEEEEEESSBCCGG-G--SCHHHHHHHHTTCT----TTTSCBCHHHHHHHHHHHHSGGG
T ss_pred cCeEEEEEeeCCccCCc-c--CCHHHHHHHHhhCC----CCCCCCCHHHHHHHHHHHhCCcc
Confidence 2 788899876554 1 10111110000011 00036789999999999987543
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=6e-17 Score=139.98 Aligned_cols=210 Identities=14% Similarity=0.096 Sum_probs=135.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHh---cCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLR---SCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~---~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
+++|+++||||+|+||+++++.|++ .|+. |++++|+.... .+..+++... . ...++.++.+
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~---V~~~~r~~~~~--~~~~~~l~~~---------~--~~~~~~~~~~ 67 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSV---MLVSARSESML--RQLKEELGAQ---------Q--PDLKVVLAAA 67 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCE---EEEEESCHHHH--HHHHHHHHHH---------C--TTSEEEEEEC
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCe---EEEEeCCHHHH--HHHHHHHHhh---------C--CCCeEEEEec
Confidence 5679999999999999999999999 7887 88999964211 1111111110 0 0146889999
Q ss_pred cCCCCCCCCCHHHHHHHhc---------ccc--EEEEcceeccc----------cccHHHHHhhhHHHHHHHHHHHHhc-
Q psy17679 119 DCSLPGLGLSETDRATLVK---------QVN--IVFHGAATVRF----------DEHIKMAVKINVCGVQAMLQLAREM- 176 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~---------~~d--vVi~~a~~~~~----------~~~~~~~~~~N~~~~~~ll~~a~~~- 176 (303)
|+++.+ ++..+++ ++| ++|||||.... ...+...+++|+.++..+++++.+.
T Consensus 68 Dv~~~~------~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 141 (259)
T 1oaa_A 68 DLGTEA------GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAF 141 (259)
T ss_dssp CTTSHH------HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTS
T ss_pred CCCCHH------HHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999976 4544432 458 99999997421 1345678999999999999999765
Q ss_pred --C--CCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc----EEeecceecCccChHHH
Q psy17679 177 --K--DLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV----HISGTGWIDNVYGPIGM 248 (303)
Q Consensus 177 --~--~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~----~ii~pg~~~~~~g~~~~ 248 (303)
+ +..+||++||..+.. +......|..+|...+.+.+.+...+. +.+.||++.+.+... .
T Consensus 142 ~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~-~ 208 (259)
T 1oaa_A 142 QDSPGLSKTVVNISSLCALQ------------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQL-A 208 (259)
T ss_dssp CCCTTCEEEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHH-H
T ss_pred hhccCCCceEEEEcCchhcC------------CCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHH-H
Confidence 1 235799999996653 223456788888888888876654432 677899775443211 0
Q ss_pred HHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 249 LVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
............+........+...+|+|++++.++..
T Consensus 209 ~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~ 246 (259)
T 1oaa_A 209 RETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp HHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHH
T ss_pred hhccCChhHHHHHHHhhhcCCcCCHHHHHHHHHHHHhh
Confidence 00000000000000000012367999999999999874
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-16 Score=141.24 Aligned_cols=204 Identities=14% Similarity=0.133 Sum_probs=133.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+||||||+|+||+++++.|++.|+. |++++|+.... .+.++++.. ....++.++.+|+
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~---V~~~~r~~~~~--~~~~~~l~~------------~~~~~~~~~~~Dl 71 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIM---VVLTCRDVTKG--HEAVEKLKN------------SNHENVVFHQLDV 71 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHT------------TTCCSEEEEECCT
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHh------------cCCCceEEEEccC
Confidence 456799999999999999999999999987 99999974321 122222211 1125789999999
Q ss_pred CCC-CCCCCHHHHHHHh-------ccccEEEEcceeccc-------------------------------------cccH
Q psy17679 121 SLP-GLGLSETDRATLV-------KQVNIVFHGAATVRF-------------------------------------DEHI 155 (303)
Q Consensus 121 ~d~-~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------------------------------------~~~~ 155 (303)
++. + .+..++ .++|++|||||.... ...+
T Consensus 72 ~~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (311)
T 3o26_A 72 TDPIA------TMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELA 145 (311)
T ss_dssp TSCHH------HHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHH
T ss_pred CCcHH------HHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhh
Confidence 997 5 333333 379999999997531 1224
Q ss_pred HHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCCcccCCCCc-----------------------------cccCCC-
Q psy17679 156 KMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTAFTHCPRER-----------------------------IDEEFY- 202 (303)
Q Consensus 156 ~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~~~~~~~~~-----------------------------~~E~~~- 202 (303)
+..+++|+.++..+++++... ++..|||++||..+...... ..+...
T Consensus 146 ~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (311)
T 3o26_A 146 EECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIE 225 (311)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTT
T ss_pred hhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccc
Confidence 567899999999988887643 25579999999955422100 000000
Q ss_pred CCC-CChhhHHHHHHHHHHHHHHhhCcCCc----EEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHH
Q psy17679 203 PVP-LKYENLIQLISETGDEELSEMTPNRV----HISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVV 277 (303)
Q Consensus 203 ~~~-~~~~~~~~~~k~~~E~~~~~~~~~~~----~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 277 (303)
..+ ......|..+|...+.+.+.+...+. +.+.||++.+..... ......++.+
T Consensus 226 ~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~---------------------~~~~~~~~~a 284 (311)
T 3o26_A 226 TNGWPSFGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYG---------------------IGNYTAEEGA 284 (311)
T ss_dssp TTTCCSSCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTT---------------------CCSBCHHHHH
T ss_pred cccCcccchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecCCcCC---------------------CCCCCHHHHH
Confidence 001 12346788888888888887755443 677898775443110 1124677888
Q ss_pred HHHHHHHhhcc
Q psy17679 278 NSMISIAWSIG 288 (303)
Q Consensus 278 ~ai~~~~~~~~ 288 (303)
+.++.++..+.
T Consensus 285 ~~~~~~~~~~~ 295 (311)
T 3o26_A 285 EHVVRIALFPD 295 (311)
T ss_dssp HHHHHHHTCCS
T ss_pred HHHHHHHhCCC
Confidence 88888877554
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.72 E-value=1.3e-16 Score=142.64 Aligned_cols=169 Identities=11% Similarity=0.093 Sum_probs=116.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCccc-HHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKD-IQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~-~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
+|+|+||||+|+||+++++.|++.|+. |+++.|+..... ..+.++.... ......++.++.+|+++
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~---v~~v~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~Dv~d 68 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQ---SFKVYATLRDLKTQGRLWEAARA----------LACPPGSLETLQLDVRD 68 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTC---CEEEEEEESCGGGTHHHHHHHHH----------TTCCTTSEEEEECCTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCc---eEEEEeecCcHHHHHHHHHHhhh----------ccCCCCceEEEEecCCC
Confidence 578999999999999999999999988 556666533221 1111111100 00012478899999999
Q ss_pred CCCCCCHHHHHHHhc-----cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeC
Q psy17679 123 PGLGLSETDRATLVK-----QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVST 187 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~-----~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS 187 (303)
.+ ++..+++ .+|++|||||.... ...+...+++|+.++.++++++... ++..+||++||
T Consensus 69 ~~------~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS 142 (327)
T 1jtv_A 69 SK------SVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGS 142 (327)
T ss_dssp HH------HHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred HH------HHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 76 6777766 48999999997432 2345678999999999999886431 26689999999
Q ss_pred CcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCcc
Q psy17679 188 AFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVY 243 (303)
Q Consensus 188 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~ 243 (303)
..+... ......|..+|...+.+.+.+... .. +++.||++.+.+
T Consensus 143 ~~~~~~------------~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 143 VGGLMG------------LPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp GGGTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred cccccC------------CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence 966432 223456888888888888766543 22 788899875543
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-16 Score=138.45 Aligned_cols=204 Identities=10% Similarity=0.046 Sum_probs=135.7
Q ss_pred ccCCcEEEEeCC--cchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGG--TGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGa--tG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+++|+++|||| +|+||+++++.|++.|+. |++++|+... .++++.. ....++.++.+
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~---V~~~~r~~~~-----~~~~~~~------------~~~~~~~~~~~ 63 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQ---LVLTGFDRLR-----LIQRITD------------RLPAKAPLLEL 63 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCE---EEEEECSCHH-----HHHHHHT------------TSSSCCCEEEC
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCE---EEEEecChHH-----HHHHHHH------------hcCCCceEEEc
Confidence 366799999999 999999999999999987 8888987531 1111111 11246788999
Q ss_pred cCCCCCCCCCHHHHHHHhc----------cccEEEEcceeccc------------cccHHHHHhhhHHHHHHHHHHHHhc
Q psy17679 119 DCSLPGLGLSETDRATLVK----------QVNIVFHGAATVRF------------DEHIKMAVKINVCGVQAMLQLAREM 176 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~----------~~dvVi~~a~~~~~------------~~~~~~~~~~N~~~~~~ll~~a~~~ 176 (303)
|+++.+ ++..+++ ++|++|||||.... ...+...+++|+.++..+++++.+.
T Consensus 64 Dv~~~~------~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 137 (269)
T 2h7i_A 64 DVQNEE------HLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI 137 (269)
T ss_dssp CTTCHH------HHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred cCCCHH------HHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 999976 5555554 79999999997541 2335678899999999999999764
Q ss_pred -CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH--
Q psy17679 177 -KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG-- 247 (303)
Q Consensus 177 -~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~-- 247 (303)
....+||++||.... +...+..|..+|...+.+.+.+...+ . +.+.||++.+......
T Consensus 138 ~~~~g~iv~iss~~~~-------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~ 204 (269)
T 2h7i_A 138 MNPGGSIVGMDFDPSR-------------AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVG 204 (269)
T ss_dssp EEEEEEEEEEECCCSS-------------CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHT
T ss_pred hccCCeEEEEcCcccc-------------ccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhcccc
Confidence 112589999987532 22346678888888888777664432 2 7888997754321100
Q ss_pred -----HH----HHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 248 -----ML----VGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 248 -----~~----~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.. ...........+ ..+.+...+|+|+++++++...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~p----~~rr~~~p~dvA~~v~~L~s~~ 249 (269)
T 2h7i_A 205 GALGEEAGAQIQLLEEGWDQRAP----IGWNMKDATPVAKTVCALLSDW 249 (269)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHCT----TCCCTTCCHHHHHHHHHHHSSS
T ss_pred ccchhhHHHHHHHHHHhhhccCC----cccCCCCHHHHHHHHHHHhCch
Confidence 00 000000000111 1113678899999999998754
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.71 E-value=3e-16 Score=135.56 Aligned_cols=203 Identities=12% Similarity=0.113 Sum_probs=136.6
Q ss_pred cCCcEEEEeCCcc--hhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGTG--FMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGatG--~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+++|+++||||+| +||+++++.|.+.|+. |.+..|++.. .+.+++..+. ....++.++.+|
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~---Vvi~~r~~~~---~~~~~~~~~~-----------~~~~~~~~~~~D 66 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGAK---LVFTYRKERS---RKELEKLLEQ-----------LNQPEAHLYQID 66 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTCE---EEEEESSGGG---HHHHHHHHGG-----------GTCSSCEEEECC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHHh-----------cCCCcEEEEEcc
Confidence 6889999999876 8999999999999997 8889997542 2233332221 012578899999
Q ss_pred CCCCCCCCCHHHHHHHh-------ccccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc-CCCc
Q psy17679 120 CSLPGLGLSETDRATLV-------KQVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM-KDLK 180 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~ 180 (303)
+++.+ ++..++ .++|++|||||.... ...+...+++|+.+...+.+.+... ++..
T Consensus 67 v~~~~------~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G 140 (256)
T 4fs3_A 67 VQSDE------EVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGG 140 (256)
T ss_dssp TTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCE
T ss_pred CCCHH------HHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 99976 454444 379999999997432 1223456678888888887777654 2346
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccCh-----HHHH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGP-----IGML 249 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~-----~~~~ 249 (303)
+||++||..+.. +...+..|..+|.....+.+.++..+ . +.+.||++.+.... ....
T Consensus 141 ~IVnisS~~~~~------------~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~ 208 (256)
T 4fs3_A 141 SIVATTYLGGEF------------AVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTIL 208 (256)
T ss_dssp EEEEEECGGGTS------------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHH
T ss_pred EEEEEecccccc------------CcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHH
Confidence 899999997653 33355677788877777776654443 2 78889987654322 1222
Q ss_pred HHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 250 VGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+....+ + .-+...+|+|+++++++.+.+
T Consensus 209 ~~~~~~~P---l------~R~g~peevA~~v~fL~Sd~a 238 (256)
T 4fs3_A 209 KEIKERAP---L------KRNVDQVEVGKTAAYLLSDLS 238 (256)
T ss_dssp HHHHHHST---T------SSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHhcCC---C------CCCcCHHHHHHHHHHHhCchh
Confidence 22222111 1 124678999999999987543
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.5e-16 Score=146.87 Aligned_cols=205 Identities=18% Similarity=0.174 Sum_probs=142.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCccc-HHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKD-IQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~-~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
...+++||||||+|+||.++++.|.+.|+. +|+++.|+..... ..+..+++.. ...++.++.+|
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~--~vvl~~R~~~~~~~~~~l~~~l~~-------------~g~~v~~~~~D 320 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAE--RLVLTSRRGPEAPGAAELAEELRG-------------HGCEVVHAACD 320 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCS--EEEEEESSGGGSTTHHHHHHHHHT-------------TTCEEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCc--EEEEEecCCcccHHHHHHHHHHHh-------------cCCEEEEEEeC
Confidence 345789999999999999999999999874 3888899754322 1222222211 12578899999
Q ss_pred CCCCCCCCCHHHHHHHhcc--ccEEEEcceecccc-------ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy17679 120 CSLPGLGLSETDRATLVKQ--VNIVFHGAATVRFD-------EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFT 190 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~--~dvVi~~a~~~~~~-------~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~ 190 (303)
++|.+ ++..++++ +|+|||+||..... ..+...+++|+.++.++.+++....+.++||++||..+
T Consensus 321 vtd~~------~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~ 394 (511)
T 2z5l_A 321 VAERD------ALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTG 394 (511)
T ss_dssp SSCHH------HHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGG
T ss_pred CCCHH------HHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHh
Confidence 99976 67888765 99999999986432 23467888999999999998865435689999999955
Q ss_pred cCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc--EEeeccee-cCccChHHHHHHHHhhhhhhccCCCCcc
Q psy17679 191 HCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV--HISGTGWI-DNVYGPIGMLVGIATGVLHTHLINLNTV 267 (303)
Q Consensus 191 ~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 267 (303)
... ......|..+|...+.+.+....... +++.||.+ .+-+........ +. ...
T Consensus 395 ~~g------------~~g~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~~~~-~~----------~~g 451 (511)
T 2z5l_A 395 TWG------------NAGQGAYAAANAALDALAERRRAAGLPATSVAWGLWGGGGMAAGAGEES-LS----------RRG 451 (511)
T ss_dssp TTC------------CTTBHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTCCCCHHHHH-HH----------HHT
T ss_pred cCC------------CCCCHHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccCCcccccccHHH-HH----------hcC
Confidence 422 12346788888889988887654443 78888855 222211111111 11 112
Q ss_pred ccceehhHHHHHHHHHHhhccc
Q psy17679 268 TDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 268 ~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
..+++.+|+++++..++..+..
T Consensus 452 ~~~l~~e~~a~~l~~al~~~~~ 473 (511)
T 2z5l_A 452 LRAMDPDAAVDALLGAMGRNDV 473 (511)
T ss_dssp BCCBCHHHHHHHHHHHHHHTCS
T ss_pred CCCCCHHHHHHHHHHHHhCCCC
Confidence 3468999999999999987643
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.7e-16 Score=137.32 Aligned_cols=208 Identities=10% Similarity=0.041 Sum_probs=130.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|+||+++++.|++.|+. |++++|+.... .+..+++... ..++.++.+|++
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~--~~~~~~~~~~-------------~~~~~~~~~Dv~ 64 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGAT---VYITGRHLDTL--RVVAQEAQSL-------------GGQCVPVVCDSS 64 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHH-------------SSEEEEEECCTT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHHH--HHHHHHHHHc-------------CCceEEEECCCC
Confidence 56789999999999999999999999987 88889864211 1111111110 247889999999
Q ss_pred CCCCCCCHHHHHHHh--------ccccEEEEcce--ec--------c----ccccHHHHHhhhHHHHHHHHHHHHhc---
Q psy17679 122 LPGLGLSETDRATLV--------KQVNIVFHGAA--TV--------R----FDEHIKMAVKINVCGVQAMLQLAREM--- 176 (303)
Q Consensus 122 d~~~~~~~~~~~~~~--------~~~dvVi~~a~--~~--------~----~~~~~~~~~~~N~~~~~~ll~~a~~~--- 176 (303)
|.+ ++..++ .++|++||||| .. . ....+...+++|+.++..+.+++.+.
T Consensus 65 ~~~------~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 138 (260)
T 2qq5_A 65 QES------EVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVP 138 (260)
T ss_dssp SHH------HHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGG
T ss_pred CHH------HHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhh
Confidence 976 444433 35799999994 32 1 12345678889999987777666431
Q ss_pred CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC----Cc--EEeecceecCccChHHHHH
Q psy17679 177 KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN----RV--HISGTGWIDNVYGPIGMLV 250 (303)
Q Consensus 177 ~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~----~~--~ii~pg~~~~~~g~~~~~~ 250 (303)
.+..+||++||..+... . +...|..+|...+.+.+.+... .. ++++||++.+.........
T Consensus 139 ~~~g~iv~isS~~~~~~----------~---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~ 205 (260)
T 2qq5_A 139 AGQGLIVVISSPGSLQY----------M---FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAK 205 (260)
T ss_dssp GTCCEEEEECCGGGTSC----------C---SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC------
T ss_pred cCCcEEEEEcChhhcCC----------C---CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhcc
Confidence 25679999999966431 1 2356788888888887766532 22 7888998765442211100
Q ss_pred HHHhhhhhhccCC-CCccccceehhHHHHHHHHHHhhcc
Q psy17679 251 GIATGVLHTHLIN-LNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 251 ~~~~~~~~~~~~~-~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...... ..... ......+...+|+|+++++++..+.
T Consensus 206 ~~~~~~--~~~~~~~~~~~~~~~pe~va~~v~~l~s~~~ 242 (260)
T 2qq5_A 206 EEVLQD--PVLKQFKSAFSSAETTELSGKCVVALATDPN 242 (260)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHTCTT
T ss_pred ccccch--hHHHHHHhhhccCCCHHHHHHHHHHHhcCcc
Confidence 000000 00000 0001123578999999999987653
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=5e-16 Score=145.91 Aligned_cols=205 Identities=21% Similarity=0.193 Sum_probs=138.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHH-HHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
...+++||||||+|+||.++++.|++.|+. +|++++|+.......+.+ +++... ..++.++.+|
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~--~vvl~~R~~~~~~~~~~l~~~l~~~-------------g~~v~~~~~D 287 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAP--HLLLVSRSGPDADGAGELVAELEAL-------------GARTTVAACD 287 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCS--EEEEEESSGGGSTTHHHHHHHHHHT-------------TCEEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCC--EEEEEcCCCCCcHHHHHHHHHHHhc-------------CCEEEEEEeC
Confidence 345789999999999999999999999874 488889976432212222 222211 2578899999
Q ss_pred CCCCCCCCCHHHHHHHhcc------ccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy17679 120 CSLPGLGLSETDRATLVKQ------VNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVS 186 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~------~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iS 186 (303)
++|.+ ++..++++ +|+|||+||.... ...+...+++|+.++.++.+++... +.++||++|
T Consensus 288 v~d~~------~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~V~~S 360 (486)
T 2fr1_A 288 VTDRE------SVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFS 360 (486)
T ss_dssp TTCHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEE
T ss_pred CCCHH------HHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCCEEEEEc
Confidence 99976 67777764 5999999997542 2234678889999999999999887 789999999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc--EEeecceecCccChHHHHHHHHhhhhhhccCCC
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV--HISGTGWIDNVYGPIGMLVGIATGVLHTHLINL 264 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~ 264 (303)
|..+.... .....|..+|...+.+......... +++.||... ++. +...... ..+ .
T Consensus 361 S~a~~~g~------------~g~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~---~~g-m~~~~~~----~~~--~ 418 (486)
T 2fr1_A 361 SFASAFGA------------PGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWA---GSG-MAEGPVA----DRF--R 418 (486)
T ss_dssp EHHHHTCC------------TTCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC--------------------C--T
T ss_pred ChHhcCCC------------CCCHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeC---CCc-ccchhHH----HHH--H
Confidence 98543211 1123466677777777765544433 788887442 221 1111111 111 1
Q ss_pred CccccceehhHHHHHHHHHHhhccc
Q psy17679 265 NTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 265 ~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.....+++.+|+++++..++..+..
T Consensus 419 ~~g~~~i~~e~~a~~l~~~l~~~~~ 443 (486)
T 2fr1_A 419 RHGVIEMPPETACRALQNALDRAEV 443 (486)
T ss_dssp TTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred hcCCCCCCHHHHHHHHHHHHhCCCC
Confidence 2335679999999999999986543
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=5e-16 Score=133.84 Aligned_cols=205 Identities=13% Similarity=0.064 Sum_probs=123.8
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+++||||+|+||+++++.|+++|+. |++++|+..... .+.++... ..++.++ |..+.
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~~---~~~~l~~~-------------~~~~~~~--d~~~v 59 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHT---VACHDESFKQKD---ELEAFAET-------------YPQLKPM--SEQEP 59 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCE---EEECCGGGGSHH---HHHHHHHH-------------CTTSEEC--CCCSH
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHHHH---HHHHHHhc-------------CCcEEEE--CHHHH
Confidence 368999999999999999999999987 889998754321 22221111 1233333 32221
Q ss_pred CCCCCHHHHHHHhccccEEEEcceec-cc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCCcccC
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATV-RF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTAFTHC 192 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~-~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~~~~~ 192 (303)
. .-...+...+.++|++|||||.. .. ...+...+++|+.++..+++++.+. ++..+||++||..+..
T Consensus 60 ~--~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 137 (254)
T 1zmt_A 60 A--ELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG 137 (254)
T ss_dssp H--HHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS
T ss_pred H--HHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccccc
Confidence 1 00001112223799999999975 21 2345678899999999988887532 1567999999996543
Q ss_pred CCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccC----hHHHHH---HHHhhhhhh
Q psy17679 193 PRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYG----PIGMLV---GIATGVLHT 259 (303)
Q Consensus 193 ~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g----~~~~~~---~~~~~~~~~ 259 (303)
. ......|..+|...+.+.+.+...+ . ++++||++.+... ...+.. .........
T Consensus 138 ~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~ 205 (254)
T 1zmt_A 138 P------------WKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKV 205 (254)
T ss_dssp C------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHH
T ss_pred C------------CCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhcc
Confidence 2 2244567788888888777664432 2 7888997721110 001100 000000001
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+ ...+.+.+|+|++++.++..+.
T Consensus 206 ~p-----~~~~~~p~dvA~~v~~l~s~~~ 229 (254)
T 1zmt_A 206 TA-----LQRLGTQKELGELVAFLASGSC 229 (254)
T ss_dssp SS-----SSSCBCHHHHHHHHHHHHTTSC
T ss_pred CC-----CCCCcCHHHHHHHHHHHhCccc
Confidence 11 1136789999999999987543
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.68 E-value=6.9e-16 Score=143.69 Aligned_cols=204 Identities=12% Similarity=0.044 Sum_probs=134.5
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
..+++++++||||+|+||.++++.|.+.|+. |+++.|+.. .+.++++... .++.++.+|
T Consensus 209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~---Vvl~~r~~~----~~~l~~~~~~--------------~~~~~~~~D 267 (454)
T 3u0b_A 209 KPLDGKVAVVTGAARGIGATIAEVFARDGAT---VVAIDVDGA----AEDLKRVADK--------------VGGTALTLD 267 (454)
T ss_dssp STTTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEECGGG----HHHHHHHHHH--------------HTCEEEECC
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHHCCCE---EEEEeCCcc----HHHHHHHHHH--------------cCCeEEEEe
Confidence 3467899999999999999999999999986 888888643 2223322221 256789999
Q ss_pred CCCCCCCCCHHHHHHHhc-------c-ccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCce
Q psy17679 120 CSLPGLGLSETDRATLVK-------Q-VNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKA 181 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~-~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r 181 (303)
++|.+ ++..+++ + +|+||||||.... ...+...+++|+.++.++.+++... ++..+
T Consensus 268 vtd~~------~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~ 341 (454)
T 3u0b_A 268 VTADD------AVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGR 341 (454)
T ss_dssp TTSTT------HHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCE
T ss_pred cCCHH------HHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCE
Confidence 99988 4555543 3 9999999998642 2345678999999999999998764 14569
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhC----cCCc--EEeecceecCccChHHHHHHHHhh
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMT----PNRV--HISGTGWIDNVYGPIGMLVGIATG 255 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~----~~~~--~ii~pg~~~~~~g~~~~~~~~~~~ 255 (303)
||++||..+... ......|..+|...+.+.+.+. .... +.+.||++.+.+..... .....
T Consensus 342 iV~iSS~a~~~g------------~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~ 407 (454)
T 3u0b_A 342 VIGLSSMAGIAG------------NRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIP--LATRE 407 (454)
T ss_dssp EEEECCHHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------------CH
T ss_pred EEEEeChHhCCC------------CCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcc--hhhHH
Confidence 999999965421 1234567788886666655544 3333 78889977554321110 00000
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..... .....+...+|+|+++++++....
T Consensus 408 ~~~~~----~~l~r~g~pedvA~~v~fL~s~~a 436 (454)
T 3u0b_A 408 VGRRL----NSLFQGGQPVDVAELIAYFASPAS 436 (454)
T ss_dssp HHHHS----BTTSSCBCHHHHHHHHHHHHCGGG
T ss_pred HHHhh----ccccCCCCHHHHHHHHHHHhCCcc
Confidence 00000 111234678999999999887543
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.6e-16 Score=133.94 Aligned_cols=199 Identities=11% Similarity=0.006 Sum_probs=123.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEE-e--CCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLL-V--RPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~-~--R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+|+++||||+|+||+++++.|+++|++ |+++ + |+.. .++++... + .+..+. |.
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~~~~r~~~------~~~~~~~~-----~--------~~~~~~--~~ 56 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYT---VVCHDASFADAA------ERQRFESE-----N--------PGTIAL--AE 56 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCE---EEECCGGGGSHH------HHHHHHHH-----S--------TTEEEC--CC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE---EEEecCCcCCHH------HHHHHHHH-----h--------CCCccc--CH
Confidence 478999999999999999999999987 8888 5 8632 22222111 0 112221 22
Q ss_pred CCCCCCCCHHHHHHHh---ccccEEEEcceeccc----------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 121 SLPGLGLSETDRATLV---KQVNIVFHGAATVRF----------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~---~~~dvVi~~a~~~~~----------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
.+.. ..+..+. .++|++|||||.... ...+...+++|+.++..+++++.+. ++..+||+
T Consensus 57 ~~v~-----~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~ 131 (244)
T 1zmo_A 57 QKPE-----RLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIF 131 (244)
T ss_dssp CCGG-----GHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHH-----HHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 2211 1223332 378999999997533 1345678999999999998887642 25689999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccC---hHHHHHHHHhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYG---PIGMLVGIATG 255 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g---~~~~~~~~~~~ 255 (303)
+||..+... ......|..+|...+.+.+.+...+ . +.+.||++.+.+. ...........
T Consensus 132 isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~ 199 (244)
T 1zmo_A 132 ITSSVGKKP------------LAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRE 199 (244)
T ss_dssp ECCGGGTSC------------CTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHH
T ss_pred ECChhhCCC------------CCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHH
Confidence 999966532 1233457777777777776654332 2 7888998765543 21100000010
Q ss_pred hhh-hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLH-THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~-~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
... ..+ ...+...+|+|++++.++....
T Consensus 200 ~~~~~~p-----~~r~~~pe~vA~~v~~l~s~~~ 228 (244)
T 1zmo_A 200 RVDRDVP-----LGRLGRPDEMGALITFLASRRA 228 (244)
T ss_dssp HHHHHCT-----TCSCBCHHHHHHHHHHHHTTTT
T ss_pred HHhcCCC-----CCCCcCHHHHHHHHHHHcCccc
Confidence 000 111 1136789999999999987543
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.4e-15 Score=134.01 Aligned_cols=193 Identities=9% Similarity=0.094 Sum_probs=125.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC------cccHHHH-HHHHHHhHHHhhhhccCcCcCCceE
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK------GKDIQER-LDAIFEDRLFWRLRAEVPDFRSKVS 114 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~------~~~~~~~-l~~l~~~~~~~~~~~~~~~~~~~v~ 114 (303)
+++|+++||||+|+||+++++.|++.|+. |++.+|... .....+. .+++.. ...
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~---Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~---------------~~~- 67 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGAL---VVVNDLGGDFKGVGKGSSAADKVVEEIRR---------------RGG- 67 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECCCBCTTSCBCCSHHHHHHHHHHHH---------------TTC-
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEcCCcccccccCCHHHHHHHHHHHHh---------------hCC-
Confidence 56799999999999999999999999987 777655321 1111111 122211 111
Q ss_pred EEEecCCCCCCCCCHHHHHHH-------hccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---C
Q psy17679 115 AVAGDCSLPGLGLSETDRATL-------VKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---K 177 (303)
Q Consensus 115 ~~~~Dl~d~~~~~~~~~~~~~-------~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~ 177 (303)
...+|+++.. ++..+ +.++|++|||||.... ...++..+++|+.++..+++++.+. .
T Consensus 68 ~~~~D~~~~~------~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 141 (319)
T 1gz6_A 68 KAVANYDSVE------AGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ 141 (319)
T ss_dssp EEEEECCCGG------GHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 2357988865 33333 3379999999997532 2345778999999998888887432 1
Q ss_pred CCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHH
Q psy17679 178 DLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVG 251 (303)
Q Consensus 178 ~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~ 251 (303)
+..|||++||..+... ......|..+|...+.+.+.+...+ . +.+.||++.+... .
T Consensus 142 ~~grIV~vsS~~~~~~------------~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~t~~~~-~----- 203 (319)
T 1gz6_A 142 NYGRIIMTASASGIYG------------NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTE-T----- 203 (319)
T ss_dssp TCEEEEEECCHHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTG-G-----
T ss_pred CCCEEEEECChhhccC------------CCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCcccccc-c-----
Confidence 5689999999844321 1134567888888888777664432 2 7888986522111 0
Q ss_pred HHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 252 IATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
. . +.....++..+|+|.++++++..+
T Consensus 204 ----~----~--~~~~~~~~~p~dvA~~~~~l~s~~ 229 (319)
T 1gz6_A 204 ----V----M--PEDLVEALKPEYVAPLVLWLCHES 229 (319)
T ss_dssp ----G----S--CHHHHHHSCGGGTHHHHHHHTSTT
T ss_pred ----c----C--ChhhhccCCHHHHHHHHHHHhCch
Confidence 0 0 011223578899999999988754
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.65 E-value=8.6e-15 Score=138.63 Aligned_cols=205 Identities=12% Similarity=0.026 Sum_probs=140.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEE-eCCCCc-----------ccHHHHHHHHHHhHHHhhhhccCcC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLL-VRPKKG-----------KDIQERLDAIFEDRLFWRLRAEVPD 108 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~-~R~~~~-----------~~~~~~l~~l~~~~~~~~~~~~~~~ 108 (303)
...++++|||||+|+||.++++.|.+.|.. .|+++ .|+... ....+.++++...
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~--~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~------------ 313 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAG--HLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL------------ 313 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCC--EEEEEECCCC---------------CHHHHHHHHHH------------
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCC--EEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc------------
Confidence 346789999999999999999999999886 25555 777432 1111222222221
Q ss_pred cCCceEEEEecCCCCCCCCCHHHHHHHhc------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHh
Q psy17679 109 FRSKVSAVAGDCSLPGLGLSETDRATLVK------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLARE 175 (303)
Q Consensus 109 ~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~ 175 (303)
..++.++.+|++|.+ ++..+++ .+|+||||||.... ...+...+++|+.++.++.+++..
T Consensus 314 -g~~v~~~~~Dvtd~~------~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~ 386 (525)
T 3qp9_A 314 -GATATVVTCDLTDAE------AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLRE 386 (525)
T ss_dssp -TCEEEEEECCTTSHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEECCCCCHH------HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 257899999999977 6777765 47999999998542 234567889999999999999987
Q ss_pred cCC-----CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc--EEeecceecCccChHHH
Q psy17679 176 MKD-----LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV--HISGTGWIDNVYGPIGM 248 (303)
Q Consensus 176 ~~~-----~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~~~~~g~~~~ 248 (303)
. . ..+||++||..+... ......|..+|...+.+......... +.|.||.+.+.+.....
T Consensus 387 ~-~~~~~~~~~iV~~SS~a~~~g------------~~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~~~~ 453 (525)
T 3qp9_A 387 A-AAAGGRPPVLVLFSSVAAIWG------------GAGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVTEGA 453 (525)
T ss_dssp T-C----CCCEEEEEEEGGGTTC------------CTTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGGSSH
T ss_pred c-cccCCCCCEEEEECCHHHcCC------------CCCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccccccchh
Confidence 6 4 689999999966432 22356688888888888776665544 77888865332221111
Q ss_pred HHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 249 LVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
....+. ......+..+++++++..++..+..
T Consensus 454 ~~~~~~----------~~g~~~l~pee~a~~l~~~l~~~~~ 484 (525)
T 3qp9_A 454 TGERLR----------RLGLRPLAPATALTALDTALGHGDT 484 (525)
T ss_dssp HHHHHH----------HTTBCCBCHHHHHHHHHHHHHHTCS
T ss_pred hHHHHH----------hcCCCCCCHHHHHHHHHHHHhCCCC
Confidence 111111 0112357899999999999987643
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2e-14 Score=134.90 Aligned_cols=202 Identities=15% Similarity=0.114 Sum_probs=138.7
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHH-HHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++++|||||+|+||.++++.|.+.|+. +|+++.|+.......+.+ +++... ..++.++.+|++|
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~--~vvl~~R~~~~~~~~~~l~~~l~~~-------------g~~v~~~~~Dvtd 303 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAA--HLVLTSRRGADAPGAAELRAELEQL-------------GVRVTIAACDAAD 303 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCS--EEEEEESSGGGSTTHHHHHHHHHHT-------------TCEEEEEECCTTC
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCc--EEEEEeCCCCChHHHHHHHHHHHhc-------------CCeEEEEEccCCC
Confidence 489999999999999999999999874 388888875333222222 222221 2588999999999
Q ss_pred CCCCCCHHHHHHHhc------cccEEEEcceec-cc-------cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 123 PGLGLSETDRATLVK------QVNIVFHGAATV-RF-------DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~------~~dvVi~~a~~~-~~-------~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
.+ ++..+++ .+|+||||||.. .. ...+...+++|+.++.++.+++... +..+||++||.
T Consensus 304 ~~------~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-~~~~iV~~SS~ 376 (496)
T 3mje_A 304 RE------ALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-DLDAFVLFSSG 376 (496)
T ss_dssp HH------HHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-CCSEEEEEEEH
T ss_pred HH------HHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEeCh
Confidence 77 6777765 489999999986 22 2235678999999999999999887 78899999999
Q ss_pred cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc--EEeecceecC-ccChHHHHHHHHhhhhhhccCCCC
Q psy17679 189 FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV--HISGTGWIDN-VYGPIGMLVGIATGVLHTHLINLN 265 (303)
Q Consensus 189 ~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~~~-~~g~~~~~~~~~~~~~~~~~~~~~ 265 (303)
.+... ......|..+|...+.+.+....... +.+.||.+.+ .+...... ..... .
T Consensus 377 a~~~g------------~~g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~~----~~~l~------~ 434 (496)
T 3mje_A 377 AAVWG------------SGGQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGMATDPEV----HDRLV------R 434 (496)
T ss_dssp HHHTT------------CTTCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC----------CHHHH------H
T ss_pred HhcCC------------CCCcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCccccChHH----HHHHH------h
Confidence 55432 12345688888888888877655444 7888885432 12111000 00000 1
Q ss_pred ccccceehhHHHHHHHHHHhhccc
Q psy17679 266 TVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 266 ~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.....+..++.++++..++..+..
T Consensus 435 ~g~~~l~pe~~~~~l~~~l~~~~~ 458 (496)
T 3mje_A 435 QGVLAMEPEHALGALDQMLENDDT 458 (496)
T ss_dssp TTEEEECHHHHHHHHHHHHHHTCS
T ss_pred cCCCCCCHHHHHHHHHHHHcCCCc
Confidence 112346788888888888876543
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.50 E-value=1e-13 Score=133.72 Aligned_cols=194 Identities=11% Similarity=0.060 Sum_probs=120.1
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC-------CcccHHHHHHHHHHhHHHhhhhccCcCcCCce
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK-------KGKDIQERLDAIFEDRLFWRLRAEVPDFRSKV 113 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~-------~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v 113 (303)
.+++|+++||||+|+||+++++.|+++|+. |++++|.. +.....+..+++.. ...
T Consensus 16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga~---Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~---------------~~~ 77 (613)
T 3oml_A 16 RYDGRVAVVTGAGAGLGREYALLFAERGAK---VVVNDLGGTHSGDGASQRAADIVVDEIRK---------------AGG 77 (613)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEC--------------CHHHHHHHHHH---------------TTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCcccccccCCHHHHHHHHHHHHH---------------hCC
Confidence 467899999999999999999999999987 88887722 11111222222211 111
Q ss_pred EEEEecCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---
Q psy17679 114 SAVAGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM--- 176 (303)
Q Consensus 114 ~~~~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~--- 176 (303)
...+|+++.. ++..+++ ++|++|||||.... ...+...+++|+.++..+++++...
T Consensus 78 -~~~~D~~d~~------~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~ 150 (613)
T 3oml_A 78 -EAVADYNSVI------DGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKK 150 (613)
T ss_dssp -CEEECCCCGG------GHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -eEEEEeCCHH------HHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1347888765 4444443 68999999998532 2346788999999999998888432
Q ss_pred CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHH
Q psy17679 177 KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLV 250 (303)
Q Consensus 177 ~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~ 250 (303)
++..+||++||..+... ......|..+|...+.+.+.++..+ . +.+.||......
T Consensus 151 ~~~g~IV~isS~a~~~~------------~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~------- 211 (613)
T 3oml_A 151 QNYGRIIMTSSNSGIYG------------NFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMT------- 211 (613)
T ss_dssp TTCEEEEEECCHHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------
T ss_pred cCCCEEEEECCHHHcCC------------CCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhh-------
Confidence 25679999999855421 1234567778877777777655443 2 677787432111
Q ss_pred HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 251 GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.+.. +......+..+|+|.+++.++...
T Consensus 212 ---~~~~------~~~~~~~~~pedvA~~v~~L~s~~ 239 (613)
T 3oml_A 212 ---EGIL------PDILFNELKPKLIAPVVAYLCHES 239 (613)
T ss_dssp ---CCCC------CHHHHTTCCGGGTHHHHHHTTSTT
T ss_pred ---hhcc------chhhhhcCCHHHHHHHHHHhcCCC
Confidence 1100 112233468899999999888754
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=9e-15 Score=130.71 Aligned_cols=159 Identities=11% Similarity=0.072 Sum_probs=100.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCC----CccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCP----HLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~----~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
.|||+||||+||+|++++..|++.|+ ....|.++++.+..........++ .. ..+.++ +|
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl---------~~------~~~~~~-~d 67 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMEL---------ED------CAFPLL-AG 67 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHH---------HT------TTCTTE-EE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhh---------hc------cccccc-CC
Confidence 46899999999999999999999875 112488888753211001101111 10 112223 57
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCC-ceEEEEeCCcccCCCCcc
Q psy17679 120 CSLPGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDL-KAFVHVSTAFTHCPRERI 197 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~-~r~i~iSS~~~~~~~~~~ 197 (303)
+.+.. .+..+++++|+|||+||.... ..+...+++.|+.++.++++++.+.++. .+++++|+..... .++
T Consensus 68 i~~~~------~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~--~~~ 139 (327)
T 1y7t_A 68 LEATD------DPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTN--ALI 139 (327)
T ss_dssp EEEES------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH--HHH
T ss_pred eEecc------ChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhh--HHH
Confidence 76644 477888999999999998653 3456788999999999999999997214 4788888763110 011
Q ss_pred ccC-C-CCCCCChhhHHHHHHHHHHHHHHhhCcC
Q psy17679 198 DEE-F-YPVPLKYENLIQLISETGDEELSEMTPN 229 (303)
Q Consensus 198 ~E~-~-~~~~~~~~~~~~~~k~~~E~~~~~~~~~ 229 (303)
.++ . ...|..+|+ .+|...|++...+++.
T Consensus 140 ~~~~~~~~~p~~~yg---~tkl~~er~~~~~a~~ 170 (327)
T 1y7t_A 140 AYKNAPGLNPRNFTA---MTRLDHNRAKAQLAKK 170 (327)
T ss_dssp HHHTCTTSCGGGEEE---CCHHHHHHHHHHHHHH
T ss_pred HHHHcCCCChhheec---cchHHHHHHHHHHHHH
Confidence 111 1 123344444 4666677776655443
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=6.4e-13 Score=116.91 Aligned_cols=216 Identities=10% Similarity=0.026 Sum_probs=123.1
Q ss_pred cCCcEEEEeCCc--chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcC-CceEEEEe
Q psy17679 42 YRDKTIFLTGGT--GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFR-SKVSAVAG 118 (303)
Q Consensus 42 ~~~~~vlItGat--G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~-~~v~~~~~ 118 (303)
+++|+++||||+ |+||+++++.|++.|+. |++++|++.. .....-....-...+.+...... .....+.+
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~---V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAE---ILVGTWVPAL----NIFETSLRRGKFDQSRVLPDGSLMEIKKVYPL 78 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTCE---EEEEEEHHHH----HHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEE
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCe---EEEeeccccc----hhhhhhhhhhHhhhhhhhcccccccccccccc
Confidence 567899999999 99999999999999987 8888764210 00000000000000000000000 01234444
Q ss_pred cC--------C----C--------CCCCCCHHHHHHH-------hccccEEEEcceecc-----c----cccHHHHHhhh
Q psy17679 119 DC--------S----L--------PGLGLSETDRATL-------VKQVNIVFHGAATVR-----F----DEHIKMAVKIN 162 (303)
Q Consensus 119 Dl--------~----d--------~~~~~~~~~~~~~-------~~~~dvVi~~a~~~~-----~----~~~~~~~~~~N 162 (303)
|+ . | .+ ++..+ +.++|++|||||... . ...+...+++|
T Consensus 79 ~~~~~~~~dv~~Dv~~~~~~~~~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN 152 (297)
T 1d7o_A 79 DAVFDNPEDVPEDVKANKRYAGSSNW------TVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISAS 152 (297)
T ss_dssp CTTCCSGGGSCHHHHTSHHHHHCCCC------SHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHH
T ss_pred ceeccchhhhhhhhhccccccccCHH------HHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHh
Confidence 32 2 1 22 22222 237999999998532 1 23456789999
Q ss_pred HHHHHHHHHHHHhc-CCCceEEEEeCCcccCCCCccccCCCCCCCChh-hHHHHHHHHHHHHHHhhCcC-----Cc--EE
Q psy17679 163 VCGVQAMLQLAREM-KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYE-NLIQLISETGDEELSEMTPN-----RV--HI 233 (303)
Q Consensus 163 ~~~~~~ll~~a~~~-~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~-~~~~~~k~~~E~~~~~~~~~-----~~--~i 233 (303)
+.++..+++++.+. ....+||++||..+.... ..+ ..|..+|...+.+.+.+... .. +.
T Consensus 153 ~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~------------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~ 220 (297)
T 1d7o_A 153 SYSFVSLLSHFLPIMNPGGASISLTYIASERII------------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNT 220 (297)
T ss_dssp THHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred hhHHHHHHHHHHHHhccCceEEEEeccccccCC------------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEE
Confidence 99999999999875 112689999998654321 112 35777777777777655432 22 78
Q ss_pred eecceecCccChH-HHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 234 SGTGWIDNVYGPI-GMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 234 i~pg~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+.||++.+..... ..............+ ...+..++|+|+++++++...
T Consensus 221 v~PG~v~T~~~~~~~~~~~~~~~~~~~~p-----~~r~~~pedvA~~v~~l~s~~ 270 (297)
T 1d7o_A 221 ISAGPLGSRAAKAIGFIDTMIEYSYNNAP-----IQKTLTADEVGNAAAFLVSPL 270 (297)
T ss_dssp EEECCCBCCCSSCCSHHHHHHHHHHHHSS-----SCCCBCHHHHHHHHHHHTSGG
T ss_pred EeccccccchhhhccccHHHHHHhhccCC-----CCCCCCHHHHHHHHHHHhCcc
Confidence 8899876544221 011111111101111 113568999999999988754
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.45 E-value=8.8e-13 Score=117.83 Aligned_cols=181 Identities=8% Similarity=0.052 Sum_probs=108.2
Q ss_pred CcEEEEeCCcc--hhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 44 DKTIFLTGGTG--FMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 44 ~~~vlItGatG--~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+|+++||||++ +||++++++|++.|+. |++.+|++.........+.+. ...............+.++.+|++
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~---Vv~~~~~~~~~l~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~ 75 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVK---IIFGIWPPVYNIFMKNYKNGK---FDNDMIIDKDKKMNILDMLPFDAS 75 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCE---EEEEECHHHHHHHHHHHHTTT---TTGGGBCSSSCBCCEEEEEECCTT
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCE---EEEEecCccccccccchHHHH---HHHHHHHhhccccccccccccccc
Confidence 58999999875 9999999999999987 877776431000000000000 000000011111235778899998
Q ss_pred CCCCC-CCHH-------------HHHHH-------hccccEEEEcceecc---------ccccHHHHHhhhHHHHHHHHH
Q psy17679 122 LPGLG-LSET-------------DRATL-------VKQVNIVFHGAATVR---------FDEHIKMAVKINVCGVQAMLQ 171 (303)
Q Consensus 122 d~~~~-~~~~-------------~~~~~-------~~~~dvVi~~a~~~~---------~~~~~~~~~~~N~~~~~~ll~ 171 (303)
+.... .+.+ ++..+ +..+|++|||||... ....+...+++|+.++..+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 155 (329)
T 3lt0_A 76 FDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCK 155 (329)
T ss_dssp CSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence 87211 0111 12222 237899999999631 123457789999999999999
Q ss_pred HHHhc-CCCceEEEEeCCcccCCCCccccCCCCCCCChhh-HHHHHHHHHHHHHHhhC----c-CCc--EEeecceecCc
Q psy17679 172 LAREM-KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYEN-LIQLISETGDEELSEMT----P-NRV--HISGTGWIDNV 242 (303)
Q Consensus 172 ~a~~~-~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~-~~~~~k~~~E~~~~~~~----~-~~~--~ii~pg~~~~~ 242 (303)
++.+. ....+||++||..+... ...+. .|..+|...+.+.+.+. . ... +.+.||++.+.
T Consensus 156 ~~~p~m~~~g~Iv~isS~~~~~~------------~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 156 YFVNIMKPQSSIISLTYHASQKV------------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp HHGGGEEEEEEEEEEECGGGTSC------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred HHHHHHhhCCeEEEEeCccccCC------------CCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence 98875 11258999999966432 11222 56666666666665443 2 223 67889977543
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.1e-12 Score=116.62 Aligned_cols=224 Identities=12% Similarity=0.004 Sum_probs=108.0
Q ss_pred cCCcEEEEeCC--cchhHHHHHHHHHhcCCCccEEEEEeCCC--------CcccHHHHHHHHHHh---HHHhhhhccCcC
Q psy17679 42 YRDKTIFLTGG--TGFMGKTVVEKLLRSCPHLKHIYLLVRPK--------KGKDIQERLDAIFED---RLFWRLRAEVPD 108 (303)
Q Consensus 42 ~~~~~vlItGa--tG~iG~~l~~~Ll~~g~~v~~V~~~~R~~--------~~~~~~~~l~~l~~~---~~~~~~~~~~~~ 108 (303)
+++|+++|||| +|+||+++++.|++.|+. |++++|++ ......+....+... .....+... ..
T Consensus 7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~---Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 82 (319)
T 2ptg_A 7 LRGKTAFVAGVADSNGYGWAICKLLRAAGAR---VLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEK-PV 82 (319)
T ss_dssp CTTCEEEEECCCCTTSHHHHHHHHHHHTTCE---EEEEECHHHHHHHHC-------------------------------
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCE---EEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhc-cc
Confidence 56789999999 899999999999999987 88887642 000000000000000 000000000 00
Q ss_pred cCCceEEEEecC------------CC--------CCCCCCHHHHHHH-------hccccEEEEcceecc-----c----c
Q psy17679 109 FRSKVSAVAGDC------------SL--------PGLGLSETDRATL-------VKQVNIVFHGAATVR-----F----D 152 (303)
Q Consensus 109 ~~~~v~~~~~Dl------------~d--------~~~~~~~~~~~~~-------~~~~dvVi~~a~~~~-----~----~ 152 (303)
......++.+|+ ++ .+ ++..+ +.++|++|||||... + .
T Consensus 83 ~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~ 156 (319)
T 2ptg_A 83 DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGF------TISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSR 156 (319)
T ss_dssp --CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCC------SHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCH
T ss_pred cccccccccccccccccccccchhcccccccccCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCH
Confidence 000124444442 22 11 22222 237999999999641 1 2
Q ss_pred ccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeCCcccCCCCccccCCCCCCCChh-hHHHHHHHHHHHHHHhhCcC-
Q psy17679 153 EHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYE-NLIQLISETGDEELSEMTPN- 229 (303)
Q Consensus 153 ~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~-~~~~~~k~~~E~~~~~~~~~- 229 (303)
..+...+++|+.++..+++++.+. ....+||++||..+... ...+ ..|..+|...+.+.+.+...
T Consensus 157 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~------------~~~~~~~Y~asKaal~~l~~~la~el 224 (319)
T 2ptg_A 157 KGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKV------------IPGYGGGMSSAKAALESDCRTLAFEA 224 (319)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------------------THHHHHHHHHHH
T ss_pred HHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccc------------cCccchhhHHHHHHHHHHHHHHHHHh
Confidence 345678899999999999999875 11269999999865421 1112 34666666666666544322
Q ss_pred ----Cc--EEeecceecCccChHHHH--HHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 230 ----RV--HISGTGWIDNVYGPIGML--VGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 230 ----~~--~ii~pg~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.. +.+.||++.+........ ...........+........+...+|+|+++++++...
T Consensus 225 ~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~ 290 (319)
T 2ptg_A 225 GRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPL 290 (319)
T ss_dssp HHHHCCEEEEEEECCCC-------------------------------CCCHHHHHHHHHHHTSGG
T ss_pred ccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcc
Confidence 22 788899775543211000 00000000000000001123578999999999998754
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=3.8e-12 Score=112.96 Aligned_cols=212 Identities=12% Similarity=0.035 Sum_probs=121.5
Q ss_pred cCCcEEEEeCC--cchhHHHHHHHHHhcCCCccEEEEEeCCCCcccH-----HHHHHHHHHhHHHhhhhccCcCcCCceE
Q psy17679 42 YRDKTIFLTGG--TGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDI-----QERLDAIFEDRLFWRLRAEVPDFRSKVS 114 (303)
Q Consensus 42 ~~~~~vlItGa--tG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~-----~~~l~~l~~~~~~~~~~~~~~~~~~~v~ 114 (303)
+++|+++|||| +|+||+++++.|++.|+. |++++|++..... ...++++ ..+.. ......+.
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~---Vv~~~r~~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~ 75 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGAR---VALGTWPPVLGLFQKSLQSGRLDED------RKLPD--GSLIEFAG 75 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHTTTCE---EEEEECHHHHHHHHHHHHHTTTHHH------HBCTT--SCBCCCSC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHHHCCCE---EEEEecccccchhhhhhhhhhhhhh------hhhhc--cccccccc
Confidence 56799999999 899999999999999987 8888875210000 0001111 00000 00000123
Q ss_pred EEEecC------------CC--------CCCCCCHHHHHHH-------hccccEEEEcceecc-----c----cccHHHH
Q psy17679 115 AVAGDC------------SL--------PGLGLSETDRATL-------VKQVNIVFHGAATVR-----F----DEHIKMA 158 (303)
Q Consensus 115 ~~~~Dl------------~d--------~~~~~~~~~~~~~-------~~~~dvVi~~a~~~~-----~----~~~~~~~ 158 (303)
++.+|+ +| .+ ++..+ +.++|++|||||... + ...+...
T Consensus 76 ~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~ 149 (315)
T 2o2s_A 76 VYPLDAAFDKPEDVPQDIKDNKRYAGVDGY------TIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAA 149 (315)
T ss_dssp EEECCTTCSSTTSSCHHHHTCGGGSSCCCC------SHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHH
T ss_pred cccccccccccchhhhhhhcccccccCCHH------HHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHH
Confidence 444443 22 22 22322 237999999999642 1 2345678
Q ss_pred HhhhHHHHHHHHHHHHhc-CCCceEEEEeCCcccCCCCccccCCCCCCCChh-hHHHHHHHHHHHHHHhhCcC-----Cc
Q psy17679 159 VKINVCGVQAMLQLAREM-KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYE-NLIQLISETGDEELSEMTPN-----RV 231 (303)
Q Consensus 159 ~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~-~~~~~~k~~~E~~~~~~~~~-----~~ 231 (303)
+++|+.++..+++++.+. ....+||++||..+.... | .+ ..|..+|...+.+.+.+... ..
T Consensus 150 ~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~----------~--~~~~~Y~asKaal~~l~~~la~el~~~~gI 217 (315)
T 2o2s_A 150 SSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVV----------P--GYGGGMSSAKAALESDTRTLAWEAGQKYGV 217 (315)
T ss_dssp HHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCC----------T--TCCTTHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HhhhhHHHHHHHHHHHHHHhcCCEEEEEecccccccC----------C--CccHHHHHHHHHHHHHHHHHHHHhCcccCe
Confidence 999999999999999764 112689999998654321 1 11 24667777677766654322 22
Q ss_pred --EEeecceecCccChHH-------HHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 232 --HISGTGWIDNVYGPIG-------MLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 232 --~ii~pg~~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+.+.||++.+...... .............+ ...+...+|+|+++++++...
T Consensus 218 rvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p-----~~r~~~pedvA~~v~~L~s~~ 277 (315)
T 2o2s_A 218 RVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAP-----LRRDLHSDDVGGAALFLLSPL 277 (315)
T ss_dssp EEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHSS-----SCCCCCHHHHHHHHHHHTSGG
T ss_pred EEEEEecccccchhhhhccccccchhHHHHHHHHhccCC-----CCCCCCHHHHHHHHHHHhCch
Confidence 7888997754321100 00000000000111 112568999999999988754
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.39 E-value=2.7e-12 Score=123.53 Aligned_cols=198 Identities=11% Similarity=0.055 Sum_probs=124.1
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+++||+++++.|.+.|+. |++.+|... .+..+++... ..++..+.+|+
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~---Vv~~~~~~~----~~~~~~i~~~-------------g~~~~~~~~Dv 378 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAK---VVVNDFKDA----TKTVDEIKAA-------------GGEAWPDQHDV 378 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEECSSCC----HHHHHHHHHT-------------TCEEEEECCCH
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCE---EEEEeCccH----HHHHHHHHhc-------------CCeEEEEEcCh
Confidence 467899999999999999999999999997 777776321 1112222111 13566777888
Q ss_pred -CCCCCCCCHHHHHHHhccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCCc
Q psy17679 121 -SLPGLGLSETDRATLVKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTAF 189 (303)
Q Consensus 121 -~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~~ 189 (303)
.+... -.....+.+.++|++|||||.... ...+...+++|+.++..+.+++.+. ++..+||++||..
T Consensus 379 ~~~~~~--~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~a 456 (604)
T 2et6_A 379 AKDSEA--IIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTS 456 (604)
T ss_dssp HHHHHH--HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred HHHHHH--HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChh
Confidence 44220 011122223479999999997532 2346789999999998888777543 2457999999996
Q ss_pred ccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhhhccCC
Q psy17679 190 THCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLHTHLIN 263 (303)
Q Consensus 190 ~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (303)
+... ......|..+|.....+.+.++..+ . +.+.||. .+.+... ...
T Consensus 457 g~~~------------~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~-----~~~--------- 509 (604)
T 2et6_A 457 GIYG------------NFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLS-----IMR--------- 509 (604)
T ss_dssp HHSC------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC--------------------
T ss_pred hccC------------CCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccc-----cCc---------
Confidence 5432 1134567777777777666554332 2 6777984 2222110 000
Q ss_pred CCccccceehhHHHHHHHHHHhhcc
Q psy17679 264 LNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 264 ~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.........+|+|.++++++....
T Consensus 510 -~~~~~~~~pe~vA~~v~~L~s~~~ 533 (604)
T 2et6_A 510 -EQDKNLYHADQVAPLLVYLGTDDV 533 (604)
T ss_dssp ----CCSSCGGGTHHHHHHTTSTTC
T ss_pred -hhhccCCCHHHHHHHHHHHhCCcc
Confidence 001124578999999998876543
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.1e-11 Score=122.84 Aligned_cols=204 Identities=16% Similarity=0.106 Sum_probs=137.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHH-hcCCCccEEEEEeCCCCcc-cHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLL-RSCPHLKHIYLLVRPKKGK-DIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll-~~g~~v~~V~~~~R~~~~~-~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
..+++++||||+|+||+.+++.|. +.|.. +|++++|+.... ...+.++++... ..++.++.+|
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~--~vvl~~R~~~~~~~~~~~~~~l~~~-------------G~~v~~~~~D 592 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVR--NLVLVSRRGPAASGAAELVAQLTAY-------------GAEVSLQACD 592 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCC--EEEEEESSGGGSTTHHHHHHHHHHT-------------TCEEEEEECC
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCc--EEEEeccCccchHHHHHHHHHHHhc-------------CCcEEEEEee
Confidence 356899999999999999999999 78764 488889974332 233333444322 2578899999
Q ss_pred CCCCCCCCCHHHHHHHhc------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy17679 120 CSLPGLGLSETDRATLVK------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVS 186 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iS 186 (303)
++|.+ ++..+++ .+|+||||||.... ...+...+++|+.|+.++.+++.. .. +||++|
T Consensus 593 vsd~~------~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~--~l-~iV~~S 663 (795)
T 3slk_A 593 VADRE------TLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP--DV-ALVLFS 663 (795)
T ss_dssp TTCHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT--TS-EEEEEE
T ss_pred cCCHH------HHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh--CC-EEEEEc
Confidence 99977 6776665 47999999998542 234678899999999999998844 33 999999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc--EEeecceecCccChHHHHHHHHhhhhhhccCCC
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV--HISGTGWIDNVYGPIGMLVGIATGVLHTHLINL 264 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~ 264 (303)
|..+... ......|..+|.+.+.+.+....... +.+.||.+.+.. ..............
T Consensus 664 S~ag~~g------------~~g~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g-~~~~~~~~~~~~~~------ 724 (795)
T 3slk_A 664 SVSGVLG------------SGGQGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHG-MASTLREAEQDRLA------ 724 (795)
T ss_dssp ETHHHHT------------CSSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCC-HHHHHHHHHHHHHH------
T ss_pred cHHhcCC------------CCCCHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcch-hhccccHHHHHHHH------
Confidence 9965421 12345677888888888887766655 788888654321 11111110111111
Q ss_pred CccccceehhHHHHHHHHHHhhcc
Q psy17679 265 NTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 265 ~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+..++....+..++..+.
T Consensus 725 ~~g~~~l~~~e~~~~~~~~l~~~~ 748 (795)
T 3slk_A 725 RSGLLPISTEEGLSQFDAACGGAH 748 (795)
T ss_dssp HTTBCCCCHHHHHHHHHHHHTSSC
T ss_pred hcCCCCCCHHHHHHHHHHHHhCCC
Confidence 111234677888888887776554
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.2e-11 Score=112.59 Aligned_cols=168 Identities=12% Similarity=0.006 Sum_probs=107.9
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHh-cCCCccEEEEEeCCCCcccH---------HHHHHHHHHhHHHhhhhccCcCcCCc
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLR-SCPHLKHIYLLVRPKKGKDI---------QERLDAIFEDRLFWRLRAEVPDFRSK 112 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~-~g~~v~~V~~~~R~~~~~~~---------~~~l~~l~~~~~~~~~~~~~~~~~~~ 112 (303)
.+|++|||||+++||++++..|.+ .|.. |.+++|+...... ...+.+... .....
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~---Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~------------~~G~~ 124 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGAD---TLGVFFEKPGTASKAGTAGWYNSAAFDKHAK------------AAGLY 124 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCE---EEEEECCCCCCSSSCCCHHHHHHHHHHHHHH------------HTTCC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCE---EEEEeCCchhhhhhhcccccchhHHHHHHHH------------hcCCc
Confidence 378999999999999999999999 9987 8888887543221 111111111 01246
Q ss_pred eEEEEecCCCCCCCCCHHHHHHH-------h-ccccEEEEcceec----------------cc-----------------
Q psy17679 113 VSAVAGDCSLPGLGLSETDRATL-------V-KQVNIVFHGAATV----------------RF----------------- 151 (303)
Q Consensus 113 v~~~~~Dl~d~~~~~~~~~~~~~-------~-~~~dvVi~~a~~~----------------~~----------------- 151 (303)
+..+.+|++|.+ ++..+ + .++|++|||||.. ..
T Consensus 125 a~~i~~Dvtd~~------~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~ 198 (422)
T 3s8m_A 125 SKSINGDAFSDA------ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTII 198 (422)
T ss_dssp EEEEESCTTSHH------HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEE
T ss_pred EEEEEecCCCHH------HHHHHHHHHHHHcCCCCCEEEEcCcccccccccccccccccccccccccccccccccccccc
Confidence 788999999976 33333 3 5689999999862 01
Q ss_pred --------cccHHHHHhhhHHHHH-HHHHHHHhcC---CCceEEEEeCCcccCCCCccccCCCCCCCChh--hHHHHHHH
Q psy17679 152 --------DEHIKMAVKINVCGVQ-AMLQLAREMK---DLKAFVHVSTAFTHCPRERIDEEFYPVPLKYE--NLIQLISE 217 (303)
Q Consensus 152 --------~~~~~~~~~~N~~~~~-~ll~~a~~~~---~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~--~~~~~~k~ 217 (303)
...+...+++|..+.. .++..+.... +..++|++||..+.. +...+ ..|..+|.
T Consensus 199 ~~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~------------~~p~~~~~aY~ASKa 266 (422)
T 3s8m_A 199 QASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEI------------TWPIYWHGALGKAKV 266 (422)
T ss_dssp EEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGG------------GHHHHTSHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhc------------cCCCccchHHHHHHH
Confidence 1123445555554443 4555554320 125899999996532 22245 67888888
Q ss_pred HHHHHHHhhCcCC----c--EEeecceecCcc
Q psy17679 218 TGDEELSEMTPNR----V--HISGTGWIDNVY 243 (303)
Q Consensus 218 ~~E~~~~~~~~~~----~--~ii~pg~~~~~~ 243 (303)
..+.+.+.++..+ + +.+.||.+.+..
T Consensus 267 Al~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~ 298 (422)
T 3s8m_A 267 DLDRTAQRLNARLAKHGGGANVAVLKSVVTQA 298 (422)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHhCccCEEEEEEEcCCCcChh
Confidence 8888777665443 2 788899876544
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.33 E-value=7.2e-12 Score=127.47 Aligned_cols=203 Identities=11% Similarity=0.088 Sum_probs=127.8
Q ss_pred cCCcEEEEeCCcch-hHHHHHHHHHhcCCCccEEEEE-eCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGTGF-MGKTVVEKLLRSCPHLKHIYLL-VRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGatG~-iG~~l~~~Ll~~g~~v~~V~~~-~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+++|++|||||+|+ ||.++++.|++.|+. |+++ .|+...... ..+++ .........++.++.+|
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~---VVL~~~R~~e~lee--~a~eL---------~ael~a~Ga~V~vV~~D 539 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAK---VVVTTSRFSKQVTD--YYQSI---------YAKYGAKGSTLIVVPFN 539 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHTCE---EEEEESSCSTTTTT--HHHHT---------TTTTCCTTCEEEEEECC
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCcCE---EEEEeCCCHHHHHH--HHHHH---------HHHhhcCCCeEEEEEeC
Confidence 56789999999998 999999999999987 7776 465432211 11111 11111112478899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------------cccEEEEcceecccc----------ccHHHHHhhhHHHHHHHHHHHHhc
Q psy17679 120 CSLPGLGLSETDRATLVK-------------QVNIVFHGAATVRFD----------EHIKMAVKINVCGVQAMLQLAREM 176 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------------~~dvVi~~a~~~~~~----------~~~~~~~~~N~~~~~~ll~~a~~~ 176 (303)
++|.+ ++..+++ .+|++|||||..... ..+...+++|+.++..+++++...
T Consensus 540 VTD~e------sVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~l 613 (1688)
T 2pff_A 540 QGSKQ------DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSA 613 (1688)
T ss_dssp SSSTT------HHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred CCCHH------HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99987 5555442 489999999975321 235678899999999998887322
Q ss_pred -----CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHH-HHhhCcCCc-----EEeecceec-CccC
Q psy17679 177 -----KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEE-LSEMTPNRV-----HISGTGWID-NVYG 244 (303)
Q Consensus 177 -----~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~-~~~~~~~~~-----~ii~pg~~~-~~~g 244 (303)
++..+||++||..+... ....|..+|...+.+ .+.+...+. +.+.||++. +.+.
T Consensus 614 p~M~krggGrIVnISSiAG~~G--------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~ 679 (1688)
T 2pff_A 614 RGIETRPAQVILPMSPNHGTFG--------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLM 679 (1688)
T ss_dssp HTCTTSCEEECCCCCSCTTTSS--------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSS
T ss_pred hHHHhCCCCEEEEEEChHhccC--------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCccc
Confidence 12258999999865421 234577888888887 444444332 566698775 2221
Q ss_pred hHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 245 PIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.. ......... .....+...+|+|++++.++...
T Consensus 680 ~~-------~e~~~~~l~--~iplR~~sPEEVA~aIlFLaSd~ 713 (1688)
T 2pff_A 680 SA-------NNIIAEGIE--KMGVRTFSQKEMAFNLLGLLTPE 713 (1688)
T ss_dssp CT-------TTTCSTTTS--SSSCCCCCCCTTHHHHHHHTSTT
T ss_pred CC-------chHHHHHHH--hCCCCCCCHHHHHHHHHHHhCCC
Confidence 11 000000000 11112447889999999888654
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.4e-11 Score=128.88 Aligned_cols=202 Identities=11% Similarity=0.109 Sum_probs=127.0
Q ss_pred cCCcEEEEeCCcch-hHHHHHHHHHhcCCCccEEEEE-eCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 42 YRDKTIFLTGGTGF-MGKTVVEKLLRSCPHLKHIYLL-VRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 42 ~~~~~vlItGatG~-iG~~l~~~Ll~~g~~v~~V~~~-~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+++|++|||||+|+ ||.++++.|++.|+. |+++ .|+... ..+..+++... +. ....++.++.+|
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~---Vvl~~~R~~~~--l~~~~~eL~~~-----~~----~~g~~v~~v~~D 738 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAK---VVVTTSRFSKQ--VTDYYQSIYAK-----YG----AKGSTLIVVPFN 738 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTCE---EEEEESSCCHH--HHHHHHHHHHH-----HC----CTTCEEEEEECC
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCE---EEEEecCCHHH--HHHHHHHHHHH-----hh----cCCCeEEEEEec
Confidence 56799999999998 999999999999987 7777 454321 11111222110 00 112478899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------------cccEEEEcceecccc----------ccHHHHHhhhHHHHHHHHHHHHhc
Q psy17679 120 CSLPGLGLSETDRATLVK-------------QVNIVFHGAATVRFD----------EHIKMAVKINVCGVQAMLQLAREM 176 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------------~~dvVi~~a~~~~~~----------~~~~~~~~~N~~~~~~ll~~a~~~ 176 (303)
++|.+ ++..+++ .+|++|||||..... ..+...+++|+.++..+++++...
T Consensus 739 Vsd~~------sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~l 812 (1887)
T 2uv8_A 739 QGSKQ------DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSA 812 (1887)
T ss_dssp TTCHH------HHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred CCCHH------HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99976 4554432 589999999975321 235678999999999999887432
Q ss_pred C-----CCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHH-HHhhCcCC---c--EEeecceec-Ccc-
Q psy17679 177 K-----DLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEE-LSEMTPNR---V--HISGTGWID-NVY- 243 (303)
Q Consensus 177 ~-----~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~-~~~~~~~~---~--~ii~pg~~~-~~~- 243 (303)
. +..+||++||..+... ....|..+|...+.+ .+.+...+ . +.+.||++. +.+
T Consensus 813 p~m~~~~~G~IVnISS~ag~~g--------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~ 878 (1887)
T 2uv8_A 813 RGIETRPAQVILPMSPNHGTFG--------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLM 878 (1887)
T ss_dssp TTCCSCCEEEEEEECSCTTCSS--------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC---
T ss_pred hhhhhCCCCEEEEEcChHhccC--------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccccccc
Confidence 1 2258999999965421 234577777777776 44333322 3 677799875 222
Q ss_pred ChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 244 GPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 244 g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
........... .. + ..+...+|+|.+++.++...
T Consensus 879 ~~~~~~~~~~~----~~---p---lr~~sPEEVA~avlfLaSd~ 912 (1887)
T 2uv8_A 879 SANNIIAEGIE----KM---G---VRTFSQKEMAFNLLGLLTPE 912 (1887)
T ss_dssp --CCTTHHHHH----TT---S---CCCEEHHHHHHHHHGGGSHH
T ss_pred ccchhHHHHHH----hc---C---CCCCCHHHHHHHHHHHhCCC
Confidence 11000011111 00 1 13458899999999888654
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.29 E-value=2.6e-11 Score=116.60 Aligned_cols=163 Identities=12% Similarity=0.090 Sum_probs=103.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC------cccHHHH-HHHHHHhHHHhhhhccCcCcCCceE
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK------GKDIQER-LDAIFEDRLFWRLRAEVPDFRSKVS 114 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~------~~~~~~~-l~~l~~~~~~~~~~~~~~~~~~~v~ 114 (303)
+++|+++||||+++||+++++.|.++|+. |++.+|+.. .....+. .+++.. .+-.
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~Ga~---Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~---------------~g~~ 67 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKLGAK---VVVNDLGGALNGQGGNSKAADVVVDEIVK---------------NGGV 67 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECC-----------CHHHHHHHHHHH---------------TTCE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCE---EEEEeCCccccccccchHHHHHHHHHHHh---------------cCCe
Confidence 56799999999999999999999999997 777777541 0011122 122211 1111
Q ss_pred EEEecCCCCCCCCCHHHHH---HHhccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCce
Q psy17679 115 AVAGDCSLPGLGLSETDRA---TLVKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKA 181 (303)
Q Consensus 115 ~~~~Dl~d~~~~~~~~~~~---~~~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r 181 (303)
..+|++|..- ....+. +.+.++|++|||||.... ...+...+++|+.++..+.+++.+. ++..+
T Consensus 68 -~~~d~~d~~~--~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~ 144 (604)
T 2et6_A 68 -AVADYNNVLD--GDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGR 144 (604)
T ss_dssp -EEEECCCTTC--HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred -EEEEcCCHHH--HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCE
Confidence 2357776541 011122 223479999999997432 2346789999999998888777543 24579
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecc
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTG 237 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg 237 (303)
||++||..+... ......|..+|.....+.+.++..+ . +.+.||
T Consensus 145 IVnisS~ag~~~------------~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 145 IVNTSSPAGLYG------------NFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp EEEECCHHHHHC------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred EEEECCHHHcCC------------CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 999999965421 1123457777777777766554332 2 677786
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=4.4e-11 Score=124.91 Aligned_cols=203 Identities=12% Similarity=0.113 Sum_probs=126.8
Q ss_pred cCCcEEEEeCCcch-hHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGF-MGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~-iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++|++|||||+|+ ||.++++.|++.|+. |+++++..... ..+..+++... +. ....++.++.+|+
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~---VVl~~~R~~~~-l~~~a~eL~~e-----l~----~~G~~v~~v~~DV 716 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAK---VIVTTSRFSRQ-VTEYYQGIYAR-----CG----ARGSQLVVVPFNQ 716 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTCE---EEEEESSCCHH-HHHHHHHHHHH-----HC----CTTCEEEEEECCT
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCE---EEEEecCChHH-HHHHHHHHHHH-----hh----ccCCeEEEEEcCC
Confidence 56789999999999 999999999999987 77775432211 11111222110 10 1124788999999
Q ss_pred CCCCCCCCHHHHHHHhc-----------cccEEEEcceecccc----------ccHHHHHhhhHHHHHHHHHHHH--hc-
Q psy17679 121 SLPGLGLSETDRATLVK-----------QVNIVFHGAATVRFD----------EHIKMAVKINVCGVQAMLQLAR--EM- 176 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-----------~~dvVi~~a~~~~~~----------~~~~~~~~~N~~~~~~ll~~a~--~~- 176 (303)
+|.+ ++..+++ .+|+||||||..... ..+...+++|+.++..+++++. ..
T Consensus 717 sd~e------sV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M 790 (1878)
T 2uv9_A 717 GSKQ------DVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGY 790 (1878)
T ss_dssp TCHH------HHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCHH------HHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 9976 5555442 589999999975321 3457789999999988887632 21
Q ss_pred --CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhC-c---CCc--EEeecceec-CccChH-
Q psy17679 177 --KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMT-P---NRV--HISGTGWID-NVYGPI- 246 (303)
Q Consensus 177 --~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~-~---~~~--~ii~pg~~~-~~~g~~- 246 (303)
++..+||++||..+... ....|..+|...+.+.+.+. . ... +.+.||++. +.+...
T Consensus 791 ~~~~~G~IVnISS~ag~~g--------------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~ 856 (1878)
T 2uv9_A 791 ETRPAQVILPLSPNHGTFG--------------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSAN 856 (1878)
T ss_dssp CSCCEEECCEECSCSSSSS--------------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHH
T ss_pred HhCCCCEEEEEcchhhccC--------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccc
Confidence 12358999999965432 12357777777777654321 1 113 677899875 443221
Q ss_pred HHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 247 GMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
........ . . + ..+...+|+|++++.++...
T Consensus 857 ~~~~~~~~----~-~--p---lr~~sPeEVA~avlfLaSd~ 887 (1878)
T 2uv9_A 857 NLVAEGVE----K-L--G---VRTFSQQEMAFNLLGLMAPA 887 (1878)
T ss_dssp HHTHHHHH----T-T--T---CCCBCHHHHHHHHHHHHSHH
T ss_pred hhhHHHHH----h-c--C---CCCCCHHHHHHHHHHHhCCc
Confidence 11111111 1 1 1 12348899999999888654
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=8.7e-11 Score=106.15 Aligned_cols=167 Identities=10% Similarity=-0.004 Sum_probs=106.2
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHh-cCCCccEEEEEeCCCCcccH---------HHHHHHHHHhHHHhhhhccCcCcCCc
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLR-SCPHLKHIYLLVRPKKGKDI---------QERLDAIFEDRLFWRLRAEVPDFRSK 112 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~-~g~~v~~V~~~~R~~~~~~~---------~~~l~~l~~~~~~~~~~~~~~~~~~~ 112 (303)
.+|++|||||+++||.++++.|.+ .|.. |.+++|+...... .+.+++.... ....
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~---Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~------------~G~~ 110 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGCGAD---TLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ------------KGLY 110 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHHCCE---EEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH------------TTCC
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhcCCE---EEEEeCCchhhhhhcccccchhHHHHHHHHHh------------cCCc
Confidence 468999999999999999999999 9987 8788886543210 1111111110 1246
Q ss_pred eEEEEecCCCCCCCCCHHHHHHHh-------ccccEEEEcceecc-----------------------------------
Q psy17679 113 VSAVAGDCSLPGLGLSETDRATLV-------KQVNIVFHGAATVR----------------------------------- 150 (303)
Q Consensus 113 v~~~~~Dl~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~----------------------------------- 150 (303)
+..+.+|+++.+ ++..++ .++|++|||||...
T Consensus 111 a~~i~~Dvtd~~------~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~ 184 (405)
T 3zu3_A 111 AKSINGDAFSDE------IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKE 184 (405)
T ss_dssp EEEEESCTTSHH------HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEE
T ss_pred eEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEEcCccccccCcccccccccccccccccccccccccccccccc
Confidence 788999999976 444443 37899999998630
Q ss_pred ------ccccHHHHHhhhHHHHH-HHHHHHHhc---CCCceEEEEeCCcccCCCCccccCCCCCCCChh--hHHHHHHHH
Q psy17679 151 ------FDEHIKMAVKINVCGVQ-AMLQLAREM---KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYE--NLIQLISET 218 (303)
Q Consensus 151 ------~~~~~~~~~~~N~~~~~-~ll~~a~~~---~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~--~~~~~~k~~ 218 (303)
....+...+++|..+.. .++..+... .+..++|++||..+... ...+ ..|..+|..
T Consensus 185 ~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~------------~p~~~~~aY~AaKaa 252 (405)
T 3zu3_A 185 SVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKIT------------HDIYWNGSIGAAKKD 252 (405)
T ss_dssp EEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGG------------TTTTTTSHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCc------------CCCccchHHHHHHHH
Confidence 01234566777766554 455554322 01258999999965421 1233 567777776
Q ss_pred HHHHHHhh----CcC-Cc--EEeecceecCc
Q psy17679 219 GDEELSEM----TPN-RV--HISGTGWIDNV 242 (303)
Q Consensus 219 ~E~~~~~~----~~~-~~--~ii~pg~~~~~ 242 (303)
.+.+.+.+ .+. .+ +.+.||.+.+.
T Consensus 253 l~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~ 283 (405)
T 3zu3_A 253 LDQKVLAIRESLAAHGGGDARVSVLKAVVSQ 283 (405)
T ss_dssp HHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred HHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence 66666544 344 33 78889977543
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=2.3e-10 Score=104.75 Aligned_cols=167 Identities=10% Similarity=-0.002 Sum_probs=104.7
Q ss_pred cCCcEEEEeCCcchhHHH--HHHHHHhcCCCccEEEEEeCCCCcccH---------HHHHHHHHHhHHHhhhhccCcCcC
Q psy17679 42 YRDKTIFLTGGTGFMGKT--VVEKLLRSCPHLKHIYLLVRPKKGKDI---------QERLDAIFEDRLFWRLRAEVPDFR 110 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~--l~~~Ll~~g~~v~~V~~~~R~~~~~~~---------~~~l~~l~~~~~~~~~~~~~~~~~ 110 (303)
..+|++|||||+++||.+ ++..|.+.|+. |++++|+...... .+.++++... ..
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~---Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------------~g 122 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAH---TIGVSYETGATDRRIGTAGWYNNIFFKEFAKK------------KG 122 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCE---EEEEECCCCCCSSCCCCHHHHHHHHHHHHHHH------------TT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCE---EEEEecCcchhhhcccccccchHHHHHHHHHH------------cC
Confidence 457899999999999999 99999998987 8888887543210 1223222211 12
Q ss_pred CceEEEEecCCCCCCCCCHHHHHHHhc-------cccEEEEcceec-------------c---c----------------
Q psy17679 111 SKVSAVAGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATV-------------R---F---------------- 151 (303)
Q Consensus 111 ~~v~~~~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~-------------~---~---------------- 151 (303)
.++.++.+|+++.+ ++..+++ ++|++|||||.. . .
T Consensus 123 ~~~~~~~~Dvtd~~------~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~ 196 (418)
T 4eue_A 123 LVAKNFIEDAFSNE------TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEI 196 (418)
T ss_dssp CCEEEEESCTTCHH------HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEE
T ss_pred CcEEEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCccccccccccccccccccccccccccccccccccccc
Confidence 56889999999976 4444433 689999999963 0 0
Q ss_pred ---------cccHHHHHhhhHHHHH-HHHHHHHhc---CCCceEEEEeCCcccCCCCccccCCCCCCCChh--hHHHHHH
Q psy17679 152 ---------DEHIKMAVKINVCGVQ-AMLQLAREM---KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYE--NLIQLIS 216 (303)
Q Consensus 152 ---------~~~~~~~~~~N~~~~~-~ll~~a~~~---~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~--~~~~~~k 216 (303)
...+...+++|..+.. .++..+... .+..++|++||..+.. +...| +.|..+|
T Consensus 197 ~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~------------~~p~~~~~aY~ASK 264 (418)
T 4eue_A 197 TLKKVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPR------------TYKIYREGTIGIAK 264 (418)
T ss_dssp EEEEECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGG------------GTTTTTTSHHHHHH
T ss_pred ccccccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcC------------CCCccccHHHHHHH
Confidence 1123344555544333 445554432 1225799999985432 12234 6677777
Q ss_pred HHHHHHHHhhC----c-CCc--EEeecceecC
Q psy17679 217 ETGDEELSEMT----P-NRV--HISGTGWIDN 241 (303)
Q Consensus 217 ~~~E~~~~~~~----~-~~~--~ii~pg~~~~ 241 (303)
...+.+.+.++ + ..+ +++.||.+.+
T Consensus 265 aAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T 296 (418)
T 4eue_A 265 KDLEDKAKLINEKLNRVIGGRAFVSVNKALVT 296 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred HHHHHHHHHHHHHhCCccCeEEEEEECCcCcC
Confidence 77666665443 3 233 6788987754
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.98 E-value=1e-09 Score=82.31 Aligned_cols=95 Identities=16% Similarity=0.110 Sum_probs=71.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcC-CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSC-PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g-~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
++++|+|+|+ |++|+.+++.|++.| ++ |++++|++. +++.+. ..++.++.+|+.
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~---v~~~~r~~~------~~~~~~---------------~~~~~~~~~d~~ 58 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYS---VTVADHDLA------ALAVLN---------------RMGVATKQVDAK 58 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEE---EEEEESCHH------HHHHHH---------------TTTCEEEECCTT
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCce---EEEEeCCHH------HHHHHH---------------hCCCcEEEecCC
Confidence 4578999999 999999999999998 55 899999642 222221 146778999998
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEE
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~ 184 (303)
+.+ .+..+++++|+|||+++.. ....+++.+.+. ++++|.+
T Consensus 59 ~~~------~~~~~~~~~d~vi~~~~~~---------------~~~~~~~~~~~~-g~~~~~~ 99 (118)
T 3ic5_A 59 DEA------GLAKALGGFDAVISAAPFF---------------LTPIIAKAAKAA-GAHYFDL 99 (118)
T ss_dssp CHH------HHHHHTTTCSEEEECSCGG---------------GHHHHHHHHHHT-TCEEECC
T ss_pred CHH------HHHHHHcCCCEEEECCCch---------------hhHHHHHHHHHh-CCCEEEe
Confidence 865 6888889999999999631 124678888887 6665543
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=5e-09 Score=114.58 Aligned_cols=155 Identities=17% Similarity=0.132 Sum_probs=105.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccH-HHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDI-QERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~-~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
..+|+++||||+|+||+.+++.|.++|.. .|++++|+...... .+.++++... ..++.++.+|+
T Consensus 1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~--~vvl~~R~~~~~~~~~~~~~~l~~~-------------g~~v~~~~~Dv 1946 (2512)
T 2vz8_A 1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQ--KLVLTSRSGIRTGYQARQVREWRRQ-------------GVQVLVSTSNA 1946 (2512)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCC--EEEEECSSCCCSHHHHHHHHHHHHT-------------TCEEEEECCCS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCC--EEEEEeCCCcchHHHHHHHHHHHhC-------------CCEEEEEecCC
Confidence 46789999999999999999999999875 37778887654322 2222332221 25788899999
Q ss_pred CCCCCCCCHHHHHHHh------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEe
Q psy17679 121 SLPGLGLSETDRATLV------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVS 186 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iS 186 (303)
++.+ ++..++ ..+|+||||||.... ...+...+++|+.|+.++.+++... ....+||++|
T Consensus 1947 sd~~------~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iS 2020 (2512)
T 2vz8_A 1947 SSLD------GARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFS 2020 (2512)
T ss_dssp SSHH------HHHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEEC
T ss_pred CCHH------HHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEec
Confidence 9976 444443 368999999997532 2345678899999999998887653 2346999999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN 229 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~ 229 (303)
|..+... ......|..+|...+.+.+.....
T Consensus 2021 S~ag~~g------------~~g~~~Y~aaKaal~~l~~~rr~~ 2051 (2512)
T 2vz8_A 2021 SVSCGRG------------NAGQANYGFANSAMERICEKRRHD 2051 (2512)
T ss_dssp CHHHHTT------------CTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhcCC------------CCCcHHHHHHHHHHHHHHHHHHHC
Confidence 9965432 113456888888888888844333
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.80 E-value=1.9e-08 Score=89.48 Aligned_cols=119 Identities=12% Similarity=0.025 Sum_probs=80.8
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|||+|+||+|++|.+++..|++.|. +..|.++++++. .....++. .... ...+..+ ..
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~-~~ev~l~Di~~~----~~~~~dL~---------~~~~--~~~v~~~----~~ 66 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPL-VSVLHLYDVVNA----PGVTADIS---------HMDT--GAVVRGF----LG 66 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTT-EEEEEEEESSSH----HHHHHHHH---------TSCS--SCEEEEE----ES
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEeCCCc----HhHHHHhh---------cccc--cceEEEE----eC
Confidence 457999999999999999999998872 234888887643 11111111 0000 0122221 11
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
.. ++..+++++|+|||+||.... ......++..|+.++..+++.+.+. +.+++|+++|-
T Consensus 67 t~------d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~SN 126 (326)
T 1smk_A 67 QQ------QLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLISN 126 (326)
T ss_dssp HH------HHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCS
T ss_pred CC------CHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECC
Confidence 11 577888999999999997543 3334567889999999999999998 67777777765
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=4.7e-08 Score=107.30 Aligned_cols=203 Identities=14% Similarity=0.151 Sum_probs=118.5
Q ss_pred cCCcEEEEeCCcch-hHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGF-MGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~-iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++|++|||||+++ ||.++++.|++.|.. |++++|+.... ..+.++++... +. ....++.++.+|+
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~---Vvi~~r~~~~~-~~~~~~~l~~~-----l~----~~G~~~~~v~~Dv 2200 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGAT---VIATTSRLDDD-RLAFYKQLYRD-----HA----RFDATLWVVPANM 2200 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCE---EEEEESCCSHH-HHHHHHHHHHH-----HC----CTTCEEEEEECCT
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCE---EEEEeCChhhh-hhHHHHHHHHH-----Hh----hcCCeEEEEEecC
Confidence 67899999999999 999999999999997 88888876431 11112222211 10 1124678899999
Q ss_pred CCCCCCCCHHHHHHHh-----------ccccEEEEccee----ccc--------cccH----HHHHhhhHHHHHHHHHHH
Q psy17679 121 SLPGLGLSETDRATLV-----------KQVNIVFHGAAT----VRF--------DEHI----KMAVKINVCGVQAMLQLA 173 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~-----------~~~dvVi~~a~~----~~~--------~~~~----~~~~~~N~~~~~~ll~~a 173 (303)
++.+ ++..++ .++|++|||||. ..+ ...+ +..+++|+.++..++..+
T Consensus 2201 td~~------~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~ 2274 (3089)
T 3zen_D 2201 ASYS------DIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGL 2274 (3089)
T ss_dssp TCHH------HHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHH
T ss_pred CCHH------HHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9976 455442 258999999997 111 1112 344788888888877766
Q ss_pred Hhc---CCC---ceEEEEeCC-cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC--Cc-----EEeeccee
Q psy17679 174 REM---KDL---KAFVHVSTA-FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN--RV-----HISGTGWI 239 (303)
Q Consensus 174 ~~~---~~~---~r~i~iSS~-~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~--~~-----~ii~pg~~ 239 (303)
... .+. ..+|..+|. .+.. + ....|..+|...+.+.+.++.. +. +.+.||++
T Consensus 2275 ~~~m~~~~~g~~~~ii~~~ss~~g~~------------g--~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v 2340 (3089)
T 3zen_D 2275 SKIGAERDIASRLHVVLPGSPNRGMF------------G--GDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWT 2340 (3089)
T ss_dssp HHHHHHTTCCCCEEEEEEECSSTTSC------------S--SCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCE
T ss_pred HHHHHHcCCCceeEEEEECCcccccC------------C--CchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeeccc
Confidence 542 121 122222222 1110 0 1124777777777777766544 22 56669987
Q ss_pred c-Cc-cChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 240 D-NV-YGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 240 ~-~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
. +. ............ . . + ......+|+|.+++.++...
T Consensus 2341 ~tT~l~~~~~~~~~~~~----~-~--~---~r~~~PeEIA~avlfLaS~~ 2380 (3089)
T 3zen_D 2341 KGTGLMGQNDAIVSAVE----E-A--G---VTTYTTDEMAAMLLDLCTVE 2380 (3089)
T ss_dssp ECSTTTTTTTTTHHHHG----G-G--S---CBCEEHHHHHHHHHHTTSHH
T ss_pred CCCcccccchhHHHHHH----h-c--C---CCCCCHHHHHHHHHHHhChh
Confidence 4 22 211111111111 0 0 0 11237899999999877644
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.75 E-value=2.4e-08 Score=88.97 Aligned_cols=124 Identities=13% Similarity=0.063 Sum_probs=82.7
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCC----CccEEEEEeCCCCc-cc-HHHHHHHHHHhHHHhhhhccCcCcCCceEEE
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCP----HLKHIYLLVRPKKG-KD-IQERLDAIFEDRLFWRLRAEVPDFRSKVSAV 116 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~----~v~~V~~~~R~~~~-~~-~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~ 116 (303)
+.+||+||||+||+|++++..|+..|. ....|.++++.... .. ......++ .... ..+
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl---------~~~~----~~~--- 67 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEI---------DDCA----FPL--- 67 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHH---------HTTT----CTT---
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHH---------hhhc----ccc---
Confidence 347999999999999999999998864 11248887775100 00 11111111 1000 011
Q ss_pred EecCCCCCCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcC-CCceEEEEeCC
Q psy17679 117 AGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMK-DLKAFVHVSTA 188 (303)
Q Consensus 117 ~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~-~~~r~i~iSS~ 188 (303)
..|+.... ++..+++++|+|||+||.... .....+++..|+..++.+++.+.+.. ...+||++|..
T Consensus 68 ~~~i~~~~------~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNP 135 (329)
T 1b8p_A 68 LAGMTAHA------DPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNP 135 (329)
T ss_dssp EEEEEEES------SHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred cCcEEEec------CcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCc
Confidence 13444333 477889999999999997643 34556788999999999999999883 34489999875
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=2.6e-08 Score=88.10 Aligned_cols=122 Identities=17% Similarity=0.131 Sum_probs=78.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||+||||+|++|++++..|+..|. ...+.+++++... ...+.....+.+.. . .....+.+...+ |
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~-~~el~L~Di~~~~-~~~~~~~~dl~~~~----~----~~~~~~~i~~~~--d-- 66 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPF-MKDLVLIGREHSI-NKLEGLREDIYDAL----A----GTRSDANIYVES--D-- 66 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT-CCEEEEEECGGGH-HHHHHHHHHHHHHH----T----TSCCCCEEEEEE--T--
T ss_pred CEEEEECCCChhHHHHHHHHHhCCC-CCEEEEEcCCCch-hhhHHHHHHHHHhH----H----hcCCCeEEEeCC--c--
Confidence 5899999999999999999998865 2347777762111 11111111111100 0 000123333222 1
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
++..+++++|+|||+||.... ......++..|+.++..+++++.+. + +++|+++|-
T Consensus 67 ------~l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~-~~~vlv~SN 123 (313)
T 1hye_A 67 ------ENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-C-DTKIFVITN 123 (313)
T ss_dssp ------TCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEECSS
T ss_pred ------chHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecC
Confidence 134667899999999997643 3445678899999999999999999 6 777777765
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=9.2e-08 Score=83.47 Aligned_cols=82 Identities=23% Similarity=0.252 Sum_probs=61.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+|++|++++..|++.|+. |+++.|+... .+.+.+.+... .++.++.+|++
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~---V~i~~R~~~~---~~~l~~~~~~~-------------~~~~~~~~D~~ 177 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE---VVLCGRKLDK---AQAAADSVNKR-------------FKVNVTAAETA 177 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHHHHHHHH-------------HTCCCEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE---EEEEECCHHH---HHHHHHHHHhc-------------CCcEEEEecCC
Confidence 56789999999999999999999999886 8899996421 11111111100 14567789998
Q ss_pred CCCCCCCHHHHHHHhccccEEEEccee
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAAT 148 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~ 148 (303)
+.+ ++..+++++|+|||+++.
T Consensus 178 ~~~------~~~~~~~~~DvlVn~ag~ 198 (287)
T 1lu9_A 178 DDA------SRAEAVKGAHFVFTAGAI 198 (287)
T ss_dssp SHH------HHHHHTTTCSEEEECCCT
T ss_pred CHH------HHHHHHHhCCEEEECCCc
Confidence 865 678888899999999985
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.60 E-value=5.3e-07 Score=79.27 Aligned_cols=119 Identities=11% Similarity=0.008 Sum_probs=77.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||+||||+|++|++++..|+..|. ...+.++++.... ...+....-+.+ ... ....+.+.. + +
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~-~~el~L~Di~~~~-~~~~~~~~dl~~----~~~-----~~~~~~v~~-~--~-- 64 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDI-ADEVVFVDIPDKE-DDTVGQAADTNH----GIA-----YDSNTRVRQ-G--G-- 64 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-CSEEEEECCGGGH-HHHHHHHHHHHH----HHT-----TTCCCEEEE-C--C--
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEcCCCCh-hhHHHHHHHHHH----HHh-----hCCCcEEEe-C--C--
Confidence 5899999999999999999988865 2347777762111 111111111111 000 012333333 2 1
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
..+++++|+|||+|+.... ......++..|+..+..+++.+.+. +..++|+++|-
T Consensus 65 --------~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SN 120 (303)
T 1o6z_A 65 --------YEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSN 120 (303)
T ss_dssp --------GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCS
T ss_pred --------HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCC
Confidence 2346789999999997543 3445678899999999999999998 77778877766
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.43 E-value=4.6e-07 Score=83.97 Aligned_cols=109 Identities=14% Similarity=0.165 Sum_probs=72.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|++++|+|+| +|++|++++..|++.|++ |++++|+.. +.+++. ....++.++.+|+.
T Consensus 1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~---V~v~~R~~~------~a~~la-------------~~~~~~~~~~~Dv~ 57 (450)
T 1ff9_A 1 MATKSVLMLG-SGFVTRPTLDVLTDSGIK---VTVACRTLE------SAKKLS-------------AGVQHSTPISLDVN 57 (450)
T ss_dssp -CCCEEEEEC-CSTTHHHHHHHHHTTTCE---EEEEESSHH------HHHHTT-------------TTCTTEEEEECCTT
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCcCE---EEEEECCHH------HHHHHH-------------HhcCCceEEEeecC
Confidence 4568999998 799999999999998865 888998632 221110 00124678889998
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHh--hh-------HHHHHHHHHHHHhcCCCc
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVK--IN-------VCGVQAMLQLAREMKDLK 180 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~--~N-------~~~~~~ll~~a~~~~~~~ 180 (303)
+.+ ++..+++++|+|||+++......-....++ .| ......++++|++. +++
T Consensus 58 d~~------~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a-Gv~ 118 (450)
T 1ff9_A 58 DDA------ALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA-GIT 118 (450)
T ss_dssp CHH------HHHHHHTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT-TCE
T ss_pred CHH------HHHHHHcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHC-CCe
Confidence 765 677888899999999986422111111111 12 23567888888887 553
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=5.7e-07 Score=69.42 Aligned_cols=102 Identities=16% Similarity=0.233 Sum_probs=66.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++|+|+|+ |.+|..+++.|.+.|++ |++++|++. +++.+. .....++.+|..
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~---v~~~d~~~~------~~~~~~---------------~~~~~~~~~d~~ 58 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGHE---VLAVDINEE------KVNAYA---------------SYATHAVIANAT 58 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCC---CEEEESCHH------HHHTTT---------------TTCSEEEECCTT
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCCE---EEEEeCCHH------HHHHHH---------------HhCCEEEEeCCC
Confidence 34578999997 99999999999999987 778888632 111110 024467788887
Q ss_pred CCCCCCCHHHHHHH-hccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 122 LPGLGLSETDRATL-VKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~~~~~~~-~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
+.+ .+..+ ++++|+||++++.. . +.| ..+...++.. +.+++|..++.
T Consensus 59 ~~~------~l~~~~~~~~d~vi~~~~~~-----~----~~~----~~~~~~~~~~-~~~~ii~~~~~ 106 (144)
T 2hmt_A 59 EEN------ELLSLGIRNFEYVIVAIGAN-----I----QAS----TLTTLLLKEL-DIPNIWVKAQN 106 (144)
T ss_dssp CHH------HHHTTTGGGCSEEEECCCSC-----H----HHH----HHHHHHHHHT-TCSEEEEECCS
T ss_pred CHH------HHHhcCCCCCCEEEECCCCc-----h----HHH----HHHHHHHHHc-CCCeEEEEeCC
Confidence 643 45554 57899999998741 0 112 2355666676 56677665554
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.35 E-value=2.4e-06 Score=66.05 Aligned_cols=74 Identities=15% Similarity=0.191 Sum_probs=55.5
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++++|+|+|+ |.+|+++++.|.+.|++ |+++++++. +++.+.. .++.++.+|.++
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~---V~~id~~~~------~~~~~~~---------------~~~~~~~gd~~~ 59 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKK---VLAVDKSKE------KIELLED---------------EGFDAVIADPTD 59 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCC---EEEEESCHH------HHHHHHH---------------TTCEEEECCTTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCe---EEEEECCHH------HHHHHHH---------------CCCcEEECCCCC
Confidence 4578999996 99999999999999998 889998642 2222221 467789999998
Q ss_pred CCCCCCHHHHHHH-hccccEEEEcce
Q psy17679 123 PGLGLSETDRATL-VKQVNIVFHGAA 147 (303)
Q Consensus 123 ~~~~~~~~~~~~~-~~~~dvVi~~a~ 147 (303)
++ .+..+ .+++|+||.+.+
T Consensus 60 ~~------~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 60 ES------FYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp HH------HHHHSCCTTCSEEEECCS
T ss_pred HH------HHHhCCcccCCEEEEecC
Confidence 65 45544 358999998766
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.4e-06 Score=73.05 Aligned_cols=81 Identities=20% Similarity=0.259 Sum_probs=54.8
Q ss_pred CCcEEEEeCC----------------cchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccC
Q psy17679 43 RDKTIFLTGG----------------TGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEV 106 (303)
Q Consensus 43 ~~~~vlItGa----------------tG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~ 106 (303)
++|+|||||| +|.+|.++++.++++|++ |+.+.|+.....
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~---V~lv~~~~~~~~--------------------- 57 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYE---VCLITTKRALKP--------------------- 57 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCE---EEEEECTTSCCC---------------------
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCE---EEEEeCCccccc---------------------
Confidence 5789999999 999999999999999998 888888753110
Q ss_pred cCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceecccc
Q psy17679 107 PDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFD 152 (303)
Q Consensus 107 ~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~ 152 (303)
....++.++..+ +.. .-...+...+.++|++||+||..++.
T Consensus 58 -~~~~~~~~~~v~--s~~--em~~~v~~~~~~~Dili~aAAvsD~~ 98 (232)
T 2gk4_A 58 -EPHPNLSIREIT--NTK--DLLIEMQERVQDYQVLIHSMAVSDYT 98 (232)
T ss_dssp -CCCTTEEEEECC--SHH--HHHHHHHHHGGGCSEEEECSBCCSEE
T ss_pred -cCCCCeEEEEHh--HHH--HHHHHHHHhcCCCCEEEEcCcccccc
Confidence 001344444333 211 00113334456899999999987764
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.26 E-value=1.5e-05 Score=61.01 Aligned_cols=98 Identities=15% Similarity=0.186 Sum_probs=63.8
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|+|+|+|+ |.+|..+++.|.+.|++ |++++|++. .++.+... .++.++.+|..+.
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~---v~~~d~~~~------~~~~~~~~--------------~~~~~~~~d~~~~ 59 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHD---IVLIDIDKD------ICKKASAE--------------IDALVINGDCTKI 59 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH--------------CSSEEEESCTTSH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe---EEEEECCHH------HHHHHHHh--------------cCcEEEEcCCCCH
Confidence 478999986 99999999999999876 888888642 22222111 2566778887764
Q ss_pred CCCCCHHHHHHH-hccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy17679 124 GLGLSETDRATL-VKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVS 186 (303)
Q Consensus 124 ~~~~~~~~~~~~-~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iS 186 (303)
. .+... ++++|+||++.+.. ..| ..+...++.. +..++|..+
T Consensus 60 ~------~l~~~~~~~~d~vi~~~~~~----------~~~----~~~~~~~~~~-~~~~ii~~~ 102 (140)
T 1lss_A 60 K------TLEDAGIEDADMYIAVTGKE----------EVN----LMSSLLAKSY-GINKTIARI 102 (140)
T ss_dssp H------HHHHTTTTTCSEEEECCSCH----------HHH----HHHHHHHHHT-TCCCEEEEC
T ss_pred H------HHHHcCcccCCEEEEeeCCc----------hHH----HHHHHHHHHc-CCCEEEEEe
Confidence 3 34433 56899999997531 112 2345566666 556766433
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=6.3e-06 Score=72.73 Aligned_cols=118 Identities=14% Similarity=0.087 Sum_probs=78.9
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|+||+|++|..++..|+..|. +..|.++++++ ......++ .... ...++....+ ..
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~-~~ev~L~Di~~----~~~~a~dL---------~~~~--~~~~l~~~~~----t~ 60 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPL-VSRLTLYDIAH----TPGVAADL---------SHIE--TRATVKGYLG----PE 60 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTT-CSEEEEEESSS----HHHHHHHH---------TTSS--SSCEEEEEES----GG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CcEEEEEeCCc----cHHHHHHH---------hccC--cCceEEEecC----CC
Confidence 5899999999999999999998863 34599999875 11111111 1100 0012222211 01
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
++..+++++|+||+++|... ......+.+..|+.....+++.+.+.....++|++|..
T Consensus 61 ------d~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNP 119 (314)
T 1mld_A 61 ------QLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNP 119 (314)
T ss_dssp ------GHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred ------CHHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCC
Confidence 46778899999999999764 23444567788999999999998887334577776655
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=1.8e-06 Score=76.64 Aligned_cols=121 Identities=12% Similarity=0.069 Sum_probs=78.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccE-----EEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKH-----IYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~-----V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+||.||||+|++|++++..|+..|. +.. |.++++.+..........++ .... .+-..
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~-~~e~~~~~l~L~Di~~~~~~~~g~a~DL---------~~~~---~~~~~---- 65 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSV-FGKDQPIILVLLDITPMMGVLDGVLMEL---------QDCA---LPLLK---- 65 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTT-TCTTCCEEEEEECCGGGHHHHHHHHHHH---------HHTC---CTTEE----
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCC-ccccCCCEEEEEeCCCccccchhhHhhh---------Hhhh---hcccC----
Confidence 47899999999999999999987753 122 77777753211111111111 1100 01111
Q ss_pred cCCCCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCc--eEEEEeCC
Q psy17679 119 DCSLPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLK--AFVHVSTA 188 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~--r~i~iSS~ 188 (303)
++.-.. .....++++|+||++||... ...+..++++.|+.....+++.+.+. +.+ +++.+|..
T Consensus 66 ~~~~~~------~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~-~~~~~~vivvsNP 131 (333)
T 5mdh_A 66 DVIATD------KEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY-AKKSVKVIVVGNP 131 (333)
T ss_dssp EEEEES------CHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH-SCTTCEEEECSSS
T ss_pred CEEEcC------CcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEcCCc
Confidence 111111 25677889999999999754 34456678899999999999999998 543 57777765
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=98.21 E-value=2.5e-05 Score=70.09 Aligned_cols=86 Identities=12% Similarity=0.083 Sum_probs=59.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHH-hcCCCccEEEEEeCCCCccc---------HHHHH-HHHHHhHHHhhhhccCcCcC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLL-RSCPHLKHIYLLVRPKKGKD---------IQERL-DAIFEDRLFWRLRAEVPDFR 110 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll-~~g~~v~~V~~~~R~~~~~~---------~~~~l-~~l~~~~~~~~~~~~~~~~~ 110 (303)
..+|++|||||+.++|.+.+..|. ..|.. |+++.|...... ..... +...+. .
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~---vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~-------------G 111 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAA---TIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE-------------G 111 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCE---EEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH-------------T
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCC---EEEEecCCcccccccccccchhHHHHHHHHHHc-------------C
Confidence 357999999999999999999987 56766 777777543211 01111 111111 2
Q ss_pred CceEEEEecCCCCCCCCCHHHHHHHhc-------cccEEEEcceec
Q psy17679 111 SKVSAVAGDCSLPGLGLSETDRATLVK-------QVNIVFHGAATV 149 (303)
Q Consensus 111 ~~v~~~~~Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~ 149 (303)
.....+.+|+++.+ .+..+++ ++|++||+++..
T Consensus 112 ~~a~~i~~Dv~d~e------~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 112 LYSVTIDGDAFSDE------IKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp CCEEEEESCTTSHH------HHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred CCceeEeCCCCCHH------HHHHHHHHHHHhcCCCCEEEEecccc
Confidence 57789999999976 4444443 799999999975
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=3.7e-06 Score=70.23 Aligned_cols=79 Identities=23% Similarity=0.229 Sum_probs=54.2
Q ss_pred cCCcEEEEeCC----------------cchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhcc
Q psy17679 42 YRDKTIFLTGG----------------TGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAE 105 (303)
Q Consensus 42 ~~~~~vlItGa----------------tG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~ 105 (303)
+++|+|||||| +|.+|+++++.|.+.|++ |+++.|+.....
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~---V~l~~~~~~l~~-------------------- 62 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGAN---VTLVSGPVSLPT-------------------- 62 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCE---EEEEECSCCCCC--------------------
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCE---EEEEECCccccc--------------------
Confidence 67899999999 799999999999999998 777777542100
Q ss_pred CcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccc
Q psy17679 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRF 151 (303)
Q Consensus 106 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~ 151 (303)
..++. ..|+.+..- -...+...+.++|++||+||..++
T Consensus 63 ----~~g~~--~~dv~~~~~--~~~~v~~~~~~~Dili~~Aav~d~ 100 (226)
T 1u7z_A 63 ----PPFVK--RVDVMTALE--MEAAVNASVQQQNIFIGCAAVADY 100 (226)
T ss_dssp ----CTTEE--EEECCSHHH--HHHHHHHHGGGCSEEEECCBCCSE
T ss_pred ----CCCCe--EEccCcHHH--HHHHHHHhcCCCCEEEECCcccCC
Confidence 02332 456665320 011222334589999999998654
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.15 E-value=2.2e-05 Score=61.45 Aligned_cols=79 Identities=8% Similarity=0.157 Sum_probs=57.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|.+++|+|+|+ |.+|+.+++.|.+.|++ |++++|++.. ..+.+...+ ..++.++.+|.+
T Consensus 1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~---V~vid~~~~~--~~~~~~~~~---------------~~~~~~i~gd~~ 59 (153)
T 1id1_A 1 HRKDHFIVCGH-SILAINTILQLNQRGQN---VTVISNLPED--DIKQLEQRL---------------GDNADVIPGDSN 59 (153)
T ss_dssp CCCSCEEEECC-SHHHHHHHHHHHHTTCC---EEEEECCCHH--HHHHHHHHH---------------CTTCEEEESCTT
T ss_pred CCCCcEEEECC-CHHHHHHHHHHHHCCCC---EEEEECCChH--HHHHHHHhh---------------cCCCeEEEcCCC
Confidence 34578999995 99999999999999988 8888886311 111221111 146889999998
Q ss_pred CCCCCCCHHHHHHH-hccccEEEEcce
Q psy17679 122 LPGLGLSETDRATL-VKQVNIVFHGAA 147 (303)
Q Consensus 122 d~~~~~~~~~~~~~-~~~~dvVi~~a~ 147 (303)
+++ .+..+ ++++|.||-+.+
T Consensus 60 ~~~------~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 60 DSS------VLKKAGIDRCRAILALSD 80 (153)
T ss_dssp SHH------HHHHHTTTTCSEEEECSS
T ss_pred CHH------HHHHcChhhCCEEEEecC
Confidence 865 56665 779999998765
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.04 E-value=5.7e-06 Score=75.61 Aligned_cols=84 Identities=17% Similarity=0.186 Sum_probs=58.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
|++|+|+|| |++|+.+++.|.+.|.-...|.+.+|+.... +.+.+.+.. ....++.++.+|+++.
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~---~~la~~l~~-----------~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKC---QEIAQSIKA-----------KGYGEIDITTVDADSI 65 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHH---HHHHHHHHH-----------TTCCCCEEEECCTTCH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHH---HHHHHHhhh-----------hcCCceEEEEecCCCH
Confidence 368999998 9999999999999863113488999974321 111111110 0013688899999986
Q ss_pred CCCCCHHHHHHHhcc--ccEEEEccee
Q psy17679 124 GLGLSETDRATLVKQ--VNIVFHGAAT 148 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~--~dvVi~~a~~ 148 (303)
+ ++..++++ +|+|||+++.
T Consensus 66 ~------~l~~~l~~~~~DvVin~ag~ 86 (405)
T 4ina_A 66 E------ELVALINEVKPQIVLNIALP 86 (405)
T ss_dssp H------HHHHHHHHHCCSEEEECSCG
T ss_pred H------HHHHHHHhhCCCEEEECCCc
Confidence 6 78888886 9999999985
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=2e-05 Score=61.89 Aligned_cols=108 Identities=16% Similarity=0.110 Sum_probs=66.9
Q ss_pred ccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEE
Q psy17679 37 PMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAV 116 (303)
Q Consensus 37 ~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~ 116 (303)
.|.....+++|+|+|+ |.+|..+++.|.+.|++ |++++|++..... + ....++.++
T Consensus 12 ~~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~---V~vid~~~~~~~~---------------~-----~~~~g~~~~ 67 (155)
T 2g1u_A 12 HMSKKQKSKYIVIFGC-GRLGSLIANLASSSGHS---VVVVDKNEYAFHR---------------L-----NSEFSGFTV 67 (155)
T ss_dssp -----CCCCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCGGGGGG---------------S-----CTTCCSEEE
T ss_pred hhhcccCCCcEEEECC-CHHHHHHHHHHHhCCCe---EEEEECCHHHHHH---------------H-----HhcCCCcEE
Confidence 3555567789999995 99999999999999886 8899987542210 0 001355677
Q ss_pred EecCCCCCCCCCHHHHHHH-hccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 117 AGDCSLPGLGLSETDRATL-VKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 117 ~~Dl~d~~~~~~~~~~~~~-~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
.+|..+.+ .+..+ ++++|+||.+.+.. . .| ..+...++...+..+++...+.
T Consensus 68 ~~d~~~~~------~l~~~~~~~ad~Vi~~~~~~------~----~~----~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 68 VGDAAEFE------TLKECGMEKADMVFAFTNDD------S----TN----FFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp ESCTTSHH------HHHTTTGGGCSEEEECSSCH------H----HH----HHHHHHHHHTSCCSEEEEECSS
T ss_pred EecCCCHH------HHHHcCcccCCEEEEEeCCc------H----HH----HHHHHHHHHHCCCCeEEEEECC
Confidence 78876543 34444 56899999887631 1 11 2445566653255566655544
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.02 E-value=4.4e-06 Score=75.31 Aligned_cols=73 Identities=15% Similarity=0.269 Sum_probs=56.0
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|||+|.|| |++|+.+++.|.+. ++ |.+.+|+.. +++++ .+.+..+..|+.|
T Consensus 15 ~~mkilvlGa-G~vG~~~~~~L~~~-~~---v~~~~~~~~------~~~~~----------------~~~~~~~~~d~~d 67 (365)
T 3abi_A 15 RHMKVLILGA-GNIGRAIAWDLKDE-FD---VYIGDVNNE------NLEKV----------------KEFATPLKVDASN 67 (365)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHTTT-SE---EEEEESCHH------HHHHH----------------TTTSEEEECCTTC
T ss_pred CccEEEEECC-CHHHHHHHHHHhcC-CC---eEEEEcCHH------HHHHH----------------hccCCcEEEecCC
Confidence 4578999998 99999999998664 55 888888632 22222 1456778899988
Q ss_pred CCCCCCHHHHHHHhccccEEEEccee
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAAT 148 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~ 148 (303)
.+ ++..+++++|+||++++.
T Consensus 68 ~~------~l~~~~~~~DvVi~~~p~ 87 (365)
T 3abi_A 68 FD------KLVEVMKEFELVIGALPG 87 (365)
T ss_dssp HH------HHHHHHTTCSEEEECCCG
T ss_pred HH------HHHHHHhCCCEEEEecCC
Confidence 76 788999999999999875
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.99 E-value=1.1e-05 Score=74.88 Aligned_cols=79 Identities=16% Similarity=0.214 Sum_probs=57.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
.+++++|+|+|+ |++|+.++..|++. |++ |++++|+.. +.+++... .++.++.+|
T Consensus 20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~---V~v~~R~~~------ka~~la~~--------------~~~~~~~~D 75 (467)
T 2axq_A 20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDIN---VTVACRTLA------NAQALAKP--------------SGSKAISLD 75 (467)
T ss_dssp ---CEEEEEECC-STTHHHHHHHHHTSTTEE---EEEEESSHH------HHHHHHGG--------------GTCEEEECC
T ss_pred CCCCCEEEEECC-hHHHHHHHHHHHhCCCCe---EEEEECCHH------HHHHHHHh--------------cCCcEEEEe
Confidence 456789999997 99999999999988 444 999999742 22222111 245677889
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcceec
Q psy17679 120 CSLPGLGLSETDRATLVKQVNIVFHGAATV 149 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~~dvVi~~a~~~ 149 (303)
+.+.+ ++..+++++|+|||+++..
T Consensus 76 ~~d~~------~l~~~l~~~DvVIn~tp~~ 99 (467)
T 2axq_A 76 VTDDS------ALDKVLADNDVVISLIPYT 99 (467)
T ss_dssp TTCHH------HHHHHHHTSSEEEECSCGG
T ss_pred cCCHH------HHHHHHcCCCEEEECCchh
Confidence 88754 6777888999999999864
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.90 E-value=3.5e-05 Score=68.60 Aligned_cols=122 Identities=9% Similarity=0.058 Sum_probs=76.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.|.++||.|+|++|++|.+++..|+..|. ...|.++++.+... .....++ .+..+ + ..++.+
T Consensus 5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~-~~evvLiDi~~~k~--~g~a~DL-~~~~~-------~--~~~i~~----- 66 (343)
T 3fi9_A 5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRL-TPNLCLYDPFAVGL--EGVAEEI-RHCGF-------E--GLNLTF----- 66 (343)
T ss_dssp CSCSSEEEEETTTSHHHHHHHHHHHHTTC-CSCEEEECSCHHHH--HHHHHHH-HHHCC-------T--TCCCEE-----
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhcCC-CCEEEEEeCCchhH--HHHHHhh-hhCcC-------C--CCceEE-----
Confidence 46778999999999999999999999874 12388888853211 1111111 11100 0 012221
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCc-eEEEEeCC
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLK-AFVHVSTA 188 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~-r~i~iSS~ 188 (303)
+. ++...++++|+||.+||... ......+++..|....+.+++.+.+..... .++.+|..
T Consensus 67 t~--------d~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNP 128 (343)
T 3fi9_A 67 TS--------DIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNP 128 (343)
T ss_dssp ES--------CHHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSS
T ss_pred cC--------CHHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCc
Confidence 11 36677899999999999753 344566788899999999999998873233 35666654
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00023 Score=59.04 Aligned_cols=73 Identities=12% Similarity=0.156 Sum_probs=55.1
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|+|+|+ |.+|+++++.|.+.|++ |+++++++. +++.+... .++.++.+|.++.+
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~---v~vid~~~~------~~~~l~~~--------------~~~~~i~gd~~~~~ 56 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYG---VVIINKDRE------LCEEFAKK--------------LKATIIHGDGSHKE 56 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCC---EEEEESCHH------HHHHHHHH--------------SSSEEEESCTTSHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCe---EEEEECCHH------HHHHHHHH--------------cCCeEEEcCCCCHH
Confidence 57999995 99999999999999998 888888643 22222111 46789999999865
Q ss_pred CCCCHHHHHHH-hccccEEEEcce
Q psy17679 125 LGLSETDRATL-VKQVNIVFHGAA 147 (303)
Q Consensus 125 ~~~~~~~~~~~-~~~~dvVi~~a~ 147 (303)
.+..+ ++++|+||-+.+
T Consensus 57 ------~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 57 ------ILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp ------HHHHHTCCTTCEEEECCS
T ss_pred ------HHHhcCcccCCEEEEecC
Confidence 56655 578999997655
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00011 Score=59.15 Aligned_cols=75 Identities=12% Similarity=0.149 Sum_probs=55.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+.+++|+|+| .|.+|..+++.|.+. |++ |++++|++. +++.+.. .++.++.+|.
T Consensus 37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~---V~vid~~~~------~~~~~~~---------------~g~~~~~gd~ 91 (183)
T 3c85_A 37 PGHAQVLILG-MGRIGTGAYDELRARYGKI---SLGIEIREE------AAQQHRS---------------EGRNVISGDA 91 (183)
T ss_dssp CTTCSEEEEC-CSHHHHHHHHHHHHHHCSC---EEEEESCHH------HHHHHHH---------------TTCCEEECCT
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHhccCCe---EEEEECCHH------HHHHHHH---------------CCCCEEEcCC
Confidence 4567899998 699999999999998 998 889998743 2222211 3567888998
Q ss_pred CCCCCCCCHHHHHHH--hccccEEEEcce
Q psy17679 121 SLPGLGLSETDRATL--VKQVNIVFHGAA 147 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~--~~~~dvVi~~a~ 147 (303)
++.+ .+..+ ++++|+||.+.+
T Consensus 92 ~~~~------~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 92 TDPD------FWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp TCHH------HHHTBCSCCCCCEEEECCS
T ss_pred CCHH------HHHhccCCCCCCEEEEeCC
Confidence 8754 45555 568999998765
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00026 Score=54.44 Aligned_cols=72 Identities=22% Similarity=0.242 Sum_probs=54.3
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
++|+|.|+ |.+|..+++.|.+.|++ |+++++++. +++.+.. .++.++.+|.++.+
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g~~---v~vid~~~~------~~~~~~~---------------~g~~~i~gd~~~~~ 62 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASDIP---LVVIETSRT------RVDELRE---------------RGVRAVLGNAANEE 62 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCC---EEEEESCHH------HHHHHHH---------------TTCEEEESCTTSHH
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCC---EEEEECCHH------HHHHHHH---------------cCCCEEECCCCCHH
Confidence 57999985 99999999999999998 999999743 2222221 47788999998865
Q ss_pred CCCCHHHHHHH-hccccEEEEcce
Q psy17679 125 LGLSETDRATL-VKQVNIVFHGAA 147 (303)
Q Consensus 125 ~~~~~~~~~~~-~~~~dvVi~~a~ 147 (303)
.+..+ .+++|+||-+.+
T Consensus 63 ------~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 63 ------IMQLAHLECAKWLILTIP 80 (140)
T ss_dssp ------HHHHTTGGGCSEEEECCS
T ss_pred ------HHHhcCcccCCEEEEECC
Confidence 34443 468899987765
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00028 Score=61.94 Aligned_cols=85 Identities=11% Similarity=0.030 Sum_probs=56.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++++++|+|+ |.+|++++..|.+.|.. +|+++.|+.+.....+.+.+.+... ..+.+...++.
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~--~V~i~nR~~~~~~~a~~la~~~~~~-------------~~~~~~~~~~~ 215 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGVK--EISIFNRKDDFYANAEKTVEKINSK-------------TDCKAQLFDIE 215 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCS--EEEEEECSSTTHHHHHHHHHHHHHH-------------SSCEEEEEETT
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCCC--EEEEEECCCchHHHHHHHHHHhhhh-------------cCCceEEeccc
Confidence 56789999996 89999999999999872 4999999743222222222211110 12334444555
Q ss_pred CCCCCCCHHHHHHHhccccEEEEccee
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAAT 148 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~ 148 (303)
+.+ ++...+.++|+||++...
T Consensus 216 ~~~------~l~~~l~~aDiIINaTp~ 236 (315)
T 3tnl_A 216 DHE------QLRKEIAESVIFTNATGV 236 (315)
T ss_dssp CHH------HHHHHHHTCSEEEECSST
T ss_pred hHH------HHHhhhcCCCEEEECccC
Confidence 432 566777899999999875
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00012 Score=59.64 Aligned_cols=37 Identities=16% Similarity=0.191 Sum_probs=32.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+++|+|+||+|.+|..+++.+...|.. |++++|++
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~---V~~~~~~~ 73 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGAR---IYTTAGSD 73 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCE---EEEEESSH
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCE---EEEEeCCH
Confidence 35689999999999999999999999876 88888863
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.002 Score=57.24 Aligned_cols=127 Identities=17% Similarity=0.063 Sum_probs=78.0
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCC----CccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEE
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCP----HLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSA 115 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~----~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~ 115 (303)
..|...||.|+||+|.||++++..|..... ....+.+++..+... ..+.+..-+.+ -.. ......
T Consensus 20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~-~~~Gva~DL~~--------~~~--~~~~~~ 88 (345)
T 4h7p_A 20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALK-ALAGVEAELED--------CAF--PLLDKV 88 (345)
T ss_dssp --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHH-HHHHHHHHHHH--------TTC--TTEEEE
T ss_pred CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccc-cchhhhhhhhh--------cCc--cCCCcE
Confidence 345667999999999999999998876521 112477777653211 11111111111 000 011222
Q ss_pred EEecCCCCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcC-CCceEEEEeCC
Q psy17679 116 VAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMK-DLKAFVHVSTA 188 (303)
Q Consensus 116 ~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~-~~~r~i~iSS~ 188 (303)
+.++ .....++++|+||-+||... ......++++.|..-.+.+.+.+.+.. +..+++.+|..
T Consensus 89 ~~~~-----------~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNP 152 (345)
T 4h7p_A 89 VVTA-----------DPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNP 152 (345)
T ss_dssp EEES-----------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred EEcC-----------ChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCC
Confidence 2222 24677899999999999764 456778899999999999999988752 22345566654
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0018 Score=57.17 Aligned_cols=120 Identities=14% Similarity=0.044 Sum_probs=76.5
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
..+||.|+|+ |++|..++..|+..|. +..|.++++++... +....-+.+. .+ -....+.+...|
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~-~~~l~l~D~~~~k~---~g~a~DL~~~----~~----~~~~~v~i~~~~--- 67 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGI-TDELVVIDVNKEKA---MGDVMDLNHG----KA----FAPQPVKTSYGT--- 67 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCHHHH---HHHHHHHHHT----GG----GSSSCCEEEEEC---
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEecchHHH---HHHHHHHHhc----cc----cccCCeEEEeCc---
Confidence 3578999995 9999999999999875 23588988853211 1111111111 00 001234443332
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
...++++|+||.++|... ......+++..|+.....+++.+.+......++.+|..
T Consensus 68 ----------~~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNP 124 (326)
T 3pqe_A 68 ----------YEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNP 124 (326)
T ss_dssp ----------GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred ----------HHHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCh
Confidence 134678999999999754 34456778889999999999999887333456666654
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0017 Score=56.88 Aligned_cols=118 Identities=11% Similarity=0.054 Sum_probs=77.0
Q ss_pred cEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
|||.|+||+|.+|.+++..|... +. ...+.++++.+ .. .....++. + . ....++..+.+ ++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~-~~el~L~Di~~-~~--~G~a~Dl~-~--------~--~~~~~v~~~~~--~~- 62 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAP-VT--PGVAVDLS-H--------I--PTAVKIKGFSG--ED- 62 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCT-TEEEEEECSST-TH--HHHHHHHH-T--------S--CSSEEEEEECS--SC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC-CceEEEEecCC-Cc--hhHHHHhh-C--------C--CCCceEEEecC--CC-
Confidence 58999999999999999999776 43 24588888875 21 11111111 0 0 00012222211 11
Q ss_pred CCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
....++++|+||-+||... ......++++.|+.-...+.+.+.+......++.+|..
T Consensus 63 --------~~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNP 120 (312)
T 3hhp_A 63 --------ATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120 (312)
T ss_dssp --------CHHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred --------cHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence 2467789999999999754 34567789999999999999998887333456666654
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0017 Score=57.16 Aligned_cols=122 Identities=12% Similarity=0.026 Sum_probs=77.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.|+++||.|+| +|.+|..++..|...|.. .|.++++++.... ....++ .+.... . .....+.-.+
T Consensus 2 ~m~~~kI~iiG-aG~vG~~~a~~l~~~~~~--~v~l~Di~~~~~~--g~a~dL-~~~~~~--~------~~~~~v~~t~- 66 (321)
T 3p7m_A 2 AMARKKITLVG-AGNIGGTLAHLALIKQLG--DVVLFDIAQGMPN--GKALDL-LQTCPI--E------GVDFKVRGTN- 66 (321)
T ss_dssp -CCCCEEEEEC-CSHHHHHHHHHHHHTTCC--EEEEECSSSSHHH--HHHHHH-HTTHHH--H------TCCCCEEEES-
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhCCCc--eEEEEeCChHHHH--HHHHHH-Hhhhhh--c------CCCcEEEEcC-
Confidence 46678999999 599999999999998762 5999998765321 111111 111000 0 0122222111
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
+ . ..++++|+||.++|... ......+++..|+.-...+++.+.+......++.+|..
T Consensus 67 -d---------~-~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNP 124 (321)
T 3p7m_A 67 -D---------Y-KDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNP 124 (321)
T ss_dssp -C---------G-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred -C---------H-HHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence 1 1 45678999999999753 34456678888999999999998887333456666544
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0036 Score=55.18 Aligned_cols=121 Identities=15% Similarity=0.091 Sum_probs=74.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|+++||.|+|+ |.+|..++..|...|+. .|.++++++..... ...++.....+. ....++.. ..|
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~--~v~L~Di~~~~~~g--~~~dl~~~~~~~-------~~~~~v~~-t~d-- 69 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKELG--DVVLFDIAEGTPQG--KGLDIAESSPVD-------GFDAKFTG-AND-- 69 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCC--EEEEECSSSSHHHH--HHHHHHHHHHHH-------TCCCCEEE-ESS--
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCCC--eEEEEeCCchhHHH--HHHHHhchhhhc-------CCCCEEEE-eCC--
Confidence 56789999997 99999999999999872 49999997654221 111111110000 00012221 122
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
+ ..++++|+||.++|... ......+++..|+.-...+++.+.+......++.+|..
T Consensus 70 ----------~-~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNP 126 (324)
T 3gvi_A 70 ----------Y-AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNP 126 (324)
T ss_dssp ----------G-GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred ----------H-HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCC
Confidence 2 45678999999999653 23344567788998889999888887333466666655
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0017 Score=56.37 Aligned_cols=119 Identities=15% Similarity=0.060 Sum_probs=75.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|+|+ |.+|.+++..|...|+ +..|.+.++++..... ...++ .+... .+ .....+.-.+
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~-~~~v~L~D~~~~~~~g--~~~dl-~~~~~-~~-------~~~~~i~~t~----- 62 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLD-VDEIALVDIAEDLAVG--EAMDL-AHAAA-GI-------DKYPKIVGGA----- 62 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSC-CSEEEEECSSHHHHHH--HHHHH-HHHHH-TT-------TCCCEEEEES-----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECChHHHHH--HHHHH-Hhhhh-hc-------CCCCEEEEeC-----
Confidence 58999998 9999999999999876 2359999987532110 00011 11000 00 0122222121
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
+ ..+++++|+||.++|... ......+++..|+.-.+.+.+.+.+......++.+|..
T Consensus 63 ------d-~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNP 120 (294)
T 1oju_A 63 ------D-YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP 120 (294)
T ss_dssp ------C-GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred ------C-HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCc
Confidence 1 245678999999999753 34456778888999999999999887334566666654
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00099 Score=59.24 Aligned_cols=38 Identities=11% Similarity=0.074 Sum_probs=33.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..+++|+|+|++|.+|..+++.+...|.. |++++|++.
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~---V~~~~~~~~ 205 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYR---VLGIDGGEG 205 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECSTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCc---EEEEcCCHH
Confidence 35689999999999999999999988876 889998754
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0015 Score=57.21 Aligned_cols=86 Identities=14% Similarity=0.109 Sum_probs=54.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
.++++++|+|+ |.+|++++..|.+.|.. +|++..|+.......+.+.+.+... ....+...++.
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~~--~v~v~nRt~~~~~~a~~la~~~~~~-------------~~~~v~~~~~~ 209 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGIK--EIKLFNRKDDFFEKAVAFAKRVNEN-------------TDCVVTVTDLA 209 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCS--EEEEEECSSTHHHHHHHHHHHHHHH-------------SSCEEEEEETT
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCCC--EEEEEECCCchHHHHHHHHHHhhhc-------------cCcceEEechH
Confidence 46789999996 99999999999999763 4999999854322222222211110 12333334444
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceec
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATV 149 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~ 149 (303)
+.+ .+...+.+.|+|||+.+..
T Consensus 210 ~l~------~~~~~l~~~DiIINaTp~G 231 (312)
T 3t4e_A 210 DQH------AFTEALASADILTNGTKVG 231 (312)
T ss_dssp CHH------HHHHHHHHCSEEEECSSTT
T ss_pred hhh------hhHhhccCceEEEECCcCC
Confidence 321 2355667899999997753
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.002 Score=56.85 Aligned_cols=120 Identities=15% Similarity=0.125 Sum_probs=65.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
..++||.|+|+ |.+|++++..|+..|. +..|.++++++... +....-+.+. .+ ....+.+...|
T Consensus 7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~~k~---~g~a~DL~~~--------~~-~~~~~~i~~~~-- 70 (326)
T 3vku_A 7 KDHQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIFKDKT---KGDAIDLEDA--------LP-FTSPKKIYSAE-- 70 (326)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCHHHH---HHHHHHHHTT--------GG-GSCCCEEEECC--
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCChHHH---HHHHhhHhhh--------hh-hcCCcEEEECc--
Confidence 34579999996 9999999999999865 24588888853211 1111111110 00 01233333222
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
...++++|+||.+||... ......++++.|+.-.+.+.+.+.+......++.+|..
T Consensus 71 -----------~~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNP 127 (326)
T 3vku_A 71 -----------YSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 127 (326)
T ss_dssp -----------GGGGTTCSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSS
T ss_pred -----------HHHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCc
Confidence 134678999999999753 23445678888998899999999887333455655544
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00044 Score=62.26 Aligned_cols=78 Identities=15% Similarity=0.210 Sum_probs=53.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+.+++|+|+|+ |.+|..+++.|...|.+ |++++|++. +++.+... .... +.+|.
T Consensus 163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~---V~~~d~~~~------~~~~~~~~------------~g~~---~~~~~ 217 (369)
T 2eez_A 163 GVAPASVVILGG-GTVGTNAAKIALGMGAQ---VTILDVNHK------RLQYLDDV------------FGGR---VITLT 217 (369)
T ss_dssp BBCCCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH------------TTTS---EEEEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCE---EEEEECCHH------HHHHHHHh------------cCce---EEEec
Confidence 366799999998 99999999999999986 889998642 22211110 0012 34455
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceec
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATV 149 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~ 149 (303)
.+.. ++.+++.++|+||++++..
T Consensus 218 ~~~~------~l~~~~~~~DvVi~~~g~~ 240 (369)
T 2eez_A 218 ATEA------NIKKSVQHADLLIGAVLVP 240 (369)
T ss_dssp CCHH------HHHHHHHHCSEEEECCC--
T ss_pred CCHH------HHHHHHhCCCEEEECCCCC
Confidence 4433 5777788999999999864
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00082 Score=59.38 Aligned_cols=37 Identities=11% Similarity=0.088 Sum_probs=32.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+++|+|+||+|.+|..+++.+...|.. |++++|++
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~---V~~~~~~~ 180 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCK---VVGAAGSD 180 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCE---EEEEESSH
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 35689999999999999999999999886 88888863
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0052 Score=53.89 Aligned_cols=123 Identities=15% Similarity=0.139 Sum_probs=76.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|+.+||.|+|+ |.+|..++..|...|+ ..|.++++++..........++... . . +.. ...++.. -.|
T Consensus 6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~--~~v~l~D~~~~~~~~~g~a~dl~~~-~-~-~~~----~~~~i~~-t~d-- 72 (315)
T 3tl2_A 6 IKRKKVSVIGA-GFTGATTAFLLAQKEL--ADVVLVDIPQLENPTKGKALDMLEA-S-P-VQG----FDANIIG-TSD-- 72 (315)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCGGGHHHHHHHHHHHHHH-H-H-HHT----CCCCEEE-ESC--
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeccchHHHHHHhhhhHHHh-h-h-hcc----CCCEEEE-cCC--
Confidence 34579999996 9999999999999887 2488999863111111111111110 0 0 000 0012221 111
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
...++++|+||-++|... ......+++..|+.-.+.+.+.+.+......++.+|..
T Consensus 73 -----------~~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNP 129 (315)
T 3tl2_A 73 -----------YADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNP 129 (315)
T ss_dssp -----------GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred -----------HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCCh
Confidence 134678999999999754 34456788889999999999988887333456666654
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.011 Score=52.26 Aligned_cols=114 Identities=15% Similarity=0.068 Sum_probs=70.7
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCC-CccEEEEEeCCCCcccH-HHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCP-HLKHIYLLVRPKKGKDI-QERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~-~v~~V~~~~R~~~~~~~-~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
.+||.|+|| |.+|..++..|...|+ + |.+.++++..... ...+.+... .+. ...++.+. .
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~---V~L~D~~~~~~~~~~~~l~~~~~-----~~~-----~~~~i~~t-~--- 70 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALRELAD---VVLYDVVKGMPEGKALDLSHVTS-----VVD-----TNVSVRAE-Y--- 70 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCE---EEEECSSSSHHHHHHHHHHHHHH-----HTT-----CCCCEEEE-C---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCe---EEEEECChhHHHHHHHHHHhhhh-----ccC-----CCCEEEEe-C---
Confidence 368999997 9999999999999987 4 8899997643221 111111110 000 01222211 1
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc-cc-----cHHHHHhhhHHHHHHHHHHHHhcCCCceEEEE
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF-DE-----HIKMAVKINVCGVQAMLQLAREMKDLKAFVHV 185 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~-----~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~i 185 (303)
++...++++|+||-+++.... .. ........|+.-...+.+.+.+. ...-++.+
T Consensus 71 ---------d~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~ 130 (331)
T 1pzg_A 71 ---------SYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIV 130 (331)
T ss_dssp ---------SHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred ---------CHHHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEE
Confidence 355678899999999986532 22 34455666887788888888776 43334333
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0011 Score=58.45 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=32.1
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+++|+|+||+|.+|..+++.+...|.+ |++++|++
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~---V~~~~~~~ 175 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAK---LIGTVGTA 175 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCE---EEEEESSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCE---EEEEeCCH
Confidence 4689999999999999999999999886 88888863
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0048 Score=53.98 Aligned_cols=117 Identities=17% Similarity=0.172 Sum_probs=68.1
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
+||.|+|+ |.+|..++..|...|+ +. |.++++++.... ....++. +.. .... ...++... .|
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~-~~-v~L~Di~~~~~~--g~~~dl~-~~~----~~~~--~~~~i~~t-~d----- 64 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKEL-GD-IVLLDIVEGVPQ--GKALDLY-EAS----PIEG--FDVRVTGT-NN----- 64 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-SE-EEEECSSSSHHH--HHHHHHH-TTH----HHHT--CCCCEEEE-SC-----
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC-Ce-EEEEeCCccHHH--HHHHhHH-HhH----hhcC--CCeEEEEC-CC-----
Confidence 68999998 9999999999998876 12 888888754222 1111111 100 0000 00122211 22
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
+ ..++++|+||.++|.... ......+...|......+.+.+.+. ....++.+.|-
T Consensus 65 -------~-~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~tN 120 (309)
T 1ur5_A 65 -------Y-ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIMVNN 120 (309)
T ss_dssp -------G-GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGG-CTTCEEEECCS
T ss_pred -------H-HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEcCC
Confidence 3 446789999999987542 2223345666888888888888887 45555544443
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.011 Score=51.75 Aligned_cols=119 Identities=12% Similarity=-0.007 Sum_probs=73.9
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|+|+ |.+|..++..|+..|. +..|.++++++..... ...++. +.... . .....+.-.| +
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~~k~~g--~a~DL~-~~~~~--~------~~~~~v~~~~--~-- 63 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDV-AKEVVMVDIKDGMPQG--KALDMR-ESSPI--H------GFDTRVTGTN--D-- 63 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-SSEEEEECSSTTHHHH--HHHHHH-HHHHH--H------TCCCEEEEES--S--
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCchHHHHH--HHHHHh-ccccc--c------CCCcEEEECC--C--
Confidence 68999996 9999999999999876 3469999998753221 111111 11000 0 0122222122 1
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
...++++|+||-++|... ......+++..|+.-.+.+.+.+.+......++.+|..
T Consensus 64 --------~~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNP 120 (314)
T 3nep_X 64 --------YGPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANP 120 (314)
T ss_dssp --------SGGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSS
T ss_pred --------HHHhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCc
Confidence 135678899999999753 33445678888999999999999887333456666654
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0017 Score=59.21 Aligned_cols=74 Identities=12% Similarity=0.188 Sum_probs=56.0
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+++|+|+|. |-+|..+++.|.+.|++ |+++++++. +++.+.. .++.++.||.++
T Consensus 3 ~~~~viIiG~-Gr~G~~va~~L~~~g~~---vvvId~d~~------~v~~~~~---------------~g~~vi~GDat~ 57 (413)
T 3l9w_A 3 HGMRVIIAGF-GRFGQITGRLLLSSGVK---MVVLDHDPD------HIETLRK---------------FGMKVFYGDATR 57 (413)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCC---EEEEECCHH------HHHHHHH---------------TTCCCEESCTTC
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCC---EEEEECCHH------HHHHHHh---------------CCCeEEEcCCCC
Confidence 3467999995 99999999999999988 889998753 2222221 467789999998
Q ss_pred CCCCCCHHHHHHH-hccccEEEEcce
Q psy17679 123 PGLGLSETDRATL-VKQVNIVFHGAA 147 (303)
Q Consensus 123 ~~~~~~~~~~~~~-~~~~dvVi~~a~ 147 (303)
.+ .+..+ ++++|+||-+.+
T Consensus 58 ~~------~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 58 MD------LLESAGAAKAEVLINAID 77 (413)
T ss_dssp HH------HHHHTTTTTCSEEEECCS
T ss_pred HH------HHHhcCCCccCEEEECCC
Confidence 76 45555 568999987765
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00041 Score=57.09 Aligned_cols=34 Identities=29% Similarity=0.359 Sum_probs=30.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|+|+|+||+|.+|++++..|.+.|++ |++++|++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~---V~~~~r~~ 34 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHE---IVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCE---EEEEESSH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 57999999999999999999999886 88889864
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0014 Score=57.96 Aligned_cols=37 Identities=14% Similarity=0.115 Sum_probs=32.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+++|+|+||+|.+|..+++.+...|.. |++++|++
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~---Vi~~~~~~ 180 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGAT---VIGTVSTE 180 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCE---EEEEESSH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 35689999999999999999999999876 88998864
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0021 Score=55.56 Aligned_cols=80 Identities=11% Similarity=0.165 Sum_probs=52.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
.++++++|+|+ |.+|+.++..|.+.|.. +|++..|+..+. +.+.+.+... ...+.+...++.
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~--~v~i~~R~~~~a---~~la~~~~~~------------~~~~~i~~~~~~ 186 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQ--KLQVADLDTSRA---QALADVINNA------------VGREAVVGVDAR 186 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTCS--EEEEECSSHHHH---HHHHHHHHHH------------HTSCCEEEECST
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCC--EEEEEECCHHHH---HHHHHHHHhh------------cCCceEEEcCHH
Confidence 56789999997 89999999999999763 488899974321 2222211110 012223333322
Q ss_pred CCCCCCCHHHHHHHhccccEEEEccee
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAAT 148 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~ 148 (303)
++...+.++|+||++...
T Consensus 187 ---------~l~~~l~~~DiVInaTp~ 204 (283)
T 3jyo_A 187 ---------GIEDVIAAADGVVNATPM 204 (283)
T ss_dssp ---------THHHHHHHSSEEEECSST
T ss_pred ---------HHHHHHhcCCEEEECCCC
Confidence 366677889999999875
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0016 Score=55.25 Aligned_cols=43 Identities=21% Similarity=0.213 Sum_probs=34.3
Q ss_pred CccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 36 TPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 36 ~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+.+..+++++|+|.| .|.+|+.+++.|...|.. +|++++++.
T Consensus 23 ~~~q~~l~~~~VlVvG-~Gg~G~~va~~La~~Gv~--~i~lvD~d~ 65 (249)
T 1jw9_B 23 FDGQEALKDSRVLIVG-LGGLGCAASQYLASAGVG--NLTLLDFDT 65 (249)
T ss_dssp HHHHHHHHHCEEEEEC-CSHHHHHHHHHHHHHTCS--EEEEECCCB
T ss_pred HHHHHHHhCCeEEEEe-eCHHHHHHHHHHHHcCCC--eEEEEcCCC
Confidence 3344456778999999 589999999999999863 488888875
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0016 Score=57.81 Aligned_cols=35 Identities=26% Similarity=0.306 Sum_probs=28.6
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEe
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLV 78 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~ 78 (303)
++||+|.||+|.+|+.+++.|.++++....|..+.
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~ 40 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA 40 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 46899999999999999999997776655565554
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0081 Score=52.09 Aligned_cols=119 Identities=14% Similarity=0.054 Sum_probs=75.7
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|+|+ |.+|.+++..|+.++. +..+.+++..+... .....++ .+.. + ...........+ |
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~-~~el~L~Di~~~~~--~G~a~DL-~h~~----~----~~~~~~~i~~~~--d-- 63 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLD-VDEIALVDIAEDLA--VGEAMDL-AHAA----A----GIDKYPKIVGGA--D-- 63 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSC-CSEEEEECSSHHHH--HHHHHHH-HHHH----G----GGTCCCEEEEES--C--
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEeCCCCcc--hhhhhhh-hccc----c----cCCCCCeEecCC--C--
Confidence 68999995 9999999999988854 45688888764221 1111111 1100 0 000122222221 1
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
+ ..+++.|+||-.||... ......+++..|..-.+.+.+.+.+......++.+|..
T Consensus 64 -------~-~~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNP 120 (294)
T 2x0j_A 64 -------Y-SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP 120 (294)
T ss_dssp -------G-GGGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred -------H-HHhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCc
Confidence 1 23578899999999765 45677889999999999999999887333455656555
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=96.89 E-value=0.002 Score=53.88 Aligned_cols=72 Identities=15% Similarity=0.091 Sum_probs=51.5
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
..++|+|+|+ |.+|+.+++.|.+.|+ |++++|++.. ++.+. .++.++.+|.++
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~~~g~----v~vid~~~~~------~~~~~----------------~~~~~i~gd~~~ 60 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELRGSEV----FVLAEDENVR------KKVLR----------------SGANFVHGDPTR 60 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHSTTSEE----EEEESCGGGH------HHHHH----------------TTCEEEESCTTC
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCe----EEEEECCHHH------HHHHh----------------cCCeEEEcCCCC
Confidence 3468999996 9999999999988764 5677776431 11110 357899999988
Q ss_pred CCCCCCHHHHHHH-hccccEEEEcce
Q psy17679 123 PGLGLSETDRATL-VKQVNIVFHGAA 147 (303)
Q Consensus 123 ~~~~~~~~~~~~~-~~~~dvVi~~a~ 147 (303)
.+ .+..+ ++++|.||.+.+
T Consensus 61 ~~------~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 61 VS------DLEKANVRGARAVIVDLE 80 (234)
T ss_dssp HH------HHHHTTCTTCSEEEECCS
T ss_pred HH------HHHhcCcchhcEEEEcCC
Confidence 65 56665 679999997754
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0016 Score=58.02 Aligned_cols=37 Identities=11% Similarity=0.112 Sum_probs=32.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+++|+|+||+|.+|..+++.+...|.. |++++|++
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~---Vi~~~~~~ 205 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLK---ILGTAGTE 205 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESSH
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCh
Confidence 34689999999999999999999999876 88888864
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0053 Score=53.16 Aligned_cols=42 Identities=24% Similarity=0.225 Sum_probs=32.3
Q ss_pred ccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 37 PMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 37 ~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
+-+..++.++|+|.| .|.+|+.+++.|...|.. ++++++++.
T Consensus 29 ~~q~kL~~~~VlVvG-aGGlGs~va~~La~aGVG--~i~lvD~D~ 70 (292)
T 3h8v_A 29 SDYEKIRTFAVAIVG-VGGVGSVTAEMLTRCGIG--KLLLFDYDK 70 (292)
T ss_dssp ---CGGGGCEEEEEC-CSHHHHHHHHHHHHHTCS--EEEEECCCB
T ss_pred HHHHHHhCCeEEEEC-cCHHHHHHHHHHHHcCCC--EEEEECCCc
Confidence 344567778999998 589999999999999753 588877764
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0019 Score=57.60 Aligned_cols=37 Identities=5% Similarity=0.071 Sum_probs=32.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+++|+|+||+|.+|..+++.+...|.. |++++|++
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~---Vi~~~~~~ 197 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAI---PLVTAGSQ 197 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCE---EEEEeCCH
Confidence 34689999999999999999999999876 88999864
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0094 Score=52.59 Aligned_cols=121 Identities=13% Similarity=0.066 Sum_probs=76.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
...+||.|+|+ |.+|..++..|+..|. +..|.+++++.... .....++ .+.. + .......+..+
T Consensus 17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~~~~--~g~a~DL-~~~~----~-----~~~~~~i~~~~-- 80 (331)
T 4aj2_A 17 VPQNKITVVGV-GAVGMACAISILMKDL-ADELALVDVIEDKL--KGEMMDL-QHGS----L-----FLKTPKIVSSK-- 80 (331)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSCHHHH--HHHHHHH-HHTG----G-----GCSCCEEEECS--
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEeCChHHH--HHHHHhh-hhhh----h-----ccCCCeEEEcC--
Confidence 45689999997 9999999999999875 24588888863211 1111111 1100 0 00111122111
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
| +. .++++|+||.+||... ......++++.|..-.+.+.+.+.+......++.+|..
T Consensus 81 d---------~~-~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNP 138 (331)
T 4aj2_A 81 D---------YS-VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNP 138 (331)
T ss_dssp S---------GG-GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred C---------HH-HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence 1 22 4689999999999754 34456788899999999999888887333466666655
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0051 Score=54.75 Aligned_cols=34 Identities=15% Similarity=0.098 Sum_probs=30.7
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCC-CccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCP-HLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~-~v~~V~~~~R~~ 81 (303)
++|+|+||+|.+|..+++.+...|. . |++++|++
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~---Vi~~~~~~ 196 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSR---VVGICGTH 196 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSE---EEEEESCH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCe---EEEEeCCH
Confidence 8999999999999999999999987 5 88888863
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0039 Score=53.49 Aligned_cols=36 Identities=22% Similarity=0.171 Sum_probs=31.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
+++++++|+|+ |.+|+.++..|.+.|.+ |++..|+.
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~---V~v~~R~~ 152 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLDCA---VTITNRTV 152 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCE---EEEECSSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCE---EEEEECCH
Confidence 46789999997 78999999999999865 88888874
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0045 Score=54.80 Aligned_cols=37 Identities=14% Similarity=0.119 Sum_probs=32.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+++|+|+||+|.+|..+++.+...|.. |++++|++
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~---V~~~~~~~ 190 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCY---VVGSAGSK 190 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 35689999999999999999999988875 88888863
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.039 Score=49.36 Aligned_cols=126 Identities=14% Similarity=0.093 Sum_probs=74.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCC--CccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCP--HLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~--~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
..+||.|+||+|.+|++++..|+..+. +...|.+.....+.. .+.++. .-..|.........++..
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~--~~~~~G-----~amDL~h~~~p~~~~v~i----- 98 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERS--FQALEG-----VAMELEDSLYPLLREVSI----- 98 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGG--HHHHHH-----HHHHHHTTTCTTEEEEEE-----
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccch--hhhhHH-----HHHhHHhhhhhhcCCcEE-----
Confidence 457999999999999999999988743 111143433222111 111110 001111111000011211
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeCC
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVSTA 188 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS~ 188 (303)
.+ .-...++++|+||-+||... ......++++.|..-.+.+.+.+.+. .....++.+|..
T Consensus 99 ~~--------~~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNP 160 (375)
T 7mdh_A 99 GI--------DPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNP 160 (375)
T ss_dssp ES--------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred ec--------CCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence 21 13567789999999999754 45667889999999999998888774 234566766665
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0028 Score=53.80 Aligned_cols=43 Identities=16% Similarity=0.099 Sum_probs=33.4
Q ss_pred CCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 35 GTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 35 ~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
+.+.+..++.++|+|.|+ |.+|+.+++.|...|.. +++++++.
T Consensus 19 g~~~q~~l~~~~VlvvG~-GglG~~va~~La~~Gvg--~i~lvD~d 61 (251)
T 1zud_1 19 ALDGQQKLLDSQVLIIGL-GGLGTPAALYLAGAGVG--TLVLADDD 61 (251)
T ss_dssp HHHHHHHHHTCEEEEECC-STTHHHHHHHHHHTTCS--EEEEECCC
T ss_pred CHHHHHHHhcCcEEEEcc-CHHHHHHHHHHHHcCCC--eEEEEeCC
Confidence 344445677889999995 78999999999999764 57777664
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=96.68 E-value=0.00088 Score=59.75 Aligned_cols=27 Identities=19% Similarity=0.410 Sum_probs=24.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSC 68 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g 68 (303)
|+++||.|.||||++|+.+++.|++++
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~ 33 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHP 33 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCH
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCC
Confidence 345799999999999999999999875
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.018 Score=50.45 Aligned_cols=115 Identities=18% Similarity=0.138 Sum_probs=69.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
++||.|+|+ |++|..++..|+..|. +..|.+++.++...... ..++ ....+ ....+.+.. .+
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~-~~ev~L~Di~~~~~~g~--~~dl---------~~~~~-~~~~~~i~~---~~- 68 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQT-ANELVLIDVFKEKAIGE--AMDI---------NHGLP-FMGQMSLYA---GD- 68 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTC-SSEEEEECCC---CCHH--HHHH---------TTSCC-CTTCEEEC-----C-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChHHHHHH--HHHH---------HHhHH-hcCCeEEEE---CC-
Confidence 468999997 9999999999998865 34599999876443311 1111 11110 111222221 11
Q ss_pred CCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEE
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHV 185 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~i 185 (303)
...++++|+||.+++... ......+.+..|+.....+++.+.+......++.+
T Consensus 69 ---------~~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~ 122 (318)
T 1y6j_A 69 ---------YSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV 122 (318)
T ss_dssp ---------GGGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred ---------HHHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence 234789999999999754 23344567788988889999988886233344444
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.028 Score=49.24 Aligned_cols=120 Identities=12% Similarity=0.093 Sum_probs=73.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|+++||.|+|+ |.+|..++..|+..|. +..|.++++++.... ....++ .+. .+ .....+.+.. |
T Consensus 4 m~~~KI~IIGa-G~vG~~la~~l~~~~~-~~ei~L~Di~~~~~~--g~~~dl-~~~----~~----~~~~~~~v~~-~-- 67 (317)
T 3d0o_A 4 FKGNKVVLIGN-GAVGSSYAFSLVNQSI-VDELVIIDLDTEKVR--GDVMDL-KHA----TP----YSPTTVRVKA-G-- 67 (317)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHCS-CSEEEEECSCHHHHH--HHHHHH-HHH----GG----GSSSCCEEEE-C--
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhHhh--hhhhhH-Hhh----hh----hcCCCeEEEe-C--
Confidence 45679999998 9999999999998864 345888887632111 111111 111 00 0002333332 2
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVST 187 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS 187 (303)
+ ..+++++|+||.+++.... ......++..|+.-...+.+.+.+......++.+|.
T Consensus 68 ~----------~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 124 (317)
T 3d0o_A 68 E----------YSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATN 124 (317)
T ss_dssp C----------GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred C----------HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 1 2346899999999997543 344556777888888888888888723334554443
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0029 Score=55.90 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=32.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+++|+|+||+|.+|..+++.+...|.+ |++++|++
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~---Vi~~~~~~ 184 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCR---VVGIAGGA 184 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 35689999999999999999999988886 88888864
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0043 Score=47.59 Aligned_cols=71 Identities=15% Similarity=0.239 Sum_probs=48.1
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+++|+|.|+ |.+|+.++..|.+.|++ |++.+|+.. +.+++... -++... ...
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~---v~v~~r~~~------~~~~~a~~--------------~~~~~~--~~~-- 72 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYK---VTVAGRNID------HVRAFAEK--------------YEYEYV--LIN-- 72 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCE---EEEEESCHH------HHHHHHHH--------------HTCEEE--ECS--
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCE---EEEEcCCHH------HHHHHHHH--------------hCCceE--eec--
Confidence 689999995 99999999999988765 888998743 22222111 012221 111
Q ss_pred CCCCCHHHHHHHhccccEEEEcceec
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATV 149 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~ 149 (303)
++..+++++|+||.+.+..
T Consensus 73 -------~~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 73 -------DIDSLIKNNDVIITATSSK 91 (144)
T ss_dssp -------CHHHHHHTCSEEEECSCCS
T ss_pred -------CHHHHhcCCCEEEEeCCCC
Confidence 3566778999999998764
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0044 Score=54.91 Aligned_cols=36 Identities=0% Similarity=-0.034 Sum_probs=31.9
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+++|||+|++|.+|..+++.+...|.. |++++|++
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~---Vi~~~~~~ 201 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGAR---VIATAGSE 201 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCE---EEEEESSH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 4689999999999999999999988876 88888864
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0095 Score=51.97 Aligned_cols=38 Identities=26% Similarity=0.433 Sum_probs=30.8
Q ss_pred cCCcE-EEEeC-Cc-----------------chhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKT-IFLTG-GT-----------------GFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~-vlItG-at-----------------G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
+.+++ ||||+ || |-.|.++++.++++|++ |+.+.|+.+
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~---V~lv~g~~s 90 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYG---VLFLYRARS 90 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCE---EEEEEETTS
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCE---EEEEecCCC
Confidence 56666 88885 45 77999999999999998 888887644
|
| >2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A | Back alignment and structure |
|---|
Probab=96.49 E-value=0.021 Score=49.75 Aligned_cols=116 Identities=13% Similarity=0.092 Sum_probs=70.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
..++||.|+|| |.+|..++..|+..|. +..|.++++++. . .....++.. +. .+++... .|
T Consensus 12 ~~~~kV~ViGa-G~vG~~~a~~l~~~g~-~~ev~L~Di~~~-~--~g~a~dl~~------~~------~~~i~~t-~d-- 71 (303)
T 2i6t_A 12 KTVNKITVVGG-GELGIACTLAISAKGI-ADRLVLLDLSEG-T--KGATMDLEI------FN------LPNVEIS-KD-- 71 (303)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECCC--------CHHHHHH------HT------CTTEEEE-SC--
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEcCCcc-h--HHHHHHHhh------hc------CCCeEEe-CC--
Confidence 34578999995 9999999999999986 345888888753 1 111111110 00 1244331 22
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
+ ..++++|+||-++|.........+++..|..-.+.+.+.+.+......++.+|..
T Consensus 72 ----------~-~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP 127 (303)
T 2i6t_A 72 ----------L-SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQP 127 (303)
T ss_dssp ----------G-GGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSS
T ss_pred ----------H-HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCCh
Confidence 2 4468899999999875433444566677888888888888776223345556654
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0041 Score=53.53 Aligned_cols=37 Identities=19% Similarity=0.287 Sum_probs=31.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCC-CccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCP-HLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~-~v~~V~~~~R~~~ 82 (303)
.++++++|+|+ |.+|+.++..|.+.|. + |++..|+..
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~---v~v~~R~~~ 152 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKIVRPT---LTVANRTMS 152 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTTCCSC---CEEECSCGG
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCE---EEEEeCCHH
Confidence 45689999995 8999999999999987 5 888999754
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0032 Score=53.99 Aligned_cols=39 Identities=26% Similarity=0.437 Sum_probs=29.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|+++||.|.|++|.+|+.+++.+.+. .++.-|-+++|+.
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~-~~~eLv~~~d~~~ 43 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAA-PDATLVGALDRTG 43 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHC-TTEEEEEEBCCTT
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEEecC
Confidence 56789999999999999999999876 3333355567764
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0052 Score=54.71 Aligned_cols=36 Identities=17% Similarity=0.336 Sum_probs=32.1
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+.+|+|+||+|.+|..+++.+...|.+ |++++|++
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~---Vi~~~~~~ 202 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAE---VYATAGST 202 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCE---EEEEeCCH
Confidence 4679999999999999999999999886 88999864
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.009 Score=51.92 Aligned_cols=37 Identities=22% Similarity=0.273 Sum_probs=31.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
+++++|+|+|+ |.+|+.++..|.+.|.. .|++..|+.
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~--~V~v~nR~~ 175 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAAE--RIDMANRTV 175 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCS--EEEEECSSH
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCCC--EEEEEeCCH
Confidence 45789999996 88999999999999862 399999974
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.43 E-value=0.051 Score=47.78 Aligned_cols=119 Identities=14% Similarity=0.116 Sum_probs=72.9
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
+++||.|+|| |.+|..++..|+..+. +..|.++++.+.... ....++ .+. . + ....+.+.. | +
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~-~~el~L~Di~~~~~~--g~~~dl-~~~----~----~-~~~~~~i~~-~--~ 70 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIFKDKTK--GDAIDL-SNA----L----P-FTSPKKIYS-A--E 70 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCHHHHH--HHHHHH-HTT----G----G-GSCCCEEEE-C--C
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCC-CCEEEEEeCCchHhH--HHHHHH-HHH----H----H-hcCCeEEEE-C--C
Confidence 3479999998 9999999999988864 456888888532111 111111 110 0 0 112333332 2 1
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
...++++|+||.+++.... ......++..|+.....+.+.+.+......++.+|..
T Consensus 71 ----------~~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 127 (326)
T 2zqz_A 71 ----------YSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 127 (326)
T ss_dssp ----------GGGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSS
T ss_pred ----------HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 2347899999999997532 3344567778888888898888877334456655544
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0057 Score=54.17 Aligned_cols=37 Identities=14% Similarity=0.265 Sum_probs=32.5
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.+.+|||+||+|.+|...++.+...|.+ |+++++++.
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~---Vi~~~~~~~ 195 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAK---VIAVVNRTA 195 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCE---EEEEeCCHH
Confidence 4679999999999999999999988886 888888754
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.023 Score=50.02 Aligned_cols=120 Identities=13% Similarity=-0.028 Sum_probs=74.7
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
..+||.|+|+ |.+|..++..|+..|. +..|.++++++... .....++ .+.. +- ....++. ...|+.+
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~-~~ev~L~Di~~~~~--~g~a~DL-~~~~----~~---~~~~~i~-~t~d~~~ 86 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDL-ADEVALVDVMEDKL--KGEMMDL-EHGS----LF---LHTAKIV-SGKDYSV 86 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCC-CSEEEEECSCHHHH--HHHHHHH-HHHG----GG---SCCSEEE-EESSSCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECCHHHH--HHHHHHh-hhhh----hc---ccCCeEE-EcCCHHH
Confidence 3478999998 9999999999999875 23588888854321 1111111 1110 00 0011221 1234322
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
++++|+||-+||... ......+++..|..-.+.+.+.+.+......++.+|..
T Consensus 87 -------------~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNP 140 (330)
T 3ldh_A 87 -------------SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPEL 140 (330)
T ss_dssp -------------CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred -------------hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCc
Confidence 478899999999754 34445677788988888888888877334456666654
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.012 Score=52.06 Aligned_cols=39 Identities=10% Similarity=0.108 Sum_probs=33.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG 83 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~ 83 (303)
..+.+|+|+||+|.+|...++.+...|.+ |+++++++..
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~---Vi~~~~~~~~ 181 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFR---LIAVTRNNKH 181 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCE---EEEEESSSTT
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCE---EEEEeCCHHH
Confidence 34689999999999999999999888886 8899987653
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.33 E-value=0.045 Score=47.96 Aligned_cols=117 Identities=13% Similarity=0.097 Sum_probs=69.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
+||.|+|| |.+|.+++..|+..+. +..|.++++.+.... ....++ .+. . + ....+.+.. | +
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~~~~~--g~~~dl-~~~----~----~-~~~~~~v~~-~--~-- 66 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGI-AEEFVIVDVVKDRTK--GDALDL-EDA----Q----A-FTAPKKIYS-G--E-- 66 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHHH--HHHHHH-HGG----G----G-GSCCCEEEE-C--C--
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCC-CCEEEEEeCCchHHH--HHHHHH-HHH----H----H-hcCCeEEEE-C--C--
Confidence 68999998 9999999999998865 456888888532111 111111 111 1 0 112333332 2 1
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
...++++|+||.+++.... .....+.+..|+.....+.+.+.+......++.+|..
T Consensus 67 --------~~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 123 (318)
T 1ez4_A 67 --------YSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANP 123 (318)
T ss_dssp --------GGGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred --------HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCc
Confidence 2347899999999997532 2333456677888888999888887334455655444
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.012 Score=51.63 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=32.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+++|+|+||+|.+|...++.+...|.+ |+++++++
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~---Vi~~~~~~ 175 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAK---LIGTVSSP 175 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCE---EEEEESSH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 34689999999999999999999989886 88888864
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0095 Score=52.81 Aligned_cols=37 Identities=19% Similarity=0.157 Sum_probs=32.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~ 81 (303)
..+++|+|+|++|.+|..+++.+... |.. |+++++++
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~---Vi~~~~~~ 206 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGAT---IIGVDVRE 206 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCE---EEEEESSH
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCe---EEEEcCCH
Confidence 35689999999989999999999998 886 88888864
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=96.20 E-value=0.048 Score=47.53 Aligned_cols=117 Identities=15% Similarity=0.011 Sum_probs=70.1
Q ss_pred cEEEEeCCcchhHHHHHHHHHhc--CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRS--CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~--g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
|||.|+|+ |.+|..++..|... |++ |.++++++.... .+..-+.+... .. .....+... +|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~---V~l~D~~~~~~~---~~~~~l~~~~~----~~----~~~~~i~~t--~d 63 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARE---LVLLDVVEGIPQ---GKALDMYESGP----VG----LFDTKVTGS--ND 63 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSE---EEEECSSSSHHH---HHHHHHHTTHH----HH----TCCCEEEEE--SC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCE---EEEEeCChhHHH---HHHHhHHhhhh----cc----cCCcEEEEC--CC
Confidence 57999997 99999999999885 455 999999864322 11111111100 00 011111111 11
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
+.. ++++|+||-+++.... ......++..|+.-...+.+.+.+......++.+|..
T Consensus 64 ---------~~~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP 120 (310)
T 1guz_A 64 ---------YAD-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 120 (310)
T ss_dssp ---------GGG-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSS
T ss_pred ---------HHH-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCc
Confidence 223 6789999999986432 3335667778888888888888776233455555443
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0083 Score=55.51 Aligned_cols=74 Identities=19% Similarity=0.311 Sum_probs=54.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
.|+|+|.| .|-+|+++++.|.+.|++ |+++++++. +++.+... -++.++.||.+++
T Consensus 3 ~M~iiI~G-~G~vG~~la~~L~~~~~~---v~vId~d~~------~~~~~~~~--------------~~~~~i~Gd~~~~ 58 (461)
T 4g65_A 3 AMKIIILG-AGQVGGTLAENLVGENND---ITIVDKDGD------RLRELQDK--------------YDLRVVNGHASHP 58 (461)
T ss_dssp CEEEEEEC-CSHHHHHHHHHTCSTTEE---EEEEESCHH------HHHHHHHH--------------SSCEEEESCTTCH
T ss_pred cCEEEEEC-CCHHHHHHHHHHHHCCCC---EEEEECCHH------HHHHHHHh--------------cCcEEEEEcCCCH
Confidence 47899999 599999999999999888 888888643 33332221 4678999999987
Q ss_pred CCCCCHHHHHHH-hccccEEEEcce
Q psy17679 124 GLGLSETDRATL-VKQVNIVFHGAA 147 (303)
Q Consensus 124 ~~~~~~~~~~~~-~~~~dvVi~~a~ 147 (303)
+ .+.++ .+++|++|-+.+
T Consensus 59 ~------~L~~Agi~~ad~~ia~t~ 77 (461)
T 4g65_A 59 D------VLHEAGAQDADMLVAVTN 77 (461)
T ss_dssp H------HHHHHTTTTCSEEEECCS
T ss_pred H------HHHhcCCCcCCEEEEEcC
Confidence 6 45555 358999885543
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=96.19 E-value=0.015 Score=51.16 Aligned_cols=37 Identities=14% Similarity=0.167 Sum_probs=32.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+.+|+|+||+|.+|...++.+...|.+ |++++|++
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~---Vi~~~~~~ 183 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAH---TIAVASTD 183 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCE---EEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 35689999999999999999999988876 88888863
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0073 Score=52.41 Aligned_cols=38 Identities=8% Similarity=0.151 Sum_probs=32.7
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG 83 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~ 83 (303)
.+.+|+|+|++|.+|...++.+...|.+ |++++|++..
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~---Vi~~~~~~~~ 162 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLR---VLAAASRPEK 162 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCE---EEEEESSGGG
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH
Confidence 4679999999999999999999888875 8899987543
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=96.15 E-value=0.061 Score=46.93 Aligned_cols=117 Identities=13% Similarity=0.056 Sum_probs=73.2
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|+|+ |.+|.+++..|+..+. +..|.++++++.... ....++ .+ ..+ ....+.+.. + +
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~~k~~--g~a~dl-~~----~~~-----~~~~~~v~~-~--~-- 61 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGV-AREVVLVDLDRKLAQ--AHAEDI-LH----ATP-----FAHPVWVWA-G--S-- 61 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHHHHH--HHHHHH-HT----TGG-----GSCCCEEEE-C--C--
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhHHH--HHHHHH-HH----hHh-----hcCCeEEEE-C--C--
Confidence 58999997 9999999999988853 456889988632111 111111 11 000 012333332 2 1
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
...++++|+||.+++... .......++..|+.-...+.+.+.+......++.+|..
T Consensus 62 --------~~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 118 (310)
T 2xxj_A 62 --------YGDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNP 118 (310)
T ss_dssp --------GGGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred --------HHHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence 234689999999999754 23345567778888888898888877334456655544
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0097 Score=53.19 Aligned_cols=35 Identities=11% Similarity=0.209 Sum_probs=31.1
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
++++|+|+|+ |.+|..+++.+...|.. |++++|++
T Consensus 180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~---Vi~~~~~~ 214 (366)
T 2cdc_A 180 NCRKVLVVGT-GPIGVLFTLLFRTYGLE---VWMANRRE 214 (366)
T ss_dssp TTCEEEEESC-HHHHHHHHHHHHHHTCE---EEEEESSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCE---EEEEeCCc
Confidence 3789999999 99999999999988875 88999875
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=96.13 E-value=0.009 Score=53.35 Aligned_cols=37 Identities=14% Similarity=0.164 Sum_probs=32.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+.+|+|+||+|.+|..+++.+...|.. |++++|++
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~---Vi~~~~~~ 198 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCH---VIGTCSSD 198 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCE---EEEEESSH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCE---EEEEECCH
Confidence 34679999999999999999999888876 88988863
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=96.10 E-value=0.026 Score=52.02 Aligned_cols=101 Identities=9% Similarity=0.143 Sum_probs=64.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcC-CCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSC-PHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g-~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
+++|+|.| .|.+|+.++..|.++. ..+..|++.+.........+. .++.+...+++.
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~---------------------~g~~~~~~~Vda 70 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQ---------------------YGVSFKLQQITP 70 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHH---------------------HTCEEEECCCCT
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhh---------------------cCCceeEEeccc
Confidence 35799999 7999999999999873 333468887765543332221 245666666665
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
... .+.+..++++.|+|||.+-. .. ...++++|.+. ++ .|++++
T Consensus 71 dnv---~~~l~aLl~~~DvVIN~s~~---~~------------~l~Im~aclea-Gv---~YlDTa 114 (480)
T 2ph5_A 71 QNY---LEVIGSTLEENDFLIDVSIG---IS------------SLALIILCNQK-GA---LYINAA 114 (480)
T ss_dssp TTH---HHHTGGGCCTTCEEEECCSS---SC------------HHHHHHHHHHH-TC---EEEESS
T ss_pred hhH---HHHHHHHhcCCCEEEECCcc---cc------------CHHHHHHHHHc-CC---CEEECC
Confidence 430 01233455566999985432 11 14678999998 55 666776
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=0.067 Score=46.78 Aligned_cols=120 Identities=13% Similarity=0.036 Sum_probs=70.1
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
..+||.|+|+ |.+|..++..|+..|. +..|.++++++.. .+.. ...+.+..+ .....+.+.. | +
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~-~~ev~l~Di~~~~---~~~~----~~dl~~~~~----~~~~~~~i~~-~--~ 68 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANESK---AIGD----AMDFNHGKV----FAPKPVDIWH-G--D 68 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHH---HHHH----HHHHHHHTT----SSSSCCEEEE-C--C
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEeCCcch---HHHH----HhhHHHHhh----hcCCCeEEEc-C--c
Confidence 3478999998 9999999999988864 3459999986421 1111 011111111 1111333332 1 1
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
...++++|+||.+++.... .....+.+..|..-...+.+.+.+......++.+|-.
T Consensus 69 ----------~~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNP 125 (316)
T 1ldn_A 69 ----------YDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNP 125 (316)
T ss_dssp ----------GGGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSS
T ss_pred ----------HHHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 1346789999999987542 2223345566777778888887776222344444443
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=96.08 E-value=0.069 Score=46.84 Aligned_cols=119 Identities=12% Similarity=0.029 Sum_probs=69.4
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
++||.|+|| |.+|..++..|...|+ + .|.++++++.... .....+.+.... +. ...++... .|
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~-~-~v~L~Di~~~~l~---~~~~~l~~~~~~-~~-----~~~~i~~t-~d---- 66 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNL-G-DVVLFDIVKNMPH---GKALDTSHTNVM-AY-----SNCKVSGS-NT---- 66 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-C-EEEEECSSSSHHH---HHHHHHHTHHHH-HT-----CCCCEEEE-CC----
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEeCCHHHHH---HHHHHHHhhhhh-cC-----CCcEEEEC-CC----
Confidence 468999997 9999999999999877 1 2888888754322 111111111110 00 01122211 22
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccc-ccc-----HHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRF-DEH-----IKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~-----~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
+ ..++++|+||.+++.... ... ...+...|+.-.+.+.+.+.+......+|.+|..
T Consensus 67 --------~-~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 128 (322)
T 1t2d_A 67 --------Y-DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNP 128 (322)
T ss_dssp --------G-GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSS
T ss_pred --------H-HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 3 456889999999986432 211 3445566777777787777766222344555444
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=96.07 E-value=0.012 Score=50.31 Aligned_cols=36 Identities=25% Similarity=0.299 Sum_probs=31.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.++++++|+|+ |.+|+.++..|++.|.+ |++..|+.
T Consensus 117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~---v~v~~R~~ 152 (272)
T 1p77_A 117 RPNQHVLILGA-GGATKGVLLPLLQAQQN---IVLANRTF 152 (272)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTTCE---EEEEESSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCE---EEEEECCH
Confidence 45689999997 88999999999999865 99999974
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.08 Score=46.56 Aligned_cols=117 Identities=13% Similarity=0.107 Sum_probs=69.1
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCC-CccEEEEEeCCCCcccHH-HHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCP-HLKHIYLLVRPKKGKDIQ-ERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~-~v~~V~~~~R~~~~~~~~-~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
++||.|+|| |.+|..++..|...|+ + |.+.++++...... ..+.+... . +. ...++... .|
T Consensus 14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~---V~L~Di~~~~l~~~~~~l~~~~~----~-~~-----~~~~i~~t-~d-- 76 (328)
T 2hjr_A 14 RKKISIIGA-GQIGSTIALLLGQKDLGD---VYMFDIIEGVPQGKALDLNHCMA----L-IG-----SPAKIFGE-NN-- 76 (328)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCE---EEEECSSTTHHHHHHHHHHHHHH----H-HT-----CCCCEEEE-SC--
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCe---EEEEECCHHHHHHHHHHHHhHhh----c-cC-----CCCEEEEC-CC--
Confidence 368999997 9999999999999887 4 99999976433211 11111111 0 00 01222221 22
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
+ ..++++|+||-+++... ......++...|..-...+.+.+.+......++.+|..
T Consensus 77 ----------~-~al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP 133 (328)
T 2hjr_A 77 ----------Y-EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNP 133 (328)
T ss_dssp ----------G-GGGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred ----------H-HHHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 3 45678999999997643 22222344556777777777777765222344555544
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.0073 Score=56.81 Aligned_cols=36 Identities=19% Similarity=0.247 Sum_probs=28.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
+++++++|||| |++|++++..|.+.|.+ |+++.|+.
T Consensus 362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~---V~i~~R~~ 397 (523)
T 2o7s_A 362 LASKTVVVIGA-GGAGKALAYGAKEKGAK---VVIANRTY 397 (523)
T ss_dssp ----CEEEECC-SHHHHHHHHHHHHHCC----CEEEESSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCE---EEEEECCH
Confidence 46689999998 79999999999999986 88888863
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=96.03 E-value=0.003 Score=56.52 Aligned_cols=77 Identities=14% Similarity=0.255 Sum_probs=51.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
.++++|+|+|+ |.+|+.++..|...|.+ |++++|++.. .+.+.++.. ..+..+. .
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~---V~v~dr~~~r---~~~~~~~~~---------------~~~~~~~---~ 219 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQ---VQIFDINVER---LSYLETLFG---------------SRVELLY---S 219 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHG---------------GGSEEEE---C
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCE---EEEEeCCHHH---HHHHHHhhC---------------ceeEeee---C
Confidence 45689999998 99999999999999875 9999997431 122222211 1221211 1
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceec
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATV 149 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~ 149 (303)
+ ..++.+.+.++|+||++++..
T Consensus 220 ~------~~~~~~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 220 N------SAEIETAVAEADLLIGAVLVP 241 (361)
T ss_dssp C------HHHHHHHHHTCSEEEECCCCT
T ss_pred C------HHHHHHHHcCCCEEEECCCcC
Confidence 1 124566667999999999864
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.015 Score=49.91 Aligned_cols=36 Identities=14% Similarity=0.246 Sum_probs=31.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++++++|.|+++.+|+.++..|+..|.. |+++.|
T Consensus 157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAt---Vtv~h~ 192 (285)
T 3p2o_A 157 DLEGKDAVIIGASNIVGRPMATMLLNAGAT---VSVCHI 192 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeC
Confidence 478899999999999999999999999876 777665
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=96.00 E-value=0.0081 Score=49.53 Aligned_cols=35 Identities=14% Similarity=0.225 Sum_probs=29.7
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
++|+|.|+| +|.+|..++..|.+.|++ |++.+|+.
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~---V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSGFK---VVVGSRNP 61 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTTCC---EEEEESSH
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 457899999 899999999999999987 88888863
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=95.92 E-value=0.0049 Score=52.91 Aligned_cols=37 Identities=22% Similarity=0.285 Sum_probs=27.3
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~ 81 (303)
+++||.|+|++|.+|+.+++.+.+. |+++ |-+++|++
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~el--va~~d~~~ 41 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQL--GAALEREG 41 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEEC--CCEECCTT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEE--EEEEecCc
Confidence 4579999999999999999998754 4442 33455543
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=95.91 E-value=0.031 Score=49.97 Aligned_cols=37 Identities=24% Similarity=0.357 Sum_probs=29.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
+++|.|.||||++|..|++.|.+.++....+..++..
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~ 38 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA 38 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECT
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcc
Confidence 4689999999999999999888876655556665543
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.067 Score=46.48 Aligned_cols=117 Identities=15% Similarity=0.149 Sum_probs=64.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|+|+ |.+|..++..|...|+ +..|.++++++. +++.... .+....+ ......+...|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~-~~eV~L~D~~~~------~~~~~~~-----~l~~~~~-~~~~~~i~~~~----- 61 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGS-CSELVLVDRDED------RAQAEAE-----DIAHAAP-VSHGTRVWHGG----- 61 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHH------HHHHHHH-----HHTTSCC-TTSCCEEEEEC-----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCHH------HHHHHHH-----hhhhhhh-hcCCeEEEECC-----
Confidence 58999997 9999999999999887 234999988632 1111100 1111110 01122222211
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
. ..++++|+||.+++... ......+.+..|......+++.+.+......++.+|..
T Consensus 62 -------~-~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP 118 (304)
T 2v6b_A 62 -------H-SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNP 118 (304)
T ss_dssp -------G-GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSS
T ss_pred -------H-HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCc
Confidence 1 34678999999998643 22333456667888888888888776222344444443
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=95.84 E-value=0.11 Score=45.27 Aligned_cols=118 Identities=11% Similarity=0.054 Sum_probs=67.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCC-CccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCP-HLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~-~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+||.|.|+ |.+|..++..|...|+ + |.+.++++...... ..++...... . ....++... .|
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~---V~l~D~~~~~~~~~--~~~l~~~~~~--~-----~~~~~i~~t-~d--- 66 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNLAD---VVLFDIAEGIPQGK--ALDITHSMVM--F-----GSTSKVIGT-DD--- 66 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCE---EEEECSSSSHHHHH--HHHHHHHHHH--H-----TCCCCEEEE-SC---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCce---EEEEeCCchHHHHH--HHHHHhhhhh--c-----CCCcEEEEC-CC---
Confidence 468999997 9999999999999987 5 99999976432211 1111110000 0 001122211 12
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
+ ..++++|+||-+++.... .....+....|......+++.+.+......++.+|..
T Consensus 67 ---------~-~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp 123 (317)
T 2ewd_A 67 ---------Y-ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNP 123 (317)
T ss_dssp ---------G-GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred ---------H-HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCCh
Confidence 2 345789999999986432 2223334445666667777777665233345555554
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=95.83 E-value=0.021 Score=50.93 Aligned_cols=92 Identities=18% Similarity=0.151 Sum_probs=55.6
Q ss_pred ccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc---c----------HHHHHHHHHHhHHHhhhhcc
Q psy17679 39 QEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK---D----------IQERLDAIFEDRLFWRLRAE 105 (303)
Q Consensus 39 ~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~---~----------~~~~l~~l~~~~~~~~~~~~ 105 (303)
+..++.++|+|.|+ |.+|..+++.|...|.. ++++++++.-.. . ...+.+. +..++...
T Consensus 113 q~~L~~~~VlvvG~-GglGs~va~~La~aGvg--~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~-----~~~~l~~~ 184 (353)
T 3h5n_A 113 QDKLKNAKVVILGC-GGIGNHVSVILATSGIG--EIILIDNDQIENTNLTRQVLFSEDDVGKNKTEV-----IKRELLKR 184 (353)
T ss_dssp HHHHHTCEEEEECC-SHHHHHHHHHHHHHTCS--EEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHH-----HHHHHHHH
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHhCCCC--eEEEECCCcCcccccccccCCChHHCCChHHHH-----HHHHHHHH
Confidence 44566789999995 88999999999999754 588888753100 0 0001111 11112222
Q ss_pred CcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcce
Q psy17679 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAA 147 (303)
Q Consensus 106 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~ 147 (303)
+| ..+++.+..++.+.. ++.. ++++|+||.+..
T Consensus 185 np--~v~v~~~~~~i~~~~------~~~~-~~~~DlVvd~~D 217 (353)
T 3h5n_A 185 NS--EISVSEIALNINDYT------DLHK-VPEADIWVVSAD 217 (353)
T ss_dssp CT--TSEEEEEECCCCSGG------GGGG-SCCCSEEEECCC
T ss_pred CC--CCeEEEeecccCchh------hhhH-hccCCEEEEecC
Confidence 22 135666666666543 2444 789999998753
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=95.83 E-value=0.017 Score=50.96 Aligned_cols=71 Identities=15% Similarity=0.107 Sum_probs=51.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
.++++|.|+ |.+|+.+++.|.+.|+ |.++++++.. ++ +.. .++.++.||.+++
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~----v~vid~~~~~------~~-~~~---------------~~~~~i~gd~~~~ 167 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV----FVLAEDENVR------KK-VLR---------------SGANFVHGDPTRV 167 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE----EEEESCGGGH------HH-HHH---------------TTCEEEESCTTSH
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc----EEEEeCChhh------hh-HHh---------------CCcEEEEeCCCCH
Confidence 468999995 9999999999998864 5566765432 11 111 5788999999987
Q ss_pred CCCCCHHHHHHH-hccccEEEEcce
Q psy17679 124 GLGLSETDRATL-VKQVNIVFHGAA 147 (303)
Q Consensus 124 ~~~~~~~~~~~~-~~~~dvVi~~a~ 147 (303)
+ .+.++ ++++|.|+-+.+
T Consensus 168 ~------~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 168 S------DLEKANVRGARAVIVDLE 186 (336)
T ss_dssp H------HHHHTCSTTEEEEEECCS
T ss_pred H------HHHhcChhhccEEEEcCC
Confidence 6 56666 678999887654
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.81 E-value=0.051 Score=47.32 Aligned_cols=117 Identities=15% Similarity=0.146 Sum_probs=65.9
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|.| +|.+|..++..|...|. ...|.+++|++.. .+.+..-+.+.. .. ....+.....|
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~-~~~V~l~d~~~~~---~~~~~~~l~~~~----~~----~~~~~~~~~~d----- 63 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGV-ADDYVFIDANEAK---VKADQIDFQDAM----AN----LEAHGNIVIND----- 63 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTC-CSEEEEECSSHHH---HHHHHHHHHHHG----GG----SSSCCEEEESC-----
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC-CCEEEEEcCCHHH---HHHHHHHHHhhh----hh----cCCCeEEEeCC-----
Confidence 6899999 79999999999999983 2349999986421 112211111110 00 00123332222
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-----ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-----FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVST 187 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-----~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS 187 (303)
+ ..++++|+||-+++... .......++..|+.-...+++.+.+......++.+|.
T Consensus 64 -------~-~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tN 123 (309)
T 1hyh_A 64 -------W-AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISN 123 (309)
T ss_dssp -------G-GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred -------H-HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcC
Confidence 2 34578899999998644 2222234455677777778877776522234444433
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.083 Score=45.62 Aligned_cols=37 Identities=11% Similarity=0.066 Sum_probs=32.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK 84 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~ 84 (303)
.++|.|.| .|.+|..++..|.+.|++ |++.+|++...
T Consensus 15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~---V~~~dr~~~~~ 51 (296)
T 3qha_A 15 QLKLGYIG-LGNMGAPMATRMTEWPGG---VTVYDIRIEAM 51 (296)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHTTSTTC---EEEECSSTTTS
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCe---EEEEeCCHHHH
Confidence 46899998 799999999999999998 89999987643
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.024 Score=48.57 Aligned_cols=36 Identities=19% Similarity=0.228 Sum_probs=31.4
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++++++|.|++|.+|+.++..|+..|.. |+++.|
T Consensus 158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~hs 193 (285)
T 3l07_A 158 KTEGAYAVVVGASNVVGKPVSQLLLNAKAT---VTTCHR 193 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECT
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCe---EEEEeC
Confidence 468899999999999999999999999876 776654
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=95.69 E-value=0.022 Score=49.11 Aligned_cols=35 Identities=26% Similarity=0.369 Sum_probs=30.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
+++++++|+|+ |.+|++++..|++.| + |++..|+.
T Consensus 126 l~~k~vlV~Ga-GgiG~aia~~L~~~G-~---V~v~~r~~ 160 (287)
T 1nvt_A 126 VKDKNIVIYGA-GGAARAVAFELAKDN-N---IIIANRTV 160 (287)
T ss_dssp CCSCEEEEECC-SHHHHHHHHHHTSSS-E---EEEECSSH
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHCC-C---EEEEECCH
Confidence 46789999997 499999999999998 6 88888864
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.11 Score=45.29 Aligned_cols=116 Identities=12% Similarity=0.076 Sum_probs=72.0
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEE-ecCCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVA-GDCSLPG 124 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~-~Dl~d~~ 124 (303)
||.|+|| |.+|..++..|+..|. ..|.++++++..... ...++...... + .....+.. .|
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l--~el~L~Di~~~~~~g--~~~dl~~~~~~--~-------~~~~~i~~t~d----- 61 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGY--DDLLLIARTPGKPQG--EALDLAHAAAE--L-------GVDIRISGSNS----- 61 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTC--SCEEEECSSTTHHHH--HHHHHHHHHHH--H-------TCCCCEEEESC-----
T ss_pred CEEEECc-CHHHHHHHHHHHhCCC--CEEEEEcCChhhHHH--HHHHHHHhhhh--c-------CCCeEEEECCC-----
Confidence 5889998 9999999999988866 348899987543221 11222111000 0 01222222 22
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
+ ..++++|+||-+++.... ..........|+.-...+++.+.+......+|.+|..
T Consensus 62 -------~-~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 118 (308)
T 2d4a_B 62 -------Y-EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNP 118 (308)
T ss_dssp -------G-GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred -------H-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 2 356889999999997542 3344566777888888888888876233456666554
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.027 Score=48.64 Aligned_cols=37 Identities=14% Similarity=0.235 Sum_probs=32.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
.+++++++|.|++|.+|+.++..|+..|.. |+++.|.
T Consensus 162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~~~~ 198 (300)
T 4a26_A 162 EMAGKRAVVLGRSNIVGAPVAALLMKENAT---VTIVHSG 198 (300)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECTT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCC
Confidence 478899999999999999999999999887 8777663
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=95.63 E-value=0.019 Score=50.61 Aligned_cols=36 Identities=11% Similarity=0.011 Sum_probs=30.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+++|+|+|+ |.+|..+++.+...|.. |++++|++
T Consensus 163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~---Vi~~~~~~ 198 (339)
T 1rjw_A 163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLN---VVAVDIGD 198 (339)
T ss_dssp CTTCEEEEECC-STTHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCE---EEEEeCCH
Confidence 35689999999 77999999999888875 88988864
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=95.61 E-value=0.034 Score=49.24 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=31.1
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
++|+|+||+|.+|...++.+...|.+ |+++++++.
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~---Vi~~~~~~~ 200 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFR---PIVTVRRDE 200 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCE---EEEEESCGG
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCHH
Confidence 78999999999999999999988876 889888754
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=95.60 E-value=0.026 Score=48.41 Aligned_cols=36 Identities=14% Similarity=0.185 Sum_probs=31.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++++++|.|++|.+|+.++..|+..|.. |+++.+
T Consensus 158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAt---Vtv~hs 193 (286)
T 4a5o_A 158 DLYGMDAVVVGASNIVGRPMALELLLGGCT---VTVTHR 193 (286)
T ss_dssp CCTTCEEEEECTTSTTHHHHHHHHHHTTCE---EEEECT
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCe---EEEEeC
Confidence 468899999999999999999999999876 777654
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=95.53 E-value=0.05 Score=47.62 Aligned_cols=39 Identities=21% Similarity=0.218 Sum_probs=34.1
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..+.+|+|.|.| .|-||+.+++.|...|++ |++.+|++.
T Consensus 135 ~~l~g~tvGIiG-~G~IG~~vA~~l~~~G~~---V~~~dr~~~ 173 (315)
T 3pp8_A 135 YTREEFSVGIMG-AGVLGAKVAESLQAWGFP---LRCWSRSRK 173 (315)
T ss_dssp CCSTTCCEEEEC-CSHHHHHHHHHHHTTTCC---EEEEESSCC
T ss_pred CCcCCCEEEEEe-eCHHHHHHHHHHHHCCCE---EEEEcCCch
Confidence 356789999998 799999999999999988 889988754
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=95.49 E-value=0.025 Score=48.23 Aligned_cols=35 Identities=14% Similarity=0.269 Sum_probs=31.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
+.+++++|.|+++.+|+.++..|+..|.. |+++.|
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAt---Vtv~~~ 182 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYT---VSVCHS 182 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECT
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCe---EEEEeC
Confidence 78899999999999999999999999887 777655
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=95.48 E-value=0.07 Score=47.09 Aligned_cols=34 Identities=26% Similarity=0.512 Sum_probs=25.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
|+||.|.||||++|..+++.|.+. .++ .+..+.+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~-p~~-el~~l~s 37 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRH-PHM-NITALTV 37 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTE-EEEEEEE
T ss_pred ceEEEEECCCChHHHHHHHHHHhC-CCC-cEEEEEe
Confidence 378999999999999999998875 333 2544433
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.026 Score=49.87 Aligned_cols=34 Identities=18% Similarity=0.412 Sum_probs=29.3
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
.+.+|||+||+|.+|...++.+...|.. |+++ ++
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~---Vi~~-~~ 183 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGAR---VFAT-AR 183 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEE-EC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCE---EEEE-eC
Confidence 4679999999999999999999988886 7777 44
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=95.46 E-value=0.034 Score=48.20 Aligned_cols=72 Identities=15% Similarity=0.202 Sum_probs=50.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+.+++|+|.| .|.+|+.+++.|...|.+ |++.+|+.. +.+.+.. .++..+. .
T Consensus 154 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~---V~~~d~~~~------~~~~~~~---------------~g~~~~~--~ 206 (300)
T 2rir_A 154 TIHGSQVAVLG-LGRTGMTIARTFAALGAN---VKVGARSSA------HLARITE---------------MGLVPFH--T 206 (300)
T ss_dssp CSTTSEEEEEC-CSHHHHHHHHHHHHTTCE---EEEEESSHH------HHHHHHH---------------TTCEEEE--G
T ss_pred CCCCCEEEEEc-ccHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHH---------------CCCeEEc--h
Confidence 36779999999 599999999999999875 889998642 1111111 1222221 1
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEccee
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAAT 148 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~ 148 (303)
. .+.++++++|+|+.+...
T Consensus 207 ---~------~l~~~l~~aDvVi~~~p~ 225 (300)
T 2rir_A 207 ---D------ELKEHVKDIDICINTIPS 225 (300)
T ss_dssp ---G------GHHHHSTTCSEEEECCSS
T ss_pred ---h------hHHHHhhCCCEEEECCCh
Confidence 1 467788899999998875
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=95.43 E-value=0.068 Score=47.79 Aligned_cols=37 Identities=8% Similarity=0.186 Sum_probs=27.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRP 80 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~ 80 (303)
|+||.|.||+|++|+.+++.|++. ++.+..|+.+...
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~ 38 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS 38 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC
Confidence 368999999999999999955554 3445567676654
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=95.40 E-value=0.052 Score=46.45 Aligned_cols=37 Identities=19% Similarity=0.361 Sum_probs=31.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.++++++|+|+ |.+|+.++..|.+.|.. .|++..|+.
T Consensus 118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~--~v~i~~R~~ 154 (272)
T 3pwz_A 118 LRNRRVLLLGA-GGAVRGALLPFLQAGPS--ELVIANRDM 154 (272)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTCCS--EEEEECSCH
T ss_pred ccCCEEEEECc-cHHHHHHHHHHHHcCCC--EEEEEeCCH
Confidence 46789999996 89999999999999852 488999974
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=95.37 E-value=0.013 Score=52.73 Aligned_cols=78 Identities=15% Similarity=0.124 Sum_probs=51.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+.+++|+|+|+ |.+|..+++.+...|.+ |++.+|++.. .+.+++.++ ..+. .+.
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~---V~~~d~~~~~---l~~~~~~~g---------------~~~~---~~~ 219 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGMGAT---VTVLDINIDK---LRQLDAEFC---------------GRIH---TRY 219 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHTT---------------TSSE---EEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCE---EEEEeCCHHH---HHHHHHhcC---------------CeeE---ecc
Confidence 367899999997 99999999999999875 8899986421 111111111 1211 122
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceec
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATV 149 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~ 149 (303)
.+. ..+.+++.++|+||.+++..
T Consensus 220 ~~~------~~l~~~l~~aDvVi~~~~~p 242 (377)
T 2vhw_A 220 SSA------YELEGAVKRADLVIGAVLVP 242 (377)
T ss_dssp CCH------HHHHHHHHHCSEEEECCCCT
T ss_pred CCH------HHHHHHHcCCCEEEECCCcC
Confidence 221 24667778999999988754
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.34 E-value=0.25 Score=43.15 Aligned_cols=117 Identities=15% Similarity=0.036 Sum_probs=69.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|.|+ |.+|..++..|...|+ ...|.+++|++.. .+.+...+.+.. .. .....+.. ++.
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~-~~~V~l~D~~~~~---~~~~~~~l~~~~----~~-----~~~~~i~~---~d~- 62 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDKKR---AEGDALDLIHGT----PF-----TRRANIYA---GDY- 62 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHH---HHHHHHHHHHHG----GG-----SCCCEEEE---CCG-
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCChHH---HHHHHHHHHhhh----hh-----cCCcEEEe---CCH-
Confidence 57999997 9999999999999987 2349999986421 112111111111 00 01122221 121
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
..++++|+||-+++.... .....++...|+.....+++.+.+......+|.+|..
T Consensus 63 ---------~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp 118 (319)
T 1a5z_A 63 ---------ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNP 118 (319)
T ss_dssp ---------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred ---------HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCc
Confidence 235789999999986542 2234456677887788888888775222345555443
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=95.31 E-value=0.062 Score=46.19 Aligned_cols=37 Identities=30% Similarity=0.398 Sum_probs=31.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.++++++|+|+ |.+|+.++..|.+.|.. .|++..|+.
T Consensus 124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~--~v~v~~R~~ 160 (281)
T 3o8q_A 124 LKGATILLIGA-GGAARGVLKPLLDQQPA--SITVTNRTF 160 (281)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTCCS--EEEEEESSH
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHhcCCC--eEEEEECCH
Confidence 46789999996 88999999999999852 399999974
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} | Back alignment and structure |
|---|
Probab=95.30 E-value=0.074 Score=46.67 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=33.7
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+.+++|.|.| .|-||+.+++.|...|.+ |++.+|+.
T Consensus 136 ~~l~g~tvGIIG-lG~IG~~vA~~l~~~G~~---V~~~dr~~ 173 (324)
T 3hg7_A 136 QGLKGRTLLILG-TGSIGQHIAHTGKHFGMK---VLGVSRSG 173 (324)
T ss_dssp CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSC
T ss_pred cccccceEEEEE-ECHHHHHHHHHHHhCCCE---EEEEcCCh
Confidence 457889999998 799999999999999987 88888875
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=95.29 E-value=0.12 Score=45.01 Aligned_cols=108 Identities=15% Similarity=0.112 Sum_probs=63.7
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|||.|.|+ |.+|..++..|...|+ +..|++++|++..... ..+ + +.+... + .....+... .+
T Consensus 6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~-~~~V~l~d~~~~~~~~-~~~-~-~~~~~~--~-------~~~~~v~~~--~~ 69 (319)
T 1lld_A 6 KPTKLAVIGA-GAVGSTLAFAAAQRGI-AREIVLEDIAKERVEA-EVL-D-MQHGSS--F-------YPTVSIDGS--DD 69 (319)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHHHHHH-HHH-H-HHHTGG--G-------STTCEEEEE--SC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhHHHH-HHH-H-HHhhhh--h-------cCCeEEEeC--CC
Confidence 3478999997 9999999999999987 1238899886421110 001 0 111110 0 011222211 11
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhc
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREM 176 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~ 176 (303)
. ..++++|+||-+++.... .....+.+..|......+++.+.+.
T Consensus 70 ---------~-~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~ 114 (319)
T 1lld_A 70 ---------P-EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV 114 (319)
T ss_dssp ---------G-GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------H-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 235688999999976432 2344566677877777777777665
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=95.26 E-value=0.044 Score=47.32 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=32.1
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+.+++|+|.| .|.+|+.+++.|...|.+ |++.+|+.
T Consensus 152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~---V~~~dr~~ 188 (293)
T 3d4o_A 152 TIHGANVAVLG-LGRVGMSVARKFAALGAK---VKVGARES 188 (293)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEEESSH
T ss_pred CCCCCEEEEEe-eCHHHHHHHHHHHhCCCE---EEEEECCH
Confidence 35779999999 699999999999999875 88999864
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.035 Score=49.10 Aligned_cols=35 Identities=17% Similarity=0.237 Sum_probs=30.7
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCC-CccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCP-HLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~-~v~~V~~~~R~~ 81 (303)
.+.+|+|+|+ |.+|...++.+...|. . |++++|++
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~---Vi~~~~~~ 202 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYP---VIVSEPSD 202 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCS---EEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCE---EEEECCCH
Confidence 5678999999 9999999999988887 6 88888863
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.018 Score=49.66 Aligned_cols=37 Identities=19% Similarity=0.378 Sum_probs=31.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.++++++|+|+ |..|+.++..|.+.|.. .|+++.|+.
T Consensus 120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~--~v~v~nRt~ 156 (282)
T 3fbt_A 120 IKNNICVVLGS-GGAARAVLQYLKDNFAK--DIYVVTRNP 156 (282)
T ss_dssp CTTSEEEEECS-STTHHHHHHHHHHTTCS--EEEEEESCH
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCC--EEEEEeCCH
Confidence 46789999995 88999999999999762 499999974
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=95.22 E-value=0.041 Score=46.58 Aligned_cols=35 Identities=20% Similarity=0.411 Sum_probs=29.7
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
++ +++|.|+ |..|++++..|++.|.. +|++..|+.
T Consensus 108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~--~I~v~nR~~ 142 (253)
T 3u62_A 108 KE-PVVVVGA-GGAARAVIYALLQMGVK--DIWVVNRTI 142 (253)
T ss_dssp CS-SEEEECC-SHHHHHHHHHHHHTTCC--CEEEEESCH
T ss_pred CC-eEEEECc-HHHHHHHHHHHHHcCCC--EEEEEeCCH
Confidence 55 7999995 99999999999999872 399999974
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.21 E-value=0.064 Score=47.93 Aligned_cols=34 Identities=15% Similarity=0.298 Sum_probs=29.0
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+.+|+|+||+|.+|...++.+...|.. |++.++
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~---Vi~~~~ 216 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAH---VTAVCS 216 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCE---EEEEeC
Confidence 4679999999999999999988888875 777764
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=95.19 E-value=0.026 Score=51.52 Aligned_cols=71 Identities=10% Similarity=0.012 Sum_probs=50.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+.+++|+|.| .|.+|+.++..+.+.|++ |++++..+... ...+ . -.++..|+
T Consensus 32 ~~~~~~IlIlG-~G~lg~~~~~aa~~lG~~---v~v~d~~~~~p--~~~~--------------------a-d~~~~~~~ 84 (419)
T 4e4t_A 32 ILPGAWLGMVG-GGQLGRMFCFAAQSMGYR---VAVLDPDPASP--AGAV--------------------A-DRHLRAAY 84 (419)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSCTTCH--HHHH--------------------S-SEEECCCT
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCE---EEEECCCCcCc--hhhh--------------------C-CEEEECCc
Confidence 56788999998 589999999999999997 77777554311 1111 1 12456777
Q ss_pred CCCCCCCCHHHHHHHhccccEEEE
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFH 144 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~ 144 (303)
.|.+ .+..+.+++|+|+.
T Consensus 85 ~d~~------~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 85 DDEA------ALAELAGLCEAVST 102 (419)
T ss_dssp TCHH------HHHHHHHHCSEEEE
T ss_pred CCHH------HHHHHHhcCCEEEE
Confidence 7655 67777789998883
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=95.17 E-value=0.028 Score=43.80 Aligned_cols=76 Identities=13% Similarity=0.172 Sum_probs=45.3
Q ss_pred cchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHH-HHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCCCCHHH
Q psy17679 53 TGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQ-ERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLGLSETD 131 (303)
Q Consensus 53 tG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~-~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~ 131 (303)
+|.++...++.|.+.|.. |.+..|+....... +..+.+.. ...++..+.+|++++. .++
T Consensus 25 s~~p~~a~a~~La~~Ga~---vvi~~r~~~e~~~~~~~~~~~~~-------------~G~~~~~i~~Dv~~~~----~~~ 84 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVD---VVINLMPDSSKDAHPDEGKLVTQ-------------AGMDYVYIPVDWQNPK----VED 84 (157)
T ss_dssp EBCCCHHHHHHHHHTTCC---EEEECSCTTSTTSCTTHHHHHHH-------------TTCEEEECCCCTTSCC----HHH
T ss_pred cCCCCHHHHHHHHHcCCC---EEEECCCcccccccccHHHHHHH-------------cCCeEEEecCCCCCCC----HHH
Confidence 357899999999999998 66666754332110 00111111 0135566788988872 124
Q ss_pred HHHHhc------cccEEEEccee
Q psy17679 132 RATLVK------QVNIVFHGAAT 148 (303)
Q Consensus 132 ~~~~~~------~~dvVi~~a~~ 148 (303)
+..+++ +-|++|||||.
T Consensus 85 v~~~~~~i~~~~G~dVLVnnAgg 107 (157)
T 3gxh_A 85 VEAFFAAMDQHKGKDVLVHCLAN 107 (157)
T ss_dssp HHHHHHHHHHTTTSCEEEECSBS
T ss_pred HHHHHHHHHhcCCCCEEEECCCC
Confidence 444432 22999999995
|
| >1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=95.15 E-value=0.042 Score=48.77 Aligned_cols=35 Identities=26% Similarity=0.337 Sum_probs=27.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+.||.|.||||++|..+++.|.+. .. ..|..+..
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~h-P~-~el~~l~S 46 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNH-PE-AKITYLSS 46 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHC-TT-EEEEEEEC
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcC-CC-cEEEEEeC
Confidence 4578999999999999999999987 33 34555543
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=95.15 E-value=0.14 Score=47.05 Aligned_cols=33 Identities=12% Similarity=0.219 Sum_probs=29.9
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|+|.|.| +|++|..++..|.+.|++ |++.+|++
T Consensus 3 mkI~VIG-~G~vG~~lA~~La~~G~~---V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVG-IGYVGLVSATCFAELGAN---VRCIDTDR 35 (450)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CEEEEEC-cCHHHHHHHHHHHhcCCE---EEEEECCH
Confidence 6899998 699999999999999987 99999974
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=95.14 E-value=0.048 Score=48.48 Aligned_cols=37 Identities=16% Similarity=0.158 Sum_probs=31.7
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG 83 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~ 83 (303)
.+.+|||+|+ |.+|...++.+...|.. |+++++++..
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~---Vi~~~~~~~~ 215 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAE---TYVISRSSRK 215 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCE---EEEEESSSTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCE---EEEEcCCHHH
Confidence 4689999999 99999999988888875 8999987653
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=95.13 E-value=0.056 Score=49.01 Aligned_cols=37 Identities=32% Similarity=0.493 Sum_probs=31.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+++|+|.|+ |.+|..+++.|...|.. .|++.+|+.
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~--~V~v~~r~~ 201 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVR--AVLVANRTY 201 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCS--EEEEECSSH
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCCC--EEEEEeCCH
Confidence 57899999996 99999999999999862 488988864
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=95.13 E-value=0.062 Score=46.68 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=31.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+++|.|.| .|.+|..++..|++.|++ |++.+|++
T Consensus 7 ~~~~~IgiIG-~G~mG~~~A~~l~~~G~~---V~~~dr~~ 42 (306)
T 3l6d_A 7 SFEFDVSVIG-LGAMGTIMAQVLLKQGKR---VAIWNRSP 42 (306)
T ss_dssp CCSCSEEEEC-CSHHHHHHHHHHHHTTCC---EEEECSSH
T ss_pred cCCCeEEEEC-CCHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 3457899997 799999999999999998 88888874
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=95.07 E-value=0.06 Score=47.74 Aligned_cols=118 Identities=14% Similarity=0.134 Sum_probs=66.9
Q ss_pred ccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC---Cccc----------HHHHHHHHHHhHHHhhhh
Q psy17679 37 PMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK---KGKD----------IQERLDAIFEDRLFWRLR 103 (303)
Q Consensus 37 ~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~---~~~~----------~~~~l~~l~~~~~~~~~~ 103 (303)
..+..++..+|+|.| .|.+|..+++.|...|.. .+++++... ++.. .+.+.+.+ ..++.
T Consensus 29 ~~q~~L~~~~VlivG-~GGlG~~ia~~La~~Gvg--~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~-----~~~l~ 100 (346)
T 1y8q_A 29 EAQKRLRASRVLLVG-LKGLGAEIAKNLILAGVK--GLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEAS-----LERAQ 100 (346)
T ss_dssp HHHHHHHTCEEEEEC-CSHHHHHHHHHHHHHTCS--EEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHH-----HHHHH
T ss_pred HHHHHHhCCeEEEEC-CCHHHHHHHHHHHHcCCC--EEEEEECCCcchhhCCCCCccccccCcCCHHHHH-----HHHHH
Confidence 334456778999999 589999999999999753 577775432 0000 00111111 11222
Q ss_pred ccCcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEE
Q psy17679 104 AEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFV 183 (303)
Q Consensus 104 ~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i 183 (303)
+-+|. .+++.+..++.+. ...+++++|+||.+... ...-..+-++|... + ..+|
T Consensus 101 ~lnp~--v~v~~~~~~~~~~--------~~~~~~~~dvVv~~~d~--------------~~~r~~ln~~~~~~-~-ip~i 154 (346)
T 1y8q_A 101 NLNPM--VDVKVDTEDIEKK--------PESFFTQFDAVCLTCCS--------------RDVIVKVDQICHKN-S-IKFF 154 (346)
T ss_dssp HTCTT--SEEEEECSCGGGC--------CHHHHTTCSEEEEESCC--------------HHHHHHHHHHHHHT-T-CEEE
T ss_pred hHCCC--eEEEEEecccCcc--------hHHHhcCCCEEEEcCCC--------------HHHHHHHHHHHHHc-C-CCEE
Confidence 22221 3555666665542 24667899999976431 11223455666665 3 4667
Q ss_pred EEeCC
Q psy17679 184 HVSTA 188 (303)
Q Consensus 184 ~iSS~ 188 (303)
..++.
T Consensus 155 ~~~~~ 159 (346)
T 1y8q_A 155 TGDVF 159 (346)
T ss_dssp EEEEE
T ss_pred EEeec
Confidence 66555
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=95.06 E-value=0.29 Score=41.01 Aligned_cols=77 Identities=17% Similarity=0.167 Sum_probs=46.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+||.|.|++|-+|+.+++.+.+. ++++ |-+++|+.+ +++++. .... +..|++.+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~el--va~~d~~~d-------l~~~~~---------------~~~D-vvIDfT~p 55 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTL--SAELDAGDP-------LSLLTD---------------GNTE-VVIDFTHP 55 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEE--EEEECTTCC-------THHHHH---------------TTCC-EEEECSCT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEE--EEEEccCCC-------HHHHhc---------------cCCc-EEEEccCh
Confidence 47999999999999999999865 5652 334444322 111111 1222 67788887
Q ss_pred CCCCCHHHHHHHhc-cccEEEEccee
Q psy17679 124 GLGLSETDRATLVK-QVNIVFHGAAT 148 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-~~dvVi~~a~~ 148 (303)
+. ....+..+.+ +.++|+-+.|.
T Consensus 56 ~a--~~~~~~~a~~~g~~~VigTTG~ 79 (245)
T 1p9l_A 56 DV--VMGNLEFLIDNGIHAVVGTTGF 79 (245)
T ss_dssp TT--HHHHHHHHHHTTCEEEECCCCC
T ss_pred HH--HHHHHHHHHHcCCCEEEcCCCC
Confidence 73 1222223233 78888877764
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=95.06 E-value=0.015 Score=48.90 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=28.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|+++||.|+|+ |.+|+.+++.+.+.+++ -|-+++|++
T Consensus 1 M~MmkI~ViGa-GrMG~~i~~~l~~~~~e--Lva~~d~~~ 37 (243)
T 3qy9_A 1 MASMKILLIGY-GAMNQRVARLAEEKGHE--IVGVIENTP 37 (243)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEECSSC
T ss_pred CCceEEEEECc-CHHHHHHHHHHHhCCCE--EEEEEecCc
Confidence 34689999999 99999999999988553 244566654
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=95.02 E-value=0.045 Score=47.00 Aligned_cols=36 Identities=11% Similarity=0.051 Sum_probs=31.0
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
+.++|.|.| .|.+|..++..|...|++ |++.+|++.
T Consensus 3 ~~~kV~VIG-aG~mG~~iA~~la~~G~~---V~l~d~~~~ 38 (283)
T 4e12_A 3 GITNVTVLG-TGVLGSQIAFQTAFHGFA---VTAYDINTD 38 (283)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCe---EEEEeCCHH
Confidence 357899998 599999999999999987 889988753
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=94.88 E-value=0.076 Score=46.33 Aligned_cols=75 Identities=9% Similarity=0.111 Sum_probs=49.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
..+.+|+|+||+|.+|...++.+...|.. |++++++.. .+.+.++ +.. ...|..
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~---vi~~~~~~~----~~~~~~l------------------Ga~-~~i~~~ 204 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTT---VITTASKRN----HAFLKAL------------------GAE-QCINYH 204 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEECHHH----HHHHHHH------------------TCS-EEEETT
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCE---EEEEeccch----HHHHHHc------------------CCC-EEEeCC
Confidence 35679999999999999999999888876 777765321 1111111 111 123544
Q ss_pred CCCCCCCHHHHHHHhccccEEEEccee
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAAT 148 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~ 148 (303)
+.+ .+....+++|+|+++.|.
T Consensus 205 ~~~------~~~~~~~g~D~v~d~~g~ 225 (321)
T 3tqh_A 205 EED------FLLAISTPVDAVIDLVGG 225 (321)
T ss_dssp TSC------HHHHCCSCEEEEEESSCH
T ss_pred Ccc------hhhhhccCCCEEEECCCc
Confidence 443 255556789999999884
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=94.85 E-value=0.12 Score=45.61 Aligned_cols=36 Identities=17% Similarity=0.161 Sum_probs=27.8
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
+++|.|.||||++|..+++.|.++.+....+..++.
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s 36 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFAS 36 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEEC
Confidence 368999999999999999988776445444665554
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=94.84 E-value=0.038 Score=49.27 Aligned_cols=75 Identities=9% Similarity=0.040 Sum_probs=49.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+.+|+|+|+ |.+|...++.+...|.. |+++++++.... . +.. . -+.. ...|..+
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~---Vi~~~~~~~~~~---~---~~~------------~--lGa~-~v~~~~~ 241 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSK---VTVISTSPSKKE---E---ALK------------N--FGAD-SFLVSRD 241 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCGGGHH---H---HHH------------T--SCCS-EEEETTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCE---EEEEeCCHHHHH---H---HHH------------h--cCCc-eEEeccC
Confidence 6789999996 99999999999888875 888888754221 1 110 0 1111 1234444
Q ss_pred CCCCCCHHHHHHHhccccEEEEccee
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAAT 148 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~ 148 (303)
.+ .+.++..++|+||+++|.
T Consensus 242 ~~------~~~~~~~~~D~vid~~g~ 261 (366)
T 1yqd_A 242 QE------QMQAAAGTLDGIIDTVSA 261 (366)
T ss_dssp HH------HHHHTTTCEEEEEECCSS
T ss_pred HH------HHHHhhCCCCEEEECCCc
Confidence 22 455555689999999985
|
| >1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A | Back alignment and structure |
|---|
Probab=94.83 E-value=0.064 Score=51.31 Aligned_cols=103 Identities=14% Similarity=0.150 Sum_probs=60.4
Q ss_pred CCCccccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC---cccHH-----HHHHHHHHhHHHhhhhcc
Q psy17679 34 IGTPMQEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK---GKDIQ-----ERLDAIFEDRLFWRLRAE 105 (303)
Q Consensus 34 ~~~~~~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~---~~~~~-----~~l~~l~~~~~~~~~~~~ 105 (303)
|+...+..+...+|+|.| .|.+|..+++.|...|.. +|++++...= +...+ +.+-..+...+..++..-
T Consensus 7 ~G~e~Q~kL~~s~VlVVG-aGGLGsevak~La~aGVG--~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~i 83 (640)
T 1y8q_B 7 LPRELAEAVAGGRVLVVG-AGGIGCELLKNLVLTGFS--HIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQF 83 (640)
T ss_dssp CCHHHHHHHHHCEEEEEC-CSHHHHHHHHHHHHHTCC--EEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTT
T ss_pred cCHHHHHHHhcCeEEEEC-cCHHHHHHHHHHHHcCCC--eEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHH
Confidence 444555567778999999 589999999999999764 5888776531 00000 000000001111222322
Q ss_pred CcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcce
Q psy17679 106 VPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAA 147 (303)
Q Consensus 106 ~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~ 147 (303)
+|. .+++.+..++++..+ ...+++++|+||.+..
T Consensus 84 NP~--v~V~a~~~~i~~~~~------~~~~~~~~DlVvda~D 117 (640)
T 1y8q_B 84 YPK--ANIVAYHDSIMNPDY------NVEFFRQFILVMNALD 117 (640)
T ss_dssp CTT--CEEEEEESCTTSTTS------CHHHHTTCSEEEECCS
T ss_pred CCC--CeEEEEecccchhhh------hHhhhcCCCEEEECCC
Confidence 332 466777777765431 2456789999998744
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=94.72 E-value=0.073 Score=45.95 Aligned_cols=36 Identities=11% Similarity=0.144 Sum_probs=30.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+.+++|+|.|+++.+|+.++..|+..|.. |+++.+
T Consensus 162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~hs 197 (301)
T 1a4i_A 162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNAT---VTTCHS 197 (301)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhCCCe---EEEEEC
Confidence 467899999999989999999999999876 776654
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=94.67 E-value=0.035 Score=49.12 Aligned_cols=36 Identities=14% Similarity=0.184 Sum_probs=31.6
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+.+|+|+||+|.+|...++.+...|.. |+++++++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~---Vi~~~~~~ 185 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLR---VITTASRN 185 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEECCSH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCE---EEEEeCCH
Confidence 5789999999999999999999888875 88888864
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=94.64 E-value=0.019 Score=49.71 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=29.5
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
+|+|.|.| .|.+|..++..|.+.|++ |++++|++
T Consensus 3 ~m~i~iiG-~G~~G~~~a~~l~~~g~~---V~~~~r~~ 36 (316)
T 2ew2_A 3 AMKIAIAG-AGAMGSRLGIMLHQGGND---VTLIDQWP 36 (316)
T ss_dssp -CEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CCeEEEEC-cCHHHHHHHHHHHhCCCc---EEEEECCH
Confidence 46899999 599999999999999986 88998864
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=94.58 E-value=0.064 Score=46.01 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=31.1
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+.+++|+|.|+++.+|+.++..|+..|.. |+++.+
T Consensus 156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAt---Vtv~hs 191 (288)
T 1b0a_A 156 DTFGLNAVVIGASNIVGRPMSMELLLAGCT---TTVTHR 191 (288)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTCE---EEEECS
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHCCCe---EEEEeC
Confidence 477899999999999999999999999876 777654
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=94.53 E-value=0.083 Score=45.94 Aligned_cols=38 Identities=21% Similarity=0.247 Sum_probs=32.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG 83 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~ 83 (303)
.++|+|.|.| .|.+|..++..|.+.|++ |++.+|++..
T Consensus 19 ~~m~~I~iIG-~G~mG~~~A~~l~~~G~~---V~~~dr~~~~ 56 (310)
T 3doj_A 19 SHMMEVGFLG-LGIMGKAMSMNLLKNGFK---VTVWNRTLSK 56 (310)
T ss_dssp CCSCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSGGG
T ss_pred ccCCEEEEEC-ccHHHHHHHHHHHHCCCe---EEEEeCCHHH
Confidence 4457899998 799999999999999987 8899997653
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=94.53 E-value=0.13 Score=45.42 Aligned_cols=35 Identities=17% Similarity=0.082 Sum_probs=29.8
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
++|+|.|.| .|.+|..++..|.+.|++ |++++|++
T Consensus 3 ~~mki~iiG-~G~~G~~~a~~L~~~g~~---V~~~~r~~ 37 (359)
T 1bg6_A 3 ESKTYAVLG-LGNGGHAFAAYLALKGQS---VLAWDIDA 37 (359)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CcCeEEEEC-CCHHHHHHHHHHHhCCCE---EEEEeCCH
Confidence 447899998 599999999999999887 88888864
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=94.51 E-value=0.11 Score=44.82 Aligned_cols=39 Identities=15% Similarity=0.146 Sum_probs=34.1
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..+.+|+|.|.| .|.+|+.+++.|...|++ |++.+|+..
T Consensus 118 ~~l~g~tvGIIG-lG~IG~~vA~~l~~~G~~---V~~~dr~~~ 156 (290)
T 3gvx_A 118 TLLYGKALGILG-YGGIGRRVAHLAKAFGMR---VIAYTRSSV 156 (290)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHHHTCE---EEEECSSCC
T ss_pred eeeecchheeec-cCchhHHHHHHHHhhCcE---EEEEecccc
Confidence 347789999998 799999999999999987 889988754
|
| >3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* | Back alignment and structure |
|---|
Probab=94.49 E-value=0.17 Score=46.21 Aligned_cols=37 Identities=16% Similarity=0.116 Sum_probs=29.7
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+..|+|.|.| +|++|..++..|.+ |++ |++.+|++
T Consensus 32 r~~~~mkIaVIG-lG~mG~~lA~~La~-G~~---V~~~D~~~ 68 (432)
T 3pid_A 32 RGSEFMKITISG-TGYVGLSNGVLIAQ-NHE---VVALDIVQ 68 (432)
T ss_dssp ---CCCEEEEEC-CSHHHHHHHHHHHT-TSE---EEEECSCH
T ss_pred cccCCCEEEEEC-cCHHHHHHHHHHHc-CCe---EEEEecCH
Confidence 345567999998 69999999998887 887 99999974
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=94.45 E-value=0.087 Score=48.21 Aligned_cols=33 Identities=15% Similarity=0.157 Sum_probs=29.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|+|.|.| +|++|..++..|.+.|++ |++++|++
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~---V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHE---VIGVDVSS 33 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCE---EEEEECCH
Confidence 5799998 799999999999999987 88998864
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=94.42 E-value=0.077 Score=48.81 Aligned_cols=36 Identities=14% Similarity=0.221 Sum_probs=30.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
..+.+|+|+||+|.+|...++.+...|.. |++++++
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~---vi~~~~~ 262 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGAN---PICVVSS 262 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCe---EEEEECC
Confidence 34679999999999999999999888876 7777775
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=94.42 E-value=0.13 Score=44.89 Aligned_cols=35 Identities=23% Similarity=0.307 Sum_probs=30.8
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+|+|.|.| .|.+|..++..|.+.|++ |++.+|++
T Consensus 30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~---V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLG-TGSMGLPMARRLCEAGYA---LQVWNRTP 64 (320)
T ss_dssp CCSEEEEEC-CTTTHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHhCCCe---EEEEcCCH
Confidence 457899997 699999999999999987 88998874
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=94.37 E-value=0.18 Score=44.95 Aligned_cols=35 Identities=14% Similarity=0.259 Sum_probs=24.2
Q ss_pred cEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVR 79 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R 79 (303)
++|.|.||||++|..+++.|+++ .+....+..++.
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss 36 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFST 36 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEec
Confidence 57999999999999999945444 221234555543
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=94.37 E-value=0.087 Score=47.19 Aligned_cols=71 Identities=11% Similarity=0.080 Sum_probs=50.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+.+++|+|.| .|.+|+.+++.+.+.|++ |++++..+.... . . ---.++..|+
T Consensus 9 ~~~~~~IlIlG-~G~lg~~la~aa~~lG~~---viv~d~~~~~p~-~-~---------------------~ad~~~~~~~ 61 (377)
T 3orq_A 9 LKFGATIGIIG-GGQLGKMMAQSAQKMGYK---VVVLDPSEDCPC-R-Y---------------------VAHEFIQAKY 61 (377)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEEESCTTCTT-G-G---------------------GSSEEEECCT
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCE---EEEEECCCCChh-h-h---------------------hCCEEEECCC
Confidence 35678999998 589999999999999997 778877543111 0 0 1113566787
Q ss_pred CCCCCCCCHHHHHHHhccccEEEE
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFH 144 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~ 144 (303)
.|.+ .+..+.+++|+|+.
T Consensus 62 ~d~~------~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 62 DDEK------ALNQLGQKCDVITY 79 (377)
T ss_dssp TCHH------HHHHHHHHCSEEEE
T ss_pred CCHH------HHHHHHHhCCccee
Confidence 7755 67788888998754
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=94.34 E-value=0.081 Score=46.23 Aligned_cols=34 Identities=21% Similarity=0.241 Sum_probs=30.4
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
+|+|+||+|.+|...++.+...|.. |+++++++.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~---vi~~~~~~~ 185 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYT---VEASTGKAA 185 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCC---EEEEESCTT
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCE---EEEEECCHH
Confidence 7999999999999999999888886 888888754
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=94.31 E-value=0.084 Score=45.12 Aligned_cols=36 Identities=14% Similarity=0.097 Sum_probs=30.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhc--CCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRS--CPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~--g~~v~~V~~~~R 79 (303)
.+++++++|.|+++.+|+.++..|+.. |.. |+++.|
T Consensus 155 ~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~at---Vtv~h~ 192 (281)
T 2c2x_A 155 SIAGAHVVVIGRGVTVGRPLGLLLTRRSENAT---VTLCHT 192 (281)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHTSTTTCCE---EEEECT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHhcCCCCCE---EEEEEC
Confidence 478899999999989999999999988 555 777655
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=94.31 E-value=0.038 Score=50.73 Aligned_cols=36 Identities=11% Similarity=0.170 Sum_probs=30.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
..+++|+|+||+|.+|...++.+...|.. |++++++
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~---vi~~~~~ 254 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGI---PVAVVSS 254 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCE---EEEEeCC
Confidence 34689999999999999999999888876 7777775
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=94.29 E-value=0.13 Score=45.07 Aligned_cols=39 Identities=15% Similarity=0.241 Sum_probs=34.1
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..+.+|+|.|.| .|.||+.+++.|...|.+ |++.+|+..
T Consensus 133 ~~l~gktvGIiG-lG~IG~~vA~~l~~~G~~---V~~~dr~~~ 171 (324)
T 3evt_A 133 STLTGQQLLIYG-TGQIGQSLAAKASALGMH---VIGVNTTGH 171 (324)
T ss_dssp CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEEESSCC
T ss_pred ccccCCeEEEEC-cCHHHHHHHHHHHhCCCE---EEEECCCcc
Confidence 357789999998 799999999999999987 888898754
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=94.27 E-value=0.19 Score=44.92 Aligned_cols=36 Identities=14% Similarity=0.231 Sum_probs=25.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVR 79 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R 79 (303)
+++|-|.||||++|..++++|+++ .+....+..++.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss 40 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFST 40 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEec
Confidence 468999999999999999955444 221234555543
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=94.05 E-value=0.12 Score=45.61 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=31.4
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+++++|+|.| .|.+|.++++.|...|.. +++++++..
T Consensus 31 kL~~~~VlIvG-aGGlGs~va~~La~aGVg--~ItlvD~D~ 68 (340)
T 3rui_A 31 IIKNTKVLLLG-AGTLGCYVSRALIAWGVR--KITFVDNGT 68 (340)
T ss_dssp HHHTCEEEEEC-CSHHHHHHHHHHHHTTCC--EEEEECCCB
T ss_pred HHhCCEEEEEC-CCHHHHHHHHHHHHcCCC--EEEEecCCE
Confidence 46678999998 589999999999998754 688877753
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=94.05 E-value=0.15 Score=45.68 Aligned_cols=71 Identities=15% Similarity=0.085 Sum_probs=48.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+.+++|+|.| .|.+|+.+++.+.+.|++ |++++..+.... . ..--..+..+.
T Consensus 11 ~~~~k~IlIlG-~G~~g~~la~aa~~~G~~---vi~~d~~~~~~~-~----------------------~~ad~~~~~~~ 63 (389)
T 3q2o_A 11 ILPGKTIGIIG-GGQLGRMMALAAKEMGYK---IAVLDPTKNSPC-A----------------------QVADIEIVASY 63 (389)
T ss_dssp CCTTSEEEEEC-CSHHHHHHHHHHHHTTCE---EEEEESSTTCTT-T----------------------TTCSEEEECCT
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCE---EEEEeCCCCCch-H----------------------HhCCceEecCc
Confidence 46778999998 588999999999999998 777776543110 0 00112445666
Q ss_pred CCCCCCCCHHHHHHHhccccEEEE
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFH 144 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~ 144 (303)
.|.+ .+.++.+.+|+|..
T Consensus 64 ~d~~------~l~~~~~~~dvI~~ 81 (389)
T 3q2o_A 64 DDLK------AIQHLAEISDVVTY 81 (389)
T ss_dssp TCHH------HHHHHHHTCSEEEE
T ss_pred CCHH------HHHHHHHhCCEeee
Confidence 6644 67777778888754
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=94.03 E-value=0.16 Score=44.36 Aligned_cols=37 Identities=11% Similarity=0.162 Sum_probs=32.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
.+.+++++|.|++..+|+.++..|+..|.. |+++.|+
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAt---Vtv~nR~ 210 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGAT---VYSVDVN 210 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCE---EEEECSS
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCE---EEEEeCc
Confidence 467899999998888999999999999866 8888876
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=94.01 E-value=0.09 Score=45.08 Aligned_cols=35 Identities=23% Similarity=0.294 Sum_probs=30.9
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG 83 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~ 83 (303)
|+|.|.| .|.+|..++..|.+.|++ |++.+|++..
T Consensus 2 ~~I~iiG-~G~mG~~~a~~l~~~G~~---V~~~dr~~~~ 36 (287)
T 3pdu_A 2 TTYGFLG-LGIMGGPMAANLVRAGFD---VTVWNRNPAK 36 (287)
T ss_dssp CCEEEEC-CSTTHHHHHHHHHHHTCC---EEEECSSGGG
T ss_pred CeEEEEc-cCHHHHHHHHHHHHCCCe---EEEEcCCHHH
Confidence 5799998 799999999999999998 8899998653
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=94.00 E-value=0.25 Score=46.88 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=31.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.++.++|+|.| .|.+|.++++.|...|.. ++++++++.
T Consensus 323 kL~~arVLIVG-aGGLGs~vA~~La~aGVG--~ItLvD~D~ 360 (615)
T 4gsl_A 323 IIKNTKVLLLG-AGTLGCYVSRALIAWGVR--KITFVDNGT 360 (615)
T ss_dssp HHHTCEEEEEC-CSHHHHHHHHHHHHTTCC--EEEEECCCB
T ss_pred HHhCCeEEEEC-CCHHHHHHHHHHHHcCCC--EEEEEcCCC
Confidence 46678999998 589999999999998754 688888754
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=94.00 E-value=0.23 Score=41.09 Aligned_cols=73 Identities=8% Similarity=0.173 Sum_probs=50.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++++|||.|| |-+|...++.|++.|.. |++++.... ..++++... .+++++..++
T Consensus 28 ~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~---VtVvap~~~-----~~l~~l~~~--------------~~i~~i~~~~ 84 (223)
T 3dfz_A 28 DLKGRSVLVVGG-GTIATRRIKGFLQEGAA---ITVVAPTVS-----AEINEWEAK--------------GQLRVKRKKV 84 (223)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHGGGCCC---EEEECSSCC-----HHHHHHHHT--------------TSCEEECSCC
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCE---EEEECCCCC-----HHHHHHHHc--------------CCcEEEECCC
Confidence 477899999995 89999999999999988 777776432 223333221 4677776655
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcce
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAA 147 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~ 147 (303)
.+. -+.++|.||-+.+
T Consensus 85 ~~~-----------dL~~adLVIaAT~ 100 (223)
T 3dfz_A 85 GEE-----------DLLNVFFIVVATN 100 (223)
T ss_dssp CGG-----------GSSSCSEEEECCC
T ss_pred CHh-----------HhCCCCEEEECCC
Confidence 432 2357899885544
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=93.96 E-value=0.062 Score=46.28 Aligned_cols=38 Identities=21% Similarity=0.393 Sum_probs=28.7
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
+++||.|.|++|-+|+.+++.+.+. .++.-|-+++|+.
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~-~~~eLvg~vd~~~ 57 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRR-KDVELCAVLVRKG 57 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTC-SSEEEEEEBCCTT
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCC
Confidence 3469999999999999999999876 3433455667754
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=93.95 E-value=0.036 Score=47.48 Aligned_cols=36 Identities=25% Similarity=0.514 Sum_probs=30.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.++++|+|.| +|.+|+.++..|.+.|.+ |++..|+.
T Consensus 127 ~~~~~v~iiG-aG~~g~aia~~L~~~g~~---V~v~~r~~ 162 (275)
T 2hk9_A 127 VKEKSILVLG-AGGASRAVIYALVKEGAK---VFLWNRTK 162 (275)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHHTCE---EEEECSSH
T ss_pred cCCCEEEEEC-chHHHHHHHHHHHHcCCE---EEEEECCH
Confidence 4568999999 589999999999999864 88888864
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=93.93 E-value=0.14 Score=47.20 Aligned_cols=95 Identities=19% Similarity=0.291 Sum_probs=60.5
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
-++|+|.|| |-+|.++++.|.+. +. |.++.+++..+. .+.+. .++..++.||.+|.
T Consensus 235 ~~~v~I~Gg-G~ig~~lA~~L~~~-~~---v~iIE~d~~r~~------~la~~-------------l~~~~Vi~GD~td~ 290 (461)
T 4g65_A 235 YRRIMIVGG-GNIGASLAKRLEQT-YS---VKLIERNLQRAE------KLSEE-------------LENTIVFCGDAADQ 290 (461)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTT-SE---EEEEESCHHHHH------HHHHH-------------CTTSEEEESCTTCH
T ss_pred ccEEEEEcc-hHHHHHHHHHhhhc-Cc---eEEEecCHHHHH------HHHHH-------------CCCceEEeccccch
Confidence 368999985 89999999998543 54 878877643222 11111 26788999999997
Q ss_pred CCCCCHHHHHH-HhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEE
Q psy17679 124 GLGLSETDRAT-LVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFV 183 (303)
Q Consensus 124 ~~~~~~~~~~~-~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i 183 (303)
+ -+.+ -+++.|++|-..+. . +.|+ .....|++. ++++.|
T Consensus 291 ~------~L~ee~i~~~D~~ia~T~~------D----e~Ni----~~~llAk~~-gv~kvI 330 (461)
T 4g65_A 291 E------LLTEENIDQVDVFIALTNE------D----ETNI----MSAMLAKRM-GAKKVM 330 (461)
T ss_dssp H------HHHHTTGGGCSEEEECCSC------H----HHHH----HHHHHHHHT-TCSEEE
T ss_pred h------hHhhcCchhhcEEEEcccC------c----HHHH----HHHHHHHHc-CCcccc
Confidence 6 2333 24589999965442 1 1243 234456667 776655
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=93.89 E-value=0.13 Score=44.04 Aligned_cols=35 Identities=17% Similarity=0.354 Sum_probs=30.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG 83 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~ 83 (303)
|+|.|.| +|.+|..++..|.+.|++ |++.+|++..
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~~G~~---V~~~dr~~~~ 36 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVKAGCS---VTIWNRSPEK 36 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSGGG
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCe---EEEEcCCHHH
Confidence 6899998 699999999999999987 8899997653
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=93.89 E-value=0.077 Score=45.48 Aligned_cols=39 Identities=21% Similarity=0.270 Sum_probs=32.3
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
++|+|.|.| +|.+|..++..|++.|+....|++.+|++.
T Consensus 2 ~~~~I~iIG-~G~mG~aia~~l~~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 2 NTSNITFIG-GGNMARNIVVGLIANGYDPNRICVTNRSLD 40 (280)
T ss_dssp CCSCEEEES-CSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred CCCEEEEEc-ccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence 457899998 599999999999999984445999999754
|
| >1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=93.86 E-value=0.59 Score=43.15 Aligned_cols=124 Identities=15% Similarity=0.199 Sum_probs=68.0
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhc--CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRS--CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~--g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++||.|.||.+..|..++..|+.. +.....|...++++..... +.++.. ... +... ....+...
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~---~~~~~~-~~l---~~~~----~~~~I~~t-- 93 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDR---IAGACD-VFI---REKA----PDIEFAAT-- 93 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHH---HHHHHH-HHH---HHHC----TTSEEEEE--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHH---HHHHHH-HHh---ccCC----CCCEEEEE--
Confidence 3469999998665577788888887 3323459999997532221 111111 110 1100 12222222
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceeccccc-cHH--------------------HHHhhhHHHHHHHHHHHHhcCCC
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVRFDE-HIK--------------------MAVKINVCGVQAMLQLAREMKDL 179 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~-~~~--------------------~~~~~N~~~~~~ll~~a~~~~~~ 179 (303)
+ ++..+++++|+||.+++...... ... .....|+...+.+++.+.+....
T Consensus 94 ~---------D~~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~ 164 (472)
T 1u8x_X 94 T---------DPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPD 164 (472)
T ss_dssp S---------CHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred C---------CHHHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCC
Confidence 1 36678899999999998743210 000 11233566667777777776233
Q ss_pred ceEEEEeCC
Q psy17679 180 KAFVHVSTA 188 (303)
Q Consensus 180 ~r~i~iSS~ 188 (303)
..|+.+|..
T Consensus 165 A~ii~~TNP 173 (472)
T 1u8x_X 165 AWMLNYSNP 173 (472)
T ss_dssp CEEEECCSC
T ss_pred eEEEEeCCc
Confidence 445555544
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=93.85 E-value=0.14 Score=48.48 Aligned_cols=37 Identities=19% Similarity=0.326 Sum_probs=30.4
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
.++.++|+|.| .|.+|.++++.|...|. .+|++++.+
T Consensus 324 kL~~~kVLIVG-aGGLGs~va~~La~aGV--G~ItLvD~D 360 (598)
T 3vh1_A 324 IIKNTKVLLLG-AGTLGCYVSRALIAWGV--RKITFVDNG 360 (598)
T ss_dssp HHHTCEEEEEC-CSHHHHHHHHHHHTTTC--CEEEEECCS
T ss_pred HHhCCeEEEEC-CCHHHHHHHHHHHHcCC--CEEEEECCC
Confidence 45678999998 68999999999999875 368888654
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=93.85 E-value=0.084 Score=47.13 Aligned_cols=36 Identities=14% Similarity=0.159 Sum_probs=30.2
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.+.+|||+|+ |.+|...++.+...|.. |+++++++.
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~---Vi~~~~~~~ 229 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAH---VVAFTTSEA 229 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESSGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCE---EEEEeCCHH
Confidence 4679999997 88999999888888876 888888754
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=93.82 E-value=0.25 Score=43.80 Aligned_cols=38 Identities=24% Similarity=0.209 Sum_probs=33.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.+.+|+|.|.| .|-||+.+++.|...|.+ |++.+|++.
T Consensus 161 ~l~gktvGIIG-~G~IG~~vA~~l~~~G~~---V~~~dr~~~ 198 (351)
T 3jtm_A 161 DLEGKTIGTVG-AGRIGKLLLQRLKPFGCN---LLYHDRLQM 198 (351)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHGGGCCE---EEEECSSCC
T ss_pred cccCCEEeEEE-eCHHHHHHHHHHHHCCCE---EEEeCCCcc
Confidence 47789999998 799999999999999987 888888753
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=93.76 E-value=0.045 Score=45.12 Aligned_cols=37 Identities=16% Similarity=0.190 Sum_probs=31.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEE-EeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYL-LVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~-~~R~~~ 82 (303)
|++|+|.|.| +|.+|..++..|.+.|++ |++ .+|++.
T Consensus 21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~---V~~v~~r~~~ 58 (220)
T 4huj_A 21 QSMTTYAIIG-AGAIGSALAERFTAAQIP---AIIANSRGPA 58 (220)
T ss_dssp GGSCCEEEEE-CHHHHHHHHHHHHHTTCC---EEEECTTCGG
T ss_pred hcCCEEEEEC-CCHHHHHHHHHHHhCCCE---EEEEECCCHH
Confidence 4567899999 899999999999999987 766 777654
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=93.74 E-value=0.17 Score=46.49 Aligned_cols=76 Identities=12% Similarity=0.206 Sum_probs=51.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+|+|.|. |..|..+++.|.+.|++ |++.++....... ..+.+.. .++.+..+.-.
T Consensus 7 ~~~k~v~viG~-G~sG~s~A~~l~~~G~~---V~~~D~~~~~~~~--~~~~L~~---------------~gi~~~~g~~~ 65 (451)
T 3lk7_A 7 FENKKVLVLGL-ARSGEAAARLLAKLGAI---VTVNDGKPFDENP--TAQSLLE---------------EGIKVVCGSHP 65 (451)
T ss_dssp TTTCEEEEECC-TTTHHHHHHHHHHTTCE---EEEEESSCGGGCH--HHHHHHH---------------TTCEEEESCCC
T ss_pred cCCCEEEEEee-CHHHHHHHHHHHhCCCE---EEEEeCCcccCCh--HHHHHHh---------------CCCEEEECCCh
Confidence 46789999996 88999999999999998 9898886532111 1112211 46666665421
Q ss_pred CCCCCCCHHHHHHHhcc-ccEEEEcceec
Q psy17679 122 LPGLGLSETDRATLVKQ-VNIVFHGAATV 149 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~-~dvVi~~a~~~ 149 (303)
+ ..+.+ +|.||...|..
T Consensus 66 ~-----------~~~~~~~d~vv~spgi~ 83 (451)
T 3lk7_A 66 L-----------ELLDEDFCYMIKNPGIP 83 (451)
T ss_dssp G-----------GGGGSCEEEEEECTTSC
T ss_pred H-----------HhhcCCCCEEEECCcCC
Confidence 1 23345 89899888874
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=93.73 E-value=0.1 Score=45.08 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=30.2
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
++|+|.|.| .|.+|..++..|.+.|++ |++.+|++
T Consensus 6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~---V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVG-LGSMGMGAARSCLRAGLS---TWGADLNP 40 (303)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCe---EEEEECCH
Confidence 347899997 799999999999999987 88998874
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=93.72 E-value=0.19 Score=44.52 Aligned_cols=77 Identities=14% Similarity=0.237 Sum_probs=47.3
Q ss_pred cEEEEeCCcchhHHHH-HHHH-HhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 45 KTIFLTGGTGFMGKTV-VEKL-LRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 45 ~~vlItGatG~iG~~l-~~~L-l~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+|+|+|+ |.+|... ++.+ ...|.. +|+++++++......+.+.+ -+...+ |..+
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~--~Vi~~~~~~~~~~~~~~~~~------------------lGa~~v--~~~~ 230 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGYE--NLYCLGRRDRPDPTIDIIEE------------------LDATYV--DSRQ 230 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCCC--EEEEEECCCSSCHHHHHHHH------------------TTCEEE--ETTT
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCCc--EEEEEeCCcccHHHHHHHHH------------------cCCccc--CCCc
Confidence 89999999 9999998 7777 666653 48888887541001122111 234444 6655
Q ss_pred CCCCCCHHHHHHHhccccEEEEccee
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAAT 148 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~ 148 (303)
.+. .++.++-.++|+||++.|.
T Consensus 231 ~~~----~~i~~~~gg~Dvvid~~g~ 252 (357)
T 2b5w_A 231 TPV----EDVPDVYEQMDFIYEATGF 252 (357)
T ss_dssp SCG----GGHHHHSCCEEEEEECSCC
T ss_pred cCH----HHHHHhCCCCCEEEECCCC
Confidence 431 1233332279999999884
|
| >3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A* | Back alignment and structure |
|---|
Probab=93.70 E-value=0.21 Score=43.72 Aligned_cols=34 Identities=12% Similarity=0.260 Sum_probs=30.1
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.+|.|.| +|.+|+.++..++..|++ |++.+.++.
T Consensus 7 ~~VaViG-aG~MG~giA~~~a~~G~~---V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVG-SGLVGRSWAMLFASGGFR---VKLYDIEPR 40 (319)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCC---EEEECSCHH
T ss_pred CeEEEEC-CcHHHHHHHHHHHhCCCe---EEEEECCHH
Confidence 5799998 599999999999999999 888888753
|
| >4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=93.69 E-value=0.13 Score=45.47 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=33.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.+.+|+|.|.| .|-+|+.+++.|...|.+ |++.+|+..
T Consensus 168 ~l~gktiGIIG-lG~IG~~vA~~l~~~G~~---V~~~dr~~~ 205 (340)
T 4dgs_A 168 SPKGKRIGVLG-LGQIGRALASRAEAFGMS---VRYWNRSTL 205 (340)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCE---EEEECSSCC
T ss_pred cccCCEEEEEC-CCHHHHHHHHHHHHCCCE---EEEEcCCcc
Confidence 57789999998 699999999999998886 888888753
|
| >3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=93.68 E-value=0.22 Score=43.89 Aligned_cols=38 Identities=21% Similarity=0.085 Sum_probs=32.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.+.++++.|.| .|-||+.+++.+...|.. |++.++...
T Consensus 138 ~l~g~tvGIiG-~G~IG~~va~~~~~fg~~---v~~~d~~~~ 175 (334)
T 3kb6_A 138 ELNRLTLGVIG-TGRIGSRVAMYGLAFGMK---VLCYDVVKR 175 (334)
T ss_dssp CGGGSEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSCC
T ss_pred eecCcEEEEEC-cchHHHHHHHhhcccCce---eeecCCccc
Confidence 46779999998 799999999999999887 888887643
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=93.65 E-value=0.18 Score=44.56 Aligned_cols=36 Identities=17% Similarity=0.163 Sum_probs=29.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+.+|||+|+ |.+|...++.+...|.. |+++++++
T Consensus 167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~---Vi~~~~~~ 202 (352)
T 1e3j_A 167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAF---VVCTARSP 202 (352)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCE---EEEEcCCH
Confidence 35679999996 99999999988888876 88888764
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=93.62 E-value=0.18 Score=45.23 Aligned_cols=38 Identities=11% Similarity=0.081 Sum_probs=32.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
...+++|+|+| .|-+|..+++.+...|.. |++.+|++.
T Consensus 169 ~l~g~~V~ViG-aG~iG~~aa~~a~~~Ga~---V~~~d~~~~ 206 (384)
T 1l7d_A 169 TVPPARVLVFG-VGVAGLQAIATAKRLGAV---VMATDVRAA 206 (384)
T ss_dssp EECCCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSCST
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCE---EEEEeCCHH
Confidence 35678999999 599999999999999875 889998764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 303 | ||||
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 3e-07 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 8e-07 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 2e-06 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 1e-05 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 2e-05 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 2e-05 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 2e-05 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 5e-05 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 1e-04 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-04 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 4e-04 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 5e-04 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 8e-04 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 0.001 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 0.003 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 0.004 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 0.004 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 0.004 |
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.9 bits (116), Expect = 3e-07
Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 37/164 (22%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104
K I +TGG GF+G + +KL+ G ++ D F +
Sbjct: 2 KRILITGGAGFVGSHLTDKLM---------------MDGHEV------TVVDNFFTGRKR 40
Query: 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIK---MAVKI 161
V + + + + L +V+ ++H A+ ++ +K
Sbjct: 41 NVEHWIGHENFELINHDV---------VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKT 91
Query: 162 NVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRER--IDEEFYP 203
N G ML LA+ + + ST+ + E E+++
Sbjct: 92 NTIGTLNMLGLAKRVG--ARLLLASTSEVYGDPEVHPQSEDYWG 133
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 47.4 bits (112), Expect = 8e-07
Identities = 40/177 (22%), Positives = 67/177 (37%), Gaps = 34/177 (19%)
Query: 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEV 106
I +TGG GF+G VV ++++ + + + ++ E L I E + A++
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQD--TVVNIDKLTYAGNL-ESLSDISESNRYNFEHADI 59
Query: 107 PDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIK---MAVKINV 163
D +E R Q + V H AA D I ++ N+
Sbjct: 60 CDS------------------AEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNI 101
Query: 164 CGVQAMLQLAREM--------KDLKAFVHVST--AFTHCPRERIDEEFYPVPLKYEN 210
G A+L++AR+ K+ F H+ST + P E +PL E
Sbjct: 102 VGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET 158
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 46.3 bits (109), Expect = 2e-06
Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 18/166 (10%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104
K +TG TG G + E LL ++ + R + ER+D I++D +
Sbjct: 2 KVALITGVTGQDGSYLAEFLLEKGY---EVHGIKRRASSFNT-ERVDHIYQDPHTCNPKF 57
Query: 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVC 164
+ GD S L+ R +V + + E + ++
Sbjct: 58 HL---------HYGDLSDTSN-LTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAM 107
Query: 165 GVQAMLQLARE--MKDLKAFVHVSTA--FTHCPRERIDEEFYPVPL 206
G +L+ R ++ F ST+ + E P
Sbjct: 108 GTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPR 153
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 44.0 bits (102), Expect = 1e-05
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR-PKKGKDIQERLDAIFEDRLFWR 101
+ +TG GF+ VVE+LL H + R K ++Q+R DA + R
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLE---HGYKVRGTARSASKLANLQKRWDAKYPGRFETA 66
Query: 102 LRAEVPDF 109
+ ++
Sbjct: 67 VVEDMLKQ 74
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.8 bits (99), Expect = 2e-05
Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 38 MQEFYR--DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFE 95
++E +R +K++F+ G +G G+ +++++L + L+ R K D + + E
Sbjct: 6 LREDFRMQNKSVFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRKLTFDEEAYKNVNQE 64
Query: 96 DRLFW 100
F
Sbjct: 65 VVDFE 69
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 43.5 bits (101), Expect = 2e-05
Identities = 39/256 (15%), Positives = 73/256 (28%), Gaps = 36/256 (14%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104
++ +TG TG G + + LL ++ LV + D + RL + +
Sbjct: 1 RSALVTGITGQDGAYLAKLLLEKGY---RVHGLVARRSS-DTRWRLRELGIEGDIQYEDG 56
Query: 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVC 164
++ D S + ++V + + ++
Sbjct: 57 DMADACS---------------VQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGL 101
Query: 165 GVQAMLQLAREMKDLKAFVHVSTA--FTHCPRERIDEEFYPVPLKYENLIQLISETGDEE 222
GV +L+ R+ F ST+ F ER DE P + +L
Sbjct: 102 GVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVN 161
Query: 223 LSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLH------------THLINLNTVTDM 270
E G + N P+ + + V L N++ D
Sbjct: 162 YRESFGLHASS---GILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDW 218
Query: 271 VPVDLVVNSMISIAWS 286
V +M +
Sbjct: 219 GFAGDYVEAMWLMLQQ 234
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 42.4 bits (98), Expect = 2e-05
Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104
K + L G TG G+ +++++L P L + R + + L +L
Sbjct: 3 KRVLLAGATGLTGEHLLDRILSE-PTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDG 61
Query: 105 EVPDF 109
+
Sbjct: 62 SIDTA 66
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 41.4 bits (95), Expect = 5e-05
Identities = 12/56 (21%), Positives = 20/56 (35%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFW 100
T+ +TG +G G+ V +KL L+ + + I D D
Sbjct: 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDA 59
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 41.0 bits (94), Expect = 1e-04
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 41 FYRDKTIFLTGGTGFMGKTVVEKLLR 66
F++ K +F+TG TGF G + L
Sbjct: 5 FWQGKRVFVTGHTGFKGGWLSLWLQT 30
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 39.8 bits (92), Expect = 2e-04
Identities = 46/251 (18%), Positives = 70/251 (27%), Gaps = 35/251 (13%)
Query: 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRL---FWRLR 103
+ +TGG GF+G V +LL + I D L R
Sbjct: 3 LLVTGGAGFIGSHFVRQLL---------------AGAYPDVPADEVIVLDSLTYAGNRAN 47
Query: 104 AEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINV 163
D ++ V GD GL E V + + R + + NV
Sbjct: 48 LAPVDADPRLRFVHGDIRDAGLLARELRG---VDAIVHFAAESHVDRSIAGASVFTETNV 104
Query: 164 CGVQAMLQLAREMKDLKAFVHVS--TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDE 221
G Q +LQ A + + VHVS + E P + S+
Sbjct: 105 QGTQTLLQCAVDAGVGR-VVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVAR 163
Query: 222 ELSEMTPNRVHISGTGWIDNVYGPIG--------MLVGIATGVLHTHLINLNTVTDMVPV 273
V I+ N YGP + + G + V + V
Sbjct: 164 AYHRTYGLDVRITRCC---NNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHT 220
Query: 274 DLVVNSMISIA 284
D + +
Sbjct: 221 DDHCRGIALVL 231
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 39.2 bits (90), Expect = 4e-04
Identities = 28/175 (16%), Positives = 61/175 (34%), Gaps = 19/175 (10%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104
K +TG GF+G ++E LL+ + + + + + ++ ++ + +
Sbjct: 17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRN--LDEVRSLVSEKQWSNFKF 74
Query: 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVC 164
D R+ V V + R + N+
Sbjct: 75 IQGDIRNLDDCNNACAG--------------VDYVLHQAALGSVPRSINDPITSNATNID 120
Query: 165 GVQAMLQLAREMKDLKAFVHVSTAFTHC--PRERIDEEFYPVPLKYENLIQLISE 217
G ML AR+ K ++F + +++ T+ P E+ PL + + ++E
Sbjct: 121 GFLNMLIAARDAKV-QSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNE 174
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.1 bits (87), Expect = 5e-04
Identities = 24/177 (13%), Positives = 50/177 (28%), Gaps = 35/177 (19%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104
K I + G TG G T + + +++ + +LVR + A +
Sbjct: 4 KKIAIFGATGQTGLTTLAQAVQAG---YEVTVLVRDSSRLPSEGPRPAHVVVGDVLQ--- 57
Query: 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVC 164
D V + V T + +
Sbjct: 58 ------------------------AADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARN 93
Query: 165 GVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDE 221
V AM + + V ++AF ++ V + + +++ E+G +
Sbjct: 94 IVAAM-----KAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLK 145
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (88), Expect = 8e-04
Identities = 22/169 (13%), Positives = 46/169 (27%), Gaps = 23/169 (13%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKD---IQERLDAIFEDRLFWR 101
+TG TG G + E LL +KG + I R + R+
Sbjct: 2 NVALITGITGQDGSYLAEFLL---------------EKGYEVHGIVRRSSSFNTGRIEHL 46
Query: 102 LRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKI 161
+ + GD + + ++ + + + + +
Sbjct: 47 YKNPQAHIEGNMKLHYGDLTDSTCL-VKIINEVKPTEIYNLGAQSHVKISFDLAEYTADV 105
Query: 162 NVCGVQAMLQLARE--MKDLKAFVHVSTA--FTHCPRERIDEEFYPVPL 206
+ G +L + + + F ST+ + E P
Sbjct: 106 DGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPR 154
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 37.6 bits (86), Expect = 0.001
Identities = 16/166 (9%), Positives = 50/166 (30%), Gaps = 53/166 (31%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDI--QERLDAIFEDRLFWRL 102
+ +F+ G G +G + +L + + L++R + ++ + F
Sbjct: 3 QRVFIAGHRGMVGSAIRRQLEQR----GDVELVLRTRDELNLLDSRAVHDFFAS------ 52
Query: 103 RAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATV----RFDEHIKMA 158
++++ V+ AA V + +
Sbjct: 53 ----------------------------------ERIDQVYLAAAKVGGIVANNTYPADF 78
Query: 159 VKINVCGVQAMLQLAREMKDLKAFVHVST--AFTHCPRERIDEEFY 202
+ N+ ++ A + D+ + + + + ++ + E
Sbjct: 79 IYQNMMIESNIIHAAHQ-NDVNKLLFLGSSCIYPKLAKQPMAESEL 123
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 36.3 bits (82), Expect = 0.003
Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDR 97
I L G TG++G+ V + L +LLVR E+ + +
Sbjct: 4 SRILLIGATGYIGRHVAKASLDLG---HPTFLLVRESTASSNSEKAQLLESFK 53
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 36.1 bits (82), Expect = 0.004
Identities = 37/210 (17%), Positives = 64/210 (30%), Gaps = 21/210 (10%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFW---- 100
K I +TGG GF+G V + + P + L G + L+AI DR+
Sbjct: 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN--KANLEAILGDRVELVVGD 60
Query: 101 -RLRAEVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAV 159
V +K A+ + S D + + N + ++
Sbjct: 61 IADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFI-HTNFIGTYTLLEAARKYDIRFH 119
Query: 160 KINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETG 219
++ V L L ++ P E+ E P + + S+
Sbjct: 120 HVSTDEVYGDLPLREDLPG----------HGEGPGEKFTAETNYNPSSPYSSTKAASDLI 169
Query: 220 DEELSEMTPNRVHISGTGWIDNVYGPIGML 249
+ + IS N YGP +
Sbjct: 170 VKAWVRSFGVKATISNCS---NNYGPYQHI 196
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 36.2 bits (82), Expect = 0.004
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRS 67
KTI + G TG G +++
Sbjct: 4 KTIAVVGATGRQGASLIRVAAAV 26
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 35.8 bits (81), Expect = 0.004
Identities = 26/158 (16%), Positives = 51/158 (32%), Gaps = 23/158 (14%)
Query: 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104
K + +TGG G++G V +L+ + G D D + R
Sbjct: 2 KIVLVTGGAGYIGSHTVVELI---------------ENGYDCV-VADNLSNSTYDSVARL 45
Query: 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVC 164
EV + + D ++ +++ V H A E ++ ++
Sbjct: 46 EVLT-KHHIPFYEVDLCDR----KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHN 100
Query: 165 GVQAMLQLAREMKD--LKAFVHVSTAFTHCPRERIDEE 200
+ + L M+ + FV S+A + R
Sbjct: 101 NILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNM 138
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 303 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.96 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.95 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.95 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.95 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.95 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.95 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.94 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.94 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.94 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.94 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.94 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.94 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.93 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.93 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.92 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.92 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.92 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.91 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.91 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.91 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.91 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.9 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.85 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.84 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.84 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.83 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.83 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.8 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.8 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.79 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.79 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.79 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.79 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.79 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.78 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.77 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.77 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.77 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.77 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.77 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.77 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.77 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.76 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.76 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.76 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.76 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.75 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.75 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.75 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.75 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.75 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.74 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.74 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.74 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.74 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.73 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.73 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.73 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.73 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.73 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.72 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.72 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.72 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.72 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.71 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.71 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.7 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.7 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.69 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.69 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.69 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.69 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.68 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.67 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.67 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.66 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.64 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.64 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.63 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.63 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.63 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.62 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.59 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.59 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.58 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.58 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.58 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.57 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.49 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.42 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.38 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.37 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.33 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.29 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.22 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.21 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.07 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 98.1 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.08 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.07 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 98.0 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.82 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.76 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.74 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.72 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.68 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.65 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.57 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.57 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.55 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.54 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.51 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.45 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.34 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.34 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.32 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.31 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.3 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.26 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.22 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.22 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.16 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.15 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.14 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.04 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.0 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.98 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.88 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.84 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 96.82 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 96.74 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 96.73 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 96.66 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 96.52 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 96.46 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.4 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.3 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.29 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.27 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 96.14 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.08 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.06 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 96.06 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 96.05 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 95.99 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 95.99 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 95.86 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 95.77 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 95.72 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 95.71 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 95.63 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 95.51 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 95.5 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 95.25 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 95.24 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 95.18 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 95.13 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 95.12 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 95.11 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 95.1 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 95.09 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.07 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 95.02 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 95.01 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 95.01 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 94.93 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 94.88 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 94.85 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 94.83 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 94.81 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 94.71 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 94.7 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 94.67 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 94.53 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 94.44 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 94.43 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 94.4 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 94.38 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 94.35 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 94.35 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 94.35 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 94.33 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 94.26 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 94.14 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 94.12 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 94.06 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 94.0 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 93.87 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 93.85 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 93.78 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 93.72 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 93.71 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 93.58 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 93.36 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 93.35 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 93.31 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 92.98 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 92.93 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 92.88 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 92.85 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 92.71 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 92.39 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 92.37 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 92.24 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 92.18 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 92.16 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 92.08 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 92.04 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 91.97 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 91.87 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 91.86 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 91.84 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 91.61 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 91.6 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 91.56 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 91.54 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 91.46 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 91.42 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 91.33 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 91.31 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 91.14 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 91.01 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 91.01 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 90.95 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 90.83 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 90.5 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 90.33 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 90.3 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 90.2 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 89.91 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 89.67 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 89.46 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 89.44 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 89.39 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 89.35 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 89.04 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 88.91 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 88.86 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 88.55 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 88.45 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 88.06 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 87.56 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 87.36 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 87.3 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 87.18 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 87.1 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 86.72 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 86.62 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 86.42 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 86.38 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 86.35 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 86.27 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 86.27 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 86.15 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 86.07 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 85.16 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 85.0 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 84.62 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 83.96 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 83.77 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 83.2 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 83.0 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 83.0 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 82.67 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 82.43 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 82.4 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 81.88 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 81.25 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 81.0 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 80.92 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 80.58 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=4.3e-29 Score=224.40 Aligned_cols=218 Identities=18% Similarity=0.120 Sum_probs=156.2
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|||||||||||++|+++|++.|++ |++++|..+... ..+++.+... ......+++++++|++|..
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~---V~~~~r~~~~~~-~~~~~~~~~~---------~~~~~~~~~~~~~Dl~d~~ 68 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYE---VHGIKRRASSFN-TERVDHIYQD---------PHTCNPKFHLHYGDLSDTS 68 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEECC-------------------------------CCEEECCCCSSCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCE---EEEEECCCcccc-hhhHHHHHhh---------hhhcCCCeEEEEeecCCHH
Confidence 78999999999999999999999998 999999654221 1122221111 1112368999999999877
Q ss_pred CCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEeCC--cccCCCC
Q psy17679 125 LGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMK--DLKAFVHVSTA--FTHCPRE 195 (303)
Q Consensus 125 ~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~--~~~r~i~iSS~--~~~~~~~ 195 (303)
++.++++ ++|+|+|+|+.... ..++...+++|+.|+.+|+++|+..+ +++||||+||+ |+.....
T Consensus 69 ------~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~ 142 (357)
T d1db3a_ 69 ------NLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEI 142 (357)
T ss_dssp ------HHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSS
T ss_pred ------HHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCC
Confidence 7888887 56999999998653 34567788999999999999999862 34589999998 4544556
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH-----------HHHHHHHhhhh-hhc
Q psy17679 196 RIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI-----------GMLVGIATGVL-HTH 260 (303)
Q Consensus 196 ~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~-----------~~~~~~~~~~~-~~~ 260 (303)
+++|++...|. +.|..+|..+|.+++.+...+. +++||+ ++|||. ..+.....+.. ...
T Consensus 143 ~~~E~~~~~P~---~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~---~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~ 216 (357)
T d1db3a_ 143 PQKETTPFYPR---SPYAVAKLYAYWITVNYRESYGMYACNGILF---NHESPRRGETFVTRKITRAIANIAQGLESCLY 216 (357)
T ss_dssp SBCTTSCCCCC---SHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC---CEECTTSCTTSHHHHHHHHHHHHHTTSCCCEE
T ss_pred CcCCCCCCCCC---ChHHHHHHHHHHHHHHHHHHhCCCEEEEEec---cccCCCCCcCCCchHHHHHHHHHHhCCCceEE
Confidence 78888755554 4577888899999998876544 677764 566653 12233333333 335
Q ss_pred cCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 261 LINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 261 ~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+|.+.+.++|+|++|+|++++.++.+.
T Consensus 217 ~g~~~~~r~~~~v~D~~~a~~~~~~~~ 243 (357)
T d1db3a_ 217 LGNMDSLRDWGHAKDYVKMQWMMLQQE 243 (357)
T ss_dssp ESCTTCEECCEEHHHHHHHHHHTTSSS
T ss_pred ECCCCeeecceeechHHHHHHHHHhCC
Confidence 678899999999999999999988764
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.95 E-value=8.8e-29 Score=222.69 Aligned_cols=219 Identities=16% Similarity=0.168 Sum_probs=159.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||||||||||||++|+++|++.|+++ |.++++.+.... ...+.. .....+++++.+|+++..
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~v--v~~~d~~~~~~~-~~~~~~--------------~~~~~~~~~~~~Dl~d~~ 63 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDT--VVNIDKLTYAGN-LESLSD--------------ISESNRYNFEHADICDSA 63 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCE--EEEEECCCTTCC-GGGGTT--------------TTTCTTEEEEECCTTCHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCE--EEEEeCCCcccc-HHHHHh--------------hhhcCCcEEEEccCCCHH
Confidence 689999999999999999999999873 555554322111 111110 112368999999999976
Q ss_pred CCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcC--------CCceEEEEeCCccc
Q psy17679 125 LGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMK--------DLKAFVHVSTAFTH 191 (303)
Q Consensus 125 ~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~--------~~~r~i~iSS~~~~ 191 (303)
.+..+++ ++|+|||+|+.... ..++..++++|+.++.+++++|.+.+ ++++|||+||..++
T Consensus 64 ------~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vy 137 (361)
T d1kewa_ 64 ------EITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVY 137 (361)
T ss_dssp ------HHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGG
T ss_pred ------HHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceee
Confidence 6777776 68999999997653 23456788999999999999998751 34699999999554
Q ss_pred CC--CCccccCC-------CCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH--------HHHHH
Q psy17679 192 CP--RERIDEEF-------YPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI--------GMLVG 251 (303)
Q Consensus 192 ~~--~~~~~E~~-------~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~--------~~~~~ 251 (303)
+. ..+..|.. ...+..|...|..+|.++|.+++.+...+. +++||+ ++|||. .++..
T Consensus 138 g~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~---~vyGp~~~~~~~i~~~i~~ 214 (361)
T d1kewa_ 138 GDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCS---NNYGPYHFPEKLIPLVILN 214 (361)
T ss_dssp CCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC---EEESTTCCTTSHHHHHHHH
T ss_pred CCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecC---ceECcCCCcCcHHHHHHHH
Confidence 32 22222211 123445667788899999999998876654 677764 556654 35555
Q ss_pred HHhhhhhhccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 252 IATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
+..|....++++|.+.++|+|++|+|+++..++.++..
T Consensus 215 ~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~~ 252 (361)
T d1kewa_ 215 ALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKA 252 (361)
T ss_dssp HHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT
T ss_pred HHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCCC
Confidence 66777777889999999999999999999999987654
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=9.9e-29 Score=218.03 Aligned_cols=209 Identities=18% Similarity=0.199 Sum_probs=154.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|||||||||||+|++|+++|+++|++ |++++|..+... +.+ ... ....++.....|+.+.
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~---V~~~d~~~~~~~--~~~------------~~~--~~~~~~d~~~~~~~~~ 61 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHE---VTVVDNFFTGRK--RNV------------EHW--IGHENFELINHDVVEP 61 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCG--GGT------------GGG--TTCTTEEEEECCTTSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCE---EEEEeCCCcCCH--HHH------------HHh--cCCCceEEEehHHHHH
Confidence 489999999999999999999999998 888887432211 000 000 0123455555555443
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCccc--CCCCccc
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTH--CPRERID 198 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~--~~~~~~~ 198 (303)
++.++|+|||+|+.... ..+....+++|+.++.+++++++.. ++ |+||+||..++ ....++.
T Consensus 62 -----------~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~SS~~vy~~~~~~~~~ 128 (312)
T d2b69a1 62 -----------LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGDPEVHPQS 128 (312)
T ss_dssp -----------CCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBSCSSSSBC
T ss_pred -----------HHcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEEChheecCCCCCCCC
Confidence 34579999999997653 3456778899999999999999997 65 89999999444 3444666
Q ss_pred cCCC--CCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH----------HHHHHHHhhhhhhccCC
Q psy17679 199 EEFY--PVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI----------GMLVGIATGVLHTHLIN 263 (303)
Q Consensus 199 E~~~--~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~----------~~~~~~~~~~~~~~~~~ 263 (303)
|+.. ..|..|...|..+|..+|.+++.++..++ +++||+ ++|||. .++..+..|....++++
T Consensus 129 e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~---~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~ 205 (312)
T d2b69a1 129 EDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIF---NTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS 205 (312)
T ss_dssp TTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC---CEECTTCCTTCCCHHHHHHHHHHHTCCEEEESS
T ss_pred ccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHhCCcEEEEEee---eEECCCCCCCCccHHHHHHHHHHcCCCeEEeCC
Confidence 6543 24667788899999999999998876654 677764 556654 35566677777778899
Q ss_pred CCccccceehhHHHHHHHHHHhhc
Q psy17679 264 LNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 264 ~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
+.+.++|+|++|+|++++.+++..
T Consensus 206 g~~~r~~i~v~D~~~~~~~~~~~~ 229 (312)
T d2b69a1 206 GSQTRAFQYVSDLVNGLVALMNSN 229 (312)
T ss_dssp SCCEEECEEHHHHHHHHHHHHTSS
T ss_pred CCeeEccEEHHHHHHHHHHHHhhc
Confidence 999999999999999999888654
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.95 E-value=2.2e-27 Score=210.01 Aligned_cols=218 Identities=21% Similarity=0.169 Sum_probs=164.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCcc---EEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLK---HIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~---~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|||||||||||||++|++.|+++|+++. +|+.+++....... ..+ . ......++.++.+|+.
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~-~~~------------~--~~~~~~~~~~~~~d~~ 65 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR-ANL------------A--PVDADPRLRFVHGDIR 65 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG-GGG------------G--GGTTCTTEEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH-hHh------------h--hhhcCCCeEEEEeccc
Confidence 6899999999999999999999998753 45666554321110 000 0 0122368999999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcc--cCCCCc
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFT--HCPRER 196 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~--~~~~~~ 196 (303)
+.. ........+|+|+|+|+.... ..+....+++|+.++.+++++|.+. ++++|||+||+.+ .....+
T Consensus 66 ~~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~Ss~~~yg~~~~~~ 138 (322)
T d1r6da_ 66 DAG------LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGSIDSGS 138 (322)
T ss_dssp CHH------HHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGCCCSSSC
T ss_pred cch------hhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEeecceeecCCCCCC
Confidence 866 566777899999999987543 3445677889999999999999998 8899999999944 445557
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH--------HHHHHHHhhhhhhccCCCC
Q psy17679 197 IDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI--------GMLVGIATGVLHTHLINLN 265 (303)
Q Consensus 197 ~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~--------~~~~~~~~~~~~~~~~~~~ 265 (303)
++|+....|.+ .|..+|..+|.+++.+...+. +++||+ ++|||. .++.++..+....++++|.
T Consensus 139 ~~E~~~~~p~~---~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~---~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~ 212 (322)
T d1r6da_ 139 WTESSPLEPNS---PYAASKAGSDLVARAYHRTYGLDVRITRCC---NNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGA 212 (322)
T ss_dssp BCTTSCCCCCS---HHHHHHHHHHHHHHHHHHHHCCCEEEEEEC---EEECTTCCTTSHHHHHHHHHHTTCCEEEETTSC
T ss_pred CCCCCCCCCCC---HHHHHHHHHHHHHHHHHHHhCCCEEEEEee---eEECcCCCcCcHHHHHHHHHHcCCCcEEecCCC
Confidence 88887666655 466777889999988876543 677764 456654 2445566677777889999
Q ss_pred ccccceehhHHHHHHHHHHhhcccC
Q psy17679 266 TVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 266 ~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
+.++|+|++|+|+++..++.++...
T Consensus 213 ~~r~~i~v~D~a~ai~~~~~~~~~~ 237 (322)
T d1r6da_ 213 NVREWVHTDDHCRGIALVLAGGRAG 237 (322)
T ss_dssp CEEEEEEHHHHHHHHHHHHHHCCTT
T ss_pred eEEccEEHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999987643
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.95 E-value=4.2e-27 Score=209.74 Aligned_cols=221 Identities=18% Similarity=0.127 Sum_probs=168.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc-cHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK-DIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~-~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
.+++|+|||||||||||++|+++|++.|++ |++++|..... ...+.+..+.... ...+++++.+|
T Consensus 13 ~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~---V~~~d~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~d 78 (341)
T d1sb8a_ 13 PAQPKVWLITGVAGFIGSNLLETLLKLDQK---VVGLDNFATGHQRNLDEVRSLVSEK-----------QWSNFKFIQGD 78 (341)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCHHHHHHHHHHSCHH-----------HHTTEEEEECC
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCE---EEEEECCCCcchhhHHHHHHhhhhc-----------ccCCeeEEeec
Confidence 356689999999999999999999999998 88988754322 2222222221111 12688999999
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC--cccCCC
Q psy17679 120 CSLPGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA--FTHCPR 194 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~--~~~~~~ 194 (303)
+.|.. ........+++|+|+++.... ..+....+++|+.|+.+++++|... ++++|||+||. |+....
T Consensus 79 ~~d~~------~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~SS~~vyg~~~~ 151 (341)
T d1sb8a_ 79 IRNLD------DCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPG 151 (341)
T ss_dssp TTSHH------HHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCC
T ss_pred ccccc------ccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEcccceeeCCCCC
Confidence 99866 567777799999999987653 4455678899999999999999998 88999999999 554555
Q ss_pred CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH------------HHHHHHHhhhhhh
Q psy17679 195 ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI------------GMLVGIATGVLHT 259 (303)
Q Consensus 195 ~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~------------~~~~~~~~~~~~~ 259 (303)
.+++|+....|.+ .|..+|..+|.++..+...+. +++||+ ++||+. .++..+..|.+..
T Consensus 152 ~~~~E~~~~~p~~---~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~---~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~ 225 (341)
T d1sb8a_ 152 LPKVEDTIGKPLS---PYAVTKYVNELYADVFSRCYGFSTIGLRYF---NVFGRRQDPNGAYAAVIPKWTSSMIQGDDVY 225 (341)
T ss_dssp SSBCTTCCCCCCS---HHHHHHHHHHHHHHHHHHHHCCCCEEEEEC---CEECTTCCCCSTTCCHHHHHHHHHHHTCCCE
T ss_pred CCccCCCCCCCCC---cchHHHHHHHHHHHHHHHHhCCCeEEEEec---eeeccCcCCCCchhhhHHHHHHHHHcCCceE
Confidence 6788887665554 567788889999987765543 788875 444432 2445667777778
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
++++|.+.++|+|++|+|.++..++..+.
T Consensus 226 ~~g~g~~~r~~i~v~D~~~a~~~~~~~~~ 254 (341)
T d1sb8a_ 226 INGDGETSRDFCYIENTVQANLLAATAGL 254 (341)
T ss_dssp EESSSCCEECCEEHHHHHHHHHHHHTCCG
T ss_pred EcCCCCEEEEEEEEeccchhhhhhhhccc
Confidence 88899999999999999999999887653
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=5.2e-27 Score=209.28 Aligned_cols=220 Identities=13% Similarity=0.064 Sum_probs=155.9
Q ss_pred cEE-EEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 45 KTI-FLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 45 ~~v-lItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
||| ||||||||||++|++.|+++|++ |++++|.++.... .+++.+.. ........+++++.+|++|.
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~---V~~i~r~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~Dl~d~ 68 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYE---VHGIVRRSSSFNT-GRIEHLYK--------NPQAHIEGNMKLHYGDLTDS 68 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCCC-TTTGGGC-----------------CEEEEECCTTCH
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCE---EEEEECCCcccch-hhHHHHhh--------chhhhccCCcEEEEeecCCc
Confidence 567 99999999999999999999998 9999997542210 01100000 00011125789999999997
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEeCC--cccCCC
Q psy17679 124 GLGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMK--DLKAFVHVSTA--FTHCPR 194 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~--~~~r~i~iSS~--~~~~~~ 194 (303)
. .+..++. ++++|+|+++.... ..+...++++|+.++.++++++++.+ +.++|||+||+ |+....
T Consensus 69 ~------~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~ 142 (347)
T d1t2aa_ 69 T------CLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQE 142 (347)
T ss_dssp H------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSS
T ss_pred h------hhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCC
Confidence 7 6777775 67899999997654 34456678999999999999999872 33589999998 444445
Q ss_pred CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH--------H----HHHHHHhhhhhh
Q psy17679 195 ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI--------G----MLVGIATGVLHT 259 (303)
Q Consensus 195 ~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~--------~----~~~~~~~~~~~~ 259 (303)
.+++|++...|.+ .|..+|..+|++++.+...+. +++|| +++|||. . +...........
T Consensus 143 ~~~~E~~~~~P~~---~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~---~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~ 216 (347)
T d1t2aa_ 143 IPQKETTPFYPRS---PYGAAKLYAYWIVVNFREAYNLFAVNGIL---FNHESPRRGANFVTRKISRSVAKIYLGQLECF 216 (347)
T ss_dssp SSBCTTSCCCCCS---HHHHHHHHHHHHHHHHHHHHCCEEEEEEE---CCEECTTSCTTSHHHHHHHHHHHHHHTSCSCE
T ss_pred CCCCCCCCCCCCC---HHHHHHHHHHHHHHHHHHHhCCCEEEEEe---cceeCCCCCCCccccccceeeehhhcCCccee
Confidence 5788887666655 566778889999988765544 56665 4566653 1 112222233445
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.++++.+.++|+|++|+|+++..++.+..
T Consensus 217 ~~g~g~~~r~~i~v~D~~~a~~~~~~~~~ 245 (347)
T d1t2aa_ 217 SLGNLDAKRDWGHAKDYVEAMWLMLQNDE 245 (347)
T ss_dssp EESCTTCEECCEEHHHHHHHHHHHHHSSS
T ss_pred ecCCCcceeeeeEecHHHHHHHHHhhcCC
Confidence 67888999999999999999999998754
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.94 E-value=9.6e-27 Score=209.07 Aligned_cols=212 Identities=16% Similarity=0.081 Sum_probs=157.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
.+.|||||||||||||++|++.|+++|++ |++++|.+.... ........+..+|+.
T Consensus 13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~---V~~~d~~~~~~~---------------------~~~~~~~~~~~~D~~ 68 (363)
T d2c5aa1 13 SENLKISITGAGGFIASHIARRLKHEGHY---VIASDWKKNEHM---------------------TEDMFCDEFHLVDLR 68 (363)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCSSS---------------------CGGGTCSEEEECCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCE---EEEEeCCCccch---------------------hhhcccCcEEEeech
Confidence 35789999999999999999999999997 888887654221 011246678999998
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc----cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF----DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRE 195 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~----~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~ 195 (303)
+.. .+..+++++|+|||+|+.... .......+..|+.++.++++++... +++|||++||..... ...
T Consensus 69 ~~~------~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~-~vk~~i~~SS~~~~~~~~~~ 141 (363)
T d2c5aa1 69 VME------NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIYPEFKQL 141 (363)
T ss_dssp SHH------HHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGSCGGGSS
T ss_pred hHH------HHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhh-Cccccccccccccccccccc
Confidence 876 677888899999999987654 4556678889999999999999998 999999999994443 222
Q ss_pred ccccCC----CCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH-------------HHHHHHhh
Q psy17679 196 RIDEEF----YPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG-------------MLVGIATG 255 (303)
Q Consensus 196 ~~~E~~----~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~-------------~~~~~~~~ 255 (303)
+..|.. ...|..|...|..+|.++|.+++.+...++ +++|| +++||+.. ........
T Consensus 142 ~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~---~~vyG~~~~~~~~~~~~~~~~~~~~~~~~ 218 (363)
T d2c5aa1 142 ETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRF---HNIYGPFGTWKGGREKAPAAFCRKAQTST 218 (363)
T ss_dssp SSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE---CCEECTTSCCSSSCCCHHHHHHHHHHHCS
T ss_pred cccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEe---eeEeccCCccccccccccccccccccccc
Confidence 333321 123445566777888999999998876644 67766 45666541 11222223
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.....+++|.+.++|+|++|+|+++..++..+
T Consensus 219 ~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~ 250 (363)
T d2c5aa1 219 DRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD 250 (363)
T ss_dssp SCEEEESCSCCEECCEEHHHHHHHHHHHHHSS
T ss_pred ccccccCCCCeEEEEeehhHHHHHHHHHHhCC
Confidence 33456788889999999999999999988754
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.94 E-value=1.8e-26 Score=203.64 Aligned_cols=215 Identities=19% Similarity=0.099 Sum_probs=157.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|||||||||||++|++.|+++||+ |++++|..+... ..+++.+. ..++++++.+|+.|..
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~---V~~~~r~~~~~~-~~~l~~~~--------------~~~~~~~~~~Dl~d~~ 62 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYR---VHGLVARRSSDT-RWRLRELG--------------IEGDIQYEDGDMADAC 62 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCC-CHHHHHTT--------------CGGGEEEEECCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCE---EEEEECCCCccc-HHHHHHhc--------------ccCCcEEEEccccChH
Confidence 68999999999999999999999998 999999764332 23332221 1268999999999976
Q ss_pred CCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC--cccCCCCcc
Q psy17679 125 LGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA--FTHCPRERI 197 (303)
Q Consensus 125 ~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~--~~~~~~~~~ 197 (303)
.+.+.+. .+++++|+|+.... ..+....+..|+.++.++++++.+.+..++|+++||. |+.......
T Consensus 63 ------~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~ 136 (321)
T d1rpna_ 63 ------SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQ 136 (321)
T ss_dssp ------HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSB
T ss_pred ------HhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCC
Confidence 5666665 57789999887543 3445678899999999999999998445678888888 444445566
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH-----------HHHHHHhhh-hhhccC
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG-----------MLVGIATGV-LHTHLI 262 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~-----------~~~~~~~~~-~~~~~~ 262 (303)
+|+.+..|.+ .|..+|.++|.++..+...+. +++|| +++|||.. .+.+...+. ....++
T Consensus 137 ~E~~~~~p~~---~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~---~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g 210 (321)
T d1rpna_ 137 DENTPFYPRS---PYGVAKLYGHWITVNYRESFGLHASSGIL---FNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLG 210 (321)
T ss_dssp CTTSCCCCCS---HHHHHHHHHHHHHHHHHHHHCCCEEEEEE---CCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEES
T ss_pred CCCCCccccC---hhHHHHHHHHHHHHHHHhhcCCcEEEEEE---ecccCCCccccccHHHHHHHHHHHHhCCCCcEEEC
Confidence 6766555554 566777889999988765544 66666 45666531 222223333 333478
Q ss_pred CCCccccceehhHHHHHHHHHHhhccc
Q psy17679 263 NLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 263 ~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
++++.++|+|++|+|++++.++.++..
T Consensus 211 ~g~~~r~~i~v~D~~~~~~~~~~~~~~ 237 (321)
T d1rpna_ 211 NVDAKRDWGFAGDYVEAMWLMLQQDKA 237 (321)
T ss_dssp CTTCEEECEEHHHHHHHHHHHHHSSSC
T ss_pred CCCeEEccEEeHHHHHHHHHHHhcCCc
Confidence 889999999999999999999987643
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.94 E-value=1.5e-26 Score=210.12 Aligned_cols=225 Identities=15% Similarity=0.105 Sum_probs=156.4
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC-------------C-CCcccHHHHHHHHHHhHHHhhhhccCcCc
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR-------------P-KKGKDIQERLDAIFEDRLFWRLRAEVPDF 109 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R-------------~-~~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 109 (303)
+|||||||||||||++|+++|++.||+ |++++. + .......+.+..+.. ..
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~---V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 65 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYE---VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA------------LT 65 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHH------------HH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCE---EEEEecCCcccccccccccccccccchHHHHHHHHh------------hc
Confidence 589999999999999999999999998 777641 0 111112222221111 11
Q ss_pred CCceEEEEecCCCCCCCCCHHHHHHHhc--cccEEEEcceecccc------ccHHHHHhhhHHHHHHHHHHHHhcCCCce
Q psy17679 110 RSKVSAVAGDCSLPGLGLSETDRATLVK--QVNIVFHGAATVRFD------EHIKMAVKINVCGVQAMLQLAREMKDLKA 181 (303)
Q Consensus 110 ~~~v~~~~~Dl~d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~~------~~~~~~~~~N~~~~~~ll~~a~~~~~~~r 181 (303)
..+++++++|++|.+ .+..+++ ++|+|+|+|+..... .....++++|+.++.+++++|++.+..++
T Consensus 66 ~~~i~~~~~Dl~d~~------~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~ 139 (393)
T d1i24a_ 66 GKSIELYVGDICDFE------FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECH 139 (393)
T ss_dssp CCCCEEEESCTTSHH------HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred CCCcEEEEccCCCHH------HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccc
Confidence 268999999999977 6888887 679999999975431 22346788999999999999999833446
Q ss_pred EEEEeCCcccCCC-Cccc-------cC----CCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccCh-
Q psy17679 182 FVHVSTAFTHCPR-ERID-------EE----FYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGP- 245 (303)
Q Consensus 182 ~i~iSS~~~~~~~-~~~~-------E~----~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~- 245 (303)
++++||....... .+.. ++ ....|..|...|..+|..+|.++..+...+. .++||+ ++|||
T Consensus 140 ~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~---~v~G~~ 216 (393)
T d1i24a_ 140 LVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQG---VVYGVK 216 (393)
T ss_dssp EEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC---EEECSC
T ss_pred eeeccccccccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccc---cccCCC
Confidence 6777776332211 1111 11 1123455666788999999999987766544 566664 33432
Q ss_pred ------------------------HHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcccCCc
Q psy17679 246 ------------------------IGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGESGK 292 (303)
Q Consensus 246 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~ 292 (303)
..+......+.+..++|++.+.+||+|++|+|++++.++.++...+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~ 287 (393)
T d1i24a_ 217 TDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGE 287 (393)
T ss_dssp CTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTC
T ss_pred ccccccccccccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccce
Confidence 13445566677778889999999999999999999999987765544
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=4.7e-26 Score=202.76 Aligned_cols=219 Identities=15% Similarity=0.146 Sum_probs=150.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc-cHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK-DIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~-~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
|||||||||||||++|++.|+++|++ |++++|..... ......+.+. ..++.++++|++|.
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~---V~~~d~~~~~~~~~~~~~~~~~---------------~~~~~~~~~Dl~d~ 62 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHD---VIILDNLCNSKRSVLPVIERLG---------------GKHPTFVEGDIRNE 62 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCTTHHHHHHHHH---------------TSCCEEEECCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCE---EEEEECCCCcchhhHHHHHhhc---------------CCCCEEEEeecCCH
Confidence 67999999999999999999999988 88888754322 2222222211 26899999999997
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcceecccc---ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC--CCCc
Q psy17679 124 GLGLSETDRATLVK--QVNIVFHGAATVRFD---EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC--PRER 196 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--~~dvVi~~a~~~~~~---~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~--~~~~ 196 (303)
+ .+.++++ ++|+|||+||..... .+....+++|+.++.+++++|+.. ++++||++||..+.. ...+
T Consensus 63 ~------~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~Ss~~vy~~~~~~~ 135 (338)
T d1udca_ 63 A------LMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGDQPKIP 135 (338)
T ss_dssp H------HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCCSSS
T ss_pred H------HHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEecCcceEEccccccc
Confidence 7 7888887 799999999976532 355688999999999999999999 899999999995443 3333
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC-c---EEeecceecCcc-----Ch------HHHHHH---HHhh--h
Q psy17679 197 IDEEFYPVPLKYENLIQLISETGDEELSEMTPNR-V---HISGTGWIDNVY-----GP------IGMLVG---IATG--V 256 (303)
Q Consensus 197 ~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~-~---~ii~pg~~~~~~-----g~------~~~~~~---~~~~--~ 256 (303)
..|.. .+..+...|..+|..+|.++....... . +++||+.+.+.. |+ ..++.. ...+ .
T Consensus 136 ~~e~~--~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 213 (338)
T d1udca_ 136 YVESF--PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRD 213 (338)
T ss_dssp BCTTS--CCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSS
T ss_pred ccccc--ccCCCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCC
Confidence 43332 223344556677788888887544332 2 667765443221 11 112222 2222 2
Q ss_pred hhhccC------CCCccccceehhHHHHHHHHHHhhcccC
Q psy17679 257 LHTHLI------NLNTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 257 ~~~~~~------~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
+..++| ++.+.+||+|++|++.++..++......
T Consensus 214 ~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~ 253 (338)
T d1udca_ 214 SLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANK 253 (338)
T ss_dssp CEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTC
T ss_pred CEEEeCCCcccCCCCceeeEEEEeehhhhccccccccccc
Confidence 223333 3677899999999999998887755443
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=4.2e-26 Score=203.15 Aligned_cols=214 Identities=13% Similarity=0.108 Sum_probs=156.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||||||||||||++|+++|+++|+. .|+++++.+...... ...++++++++|+++..
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~--~V~~ld~~~~~~~~~--------------------~~~~~~~~i~~Di~~~~ 58 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHY--EVYGLDIGSDAISRF--------------------LNHPHFHFVEGDISIHS 58 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTC--EEEEEESCCGGGGGG--------------------TTCTTEEEEECCTTTCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCC--EEEEEeCCCcchhhh--------------------ccCCCeEEEECccCChH
Confidence 68999999999999999999999852 388988865322100 11368999999999876
Q ss_pred CCCCHHHHH-HHhccccEEEEcceecccc---ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC--cccCCCCccc
Q psy17679 125 LGLSETDRA-TLVKQVNIVFHGAATVRFD---EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA--FTHCPRERID 198 (303)
Q Consensus 125 ~~~~~~~~~-~~~~~~dvVi~~a~~~~~~---~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~--~~~~~~~~~~ 198 (303)
++. .+.+++|+|||+|+..... .+....+.+|+.++.++++++.+. ++ +++++||. |+........
T Consensus 59 ------~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~-~~~~~ss~~~~~~~~~~~~~ 130 (342)
T d2blla1 59 ------EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-RK-RIIFPSTSEVYGMCSDKYFD 130 (342)
T ss_dssp ------HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEECCGGGGBTCCCSSBC
T ss_pred ------HHHHHHHhCCCccccccccccccccccCCccccccccccccccccccccc-cc-cccccccccccccccccccc
Confidence 444 4667899999999986543 334577899999999999999997 55 55677777 4444333344
Q ss_pred cCCC----CCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecC-----ccCh--------HHHHHHHHhhhhh
Q psy17679 199 EEFY----PVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDN-----VYGP--------IGMLVGIATGVLH 258 (303)
Q Consensus 199 E~~~----~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~-----~~g~--------~~~~~~~~~~~~~ 258 (303)
|... ..+..|...|..+|..+|.++..+.+.++ ++++|..+.+ .+++ ..++.++..|...
T Consensus 131 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 210 (342)
T d2blla1 131 EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPI 210 (342)
T ss_dssp TTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCE
T ss_pred cccccccccccCCCcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCc
Confidence 3321 23345778899999999999998876544 5565432221 1111 1355667778877
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.++++|.+.++|+|++|+|+++..++.++.
T Consensus 211 ~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~ 240 (342)
T d2blla1 211 KLIDGGKQKRCFTDIRDGIEALYRIIENAG 240 (342)
T ss_dssp EEGGGSCCEEECEEHHHHHHHHHHHHHCGG
T ss_pred cccCCCCeeeeecccccccceeeeehhhcc
Confidence 888999999999999999999999998764
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.94 E-value=9.3e-26 Score=201.40 Aligned_cols=219 Identities=21% Similarity=0.222 Sum_probs=158.8
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|||||||||||||++|++.|++.|+++. |+++++.+.... ...+ ......+++++.+|+.|
T Consensus 1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~-v~~~d~~~~~~~-~~~~---------------~~~~~~~i~~~~~Di~d 63 (346)
T d1oc2a_ 1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVH-VTVLDKLTYAGN-KANL---------------EAILGDRVELVVGDIAD 63 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHCTTCE-EEEEECCCTTCC-GGGT---------------GGGCSSSEEEEECCTTC
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHCCCCeE-EEEEeCCCcccc-HHHH---------------HHhhcCCeEEEEccCCC
Confidence 578999999999999999999999999843 444443221110 0000 00112689999999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC------
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP------ 193 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~------ 193 (303)
.+ .+..++...+.|+|+|+.... ..++...+++|+.++.++++++... + .++|++||+.+.+.
T Consensus 64 ~~------~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-~-~k~i~~ss~~vyg~~~~~~~ 135 (346)
T d1oc2a_ 64 AE------LVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-D-IRFHHVSTDEVYGDLPLRED 135 (346)
T ss_dssp HH------HHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-T-CEEEEEEEGGGGCCBCCGGG
T ss_pred HH------HHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccc-c-ccccccccceEecccCcccc
Confidence 76 788999999999999997653 2445678899999999999999997 5 47888888843321
Q ss_pred --------CCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH--------HHHHHHHh
Q psy17679 194 --------RERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI--------GMLVGIAT 254 (303)
Q Consensus 194 --------~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~--------~~~~~~~~ 254 (303)
....+|. .+..|.+.|..+|.++|.+++.+...+. +++|| +++|||. ..+.....
T Consensus 136 ~~~~~~~~~~~~~e~---~~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~---~~vyGp~~~~~~~~~~~i~~~~~ 209 (346)
T d1oc2a_ 136 LPGHGEGPGEKFTAE---TNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNC---SNNYGPYQHIEKFIPRQITNILA 209 (346)
T ss_dssp STTTTCSTTSSBCTT---SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE---CCEESTTCCTTSHHHHHHHHHHH
T ss_pred ccccccCcccccccC---CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEee---cceeCCCCCccchhHHHHHHHHc
Confidence 1122222 2334456677888999999988765543 67776 5667764 24445556
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcccCCc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGESGK 292 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~ 292 (303)
+....+++++.+.++|+|++|+|++++.++.++...+.
T Consensus 210 ~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~ 247 (346)
T d1oc2a_ 210 GIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMGET 247 (346)
T ss_dssp TCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCCTTCE
T ss_pred CCceeEeCCCCccccccchhhHHHHHHHHHhhcccCcc
Confidence 66667889999999999999999999999887765543
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.93 E-value=1.2e-25 Score=200.43 Aligned_cols=229 Identities=17% Similarity=0.144 Sum_probs=160.1
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+|+||||||+||||++|++.|+++|++ |++++|+.+. ...+....... .......++.+|+.+
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~---V~~~vR~~~~---~~~~~~~~~~~----------~~~~~~~~~~~Dl~~ 73 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHGYK---VRGTARSASK---LANLQKRWDAK----------YPGRFETAVVEDMLK 73 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHHHHHHHH----------STTTEEEEECSCTTS
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCcCE---EEEEeCCchh---HHHHHHhhhcc----------ccccccEEEeccccc
Confidence 4799999999999999999999999998 8899997532 22222221110 111344567899999
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCC------Cc
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPR------ER 196 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~------~~ 196 (303)
.. .+..++.++|+|+|+++......+...++.+|+.++.+++++|.+.+++++|||+||..+.... ..
T Consensus 74 ~~------~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~ 147 (342)
T d1y1pa1 74 QG------AYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIY 147 (342)
T ss_dssp TT------TTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCE
T ss_pred hh------hhhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcc
Confidence 87 5778889999999999998887778888899999999999999998679999999997432211 11
Q ss_pred cccCC-------------CCCCCChhhHHHHHHHHHHHHHHhhCcCCc-----EEeecceecC-ccCh-------HHHHH
Q psy17679 197 IDEEF-------------YPVPLKYENLIQLISETGDEELSEMTPNRV-----HISGTGWIDN-VYGP-------IGMLV 250 (303)
Q Consensus 197 ~~E~~-------------~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~-----~ii~pg~~~~-~~g~-------~~~~~ 250 (303)
..|+. ...+..+...|..+|..+|.+++.+...+. .+++|+.+.+ .+++ ..++.
T Consensus 148 ~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~ 227 (342)
T d1y1pa1 148 LDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMM 227 (342)
T ss_dssp ECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHH
T ss_pred ccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHH
Confidence 22221 123556778899999999998876654322 4455653322 1111 13444
Q ss_pred HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcccCCcch
Q psy17679 251 GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGESGKVE 294 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~~ 294 (303)
.+..+...... .+...++|+|++|+|++++.++.++...+..+
T Consensus 228 ~l~~g~~~~~~-~~~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~ 270 (342)
T d1y1pa1 228 SLFNGEVSPAL-ALMPPQYYVSAVDIGLLHLGCLVLPQIERRRV 270 (342)
T ss_dssp HHHTTCCCHHH-HTCCSEEEEEHHHHHHHHHHHHHCTTCCSCEE
T ss_pred HHHcCCcCccc-CCccceeeeeHHHHHHHHHHhhcCccccceEE
Confidence 45555433332 34566899999999999999999877665544
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=3.7e-25 Score=186.83 Aligned_cols=206 Identities=17% Similarity=0.131 Sum_probs=153.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|++|+|||||||||+|++|+++|+++|+ ++.|++++|++.... ......+....+|+.
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~-~~~v~~~~R~~~~~~---------------------~~~~~~i~~~~~D~~ 69 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGL-FSKVTLIGRRKLTFD---------------------EEAYKNVNQEVVDFE 69 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTC-CSEEEEEESSCCCCC---------------------SGGGGGCEEEECCGG
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCC-CCEEEEEecChhhhc---------------------ccccceeeeeeeccc
Confidence 6778999999999999999999999974 346999999764322 112367888889998
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEF 201 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~ 201 (303)
+.+ ++..+++++|+|+|++|......+...+.++|+.++.+++++|.+. ++++|||+||......
T Consensus 70 ~~~------~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~fi~~Ss~~~~~~-------- 134 (232)
T d2bkaa1 70 KLD------DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKS-------- 134 (232)
T ss_dssp GGG------GGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT--------
T ss_pred ccc------cccccccccccccccccccccccchhhhhhhcccccceeeeccccc-CccccccCCccccccC--------
Confidence 876 6888889999999999987666666778889999999999999998 8999999999965422
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHH
Q psy17679 202 YPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMI 281 (303)
Q Consensus 202 ~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~ 281 (303)
....|..+|+.+|+.+........+|+|||.+.+..........+..... ..+..+......|+++|+|++++
T Consensus 135 ------~~~~Y~~~K~~~E~~l~~~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~I~~~dvA~a~i 207 (232)
T d2bkaa1 135 ------SNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFF-GSLPDSWASGHSVPVVTVVRAML 207 (232)
T ss_dssp ------CSSHHHHHHHHHHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHH-CSCCTTGGGGTEEEHHHHHHHHH
T ss_pred ------ccchhHHHHHHhhhccccccccceEEecCceeecCCCcCcHHHHHHHHHh-hccCCcccCCCeEEHHHHHHHHH
Confidence 12346778888999998765443479999877544322222222222221 22223344456799999999999
Q ss_pred HHHhhcccCC
Q psy17679 282 SIAWSIGESG 291 (303)
Q Consensus 282 ~~~~~~~~~~ 291 (303)
.++.++...+
T Consensus 208 ~~~~~~~~~~ 217 (232)
T d2bkaa1 208 NNVVRPRDKQ 217 (232)
T ss_dssp HHHTSCCCSS
T ss_pred HHHhcCccCC
Confidence 9988776543
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=6.5e-25 Score=193.07 Aligned_cols=197 Identities=11% Similarity=0.074 Sum_probs=145.6
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|||||||||||||++|+++|+++|+. |+++.+.. ..|+.+.
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~---vi~~~~~~-----------------------------------~~~~~~~ 43 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDV---ELVLRTRD-----------------------------------ELNLLDS 43 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTE---EEECCCTT-----------------------------------TCCTTCH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCE---EEEecCch-----------------------------------hccccCH
Confidence 579999999999999999999999886 54443321 2466665
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcceeccc----cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCccc--CCCC
Q psy17679 124 GLGLSETDRATLVK--QVNIVFHGAATVRF----DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTH--CPRE 195 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--~~dvVi~~a~~~~~----~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~--~~~~ 195 (303)
. .+..+++ .+|+|+|+|+.... .......+++|+.++.+++++|.+. +++||||+||..++ ....
T Consensus 44 ~------~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~SS~~vyg~~~~~ 116 (315)
T d1e6ua_ 44 R------AVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLAKQ 116 (315)
T ss_dssp H------HHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTCCS
T ss_pred H------HHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCceEcCCCCCC
Confidence 4 5666665 68999999987543 2344567889999999999999998 99999999999544 3445
Q ss_pred ccccCCCC--CCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH-----------------HHHHHH
Q psy17679 196 RIDEEFYP--VPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG-----------------MLVGIA 253 (303)
Q Consensus 196 ~~~E~~~~--~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~-----------------~~~~~~ 253 (303)
+++|+... .+..+...|..+|..+|++++.+....+ +++||+ ++|||.. ......
T Consensus 117 ~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~---~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (315)
T d1e6ua_ 117 PMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPT---NLYGPHDNFHPSNSHVIPALLRRFHEATAQ 193 (315)
T ss_dssp SBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC---EEESTTCCCCTTCSSHHHHHHHHHHHHHHH
T ss_pred CccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeec---cEECCCCCCCccccccceeeeccchhhhhc
Confidence 67776543 3444556799999999999998876544 677774 4455431 112222
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+....+++++...++|+|++|+++++..++....
T Consensus 194 ~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~~ 228 (315)
T d1e6ua_ 194 KAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAH 228 (315)
T ss_dssp TCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCH
T ss_pred cCCceEEcCCCceEEEEEEeehhHHHHHHhhhhcc
Confidence 23334567778889999999999999999886553
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.92 E-value=2.5e-24 Score=191.04 Aligned_cols=223 Identities=15% Similarity=0.046 Sum_probs=154.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|++||||||||||++|++.|+++||+ |++++|..+... ..+++.+.. .........+.++.+|+.+.
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~---V~~~~r~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~Di~~~ 68 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYE---VHGLIRRSSNFN-TQRINHIYI--------DPHNVNKALMKLHYADLTDA 68 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCC-CTTTTTTC----------------CCEEEEECCTTCH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCE---EEEEECCCcccc-hhhhhhhhh--------hhhhccccceEEEEccccCH
Confidence 489999999999999999999999998 999999654211 000000000 00000125788999999987
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcceecccc---ccHHHHHhhhHHHHHHHHHHHHhc----CCCceEEEEeCCcccC-C
Q psy17679 124 GLGLSETDRATLVK--QVNIVFHGAATVRFD---EHIKMAVKINVCGVQAMLQLAREM----KDLKAFVHVSTAFTHC-P 193 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--~~dvVi~~a~~~~~~---~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~i~iSS~~~~~-~ 193 (303)
. .+...++ ++|+|||+|+..... .++...+..|+.++.+++++++.. ....++++.||++... .
T Consensus 69 ~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~ 142 (339)
T d1n7ha_ 69 S------SLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST 142 (339)
T ss_dssp H------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS
T ss_pred H------HHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC
Confidence 6 5777665 789999999986543 345678889999999999998754 1345788888885544 3
Q ss_pred CCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH-------HHH----HHHHhhh-hh
Q psy17679 194 RERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI-------GML----VGIATGV-LH 258 (303)
Q Consensus 194 ~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~-------~~~----~~~~~~~-~~ 258 (303)
...++|+.+..|. ..|..+|..+|.++..+...+. +++|| +++|||. ..+ .....+. ..
T Consensus 143 ~~~~~E~~~~~p~---~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~---~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~ 216 (339)
T d1n7ha_ 143 PPPQSETTPFHPR---SPYAASKCAAHWYTVNYREAYGLFACNGIL---FNHESPRRGENFVTRKITRALGRIKVGLQTK 216 (339)
T ss_dssp CSSBCTTSCCCCC---SHHHHHHHHHHHHHHHHHHHHCCEEEEEEE---CCEECTTSCTTSHHHHHHHHHHHHHHTSCCC
T ss_pred CCCCCCCCCCCCc---chhhHHHHHHHHHHHHHHHHhCCCEEEEEE---ccccCCCCCCCCCcchhhHHHHHHhcCCCCe
Confidence 3467777655554 4566777889999888776654 67776 4566653 111 1222222 23
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcccC
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
..++++.+.++|+|++|+|+++..++.++...
T Consensus 217 ~~~g~~~~~rd~~~v~D~a~~~~~~~~~~~~~ 248 (339)
T d1n7ha_ 217 LFLGNLQASRDWGFAGDYVEAMWLMLQQEKPD 248 (339)
T ss_dssp EEESCTTCEEECEEHHHHHHHHHHHHTSSSCC
T ss_pred EEeCCCCccccceeeehHHHHHHHHHhcCCCC
Confidence 44677899999999999999999999987543
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.92 E-value=5.6e-24 Score=188.17 Aligned_cols=215 Identities=16% Similarity=0.176 Sum_probs=146.0
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGL 125 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~ 125 (303)
||||||||||||++|+++|+++|++ |+++++-... ...+.+..+.. ..+++++.+|+++.+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~---V~~id~~~~~-~~~~~~~~~~~--------------~~~~~~i~~Di~~~~- 62 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGID---LIVFDNLSRK-GATDNLHWLSS--------------LGNFEFVHGDIRNKN- 62 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCST-THHHHHHHHHT--------------TCCCEEEECCTTCHH-
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCE---EEEEECCCcc-cchhHHHHhhc--------------cCCcEEEEcccCCHH-
Confidence 7999999999999999999999998 8887653221 12233322221 268999999999976
Q ss_pred CCCHHHHHHHhc--cccEEEEcceecccc---ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCccc---CCCCcc
Q psy17679 126 GLSETDRATLVK--QVNIVFHGAATVRFD---EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTH---CPRERI 197 (303)
Q Consensus 126 ~~~~~~~~~~~~--~~dvVi~~a~~~~~~---~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~---~~~~~~ 197 (303)
.+.++++ ++|+|||+|+..... .+....+++|+.|+.+|++++... +++++|++||+... ....+.
T Consensus 63 -----~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~i~~sS~~~~~~~~~~~~~ 136 (338)
T d1orra_ 63 -----DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYGDLEQYKY 136 (338)
T ss_dssp -----HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGTTCTTSCE
T ss_pred -----HHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcc-ccccccccccccccccccccccc
Confidence 6888887 569999999987643 355788899999999999999998 77776666666221 111111
Q ss_pred ccC-------------CCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccCh-----------HHHHH
Q psy17679 198 DEE-------------FYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGP-----------IGMLV 250 (303)
Q Consensus 198 ~E~-------------~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~-----------~~~~~ 250 (303)
.+. ....+..+...|..+|...|.+.......+. .++++ +++|++ ..++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 213 (338)
T d1orra_ 137 NETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRH---SSMYGGRQFATYDQGWVGWFCQ 213 (338)
T ss_dssp EECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE---CCEECTTCCCBTTBCHHHHHHH
T ss_pred ccccccccccccccCcccCCccccccccccccchhhhhhhhhhhccCcccccccc---cceeeccccccccccccchhhH
Confidence 110 0112334566777778888888776655443 22322 122211 12333
Q ss_pred HHHh-----hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 251 GIAT-----GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 251 ~~~~-----~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.... +....++++|.+.++|+|++|+|++++.++.++.
T Consensus 214 ~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~ 256 (338)
T d1orra_ 214 KAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVS 256 (338)
T ss_dssp HHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHH
T ss_pred HHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhccc
Confidence 3322 3445678889999999999999999999987654
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=2.8e-24 Score=177.90 Aligned_cols=196 Identities=15% Similarity=0.044 Sum_probs=144.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|.+|||+||||||++|++++++|+++|++ |++++|++++.. .....+++++.+|+.
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~---V~~~~R~~~~~~---------------------~~~~~~~~~~~gD~~ 56 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYE---VTVLVRDSSRLP---------------------SEGPRPAHVVVGDVL 56 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCGGGSC---------------------SSSCCCSEEEESCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCE---EEEEEcChhhcc---------------------ccccccccccccccc
Confidence 56889999999999999999999999987 999999865321 011267899999999
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCC
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEF 201 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~ 201 (303)
|.+ ++.++++++|+|||++|....... .+++..++.++++++++. +++|||++||.+......
T Consensus 57 d~~------~l~~al~~~d~vi~~~g~~~~~~~----~~~~~~~~~~l~~aa~~~-~v~r~i~~ss~~~~~~~~------ 119 (205)
T d1hdoa_ 57 QAA------DVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPT------ 119 (205)
T ss_dssp SHH------HHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTT------
T ss_pred chh------hHHHHhcCCCEEEEEeccCCchhh----hhhhHHHHHHHHHHHHhc-CCCeEEEEeeeeccCCCc------
Confidence 977 789999999999999997543322 245677889999999998 999999999986543221
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHH
Q psy17679 202 YPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMI 281 (303)
Q Consensus 202 ~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~ 281 (303)
........+...|..+|++++...-. .++++||++.+-.. .+ ...++..+.....+|++.|+|++++
T Consensus 120 --~~~~~~~~~~~~~~~~e~~l~~~~~~-~tiirp~~~~~~~~---------~~-~~~~~~~~~~~~~~i~~~DvA~~~~ 186 (205)
T d1hdoa_ 120 --KVPPRLQAVTDDHIRMHKVLRESGLK-YVAVMPPHIGDQPL---------TG-AYTVTLDGRGPSRVISKHDLGHFML 186 (205)
T ss_dssp --CSCGGGHHHHHHHHHHHHHHHHTCSE-EEEECCSEEECCCC---------CS-CCEEESSSCSSCSEEEHHHHHHHHH
T ss_pred --cccccccccchHHHHHHHHHHhcCCc-eEEEecceecCCCC---------cc-cEEEeeCCCCCCCcCCHHHHHHHHH
Confidence 11122334555677788887753222 28999987754221 11 1233445677788999999999999
Q ss_pred HHHhhcccCC
Q psy17679 282 SIAWSIGESG 291 (303)
Q Consensus 282 ~~~~~~~~~~ 291 (303)
.++.++.-.+
T Consensus 187 ~~l~~~~~~g 196 (205)
T d1hdoa_ 187 RCLTTDEYDG 196 (205)
T ss_dssp HTTSCSTTTT
T ss_pred HHhCCCCCCC
Confidence 9998876443
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=2.8e-23 Score=184.98 Aligned_cols=220 Identities=15% Similarity=0.096 Sum_probs=144.3
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc-------ccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEE
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG-------KDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVA 117 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~-------~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~ 117 (303)
|||||||||||+|++|+++|++.|++ |++++|.... .....+++.+. ..++.+++
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~---V~~ld~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~ 64 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYL---PVVIDNFHNAFRGGGSLPESLRRVQELT---------------GRSVEFEE 64 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCC---EEEEECSSSSCBCSSSSBHHHHHHHHHH---------------TCCCEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCE---EEEEECCCccccccccchHHHHHHHHhc---------------CCCcEEEE
Confidence 68999999999999999999999998 8887652211 11222222211 26899999
Q ss_pred ecCCCCCCCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccC
Q psy17679 118 GDCSLPGLGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHC 192 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~ 192 (303)
+|++|.+ .+.+++. .+++++|+||.... ..++...+++|+.++.++++++... ++++|+|+||+....
T Consensus 65 ~Dl~d~~------~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-~v~~~i~~ss~~~~~ 137 (346)
T d1ek6a_ 65 MDILDQG------ALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATVYG 137 (346)
T ss_dssp CCTTCHH------HHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGGC
T ss_pred eeccccc------cccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-Ccccccccccceeee
Confidence 9999976 6777665 67789999997653 2345677899999999999999999 999999999994433
Q ss_pred CCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC-c---EEeecceecCcc-----ChH------HHH---HHHHh
Q psy17679 193 PRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR-V---HISGTGWIDNVY-----GPI------GML---VGIAT 254 (303)
Q Consensus 193 ~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~-~---~ii~pg~~~~~~-----g~~------~~~---~~~~~ 254 (303)
...............+...|..+|..+|..+..+.... + +++||+.+.+.. |+. .++ .....
T Consensus 138 ~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (346)
T d1ek6a_ 138 NPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAI 217 (346)
T ss_dssp SCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHH
T ss_pred ccccccccccccccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHH
Confidence 22211111111222233456677778888887664432 2 666664332221 110 111 12122
Q ss_pred --hhhhhcc------CCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 255 --GVLHTHL------INLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 255 --~~~~~~~------~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
+....++ ..+.+.+||+|++|+|.++..++.....
T Consensus 218 ~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~ 260 (346)
T d1ek6a_ 218 GRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE 260 (346)
T ss_dssp TSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTT
T ss_pred cCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhcccccc
Confidence 2222222 3466789999999999999988766543
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.91 E-value=5.8e-24 Score=189.89 Aligned_cols=220 Identities=16% Similarity=0.074 Sum_probs=152.4
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+.++|||||||||||||++|++.|+++|++ |++++|..+....... . ....++++++.+|+
T Consensus 5 ~~~~KkILVTG~tGfIGs~lv~~Ll~~g~~---V~~~~r~~~~~~~~~~--~--------------~~~~~~i~~~~~Dl 65 (356)
T d1rkxa_ 5 FWQGKRVFVTGHTGFKGGWLSLWLQTMGAT---VKGYSLTAPTVPSLFE--T--------------ARVADGMQSEIGDI 65 (356)
T ss_dssp HHTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCSSSSCHHH--H--------------TTTTTTSEEEECCT
T ss_pred hhCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCCCccHHHHh--h--------------hhcccCCeEEEeec
Confidence 468899999999999999999999999997 9999998754331111 0 01125899999999
Q ss_pred CCCCCCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC--
Q psy17679 121 SLPGLGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP-- 193 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~-- 193 (303)
+|++ .+.++++ .+|+|+|+|+.... ...+...+.+|+.++.++++++...+....+++.||.+....
T Consensus 66 ~d~~------~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~ 139 (356)
T d1rkxa_ 66 RDQN------KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKE 139 (356)
T ss_dssp TCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCC
T ss_pred cChH------hhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccc
Confidence 9976 6777776 67999999997643 244567889999999999999999844555666666633332
Q ss_pred -CCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---------c---EEeecceecCccChHH-----H---HHHH
Q psy17679 194 -RERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---------V---HISGTGWIDNVYGPIG-----M---LVGI 252 (303)
Q Consensus 194 -~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---------~---~ii~pg~~~~~~g~~~-----~---~~~~ 252 (303)
..+.+|+....|.++|+ .+|...|..+..+...+ . .+.+| +++|||.. + +...
T Consensus 140 ~~~~~~~~~~~~p~~~y~---~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~---~~vyGp~~~~~~~~i~~~~~~ 213 (356)
T d1rkxa_ 140 WIWGYRENEAMGGYDPYS---NSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRA---GNVIGGGDWALDRIVPDILRA 213 (356)
T ss_dssp SSSCBCTTSCBCCSSHHH---HHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEEC---CCEECTTCCCSSCHHHHHHHH
T ss_pred cccccccccccCCCCccc---cccccchhhhhHHhhhcccchhccccCceEEeccC---CCeeCCCcchhhHHHHHHHHH
Confidence 22445554455665555 44455565554433211 1 34444 56777652 2 2223
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcccCC
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGESG 291 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~ 291 (303)
..+....+++.+.+.++++|++|+|.++..++.++...+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~~~~~~~~~ 252 (356)
T d1rkxa_ 214 FEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDG 252 (356)
T ss_dssp HHTTCCEECSCTTCEECCEETHHHHHHHHHHHHHHHHTC
T ss_pred HhCCCceEEeeccccccccccccccchhhhhhhhhcccc
Confidence 334444567888999999999999999999988765443
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.91 E-value=2.7e-23 Score=185.36 Aligned_cols=216 Identities=18% Similarity=0.157 Sum_probs=146.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc-cHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK-DIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~-~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
|.|||||||||||++|++.|+++|++ |+++++..... ......+.+. ..+++++++|+.|.
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~---V~~~d~~~~~~~~~~~~~~~~~---------------~~~v~~~~~Dl~d~ 63 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYD---CVVADNLSNSTYDSVARLEVLT---------------KHHIPFYEVDLCDR 63 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCTHHHHHHHHHH---------------TSCCCEEECCTTCH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCe---EEEEECCCCcchhHHHhHHhhc---------------ccCCeEEEeecCCH
Confidence 56999999999999999999999987 88887644322 1112211111 26889999999997
Q ss_pred CCCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCC-----
Q psy17679 124 GLGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCP----- 193 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~----- 193 (303)
+ .+..++. ++|+|||+|+.... .........+|+.++.+++++|++. +++|||++||..+.+.
T Consensus 64 ~------~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~SS~~vyg~~~~~~ 136 (347)
T d1z45a2 64 K------GLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVYGDATRFP 136 (347)
T ss_dssp H------HHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCCGGGST
T ss_pred H------HHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEeecceeeecCcccCC
Confidence 6 6777776 89999999998643 3345678889999999999999998 9999999999954432
Q ss_pred -CCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC--Cc---EEeecceec-----CccChH------HHH---HHHH
Q psy17679 194 -RERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN--RV---HISGTGWID-----NVYGPI------GML---VGIA 253 (303)
Q Consensus 194 -~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~--~~---~ii~pg~~~-----~~~g~~------~~~---~~~~ 253 (303)
..+++|+....| .+.|..+|.++|.+++.+... .. +++||+.+. +.+|+. .++ ....
T Consensus 137 ~~~~~~e~~~~~p---~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~ 213 (347)
T d1z45a2 137 NMIPIPEECPLGP---TNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVA 213 (347)
T ss_dssp TCCSBCTTSCCCC---CSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHH
T ss_pred CCCccccccCCCC---CChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHH
Confidence 234555544344 456778888999998876432 22 566653221 122221 122 2222
Q ss_pred hh--hhhhccCCC------CccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TG--VLHTHLINL------NTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~--~~~~~~~~~------~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+ .+..+++.+ ...+|++++.|++.+++.++....
T Consensus 214 ~~~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 256 (347)
T d1z45a2 214 VGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLE 256 (347)
T ss_dssp TTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHH
T ss_pred hcCCCCeEEeCCCccccCCceeeeeeeeecccccccccccccc
Confidence 22 223344433 456788889999999998887554
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.90 E-value=2e-23 Score=188.57 Aligned_cols=225 Identities=15% Similarity=0.088 Sum_probs=148.7
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeC---CCC---cccHHHHHHHHHHhHHHhhhhccCcCcCCceEEE
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVR---PKK---GKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAV 116 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R---~~~---~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~ 116 (303)
.|||||||||||||++|+++|+++ |++ |+++++ +.. .....+.....+.. ............+.++
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~---V~~~D~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 74 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHS---VVIVDSLVGTHGKSDHVETRENVARKLQQ----SDGPKPPWADRYAALE 74 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCE---EEEEECCTTTTTCCTTSCCHHHHHHHHHH----SCSSCCTTTTCCCEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCE---EEEEecCCcccccchhhhhhhhHHHHhhh----hccccccccccceEEE
Confidence 478999999999999999999974 676 888764 211 11112222221111 0001112223578899
Q ss_pred EecCCCCCCCCCHHHHHHHhc---cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy17679 117 AGDCSLPGLGLSETDRATLVK---QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFT 190 (303)
Q Consensus 117 ~~Dl~d~~~~~~~~~~~~~~~---~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~ 190 (303)
.+|++|.+ .+.++++ .+|+|+|+|+.... .......+++|+.++.++++++... ++++++++||...
T Consensus 75 ~~Di~d~~------~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~~~~s~~~ 147 (383)
T d1gy8a_ 75 VGDVRNED------FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSSAAI 147 (383)
T ss_dssp ESCTTCHH------HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGG
T ss_pred ECcccCHH------Hhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCccccccccccc
Confidence 99999976 6777765 67999999998654 2344567788999999999999998 8999999998844
Q ss_pred cCC--C-------CccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChHH-----------
Q psy17679 191 HCP--R-------ERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPIG----------- 247 (303)
Q Consensus 191 ~~~--~-------~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~~----------- 247 (303)
... . .++.|+. +..|...|..+|..+|.+++.+...++ +++||+ ++|||..
T Consensus 148 ~~~~~~~~~~~~~~~~~e~~---~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~---~vyG~~~~~~~~~~~~~~ 221 (383)
T d1gy8a_ 148 FGNPTMGSVSTNAEPIDINA---KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYF---NACGAHEDGDIGEHYQGS 221 (383)
T ss_dssp TBSCCC-----CCCCBCTTS---CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC---EEECCCTTSSCSCCSTTC
T ss_pred cccccccccccccccccccc---CCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecc---eeeccCcccccccccccc
Confidence 332 1 1233433 344555677788889999998876544 566653 4555432
Q ss_pred ------HHHHHHh----------------hhhhhccC------CCCccccceehhHHHHHHHHHHhhcc
Q psy17679 248 ------MLVGIAT----------------GVLHTHLI------NLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 248 ------~~~~~~~----------------~~~~~~~~------~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
++..+.. +....+++ +|.+.+||+|++|+|++++.++....
T Consensus 222 ~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~ 290 (383)
T d1gy8a_ 222 THLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVE 290 (383)
T ss_dssp CSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhc
Confidence 1122221 11112232 46778999999999999999998654
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.85 E-value=7.7e-22 Score=163.72 Aligned_cols=194 Identities=14% Similarity=0.129 Sum_probs=130.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
.|||||||||||+|++|+++|+++|+. ..|++++|++... .+++.....|+.+
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~-~~v~~~~r~~~~~-------------------------~~~~~~~~~d~~~- 54 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTL-AKVIAPARKALAE-------------------------HPRLDNPVGPLAE- 54 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTC-CEEECCBSSCCCC-------------------------CTTEECCBSCHHH-
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCe-EEEEEEeCCchhh-------------------------cccccccccchhh-
Confidence 489999999999999999999999874 3488888865321 1344444444322
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCCC
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFY 202 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~ 202 (303)
....+...+|+|||++|.... ......+...|+.++.+++++|+.. ++++|+++||..+...
T Consensus 55 -------~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~Ss~~~~~~--------- 117 (212)
T d2a35a1 55 -------LLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAK--------- 117 (212)
T ss_dssp -------HGGGCCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT---------
T ss_pred -------hhhccccchheeeeeeeeeccccccccccccchhhhhhhcccccccc-cccccccccccccccc---------
Confidence 112233468999999987532 3344678888999999999999998 9999999999865432
Q ss_pred CCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHH
Q psy17679 203 PVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMIS 282 (303)
Q Consensus 203 ~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~ 282 (303)
....|..+|..+|+.+........+|+||+.+ ||+..... ........+.......+.+||++|+|++++.
T Consensus 118 -----~~~~y~~~K~~~E~~l~~~~~~~~~I~Rp~~v---~G~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~ 188 (212)
T d2a35a1 118 -----SSIFYNRVKGELEQALQEQGWPQLTIARPSLL---FGPREEFR-LAEILAAPIARILPGKYHGIEACDLARALWR 188 (212)
T ss_dssp -----CSSHHHHHHHHHHHHHTTSCCSEEEEEECCSE---ESTTSCEE-GGGGTTCCCC----CHHHHHHHHHHHHHHHH
T ss_pred -----cccchhHHHHHHhhhccccccccceeeCCcce---eCCccccc-HHHHHHHHHhhccCCCCcEEEHHHHHHHHHH
Confidence 12357778888999887665444489999754 45432100 0000000111111233456999999999999
Q ss_pred HHhhcccC
Q psy17679 283 IAWSIGES 290 (303)
Q Consensus 283 ~~~~~~~~ 290 (303)
++.++...
T Consensus 189 ~~~~~~~g 196 (212)
T d2a35a1 189 LALEEGKG 196 (212)
T ss_dssp HHTCCCSE
T ss_pred HHcCCCCC
Confidence 99876543
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.84 E-value=1.3e-20 Score=163.14 Aligned_cols=194 Identities=21% Similarity=0.223 Sum_probs=133.6
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||||||||||+|++|++.|.+.|+ ++.+.+... .+.+|+++..
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~----~v~~~~~~~--------------------------------~~~~Dl~~~~ 44 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGN----LIALDVHSK--------------------------------EFCGDFSNPK 44 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSE----EEEECTTCS--------------------------------SSCCCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC----EEEEECCCc--------------------------------cccCcCCCHH
Confidence 6899999999999999999999875 445555422 1357888765
Q ss_pred CCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC--cccCCCCcc
Q psy17679 125 LGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA--FTHCPRERI 197 (303)
Q Consensus 125 ~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~--~~~~~~~~~ 197 (303)
.+.++++ ++|+|||+||.... .......++.|+.++.++++++... + .+++++||+ |......++
T Consensus 45 ------~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~ss~~~~~~~~~~~~ 116 (298)
T d1n2sa_ 45 ------GVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-G-AWVVHYSTDYVFPGTGDIPW 116 (298)
T ss_dssp ------HHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-T-CEEEEEEEGGGSCCCTTCCB
T ss_pred ------HHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcc-c-cccccccccccccCCCCCCC
Confidence 6777776 67999999997653 3455678889999999999999886 4 568888888 333444567
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHH--HHHHHHhhhhhhccCCCCccccceehhH
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIG--MLVGIATGVLHTHLINLNTVTDMVPVDL 275 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D 275 (303)
+|.....|... |..+|..+|.++........ ++++++....+|... .+........ .+...+....+++|+.|
T Consensus 117 ~E~~~~~p~~~---y~~~k~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d 191 (298)
T d1n2sa_ 117 QETDATSPLNV---YGKTKLAGEKALQDNCPKHL-IFRTSWVYAGKGNNFAKTMLRLAKERQ-TLSVINDQYGAPTGAEL 191 (298)
T ss_dssp CTTSCCCCSSH---HHHHHHHHHHHHHHHCSSEE-EEEECSEECSSSCCHHHHHHHHHHHCS-EEEEECSCEECCEEHHH
T ss_pred ccccccCCCch---HhhhhhhhhhhHHhhhcccc-cccccceeeccCCccchhhhhhhcccc-eeecccceeecccccch
Confidence 78766555554 45566778888887766654 444434333333322 2223333222 22233567888999999
Q ss_pred HHHHHHHHHhhc
Q psy17679 276 VVNSMISIAWSI 287 (303)
Q Consensus 276 ~a~ai~~~~~~~ 287 (303)
+++++..++...
T Consensus 192 ~~~~~~~~i~~~ 203 (298)
T d1n2sa_ 192 LADCTAHAIRVA 203 (298)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh
Confidence 999999887643
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.84 E-value=1.3e-20 Score=164.21 Aligned_cols=210 Identities=12% Similarity=0.036 Sum_probs=141.9
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
+++||||||||||+|++|+++|+++|++ |++++|++...... ..+.+... ...+++++++|+.+
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~~---V~~~~R~~~~~~~~-~~~~~~~~------------~~~~v~~v~~d~~d 65 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGHP---TYVLFRPEVVSNID-KVQMLLYF------------KQLGAKLIEASLDD 65 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCC---EEEECCSCCSSCHH-HHHHHHHH------------HTTTCEEECCCSSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCE---EEEEECCCcccchh-HHHHHhhh------------ccCCcEEEEeeccc
Confidence 4578999999999999999999999998 99999987654322 11111110 02679999999999
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFY 202 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~ 202 (303)
.+ .+...+.++++++++++.... ..|..+..++++++... ...++++.||.+..... .
T Consensus 66 ~~------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~a~~~-~~~~~v~~Ss~g~~~~~-------~ 123 (312)
T d1qyda_ 66 HQ------RLVDALKQVDVVISALAGGVL--------SHHILEQLKLVEAIKEA-GNIKRFLPSEFGMDPDI-------M 123 (312)
T ss_dssp HH------HHHHHHTTCSEEEECCCCSSS--------STTTTTHHHHHHHHHHS-CCCSEEECSCCSSCTTS-------C
T ss_pred ch------hhhhhccCcchhhhhhhhccc--------ccchhhhhHHHHHHHHh-cCCcEEEEeeccccCCC-------c
Confidence 76 788899999999999886432 23556667888888888 66677777776433221 1
Q ss_pred CCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHH---HHHHHHhhhhhhccCCCCccccceehhHHHHH
Q psy17679 203 PVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIG---MLVGIATGVLHTHLINLNTVTDMVPVDLVVNS 279 (303)
Q Consensus 203 ~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a 279 (303)
..+..+...+...+...+.+.....-.+ ++++|+.+.+.+.+.. .......+....+++.++..++|||++|+|++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a 202 (312)
T d1qyda_ 124 EHALQPGSITFIDKRKVRRAIEAASIPY-TYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTY 202 (312)
T ss_dssp CCCCSSTTHHHHHHHHHHHHHHHTTCCB-CEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHH
T ss_pred ccccchhhhhhHHHHHHHHhhcccccce-EEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHH
Confidence 1233344455555666666665544333 6888876543322110 00111123334567888999999999999999
Q ss_pred HHHHHhhcccCC
Q psy17679 280 MISIAWSIGESG 291 (303)
Q Consensus 280 i~~~~~~~~~~~ 291 (303)
++.++.++...+
T Consensus 203 ~~~~l~~~~~~~ 214 (312)
T d1qyda_ 203 TIKSIDDPQTLN 214 (312)
T ss_dssp HHHHTTCGGGSS
T ss_pred HHHHhcCccccC
Confidence 999998876544
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.83 E-value=3.9e-20 Score=159.17 Aligned_cols=189 Identities=19% Similarity=0.175 Sum_probs=136.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||||||||||||++|++.|.++|++ |++++|+. +|+.|..
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~---Vi~~~r~~------------------------------------~D~~d~~ 42 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVE---VIPTDVQD------------------------------------LDITNVL 42 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEE---EEEECTTT------------------------------------CCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCE---EEEeechh------------------------------------ccCCCHH
Confidence 67999999999999999999999987 88888741 3677655
Q ss_pred CCCCHHHHHHHhc--cccEEEEcceeccc---cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcc--cCCCCcc
Q psy17679 125 LGLSETDRATLVK--QVNIVFHGAATVRF---DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFT--HCPRERI 197 (303)
Q Consensus 125 ~~~~~~~~~~~~~--~~dvVi~~a~~~~~---~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~--~~~~~~~ 197 (303)
++.++++ ++|+|||+|+.... ..........|+.....+.+.+... ..+++++||..+ .....++
T Consensus 43 ------~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~ss~~v~~~~~~~~~ 114 (281)
T d1vl0a_ 43 ------AVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV--GAEIVQISTDYVFDGEAKEPI 114 (281)
T ss_dssp ------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH--TCEEEEEEEGGGSCSCCSSCB
T ss_pred ------HHHHHHHHcCCCEEEeeccccccccccccchhhcccccccccccccccccc--cccccccccceeeeccccccc
Confidence 6777776 78999999998653 2344566777888888888888775 356777777733 3344566
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChH-----HHHHHHHhhhhhhccCCCCcccccee
Q psy17679 198 DEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPI-----GMLVGIATGVLHTHLINLNTVTDMVP 272 (303)
Q Consensus 198 ~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~ 272 (303)
.|.+...|.. .|..+|...|.+++...... .++||+++ ||+. .++.....+....++ ++..++++|
T Consensus 115 ~e~~~~~~~~---~~~~~k~~~e~~~~~~~~~~-~i~R~~~v---yG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~ 185 (281)
T d1vl0a_ 115 TEFDEVNPQS---AYGKTKLEGENFVKALNPKY-YIVRTAWL---YGDGNNFVKTMINLGKTHDELKVV--HDQVGTPTS 185 (281)
T ss_dssp CTTSCCCCCS---HHHHHHHHHHHHHHHHCSSE-EEEEECSE---ESSSSCHHHHHHHHHHHCSEEEEE--SSCEECCEE
T ss_pred cccccccchh---hhhhhhhHHHHHHHHhCCCc-cccceeEE---eCCCcccccchhhhhccCCceeec--CCceeccch
Confidence 7766554544 45566677888888776654 58888654 5543 233444444444444 468899999
Q ss_pred hhHHHHHHHHHHhhccc
Q psy17679 273 VDLVVNSMISIAWSIGE 289 (303)
Q Consensus 273 v~D~a~ai~~~~~~~~~ 289 (303)
++|+|+++..+++++..
T Consensus 186 v~D~~~~~~~~~~~~~~ 202 (281)
T d1vl0a_ 186 TVDLARVVLKVIDEKNY 202 (281)
T ss_dssp HHHHHHHHHHHHHHTCC
T ss_pred hhhhhhhhhhhhhhccc
Confidence 99999999999987653
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.83 E-value=7.4e-21 Score=159.56 Aligned_cols=211 Identities=18% Similarity=0.150 Sum_probs=140.0
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+++|||||||||+|+++++.|+++|+++ .|+++.|+++... ....+++++.+|+.+
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v-~v~~~~R~~~~~~----------------------~~~~~~~~~~~d~~~ 58 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKE----------------------KIGGEADVFIGDITD 58 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTC-EEEEEESCHHHHH----------------------HTTCCTTEEECCTTS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcE-EEEEEcCCHHHHH----------------------hccCCcEEEEeeecc
Confidence 46899999999999999999999999874 3777888653111 112578899999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceecccc----------------ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFD----------------EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVS 186 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~----------------~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iS 186 (303)
.. .+.++++++|+|||+++..... ........+|+.++.+++..+... ..+++.+.|
T Consensus 59 ~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s 131 (252)
T d2q46a1 59 AD------SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIVVVG 131 (252)
T ss_dssp HH------HHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEEEEE
T ss_pred cc------ccccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-ccccccccc
Confidence 77 7889999999999999874321 122345577899999999999888 788888888
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHHHHHHHHhhhhhhccCCCCc
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNT 266 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 266 (303)
+........+. .......+...+...+.+.....-. .+++||+++ ||+.........+....+ ...
T Consensus 132 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-~~ilRp~~v---~g~~~~~~~~~~~~~~~~---~~~ 197 (252)
T d2q46a1 132 SMGGTNPDHPL-------NKLGNGNILVWKRKAEQYLADSGTP-YTIIRAGGL---LDKEGGVRELLVGKDDEL---LQT 197 (252)
T ss_dssp ETTTTCTTCGG-------GGGGGCCHHHHHHHHHHHHHHSSSC-EEEEEECEE---ECSCTTSSCEEEESTTGG---GGS
T ss_pred ccccCCCCccc-------ccccccchhhhhhhhhhhhhccccc-ceeecceEE---ECCCcchhhhhhccCccc---ccC
Confidence 87543322111 1112223334444444444433222 279999765 444321111111111111 234
Q ss_pred cccceehhHHHHHHHHHHhhcccCCcchhhc
Q psy17679 267 VTDMVPVDLVVNSMISIAWSIGESGKVEKAI 297 (303)
Q Consensus 267 ~~~~i~v~D~a~ai~~~~~~~~~~~~~~~~~ 297 (303)
..+|||++|+|++++.++.++...++.+++.
T Consensus 198 ~~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~ 228 (252)
T d2q46a1 198 DTKTVPRADVAEVCIQALLFEEAKNKAFDLG 228 (252)
T ss_dssp SCCEEEHHHHHHHHHHHTTCGGGTTEEEEEE
T ss_pred CCCeEEHHHHHHHHHHHhCCccccCcEEEEe
Confidence 4679999999999999999887776665543
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.80 E-value=1.2e-19 Score=156.96 Aligned_cols=204 Identities=14% Similarity=0.067 Sum_probs=136.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+|||||||||||+|+++++.|++.|++ |++++|++...........+... ...+++++.+|+.+
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~---V~~l~R~~~~~~~~~~~~~~~~~------------~~~~~~~~~~d~~~ 66 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHP---TFLLVRESTASSNSEKAQLLESF------------KASGANIVHGSIDD 66 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCC---EEEECCCCCTTTTHHHHHHHHHH------------HTTTCEEECCCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCe---EEEEECCCccccchhHHHHHHhh------------ccCCcEEEEeeccc
Confidence 4688999999999999999999999998 99999987654433332222110 01578899999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFY 202 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~ 202 (303)
.. .....+++++.|+|+++.... .+...+++++... +++++++.||.+......
T Consensus 67 ~~------~~~~~~~~~~~vi~~~~~~~~------------~~~~~~~~a~~~~-~~~~~~~~s~~~~~~~~~------- 120 (307)
T d1qyca_ 67 HA------SLVEAVKNVDVVISTVGSLQI------------ESQVNIIKAIKEV-GTVKRFFPSEFGNDVDNV------- 120 (307)
T ss_dssp HH------HHHHHHHTCSEEEECCCGGGS------------GGGHHHHHHHHHH-CCCSEEECSCCSSCTTSC-------
T ss_pred ch------hhhhhhhhceeeeeccccccc------------chhhHHHHHHHHh-ccccceeeeccccccccc-------
Confidence 76 677888899999999886433 2335677888887 778888887764322211
Q ss_pred CCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCccChHH-----HHHHHHhhhhhhccCCCCccccceehhHHH
Q psy17679 203 PVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVYGPIG-----MLVGIATGVLHTHLINLNTVTDMVPVDLVV 277 (303)
Q Consensus 203 ~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 277 (303)
.+......+...+...+.++......+ ++++|+.+ ||+.. +......+....+++.+++.++|||++|+|
T Consensus 121 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~r~~~v---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 195 (307)
T d1qyca_ 121 -HAVEPAKSVFEVKAKVRRAIEAEGIPY-TYVSSNCF---AGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIG 195 (307)
T ss_dssp -CCCTTHHHHHHHHHHHHHHHHHHTCCB-EEEECCEE---HHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHH
T ss_pred -cccccccccccccccccchhhccCCCc-eeccccee---cCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHH
Confidence 112222333334445566665543333 68888655 44321 111112222334577889999999999999
Q ss_pred HHHHHHHhhcccCCc
Q psy17679 278 NSMISIAWSIGESGK 292 (303)
Q Consensus 278 ~ai~~~~~~~~~~~~ 292 (303)
++++.++.++...++
T Consensus 196 ~~~~~~l~~~~~~~~ 210 (307)
T d1qyca_ 196 TFTIKAVDDPRTLNK 210 (307)
T ss_dssp HHHHTTSSCGGGTTE
T ss_pred HHHHHHhcChhhcCc
Confidence 999999988765543
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.80 E-value=3.6e-19 Score=150.96 Aligned_cols=206 Identities=14% Similarity=0.109 Sum_probs=135.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+++||+++++.|.++|+. |.+++|+++.. +..++ .+..++++|+
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~~---V~~~~~~~~~~---~~~~~------------------~~~~~~~~Dv 57 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGAL---VALCDLRPEGK---EVAEA------------------IGGAFFQVDL 57 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSTTHH---HHHHH------------------HTCEEEECCT
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHHH---HHHHH------------------cCCeEEEEeC
Confidence 368899999999999999999999999997 88999976421 11111 2456789999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
++.+ ++.++++ ++|++|||||.... .+.|...+++|+.++.++.+++.+. ++..+||
T Consensus 58 ~~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii 131 (248)
T d2d1ya1 58 EDER------ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIV 131 (248)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccc
Confidence 9876 4444433 79999999997532 2456789999999998888877653 2557999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+.. +......|..+|...+.+.+.++..+. +.+.||++.+................
T Consensus 132 ~isS~~~~~------------~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~ 199 (248)
T d2d1ya1 132 NVASVQGLF------------AEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERT 199 (248)
T ss_dssp EECCGGGTS------------BCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------
T ss_pred ccccccccc------------cccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHH
Confidence 999997653 223455677777777777665544433 67889876543211110000000000
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
...+.......-+...+|+|+++++++.+.+
T Consensus 200 ~~~~~~~~pl~R~~~pedia~~v~fL~S~~s 230 (248)
T d2d1ya1 200 RRDWEDLHALRRLGKPEEVAEAVLFLASEKA 230 (248)
T ss_dssp CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 0000000111235689999999999987543
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.79 E-value=4e-18 Score=144.89 Aligned_cols=204 Identities=12% Similarity=0.017 Sum_probs=136.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||++.||+++++.|+++|+. |++++|+.. +++++.+ +...++.++.+|+
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dv 60 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGAR---VVLADVLDE------EGAATAR------------ELGDAARYQHLDV 60 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------TTGGGEEEEECCT
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHH------------HhCCceEEEEccc
Confidence 478999999999999999999999999997 889998642 3333222 1125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
++.+ ++.++++ ++|++|||||.... ...|...+++|+.++..+.+.+.+. ++..+||
T Consensus 61 ~~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II 134 (254)
T d1hdca_ 61 TIEE------DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIV 134 (254)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeec
Confidence 9876 4555443 78999999998542 2356788999999998888777543 2567999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+.. +...+..|..+|...+.+.+.++..+. +.+.||++.+.. .........
T Consensus 135 ~isS~~~~~------------~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~-----~~~~~~~~~ 197 (254)
T d1hdca_ 135 NISSAAGLM------------GLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-----TAETGIRQG 197 (254)
T ss_dssp EECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-----HHHHTCCCS
T ss_pred ccccchhcc------------cccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc-----chhcCHHHH
Confidence 999997653 222345677777777777766554432 678898764432 111111111
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......-...+-.+..+|+|+++++++.+.+
T Consensus 198 ~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a 228 (254)
T d1hdca_ 198 EGNYPNTPMGRVGNEPGEIAGAVVKLLSDTS 228 (254)
T ss_dssp TTSCTTSTTSSCB-CHHHHHHHHHHHHSGGG
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHHHHhchhh
Confidence 1111111111111357999999999986543
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.79 E-value=2.5e-18 Score=145.72 Aligned_cols=206 Identities=14% Similarity=0.108 Sum_probs=134.0
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+++||+++++.|+++|+. |.+.+|++... .++..+ ....++.++.+|+
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~---V~~~~~~~~~~-----~~~~~~------------~~g~~~~~~~~Dv 61 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGAD---IAIADLVPAPE-----AEAAIR------------NLGRRVLTVKCDV 61 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCHH-----HHHHHH------------HTTCCEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCchHH-----HHHHHH------------HcCCcEEEEEeeC
Confidence 478899999999999999999999999997 88889876421 111111 1125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++..+++ ++|++|||||.... .+.|...+++|+.++..+.+++.+. ++..++|
T Consensus 62 s~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv 135 (247)
T d2ew8a1 62 SQPG------DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRII 135 (247)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCcc
Confidence 9977 4555443 79999999998542 2456789999999998888777543 2557999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+.............
T Consensus 136 ~isS~~~~~------------~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~--- 200 (247)
T d2ew8a1 136 NLTSTTYWL------------KIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFD--- 200 (247)
T ss_dssp EECCGGGGS------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------
T ss_pred ccccchhcc------------cCcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHH---
Confidence 999997653 22234556677776666666554433 3 78889977544322111111111
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..........-+...+|+|+++++++.+.+
T Consensus 201 -~~~~~~~~l~r~~~pedvA~~v~fL~S~~s 230 (247)
T d2ew8a1 201 -VLPNMLQAIPRLQVPLDLTGAAAFLASDDA 230 (247)
T ss_dssp ----CTTSSSCSCCCTHHHHHHHHHHTSGGG
T ss_pred -HHHHHhccCCCCCCHHHHHHHHHHHhCchh
Confidence 001000111235678999999999887543
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=2.2e-18 Score=145.80 Aligned_cols=199 Identities=15% Similarity=0.151 Sum_probs=139.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+++||+++++.|+++|+. |++.+|++ ++++++... ..++.++.+|+
T Consensus 4 ~L~GK~~lITGas~GIG~aia~~la~~G~~---V~~~~r~~------~~l~~~~~~-------------~~~~~~~~~Dv 61 (244)
T d1pr9a_ 4 FLAGRRVLVTGAGKGIGRGTVQALHATGAR---VVAVSRTQ------ADLDSLVRE-------------CPGIEPVCVDL 61 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHHH-------------STTCEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEECCH------HHHHHHHHh-------------cCCCeEEEEeC
Confidence 578999999999999999999999999997 88999963 334333322 14678899999
Q ss_pred CCCCCCCCHHHHHHHhc---cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceEEEEe
Q psy17679 121 SLPGLGLSETDRATLVK---QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAFVHVS 186 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~---~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~i~iS 186 (303)
+|.+ ++.++++ ++|++|||||.... ...|...+++|+.++..+.+.+.+. ++..++|++|
T Consensus 62 ~d~~------~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~is 135 (244)
T d1pr9a_ 62 GDWE------ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVS 135 (244)
T ss_dssp TCHH------HHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred CCHH------HHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecc
Confidence 9976 5666665 78999999998542 2456788999999988887766542 2457899999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChH-----HHHHHHHhh
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPI-----GMLVGIATG 255 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~-----~~~~~~~~~ 255 (303)
|..+.. +......|..+|...+.+.+.++..+. +.+.||++.+..... ........
T Consensus 136 S~~~~~------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~- 202 (244)
T d1pr9a_ 136 SQCSQR------------AVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLN- 202 (244)
T ss_dssp CGGGTS------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHT-
T ss_pred cccccc------------cccchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHh-
Confidence 997653 223455677777777777776654332 778899775443211 11111111
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.++ ...+...+|+|+++++++.+.+
T Consensus 203 ---~~p-----l~R~~~peevA~~v~fL~S~~a 227 (244)
T d1pr9a_ 203 ---RIP-----LGKFAEVEHVVNAILFLLSDRS 227 (244)
T ss_dssp ---TCT-----TCSCBCHHHHHHHHHHHHSGGG
T ss_pred ---cCC-----CCCCcCHHHHHHHHHHHhCchh
Confidence 111 1236789999999999886543
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.79 E-value=1.6e-18 Score=146.03 Aligned_cols=195 Identities=12% Similarity=0.108 Sum_probs=133.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
++++|++|||||+++||+++++.|++.|+. |++++|++.. ..++..+++|+
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~Ga~---V~~~~r~~~~--------------------------~~~~~~~~~Dv 54 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHK---VAVTHRGSGA--------------------------PKGLFGVEVDV 54 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSSCC--------------------------CTTSEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCcch--------------------------hcCceEEEEec
Confidence 578899999999999999999999999997 9999997642 25677899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++.++++ ++|++|||||.... .+.|...+++|+.++..+.+.+.+. ++..+||
T Consensus 55 ~~~~------~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv 128 (237)
T d1uzma1 55 TDSD------AVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMI 128 (237)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceE
Confidence 9976 4444433 78999999997532 3456789999999988777655432 2567999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+.. +......|..+|...+.+.+.++..+. +.+.||++.+..... +.........
T Consensus 129 ~isS~~~~~------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~-~~~~~~~~~~ 195 (237)
T d1uzma1 129 FIGSVSGLW------------GIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-LDERIQQGAL 195 (237)
T ss_dssp EECCCCC-----------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-SCHHHHHHHG
T ss_pred EEcchhhcc------------CCcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhc-cCHHHHHHHH
Confidence 999996653 222345677777777777766544432 678899775433211 0011111111
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..++ ..-+...+|+|+++++++.+.+
T Consensus 196 ~~~p-----l~R~~~pedvA~~v~fL~S~~s 221 (237)
T d1uzma1 196 QFIP-----AKRVGTPAEVAGVVSFLASEDA 221 (237)
T ss_dssp GGCT-----TCSCBCHHHHHHHHHHHHSGGG
T ss_pred hcCC-----CCCCcCHHHHHHHHHHHhCchh
Confidence 1111 1225788999999999887543
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.79 E-value=4.7e-18 Score=145.07 Aligned_cols=208 Identities=13% Similarity=0.089 Sum_probs=137.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+++||++++++|.+.|+. |.+..|+... ..+.+.+.... ...++.++.+|+
T Consensus 4 dL~gK~alITGas~GIG~aia~~la~~G~~---Vv~~~r~~~~--~~~~~~~~~~~------------~g~~~~~~~~Dv 66 (261)
T d1geea_ 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAK---VVVNYRSKED--EANSVLEEIKK------------VGGEAIAVKGDV 66 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHHHH------------TTCEEEEEECCT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCcHH--HHHHHHHHHHh------------cCCcEEEEEccC
Confidence 478999999999999999999999999997 8889987431 11222111111 125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CC-CceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KD-LKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~-~~r~ 182 (303)
++.+ ++.++++ ++|++|||||.... ...|...+++|+.++..+.+.+.+. ++ ..+|
T Consensus 67 t~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~I 140 (261)
T d1geea_ 67 TVES------DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTV 140 (261)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccc
Confidence 9976 4554443 78999999998542 2356788999999988887776542 13 3458
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHH-hh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIA-TG 255 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~-~~ 255 (303)
|++||..+.. +...+..|..+|...+.+.+.++..+. +.+.||++.+..........-. ..
T Consensus 141 v~isS~~~~~------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~ 208 (261)
T d1geea_ 141 INMSSVHEKI------------PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRAD 208 (261)
T ss_dssp EEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHH
T ss_pred cccccchhcc------------cCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHH
Confidence 8999997653 223455677777777777766544433 7888998766543222111101 11
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....++ ..-+...+|+|+++++++...+
T Consensus 209 ~~~~~p-----l~R~~~pediA~~v~fL~S~~s 236 (261)
T d1geea_ 209 VESMIP-----MGYIGEPEEIAAVAAWLASSEA 236 (261)
T ss_dssp HHTTCT-----TSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHhcCC-----CCCCCCHHHHHHHHHHHhCchh
Confidence 111111 1225688999999999886543
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.78 E-value=4.4e-18 Score=143.77 Aligned_cols=198 Identities=11% Similarity=0.042 Sum_probs=138.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+++||+++++.|++.|+. |++.+|++. +++++... ...++.++.+|+
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~---V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dv 61 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAEGAK---VVFGDILDE------EGKAMAAE------------LADAARYVHLDV 61 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH------------TGGGEEEEECCT
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH------------hhCcceEEEeec
Confidence 468899999999999999999999999998 889999742 33332221 125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
++++ ++.++++ .+|++|||||.... ...|...+++|+.++..+.+.+.+. ++..+||
T Consensus 62 ~~~~------~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii 135 (244)
T d1nffa_ 62 TQPA------QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSII 135 (244)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEE
Confidence 9976 4444443 78999999998542 3456789999999988888766432 2557899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+... ...+..|..+|...+.+.+.++..+. +.|.||++.+.... ...
T Consensus 136 ~isS~~~~~~------------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~---------~~~ 194 (244)
T d1nffa_ 136 NISSIEGLAG------------TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD---------WVP 194 (244)
T ss_dssp EECCGGGTSC------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT---------TSC
T ss_pred eccccccccc------------cccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHh---------hhh
Confidence 9999976532 22455677777777777776654443 67889987654321 111
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..... .....+...+|+|+++++++...+
T Consensus 195 ~~~~~--~pl~R~~~p~diA~~v~fL~s~~s 223 (244)
T d1nffa_ 195 EDIFQ--TALGRAAEPVEVSNLVVYLASDES 223 (244)
T ss_dssp TTCSC--CSSSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHh--ccccCCCCHHHHHHHHHHHhChhh
Confidence 11110 111236789999999999987543
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.77 E-value=5.9e-18 Score=142.89 Aligned_cols=198 Identities=15% Similarity=0.127 Sum_probs=138.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+++||+++++.|+++|+. |++.+|+. ++++++... ..++.++.+|++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~Ga~---V~~~~r~~------~~l~~~~~~-------------~~~~~~~~~Dv~ 60 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHASGAK---VVAVTRTN------SDLVSLAKE-------------CPGIEPVCVDLG 60 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHHH-------------STTCEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHHh-------------cCCCeEEEEeCC
Confidence 57899999999999999999999999998 88899864 233333222 157889999999
Q ss_pred CCCCCCCHHHHHHHhc---cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceEEEEeC
Q psy17679 122 LPGLGLSETDRATLVK---QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAFVHVST 187 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~---~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~i~iSS 187 (303)
+.+ ++.++++ ++|++|||||.... ...|...+++|+.++..+.+.+.+. +...++|++||
T Consensus 61 ~~~------~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS 134 (242)
T d1cyda_ 61 DWD------ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSS 134 (242)
T ss_dssp CHH------HHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred CHH------HHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccch
Confidence 976 5666665 78999999997542 3346788999999998888766432 24468999999
Q ss_pred CcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChH-----HHHHHHHhhh
Q psy17679 188 AFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPI-----GMLVGIATGV 256 (303)
Q Consensus 188 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~-----~~~~~~~~~~ 256 (303)
..+.. +...+..|..+|...+.+.+.++..+. +.+.||++.+..... .....+..
T Consensus 135 ~~~~~------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~-- 200 (242)
T d1cyda_ 135 MVAHV------------TFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKE-- 200 (242)
T ss_dssp GGGTS------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHH--
T ss_pred hhccc------------cCCccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHh--
Confidence 96543 223455677777777777776644433 788899775543211 11111111
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+ ...+...+|+|+++++++.+.+
T Consensus 201 --~~p-----l~R~~~peeva~~v~fL~S~~s 225 (242)
T d1cyda_ 201 --RHP-----LRKFAEVEDVVNSILFLLSDRS 225 (242)
T ss_dssp --HST-----TSSCBCHHHHHHHHHHHHSGGG
T ss_pred --cCC-----CCCCcCHHHHHHHHHHHhCchh
Confidence 111 1235788999999999886543
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.77 E-value=1.6e-18 Score=146.59 Aligned_cols=202 Identities=12% Similarity=0.115 Sum_probs=136.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+++||+++++.|+++|+. |++.+|+++ .++++.+. ...+..++.+|++
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G~~---Vv~~~r~~~------~l~~~~~~------------~~~~~~~~~~Dv~ 60 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARGAK---VIGTATSEN------GAQAISDY------------LGANGKGLMLNVT 60 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSHH------HHHHHHHH------------HGGGEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEeCCHH------HHHHHHHH------------hCCCCcEEEEEec
Confidence 57899999999999999999999999998 888898642 23322221 0146788999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++.++++ ++|++|||||.... ...|...+++|+.++..+.+.+.+. ++..+||+
T Consensus 61 ~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~ 134 (243)
T d1q7ba_ 61 DPA------SIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIIT 134 (243)
T ss_dssp CHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeee
Confidence 876 4544443 79999999997542 2456788999999998888777543 25579999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
+||..+... ...+..|..+|...+.+.+.++..+. +.+.||++.+...... ..........
T Consensus 135 isS~~~~~~------------~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~ 201 (243)
T d1q7ba_ 135 IGSVVGTMG------------NGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRAL-SDDQRAGILA 201 (243)
T ss_dssp ECCHHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-CHHHHHHHHT
T ss_pred ecchhhcCC------------CCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhh-hhhHHHHHHh
Confidence 999966432 22345677777777777766554433 7888997754321110 0000011111
Q ss_pred hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.++ ...+...+|+|+++++++.+.+
T Consensus 202 ~~p-----l~R~~~pedvA~~v~fL~S~~s 226 (243)
T d1q7ba_ 202 QVP-----AGRLGGAQEIANAVAFLASDEA 226 (243)
T ss_dssp TCT-----TSSCBCHHHHHHHHHHHHSGGG
T ss_pred cCC-----CCCCCCHHHHHHHHHHHhCchh
Confidence 111 1235789999999999987544
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.77 E-value=5.3e-18 Score=144.69 Aligned_cols=206 Identities=18% Similarity=0.188 Sum_probs=136.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+++||+++++.|+++|+. |++.+|+... ..+..+++... ..++.++.+|++
T Consensus 6 L~GK~alITGas~GIG~aia~~la~~Ga~---V~~~~r~~~~--l~~~~~~~~~~-------------g~~~~~~~~Dv~ 67 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVEELASLGAS---VYTCSRNQKE--LNDCLTQWRSK-------------GFKVEASVCDLS 67 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHHH--HHHHHHHHHHT-------------TCEEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHH--HHHHHHHHHhc-------------CCCceEEEeeCC
Confidence 68999999999999999999999999997 8888986431 11222222211 257888999999
Q ss_pred CCCCCCCHHHHHHHh-------c-cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 122 LPGLGLSETDRATLV-------K-QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~-~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+.+ ++..++ . .+|++|||||.... ...|...+++|+.++..+.+++.+. ++..+||
T Consensus 68 ~~~------~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii 141 (259)
T d2ae2a_ 68 SRS------ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVV 141 (259)
T ss_dssp CHH------HHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccc
Confidence 876 344332 2 58999999997542 2346789999999988887776543 2567999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHH----HHHHHH
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIG----MLVGIA 253 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~----~~~~~~ 253 (303)
++||..+.. +...+..|..+|...+.+.+.++..+. +.+.||++.+...... ......
T Consensus 142 ~isS~~~~~------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~ 209 (259)
T d2ae2a_ 142 FISSVSGAL------------AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENL 209 (259)
T ss_dssp EECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHH
T ss_pred ccccccccc------------ccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHH
Confidence 999997653 222445677777777777776654443 6788997754331110 001111
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......++ ..-+...+|+|+++++++...+
T Consensus 210 ~~~~~~~p-----l~R~g~pedvA~~v~fL~S~~s 239 (259)
T d2ae2a_ 210 NKLIDRCA-----LRRMGEPKELAAMVAFLCFPAA 239 (259)
T ss_dssp HHHHHTST-----TCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHhcCC-----CCCCcCHHHHHHHHHHHhCchh
Confidence 11111111 1125688999999999887543
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.77 E-value=9.3e-18 Score=142.43 Aligned_cols=208 Identities=12% Similarity=0.117 Sum_probs=137.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+++||+++++.|++.|+. |.+.+|+.+.. .+..+++... ...++.++.+|++
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~Ga~---V~i~~r~~~~~--~~~~~~l~~~------------~g~~~~~~~~Dv~ 65 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCS---VVVASRNLEEA--SEAAQKLTEK------------YGVETMAFRCDVS 65 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHH------------HCCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHHH--HHHHHHHHHH------------hCCcEEEEEccCC
Confidence 68899999999999999999999999998 88999974321 1222222211 1257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++.++++ ++|++|||||.... ...|...+++|+.++..+.+.+.+. ++..++|+
T Consensus 66 ~~~------~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~ 139 (251)
T d1vl8a_ 66 NYE------EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIIN 139 (251)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccc
Confidence 976 4555443 79999999997532 3356788999999998888877654 24569999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHH-HHHHhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGML-VGIATGVL 257 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~-~~~~~~~~ 257 (303)
+||..+... +...+..|..+|...+.+.+.++..+ . +.|.||++.+........ ........
T Consensus 140 i~S~~~~~~-----------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~ 208 (251)
T d1vl8a_ 140 IGSLTVEEV-----------TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYML 208 (251)
T ss_dssp ECCGGGTCC-----------CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHH
T ss_pred cccchhccc-----------cCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHH
Confidence 999754321 22234557777777777766554433 3 788899886554322110 00111111
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..++ ...+...+|+|+++++++...+
T Consensus 209 ~~~p-----l~R~~~pedvA~~v~fL~S~~a 234 (251)
T d1vl8a_ 209 KRIP-----LGRTGVPEDLKGVAVFLASEEA 234 (251)
T ss_dssp HTCT-----TSSCBCGGGGHHHHHHHHSGGG
T ss_pred hcCC-----CCCCCCHHHHHHHHHHHhCchh
Confidence 1111 1125678999999999887543
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.77 E-value=4.6e-18 Score=145.20 Aligned_cols=213 Identities=14% Similarity=0.083 Sum_probs=134.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+++||+++++.|+++|+. |++..|++.. ..+.+.+.+.. ....++.++.+|++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~---V~~~~r~~~~--~~~~~~~~~~~-----------~~g~~~~~~~~Dv~ 65 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGAD---IVLNGFGDAA--EIEKVRAGLAA-----------QHGVKVLYDGADLS 65 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEECCSCHH--HHHHHHHHHHH-----------HHTSCEEEECCCTT
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCcHH--HHHHHHHHHHH-----------hcCCcEEEEECCCC
Confidence 67899999999999999999999999997 8888887421 12222211111 01257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++.++++ ++|++|||||.... ...|...+++|+.++..+.+.+.+. ++..+||+
T Consensus 66 ~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~ 139 (260)
T d1x1ta1 66 KGE------AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIIN 139 (260)
T ss_dssp SHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEee
Confidence 976 4555543 78999999997532 3456789999999988877766543 25579999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCc----CCc--EEeecceecCccChHHHHHHHHhh-h-
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTP----NRV--HISGTGWIDNVYGPIGMLVGIATG-V- 256 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~----~~~--~ii~pg~~~~~~g~~~~~~~~~~~-~- 256 (303)
+||..+... ...+..|..+|...+.+.+.++. ... +.+.||++.+..-...+-...... .
T Consensus 140 isS~~~~~~------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~ 207 (260)
T d1x1ta1 140 IASAHGLVA------------SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVD 207 (260)
T ss_dssp ECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------
T ss_pred cccccceec------------cCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCC
Confidence 999976532 22345577777767766665543 333 788899875543221110000000 0
Q ss_pred ----hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 ----LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ----~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....+.......-+...+|+|+++++++...+
T Consensus 208 ~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a 243 (260)
T d1x1ta1 208 QETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAA 243 (260)
T ss_dssp -------CHHHHCTTCCCBCHHHHHHHHHHHHSGGG
T ss_pred hHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhh
Confidence 00000000001235789999999999987543
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.77 E-value=4.1e-18 Score=144.98 Aligned_cols=202 Identities=11% Similarity=0.031 Sum_probs=136.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+++||++++++|+++|+. |++.+|+... ..+..+++... ..++.++.+|++
T Consensus 9 L~gK~alITGas~GIG~aia~~la~~Ga~---V~~~~r~~~~--~~~~~~~l~~~-------------g~~~~~~~~Dvs 70 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAITFATAGAS---VVVSDINADA--ANHVVDEIQQL-------------GGQAFACRCDIT 70 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCE---EEEEESCHHH--HHHHHHHHHHT-------------TCCEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHHH--HHHHHHHHHHc-------------CCcEEEEEccCC
Confidence 67899999999999999999999999998 8888986431 11112222211 257889999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEE
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHV 185 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~i 185 (303)
+++ ++..++ .++|++|||||.... ...|...+++|+.++..+.+.+.+. ++..++|++
T Consensus 71 ~~~------~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~i 144 (255)
T d1fmca_ 71 SEQ------ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTI 144 (255)
T ss_dssp CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHH------HHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccc
Confidence 976 444443 379999999997532 3456788999999988887766543 245689999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccCh----HHHHHHHHhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGP----IGMLVGIATG 255 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~----~~~~~~~~~~ 255 (303)
||..+.. +...+..|..+|...+.+.+.++..+. +.|.||++.+..-. ......+..
T Consensus 145 sS~~~~~------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~- 211 (255)
T d1fmca_ 145 TSMAAEN------------KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQ- 211 (255)
T ss_dssp CCGGGTC------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHH-
T ss_pred cccchhc------------cccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHh-
Confidence 9986653 223445677777777777766554432 68889977443211 111111111
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.++ ..-+...+|+|+++++++...+
T Consensus 212 ---~~p-----l~R~g~pedvA~~v~fL~S~~s 236 (255)
T d1fmca_ 212 ---HTP-----IRRLGQPQDIANAALFLCSPAA 236 (255)
T ss_dssp ---TCS-----SCSCBCHHHHHHHHHHHHSGGG
T ss_pred ---cCC-----CCCCcCHHHHHHHHHHHhCchh
Confidence 111 1125678999999999886543
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.77 E-value=4.1e-18 Score=145.28 Aligned_cols=206 Identities=15% Similarity=0.145 Sum_probs=136.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||++.||++++++|+++|+. |++.+|++.. ..+..+.+.. ....+.++.+|++
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~---V~i~~r~~~~--l~~~~~~~~~-------------~~~~~~~~~~D~s 65 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGLGAR---VYTCSRNEKE--LDECLEIWRE-------------KGLNVEGSVCDLL 65 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHHH--HHHHHHHHHH-------------TTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHH--HHHHHHHHHh-------------cCCCceEEEeecC
Confidence 68999999999999999999999999997 9999997431 1122222211 1257788999999
Q ss_pred CCCCCCCHHHHHHHhc--------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 122 LPGLGLSETDRATLVK--------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~--------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+.+ ++.++++ .+|++|||||.... ...|...+++|+.++..+.+++... ++..++|
T Consensus 66 ~~~------~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii 139 (258)
T d1ae1a_ 66 SRT------ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVI 139 (258)
T ss_dssp CHH------HHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccc
Confidence 976 4444332 47999999998642 3456788999999998888777543 3667999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHH-----HHH
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGML-----VGI 252 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~-----~~~ 252 (303)
++||..+... ...+..|..+|...+.+.+.++..+. +.+.||++.+.+....+- ...
T Consensus 140 ~isS~~~~~~------------~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~ 207 (258)
T d1ae1a_ 140 FLSSIAGFSA------------LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEE 207 (258)
T ss_dssp EECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHH
T ss_pred cccccccccc------------cccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHH
Confidence 9999977532 22455666777777777766554433 788899876543221110 111
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
........+. ..+...+|+|++++.++.+.+
T Consensus 208 ~~~~~~~~pl-----gR~~~pediA~~v~fL~S~~s 238 (258)
T d1ae1a_ 208 IDNFIVKTPM-----GRAGKPQEVSALIAFLCFPAA 238 (258)
T ss_dssp HHHHHHHSTT-----CSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHhcCCC-----CCCcCHHHHHHHHHHHhChhh
Confidence 1111111111 126899999999999996544
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.76 E-value=1.8e-17 Score=139.94 Aligned_cols=196 Identities=13% Similarity=0.054 Sum_probs=133.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+++||+++++.|+++|+. |++++|+. +++++..+. .+..++.+|++
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~G~~---V~~~~r~~------~~l~~~~~~--------------~~~~~~~~Dv~ 59 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKEGAR---LVACDIEE------GPLREAAEA--------------VGAHPVVMDVA 59 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHHT--------------TTCEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHHH--------------cCCeEEEEecC
Confidence 57899999999999999999999999997 88999963 233333221 46778999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~ 184 (303)
+.+ ++.++++ ++|++|||||.... ...|...+++|+.++..+.+.+.+. ++..++++
T Consensus 60 ~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~ 133 (242)
T d1ulsa_ 60 DPA------SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVL 133 (242)
T ss_dssp CHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeee
Confidence 976 4554443 68999999997532 2356789999999998888877654 24456777
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChH---HHHHHHHhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPI---GMLVGIATG 255 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~---~~~~~~~~~ 255 (303)
+||.+... ......|..+|...+.+.+.++..+. +.+.||++.+..... .........
T Consensus 134 ~ss~~~~~-------------~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~ 200 (242)
T d1ulsa_ 134 TASRVYLG-------------NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAA 200 (242)
T ss_dssp ECCGGGGC-------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHT
T ss_pred eccccccC-------------CCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhc
Confidence 77754322 12344567777777777665544433 788899875443211 121111111
Q ss_pred hhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
++ ...+...+|+|+++++++.+.+
T Consensus 201 ----~p-----l~R~~~pedia~~v~fL~S~~s 224 (242)
T d1ulsa_ 201 ----TP-----LGRAGKPLEVAYAALFLLSDES 224 (242)
T ss_dssp ----CT-----TCSCBCHHHHHHHHHHHHSGGG
T ss_pred ----CC-----CCCCCCHHHHHHHHHHHhchhh
Confidence 11 1125678999999999987544
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.76 E-value=5.2e-18 Score=144.63 Aligned_cols=212 Identities=13% Similarity=0.102 Sum_probs=136.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+++||+++++.|+++|+. |.+.+|+.... .+..+++... ....++.++.+|++
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~---V~i~~r~~~~l--~~~~~~~~~~-----------~~~~~~~~~~~Dvt 65 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAK---LSLVDVSSEGL--EASKAAVLET-----------APDAEVLTTVADVS 65 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHH-----------CTTCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHHH--HHHHHHHHhh-----------CCCCeEEEEeccCC
Confidence 57899999999999999999999999997 88999974321 1111111111 11247889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
|++ ++..+++ ++|++|||||.... ...|...+++|+.++..+.+++.+. ++..+||
T Consensus 66 ~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii 139 (258)
T d1iy8a_ 66 DEA------QVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVV 139 (258)
T ss_dssp SHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCc
Confidence 977 5555443 79999999996421 2356789999999998888776443 2567899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+.. +......|..+|.....+.+.++..+ . +.+.||++.+...... .........
T Consensus 140 ~isS~~~~~------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~-~~~~~~~~~ 206 (258)
T d1iy8a_ 140 NTASVGGIR------------GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENS-MKQLDPENP 206 (258)
T ss_dssp EECCGGGTS------------BCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHH-HHHHCTTCH
T ss_pred ccccHhhcc------------CCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHH-HhhcCcccH
Confidence 999997653 22245567777776776666554333 3 6788997754332111 111000000
Q ss_pred h---hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 H---THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~---~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. .-+.......-+...+|+|+++++++...+
T Consensus 207 ~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~s 240 (258)
T d1iy8a_ 207 RKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 240 (258)
T ss_dssp HHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 0 000001111235789999999999987543
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.76 E-value=5.3e-18 Score=143.98 Aligned_cols=203 Identities=15% Similarity=0.149 Sum_probs=136.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+++||+++++.|.+.|+. |++.+|+... ..+..+++ + ....++.++.+|+
T Consensus 7 ~lenKvalITGas~GIG~a~a~~la~~Ga~---V~~~~r~~~~--l~~~~~~l-~------------~~g~~~~~~~~Dv 68 (251)
T d2c07a1 7 CGENKVALVTGAGRGIGREIAKMLAKSVSH---VICISRTQKS--CDSVVDEI-K------------SFGYESSGYAGDV 68 (251)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSSE---EEEEESSHHH--HHHHHHHH-H------------TTTCCEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEECCHHH--HHHHHHHH-H------------hcCCcEEEEEccC
Confidence 367899999999999999999999999987 8889986431 11111122 1 1125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
++.+ ++..+++ ++|++|||||.... ...|...+++|+.++..+.+++.+. ++..+||
T Consensus 69 t~~~------~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IV 142 (251)
T d2c07a1 69 SKKE------EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRII 142 (251)
T ss_dssp TCHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEE
Confidence 9976 4554443 78999999998542 2456788999999988887766533 2567999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChH---HHHHHHHh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPI---GMLVGIAT 254 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~---~~~~~~~~ 254 (303)
++||..+... ......|..+|...+.+.+.++..+. +.+.||++.+..... .....+..
T Consensus 143 nisS~~~~~~------------~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~ 210 (251)
T d2c07a1 143 NISSIVGLTG------------NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIIS 210 (251)
T ss_dssp EECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHT
T ss_pred EECCHHhcCC------------CCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHh
Confidence 9999966432 22345577777777777776654433 788899876543211 11111111
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.++ ..-+...+|+|+++++++.+.+
T Consensus 211 ----~~p-----l~R~~~pedvA~~v~fL~S~~s 235 (251)
T d2c07a1 211 ----NIP-----AGRMGTPEEVANLACFLSSDKS 235 (251)
T ss_dssp ----TCT-----TSSCBCHHHHHHHHHHHHSGGG
T ss_pred ----cCC-----CCCCcCHHHHHHHHHHHhCchh
Confidence 111 1126789999999999987554
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=2.8e-18 Score=145.54 Aligned_cols=200 Identities=14% Similarity=0.092 Sum_probs=133.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+++||+++++.|+++|+. |++++|++ +.++++... ..++.++.+|++
T Consensus 4 l~GK~alITGas~GIG~aia~~la~~Ga~---V~i~~r~~------~~~~~~~~~-------------~~~~~~~~~Dvs 61 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRAFVNSGAR---VVICDKDE------SGGRALEQE-------------LPGAVFILCDVT 61 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHHH-------------CTTEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHHh-------------cCCCeEEEccCC
Confidence 57899999999999999999999999997 88889863 233333221 156789999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVH 184 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~ 184 (303)
|.+ ++.++++ ++|++|||||.... ...|...+++|+.++..+.+++.+. ++..++|+
T Consensus 62 ~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~ 135 (250)
T d1ydea1 62 QED------DVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVIN 135 (250)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CHH------HHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcc
Confidence 976 5555443 78999999996421 2346788999999998888777543 12369999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHH-----HHHHHH
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIG-----MLVGIA 253 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~-----~~~~~~ 253 (303)
+||..+... ......|..+|...+.+.+.++..+ . +.|.||++.+...... ......
T Consensus 136 isS~~~~~~------------~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~ 203 (250)
T d1ydea1 136 ISSLVGAIG------------QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASI 203 (250)
T ss_dssp ECCHHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHH
T ss_pred ccccccccc------------ccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHH
Confidence 999966432 2234556667766666666554433 3 7888997754321100 000011
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
.......+ ..-+...+|+|+++++++..
T Consensus 204 ~~~~~~~p-----l~R~g~p~eva~~v~fL~Sd 231 (250)
T d1ydea1 204 REGMLAQP-----LGRMGQPAEVGAAAVFLASE 231 (250)
T ss_dssp HHHHHTST-----TSSCBCHHHHHHHHHHHHHH
T ss_pred HHHHhcCC-----CCCCCCHHHHHHHHHHHhCc
Confidence 11111111 12367899999999998863
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=8.9e-18 Score=145.55 Aligned_cols=204 Identities=21% Similarity=0.166 Sum_probs=120.5
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGLG 126 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~ 126 (303)
|||||||||||++|+++|+++|+. .|+++++-....... .+ . + .. ..|..+..
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~--~V~~~d~~~~~~~~~-~~---~-------------~--~~----~~~~~~~~-- 54 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGTKFV-NL---V-------------D--LN----IADYMDKE-- 54 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCC--CEEEEECCSSGGGGH-HH---H-------------T--SC----CSEEEEHH--
T ss_pred EEEecCccHHHHHHHHHHHhCCCC--eEEEEECCCCcchhh-cc---c-------------c--cc----hhhhccch--
Confidence 899999999999999999999963 277776433321110 00 0 0 01 11111110
Q ss_pred CCHHHHHHH-----hccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC-cccCC-CCccc
Q psy17679 127 LSETDRATL-----VKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA-FTHCP-RERID 198 (303)
Q Consensus 127 ~~~~~~~~~-----~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~-~~~~~-~~~~~ 198 (303)
...... +..+++|+|.|+.... ..+.......|+.++..+++++... +++ +++.||. ..... .....
T Consensus 55 ---~~~~~~~~~~~~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~i~-~v~~ss~~~~~~~~~~~~~ 129 (307)
T d1eq2a_ 55 ---DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EIP-FLYASSAATYGGRTSDFIE 129 (307)
T ss_dssp ---HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TCC-EEEEEEGGGGTTCCSCBCS
T ss_pred ---HHHHHHhhhhcccchhhhhhhcccccccccccccccccccccccccccccccc-ccc-ccccccccccccccccccc
Confidence 011111 2368999999987654 3345567778899999999999987 775 4555555 33222 22333
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc---EEeecceecCccChH------------HHHHHHHhhhhhh-ccC
Q psy17679 199 EEFYPVPLKYENLIQLISETGDEELSEMTPNRV---HISGTGWIDNVYGPI------------GMLVGIATGVLHT-HLI 262 (303)
Q Consensus 199 E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~---~ii~pg~~~~~~g~~------------~~~~~~~~~~~~~-~~~ 262 (303)
++.... +...|..+|..+|.++..+...+. .+++| .++|||. .+...+..+.... ..+
T Consensus 130 ~~~~~~---~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~---~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 203 (307)
T d1eq2a_ 130 SREYEK---PLNVYGYSKFLFDEYVRQILPEANSQIVGFRY---FNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEG 203 (307)
T ss_dssp SGGGCC---CSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEE---CEEESSSCGGGGGGSCHHHHHHHHHHC---------
T ss_pred cccccc---cccccccccchhhhhccccccccccccccccc---eeEeeccccccccccccccccccccccccceeeecC
Confidence 333333 344567778889999998877765 45554 3455542 1233344444333 356
Q ss_pred CCCccccceehhHHHHHHHHHHhhcc
Q psy17679 263 NLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 263 ~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
++...++|+|++|+++++..++.++.
T Consensus 204 ~~~~~r~~~~v~d~~~~~~~~~~~~~ 229 (307)
T d1eq2a_ 204 SENFKRDFVYVGDVADVNLWFLENGV 229 (307)
T ss_dssp ----CBCEEEHHHHHHHHHHHHHHCC
T ss_pred ccceeeeeeecccHHHHHHHHhhhcc
Confidence 77888999999999999999988764
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.75 E-value=5.2e-18 Score=144.84 Aligned_cols=210 Identities=11% Similarity=0.055 Sum_probs=137.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+++||+++++.|.+.|+. |++++|++.. .+.+.+.+. ....++.++.+|++
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~---V~~~~r~~~~---l~~~~~~~~------------~~g~~~~~~~~Dv~ 64 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGTA---IALLDMNREA---LEKAEASVR------------EKGVEARSYVCDVT 64 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHH------------TTTSCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHH------------hcCCcEEEEEccCC
Confidence 57899999999999999999999999997 8889986421 222221111 11257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+.+ ++..+++ ++|++|||||.... ...|...+++|+.++..+.+++.+. ++..++|
T Consensus 65 ~~~------~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II 138 (260)
T d1zema1 65 SEE------AVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIV 138 (260)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCC
Confidence 976 4444443 79999999997432 2346788999999998888777543 2567999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+.. +...+..|..+|...+.+.+.++..+. +.+.||++.+.+-.............
T Consensus 139 ~isS~~~~~------------~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~ 206 (260)
T d1zema1 139 NTASMAGVK------------GPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGS 206 (260)
T ss_dssp EECCHHHHS------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTC
T ss_pred eeechhhcc------------CCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcc
Confidence 999996653 222445677777777777766554433 78889987654422111111100000
Q ss_pred h-----------hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 H-----------THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~-----------~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. ..... ....-+...+|+|+++++++.+.+
T Consensus 207 ~~~~~~~~~~~~~~~~~-~Pl~R~g~pedvA~~v~fL~S~~s 247 (260)
T d1zema1 207 QYFSTDPKVVAQQMIGS-VPMRRYGDINEIPGVVAFLLGDDS 247 (260)
T ss_dssp TTSCSSHHHHHHHHHHT-STTSSCBCGGGSHHHHHHHHSGGG
T ss_pred cccccCHHHHHHHHHhc-CCCCCCcCHHHHHHHHHHHhCchh
Confidence 0 00000 001225678999999999987543
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.75 E-value=3.1e-17 Score=139.23 Aligned_cols=206 Identities=12% Similarity=0.038 Sum_probs=135.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
-+++|++|||||+++||+++++.|++.|+. |.+.+|+.+ .++++... + ....++.++.+|+
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~Ga~---V~~~~r~~~------~~~~~~~~-----~-----~~~~~~~~~~~Dv 63 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAK---VMITGRHSD------VGEKAAKS-----V-----GTPDQIQFFQHDS 63 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----H-----CCTTTEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-----h-----CCCCcEEEEEccC
Confidence 478899999999999999999999999997 888898642 22222111 0 1125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCC-ceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDL-KAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~-~r~ 182 (303)
+|.+ ++..+++ ++|++|||||.... ...|...+++|+.++..+.+++.+. ++. .++
T Consensus 64 ~~~~------~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~I 137 (251)
T d1zk4a1 64 SDED------GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASI 137 (251)
T ss_dssp TCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCce
Confidence 9976 4444443 78999999998542 3456789999999999888877543 133 489
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhC------cCCc--EEeecceecCccChHHHHHHHHh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMT------PNRV--HISGTGWIDNVYGPIGMLVGIAT 254 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~------~~~~--~ii~pg~~~~~~g~~~~~~~~~~ 254 (303)
|++||..+.. +......|..+|...+.+.+.++ +... +.|.||++.+.......-.....
T Consensus 138 i~isS~~~~~------------~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~ 205 (251)
T d1zk4a1 138 INMSSIEGFV------------GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAM 205 (251)
T ss_dssp EEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHH
T ss_pred Eeeeccceec------------cCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHH
Confidence 9999997653 22234567777777776666443 2222 67889977543211100000000
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....+ ...-+...+|+|+++++++...+
T Consensus 206 ~~~~~~-----pl~R~~~pedvA~~v~fL~S~~s 234 (251)
T d1zk4a1 206 SQRTKT-----PMGHIGEPNDIAYICVYLASNES 234 (251)
T ss_dssp TSTTTC-----TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhCC-----CCCCCcCHHHHHHHHHHHhCchh
Confidence 000011 11236789999999999886543
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.75 E-value=1.4e-17 Score=141.77 Aligned_cols=207 Identities=14% Similarity=0.072 Sum_probs=136.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+++||+++++.|+++|+. |.+.+|+. +.++++... ...++.++.+|++
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~---V~~~~r~~------~~l~~~~~~------------~~~~~~~~~~Dvt 61 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREGAR---VAIADINL------EAARATAAE------------IGPAACAIALDVT 61 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTTEE---EEEEESCH------HHHHHHHHH------------HCTTEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHHH------------hCCceEEEEeeCC
Confidence 57899999999999999999999999987 88889863 233332221 1257889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc----CCCceEE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM----KDLKAFV 183 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~----~~~~r~i 183 (303)
+++ ++.++++ ++|++|||||.... .+.|...+++|+.++..+.+.+... +...+||
T Consensus 62 ~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv 135 (256)
T d1k2wa_ 62 DQA------SIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKII 135 (256)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CHH------HHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccc
Confidence 977 5555543 78999999997542 3456788999999998888765432 2346899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHh--h
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIAT--G 255 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~--~ 255 (303)
++||..+.. +...+..|..+|...+.+.+.++..+. +.+.||++.+...... ...... +
T Consensus 136 ~isS~~~~~------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~-~~~~~~~~~ 202 (256)
T d1k2wa_ 136 NMASQAGRR------------GEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGV-DAKFADYEN 202 (256)
T ss_dssp EECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHH-HHHHHHHHT
T ss_pred cccchhhcc------------ccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhh-hhhhhhhcc
Confidence 999997653 223445677777777777765554332 7888998765542211 111000 0
Q ss_pred h----hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 V----LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~----~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. ....+.......-+...+|+|+++++++...+
T Consensus 203 ~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~a 239 (256)
T d1k2wa_ 203 LPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEA 239 (256)
T ss_dssp CCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGGG
T ss_pred CChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 0 00000000001225788999999999876543
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.75 E-value=7.3e-18 Score=143.76 Aligned_cols=207 Identities=14% Similarity=0.151 Sum_probs=124.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+++||+++++.|++.|+. |++++|++.. ..+..+++.. ...++.++.+|+
T Consensus 5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~---V~~~~r~~~~--l~~~~~~~~~-------------~~~~~~~~~~Dv 66 (259)
T d1xq1a_ 5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAV---IHTCARNEYE--LNECLSKWQK-------------KGFQVTGSVCDA 66 (259)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHHH--HHHHHHHHHH-------------TTCCEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHH--HHHHHHHHHh-------------cCCceEEEeccC
Confidence 478999999999999999999999999997 8889996431 1111222211 125788999999
Q ss_pred CCCCCCCCHHHHHHHh--------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceE
Q psy17679 121 SLPGLGLSETDRATLV--------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~--------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~ 182 (303)
++.+ ++.+++ ..+|++|||||.... ...|...+++|+.++..+.+.+.+. ++..+|
T Consensus 67 ~~~~------~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~I 140 (259)
T d1xq1a_ 67 SLRP------EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNI 140 (259)
T ss_dssp TSHH------HHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccc
Confidence 9876 343332 258999999997542 3456789999999998888777543 255799
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhh
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGV 256 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~ 256 (303)
|++||..+... ......|..+|...+.+.+.++..+ . +.+.||++.+.............
T Consensus 141 v~isS~~~~~~------------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~-- 206 (259)
T d1xq1a_ 141 IFMSSIAGVVS------------ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKK-- 206 (259)
T ss_dssp EEEC----------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------
T ss_pred ccccccccccc------------ccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHH--
Confidence 99999966432 1223456666666666666554433 2 78889987554322111111100
Q ss_pred hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 257 LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 257 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+.......-+...+|+|+++++++.+.+
T Consensus 207 ---~~~~~~pl~R~~~pedvA~~v~fL~S~~s 235 (259)
T d1xq1a_ 207 ---VVISRKPLGRFGEPEEVSSLVAFLCMPAA 235 (259)
T ss_dssp --------------CCGGGGHHHHHHHTSGGG
T ss_pred ---HHHhCCCCCCCcCHHHHHHHHHHHhCchh
Confidence 00000111225678999999999886543
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.74 E-value=1.2e-17 Score=141.81 Aligned_cols=204 Identities=14% Similarity=0.090 Sum_probs=135.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|+++||||+++||+++++.|+++|+. |++.+|++. .++++.+. ...+..++.+|+
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga~---V~~~~~~~~------~~~~~~~~------------~~~~~~~~~~Dv 61 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAK---VAFSDINEA------AGQQLAAE------------LGERSMFVRHDV 61 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECSCHH------HHHHHHHH------------HCTTEEEECCCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH------------hCCCeEEEEeec
Confidence 478899999999999999999999999997 888888632 23222221 125778899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVH 184 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~ 184 (303)
++.+ ++..+++ ++|++|||||.... ...|...+++|+.++..+.+.+.+. .+..+||+
T Consensus 62 ~~~~------~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~ 135 (253)
T d1hxha_ 62 SSEA------DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIIN 135 (253)
T ss_dssp TCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceec
Confidence 9876 4444433 78999999997532 2456789999999988888777653 13478999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC------c--EEeecceecCccChHHHHHHHHh-h
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR------V--HISGTGWIDNVYGPIGMLVGIAT-G 255 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~------~--~ii~pg~~~~~~g~~~~~~~~~~-~ 255 (303)
+||..+.. +......|..+|...+.+.+.++..+ . +.+.||++.+.. ...... +
T Consensus 136 isS~~~~~------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~-----~~~~~~~~ 198 (253)
T d1hxha_ 136 MASVSSWL------------PIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM-----MQASLPKG 198 (253)
T ss_dssp ECCGGGTS------------CCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH-----HHHHSCTT
T ss_pred ccchhhhc------------CccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHh-----HHhhCcch
Confidence 99997653 23344567777776776666544222 2 678899775432 111111 0
Q ss_pred hhhhccC---CCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 VLHTHLI---NLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~~~~~~~---~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....... .....-.+...+|+|+++++++.+.+
T Consensus 199 ~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s 234 (253)
T d1hxha_ 199 VSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDES 234 (253)
T ss_dssp CCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGG
T ss_pred hhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhh
Confidence 0000000 00111236788999999999987543
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.74 E-value=4.5e-17 Score=138.56 Aligned_cols=208 Identities=13% Similarity=0.034 Sum_probs=133.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|.+|||||+++||+++++.|+++|+. |.+.+|++.. ..+..+++.. ...++.++.+|+++.
T Consensus 1 KKValITGas~GIG~aia~~la~~Ga~---V~~~~r~~~~--l~~~~~~i~~-------------~g~~~~~~~~Dv~~~ 62 (255)
T d1gega_ 1 KKVALVTGAGQGIGKAIALRLVKDGFA---VAIADYNDAT--AKAVASEINQ-------------AGGHAVAVKVDVSDR 62 (255)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH--HHHHHHHHHH-------------TTCCEEEEECCTTSH
T ss_pred CCEEEEcCCccHHHHHHHHHHHHCCCE---EEEEECCHHH--HHHHHHHHHh-------------cCCcEEEEEeeCCCH
Confidence 356799999999999999999999997 8889996431 1111122211 125788999999997
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHh----cCCCceEEEE
Q psy17679 124 GLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLARE----MKDLKAFVHV 185 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~----~~~~~r~i~i 185 (303)
+ ++..+++ ++|++|||||.... ...|...+++|+.++..+.+++.+ .+...++|++
T Consensus 63 ~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~i 136 (255)
T d1gega_ 63 D------QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINA 136 (255)
T ss_dssp H------HHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred H------HHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccc
Confidence 7 4554433 79999999997542 234678999999999888877644 2234679999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHh--hhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIAT--GVL 257 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~--~~~ 257 (303)
||..+.. +...+..|..+|...+.+.+.++..+ . +.+.||++.+...... ...... +..
T Consensus 137 sS~~~~~------------~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~~ 203 (255)
T d1gega_ 137 CSQAGHV------------GNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEI-DRQVSEAAGKP 203 (255)
T ss_dssp CCGGGTS------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHH-HHHHHHHHTCC
T ss_pred cchhhcc------------cCcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhh-hhhhHhhhccc
Confidence 9986643 23345567777777777766554333 2 7888997754332111 111000 000
Q ss_pred ----hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 ----HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ----~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..-+........+...+|+|+++++++.+.+
T Consensus 204 ~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a 238 (255)
T d1gega_ 204 LGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDS 238 (255)
T ss_dssp TTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred chhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 0000000111236789999999999987543
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.74 E-value=4.1e-17 Score=138.98 Aligned_cols=207 Identities=12% Similarity=0.090 Sum_probs=136.4
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|++|||||+++||+++++.|+++|+. |++.+|++.. ..+..+++.. ...++.++.+|++|.
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~---V~i~~r~~~~--l~~~~~~l~~-------------~g~~~~~~~~Dvs~~ 63 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLR---VFVCARGEEG--LRTTLKELRE-------------AGVEADGRTCDVRSV 63 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHHH--HHHHHHHHHH-------------TTCCEEEEECCTTCH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHH--HHHHHHHHHh-------------cCCcEEEEEeecCCH
Confidence 688999999999999999999999997 8888996421 1111222211 125788999999997
Q ss_pred CCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-----CCCceEEE
Q psy17679 124 GLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-----KDLKAFVH 184 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-----~~~~r~i~ 184 (303)
+ ++.++++ ++|++|||||.... .+.|...+++|+.++..+.+++.+. ++..++|+
T Consensus 64 ~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~ 137 (257)
T d2rhca1 64 P------EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVN 137 (257)
T ss_dssp H------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEE
T ss_pred H------HHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccc
Confidence 7 4554443 78999999997542 3456789999999999999888652 24568999
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHh--h-
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIAT--G- 255 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~--~- 255 (303)
+||..+.. +......|..+|.....+.+.++..+. +.+.||++.+..... ....... +
T Consensus 138 i~S~~~~~------------~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~-~~~~~~~~~~~ 204 (257)
T d2rhca1 138 IASTGGKQ------------GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS-VREHYSDIWEV 204 (257)
T ss_dssp ECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHH-HHHHHHHHTTC
T ss_pred cccccccc------------ccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHH-HHhhhhhhccc
Confidence 99996653 222445677777777777766554433 678899775433211 1000000 0
Q ss_pred h----hhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 256 V----LHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 256 ~----~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. ...+. ......-+...+|+|+++++++.+.+
T Consensus 205 ~~~e~~~~~~-~~~PlgR~~~pedia~~v~fL~S~~s 240 (257)
T d2rhca1 205 STEEAFDRIT-ARVPIGRYVQPSEVAEMVAYLIGPGA 240 (257)
T ss_dssp CHHHHHHHHH-TTSTTSSCBCHHHHHHHHHHHTSGGG
T ss_pred ChHHHHHHHH-hcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 0 00000 00111236789999999999986543
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.74 E-value=6.2e-17 Score=136.36 Aligned_cols=197 Identities=13% Similarity=0.123 Sum_probs=132.6
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCc----cEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHL----KHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v----~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
..||||||+++||+++++.|.+.|+.+ ..|.+.+|+.. +++++... +. ....++.++.+|+
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~------~l~~~~~~-----~~----~~g~~~~~~~~Dv 66 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAA------DLEKISLE-----CR----AEGALTDTITADI 66 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHH------HHHHHHHH-----HH----TTTCEEEEEECCT
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHH------HHHHHHHH-----HH----hcCCcEEEEEecC
Confidence 458999999999999999999999862 13677777632 22222111 00 1125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ ++.++++ ++|++|||||.... ...|...+++|+.++..+.+.+.+. ++..++|
T Consensus 67 t~~~------~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii 140 (240)
T d2bd0a1 67 SDMA------DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIF 140 (240)
T ss_dssp TSHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceE
Confidence 9976 4554443 68999999998542 3456789999999988887777543 2557999
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhh----CcCCc--EEeecceecCccChHHHHHHHHhhhh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEM----TPNRV--HISGTGWIDNVYGPIGMLVGIATGVL 257 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~----~~~~~--~ii~pg~~~~~~g~~~~~~~~~~~~~ 257 (303)
++||..+... ......|..+|...+.+.+.+ .+... +.+.||++.+.+..
T Consensus 141 ~isS~~~~~~------------~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~------------ 196 (240)
T d2bd0a1 141 FITSVAATKA------------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG------------ 196 (240)
T ss_dssp EECCGGGTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC------------
T ss_pred EEechhhcCC------------CCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhh------------
Confidence 9999976532 223456777776666666554 33333 78889987554311
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhccc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIGE 289 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 289 (303)
.+. ......+...+|+|+++++++.+++.
T Consensus 197 -~~~--~~~~~~~~~PedvA~~v~~l~s~~~~ 225 (240)
T d2bd0a1 197 -KVD--DEMQALMMMPEDIAAPVVQAYLQPSR 225 (240)
T ss_dssp -CCC--STTGGGSBCHHHHHHHHHHHHTSCTT
T ss_pred -hcC--HhhHhcCCCHHHHHHHHHHHHcCCcc
Confidence 011 11122356789999999999987654
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.73 E-value=7.9e-17 Score=135.25 Aligned_cols=198 Identities=14% Similarity=0.095 Sum_probs=131.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+++||+++++.|++.|++ |++.+|+.+ .+++ ....++.+|++
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~---V~~~~r~~~------~l~~------------------~~~~~~~~Dv~ 54 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAE---VTICARNEE------LLKR------------------SGHRYVVCDLR 54 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHH------------------TCSEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHh------------------cCCcEEEcchH
Confidence 57899999999999999999999999997 889998632 2211 35567889988
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCCccc
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTAFTH 191 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~~~~ 191 (303)
+. ...+.+.+.++|++|||||.... ...|...+++|+.++..+.+.+.+. ++..++|++||..+.
T Consensus 55 ~~-----~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~ 129 (234)
T d1o5ia_ 55 KD-----LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVI 129 (234)
T ss_dssp TC-----HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred HH-----HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccc
Confidence 63 23455556699999999997532 2346778899999988887766543 255789999998654
Q ss_pred CCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhhhccCCCC
Q psy17679 192 CPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLHTHLINLN 265 (303)
Q Consensus 192 ~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 265 (303)
. +......|..+|...+.+.+.++..+ . +.+.||++.+.......-..........+
T Consensus 130 ~------------~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~----- 192 (234)
T d1o5ia_ 130 S------------PIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQI----- 192 (234)
T ss_dssp S------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTS-----
T ss_pred c------------cccccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcC-----
Confidence 3 22334456666776666666554433 3 68889987654422111011111111111
Q ss_pred ccccceehhHHHHHHHHHHhhcc
Q psy17679 266 TVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 266 ~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....+...+|+|+++++++.+.+
T Consensus 193 pl~R~~~pediA~~v~fL~S~~s 215 (234)
T d1o5ia_ 193 PMRRMAKPEEIASVVAFLCSEKA 215 (234)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred CCCCCcCHHHHHHHHHHHhChhh
Confidence 11236789999999999887543
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=3.9e-17 Score=137.85 Aligned_cols=196 Identities=15% Similarity=0.124 Sum_probs=136.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+.+|+++||||+++||++++++|++.|+. |++.+|+.. +++++...- . ....++.++.+|+
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~---V~l~~r~~~------~l~~~~~~~-----~----~~~~~~~~~~~Dv 65 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSK---LVLWDINKH------GLEETAAKC-----K----GLGAKVHTFVVDC 65 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHHH-----H----HTTCCEEEEECCT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHHH-----H----hcCCcEEEEEeeC
Confidence 378899999999999999999999999997 999999743 222222110 0 1126788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
+|.+ .+..+++ .+|++|||||.... ...++..+++|+.++..+.+.+.+. ++..+||
T Consensus 66 s~~~------~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv 139 (244)
T d1yb1a_ 66 SNRE------DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIV 139 (244)
T ss_dssp TCHH------HHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEE
Confidence 9987 4444432 79999999998643 2345688999999998888777553 3567899
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcC-------Cc--EEeecceecCccChHHHHHHHHh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPN-------RV--HISGTGWIDNVYGPIGMLVGIAT 254 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~-------~~--~ii~pg~~~~~~g~~~~~~~~~~ 254 (303)
++||..+.. |...+..|..+|.....+.+.++.. .. +.+.||++.+.+-.
T Consensus 140 ~isS~~~~~------------~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~--------- 198 (244)
T d1yb1a_ 140 TVASAAGHV------------SVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK--------- 198 (244)
T ss_dssp EECCCC-CC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT---------
T ss_pred EeecchhcC------------CCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhh---------
Confidence 999997653 3445677888888888887766532 22 67889866433211
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.... ....++..+++|+.++..+....
T Consensus 199 ~~~~-------~~~~~~~pe~va~~i~~~~~~~~ 225 (244)
T d1yb1a_ 199 NPST-------SLGPTLEPEEVVNRLMHGILTEQ 225 (244)
T ss_dssp CTHH-------HHCCCCCHHHHHHHHHHHHHTTC
T ss_pred CcCc-------cccCCCCHHHHHHHHHHHHhcCC
Confidence 1000 11124567899999998776553
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.73 E-value=2.1e-17 Score=140.46 Aligned_cols=212 Identities=8% Similarity=0.025 Sum_probs=135.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+||||||+++||..++++|+++|+. |++++|....... ++++... ....++.++.+|++
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~G~~---vii~~r~~~~~~~---~~~~~~~-----------~~~~~~~~~~~d~~ 65 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKRNLK---NFVILDRVENPTA---LAELKAI-----------NPKVNITFHTYDVT 65 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCS---EEEEEESSCCHHH---HHHHHHH-----------CTTSEEEEEECCTT
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCE---EEEEECCcccHHH---HHHHHhh-----------CCCCCEEEEEeecC
Confidence 67899999999999999999999999998 8888887654332 2222221 11258889999998
Q ss_pred CCCCCC--CHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhc------CCCceEEEEeCCcccCC
Q psy17679 122 LPGLGL--SETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREM------KDLKAFVHVSTAFTHCP 193 (303)
Q Consensus 122 d~~~~~--~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~------~~~~r~i~iSS~~~~~~ 193 (303)
...... -.....+.+.++|++|||||... ...++..+++|+.++..+.+++.+. +...++|++||..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~-~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~- 143 (254)
T d1sbya1 66 VPVAESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN- 143 (254)
T ss_dssp SCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEeCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc-
Confidence 532100 01111122237999999999754 5668899999999998888877653 1246799999997753
Q ss_pred CCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHhhhhhhccCCCCcc
Q psy17679 194 RERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIATGVLHTHLINLNTV 267 (303)
Q Consensus 194 ~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 267 (303)
|...+..|..+|.....+.+.++..+. +.|.||++.+.+.....-..-........ ...
T Consensus 144 -----------~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~----~~~ 208 (254)
T d1sbya1 144 -----------AIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAEL----LLS 208 (254)
T ss_dssp -----------CCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHH----HTT
T ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhc----ccc
Confidence 333455677777777777776655443 67789977443210000000000000000 111
Q ss_pred ccceehhHHHHHHHHHHhhc
Q psy17679 268 TDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 268 ~~~i~v~D~a~ai~~~~~~~ 287 (303)
+.....+++|++++.++...
T Consensus 209 ~~~~~~e~va~~~~~~~~~~ 228 (254)
T d1sbya1 209 HPTQTSEQCGQNFVKAIEAN 228 (254)
T ss_dssp SCCEEHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHhhhCC
Confidence 23458899999999888654
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.73 E-value=4.4e-17 Score=139.59 Aligned_cols=205 Identities=15% Similarity=0.164 Sum_probs=135.0
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
-+++|++|||||+++||+++++.|+++|+. |++++|+.. ++++.... + .....+.++.+|+
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga~---V~i~~r~~~------~~~~~~~~-----l-----~~~~~~~~~~~Dv 63 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAK---VVIADIADD------HGQKVCNN-----I-----GSPDVISFVHCDV 63 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----H-----CCTTTEEEEECCT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-----h-----cCCCceEEEEccC
Confidence 478899999999999999999999999997 888998642 22222211 0 1124678899999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc---------cccHHHHHhhhHHHHHHHHHHHHhc---CCCce
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF---------DEHIKMAVKINVCGVQAMLQLAREM---KDLKA 181 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~---------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r 181 (303)
++.+ ++..+++ ++|++|||||.... ...|...+++|+.++..+.+.+.+. ++..+
T Consensus 64 ~~~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ 137 (268)
T d2bgka1 64 TKDE------DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGS 137 (268)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEE
T ss_pred CCHH------HHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCC
Confidence 9976 4555443 78999999997432 1346788999999988888777543 25568
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCcc-----ChH-HHH
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVY-----GPI-GML 249 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~-----g~~-~~~ 249 (303)
+|++||..+..... + ....|..+|...+.+.+.++..+. +.|.||++.+.. +.. ...
T Consensus 138 ii~iss~~~~~~~~---------~--~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~ 206 (268)
T d2bgka1 138 IVFTASISSFTAGE---------G--VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRV 206 (268)
T ss_dssp EEEECCGGGTCCCT---------T--SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHH
T ss_pred cccccccccccccc---------c--cccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHH
Confidence 99999996543211 1 123466677777777665544433 788899875432 211 111
Q ss_pred HHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 250 VGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....... .. ....+...+|+|+++++++.+.+
T Consensus 207 ~~~~~~~-~~------~~gr~~~pedvA~~v~fL~S~~s 238 (268)
T d2bgka1 207 EELAHQA-AN------LKGTLLRAEDVADAVAYLAGDES 238 (268)
T ss_dssp HHHHHHT-CS------SCSCCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHhc-cc------cCCCCcCHHHHHHHHHHHhChhh
Confidence 1111111 01 11125689999999999987543
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=1e-16 Score=136.43 Aligned_cols=206 Identities=15% Similarity=0.138 Sum_probs=135.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHH-HHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
.+++|++|||||+++||.++++.|+++|+. |++.+|+... .+.+ +++... ....++.++++|
T Consensus 7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~---Vv~~~r~~~~---l~~~~~~l~~~-----------~~~~~~~~~~~D 69 (257)
T d1xg5a_ 7 RWRDRLALVTGASGGIGAAVARALVQQGLK---VVGCARTVGN---IEELAAECKSA-----------GYPGTLIPYRCD 69 (257)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHHT-----------TCSSEEEEEECC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHHhc-----------CCCceEEEEEcc
Confidence 378899999999999999999999999997 8888886421 2222 112111 112478899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHh----cC-CCc
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLARE----MK-DLK 180 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~----~~-~~~ 180 (303)
+++++ ++.++++ ++|++|||||.... ...+...+++|+.+...+.+.+.+ .+ +..
T Consensus 70 ls~~~------~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g 143 (257)
T d1xg5a_ 70 LSNEE------DILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDG 143 (257)
T ss_dssp TTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSC
T ss_pred CCCHH------HHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCC
Confidence 99976 4555443 78999999998532 345678889999998887666543 21 246
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCc------CCc--EEeecceecCccChHH---HH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTP------NRV--HISGTGWIDNVYGPIG---ML 249 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~------~~~--~ii~pg~~~~~~g~~~---~~ 249 (303)
++|++||..+... .|......|..+|...+.+.+.++. ... +.+.||.+.+.+.... ..
T Consensus 144 ~Ii~isS~~~~~~----------~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~ 213 (257)
T d1xg5a_ 144 HIININSMSGHRV----------LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP 213 (257)
T ss_dssp EEEEECCGGGTSC----------CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH
T ss_pred ceEEEechHhcCC----------CCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhH
Confidence 8999999976432 1333455677777777777765542 222 6778986654432111 00
Q ss_pred HHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 250 VGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..... ..+ ...++..+|+|+++++++.+++
T Consensus 214 ~~~~~----~~~-----~~r~~~pedvA~~v~fL~s~~a 243 (257)
T d1xg5a_ 214 EKAAA----TYE-----QMKCLKPEDVAEAVIYVLSTPA 243 (257)
T ss_dssp HHHHH----HHC--------CBCHHHHHHHHHHHHHSCT
T ss_pred HHHHh----cCC-----CCCCcCHHHHHHHHHHHhCChh
Confidence 11111 111 1225789999999999988764
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.72 E-value=5.7e-17 Score=136.95 Aligned_cols=202 Identities=14% Similarity=0.129 Sum_probs=131.0
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
+.||||||+++||++++++|+++|+. |.+.++... ...+.+.+.... ...++.++.+|+++.+
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~---V~i~~~~~~--~~~~~~~~~~~~------------~g~~~~~~~~Dv~~~~ 64 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCK---VLVNYARSA--KAAEEVSKQIEA------------YGGQAITFGGDVSKEA 64 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCH--HHHHHHHHHHHH------------HTCEEEEEECCTTSHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCCH--HHHHHHHHHHHH------------cCCcEEEEeCCCCCHH
Confidence 47999999999999999999999998 766554322 112222222111 1257889999999976
Q ss_pred CCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeC
Q psy17679 125 LGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVST 187 (303)
Q Consensus 125 ~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS 187 (303)
++.++++ ++|++|||||.... ...|...+++|+.++..+.+.+.+. ++..+||++||
T Consensus 65 ------~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS 138 (244)
T d1edoa_ 65 ------DVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIAS 138 (244)
T ss_dssp ------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred ------HHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcC
Confidence 4554443 78999999998542 3456789999999988887777543 25679999999
Q ss_pred CcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHhhhhhhcc
Q psy17679 188 AFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIATGVLHTHL 261 (303)
Q Consensus 188 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~ 261 (303)
..+.. +......|..+|...+.+.+.++..+. +.+.||++.+..... +............+
T Consensus 139 ~~~~~------------~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~p 205 (244)
T d1edoa_ 139 VVGLI------------GNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGTIP 205 (244)
T ss_dssp THHHH------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCHHHHHHHHTSCT
T ss_pred hhhcC------------CCCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHH-hhHHHHHHHHhcCC
Confidence 96642 222345677777777777766654432 788899775432111 00011111111111
Q ss_pred CCCCccccceehhHHHHHHHHHHhhc
Q psy17679 262 INLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 262 ~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
..-+...+|+|+++++++.++
T Consensus 206 -----l~R~~~p~dvA~~v~fLa~S~ 226 (244)
T d1edoa_ 206 -----LGRTGQPENVAGLVEFLALSP 226 (244)
T ss_dssp -----TCSCBCHHHHHHHHHHHHHCS
T ss_pred -----CCCCcCHHHHHHHHHHHHCCc
Confidence 123578899999999986544
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=6.7e-17 Score=139.65 Aligned_cols=214 Identities=12% Similarity=0.075 Sum_probs=137.4
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|.||||||+++||+++++.|.+.|..+..|....|+..... ++.+.... ......++.++.+|++|.
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~---~l~~~~~~---------~~~~~~~~~~~~~Dv~~~ 69 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQG---RLWEAARA---------LACPPGSLETLQLDVRDS 69 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTH---HHHHHHHH---------TTCCTTSEEEEECCTTCH
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhH---HHHHHHHH---------HhccCCceEEEeccccch
Confidence 477899999999999999999999998766777777643322 22221111 011236889999999997
Q ss_pred CCCCCHHHHHHHhc-----cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCC
Q psy17679 124 GLGLSETDRATLVK-----QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTA 188 (303)
Q Consensus 124 ~~~~~~~~~~~~~~-----~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~ 188 (303)
+ ++..+++ .+|+++||||.... ...+...+++|+.++.++.+++.+. ++..++|++||.
T Consensus 70 ~------~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~ 143 (285)
T d1jtva_ 70 K------SVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSV 143 (285)
T ss_dssp H------HHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEG
T ss_pred H------hhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEech
Confidence 7 5655553 68999999998543 2346778999999998888777543 256799999999
Q ss_pred cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH------HHH-------
Q psy17679 189 FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI------GML------- 249 (303)
Q Consensus 189 ~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~------~~~------- 249 (303)
.+.. |......|..+|...+.+.+.++..+ . +.+.||++.+.+-.. ...
T Consensus 144 ~g~~------------~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~ 211 (285)
T d1jtva_ 144 GGLM------------GLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHT 211 (285)
T ss_dssp GGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHH
T ss_pred hhcC------------CCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhH
Confidence 7653 23344567777777777766554443 3 788899875433111 100
Q ss_pred -HHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcccC
Q psy17679 250 -VGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 250 -~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
......... . ..-........+|+|++++.++..+.+.
T Consensus 212 ~~~~~~~~~~--~-~~~~~~~~~~PeeVA~~v~~~~~~~~p~ 250 (285)
T d1jtva_ 212 FHRFYQYLAH--S-KQVFREAAQNPEEVAEVFLTALRAPKPT 250 (285)
T ss_dssp HHHHHHHHHH--H-HHHHHHHCBCHHHHHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHH--H-hhhhcccCCCHHHHHHHHHHHHhCCCCC
Confidence 000000000 0 0000112457899999999999877544
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.72 E-value=1e-16 Score=135.10 Aligned_cols=198 Identities=13% Similarity=0.047 Sum_probs=134.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+++||+++++.|+++|+. |++..|+.+ ++++..+ +...++.++++|++
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~---V~~~~r~~~------~~~~~~~------------~~~~~~~~~~~Dls 61 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGAS---LVAVDREER------LLAEAVA------------ALEAEAIAVVADVS 61 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHH------------TCCSSEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHH------------HcCCceEEEEecCC
Confidence 67899999999999999999999999998 889999743 2322222 12357889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhcC-CCceEEEEe
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREMK-DLKAFVHVS 186 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~~-~~~r~i~iS 186 (303)
+++ ++.++++ ++|++||||+.... ...|...+++|+.+...+.+++.+.- +...++++|
T Consensus 62 ~~~------~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~s 135 (241)
T d2a4ka1 62 DPK------AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTG 135 (241)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CHH------HHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecc
Confidence 877 4544443 79999999997532 23467888999999999998887652 233445444
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChH---HHHHHHHhhhh
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPI---GMLVGIATGVL 257 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~---~~~~~~~~~~~ 257 (303)
|.+.. +...+..|..+|...+.+.+.++..+. +.|.||.+.+.+... .........
T Consensus 136 s~a~~-------------~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~-- 200 (241)
T d2a4ka1 136 SVAGL-------------GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGA-- 200 (241)
T ss_dssp CCTTC-------------CHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHT--
T ss_pred ccccc-------------cccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhC--
Confidence 44322 223456677788878887776654443 788899876544221 122222111
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+ ...+...+|+|+++++++.+.+
T Consensus 201 --~p-----~~r~~~p~dva~~v~fL~S~~s 224 (241)
T d2a4ka1 201 --SP-----LGRAGRPEEVAQAALFLLSEES 224 (241)
T ss_dssp --ST-----TCSCBCHHHHHHHHHHHHSGGG
T ss_pred --CC-----CCCCcCHHHHHHHHHHHhcchh
Confidence 11 1235689999999999997543
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=5.1e-17 Score=137.34 Aligned_cols=209 Identities=10% Similarity=0.070 Sum_probs=136.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||++.||+++++.|++.|++ |++.+|++. +++++.+ ...+....+|+.
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~---Vi~~~r~~~------~l~~~~~--------------~~~~~~~~~d~~ 60 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAK---VIATDINES------KLQELEK--------------YPGIQTRVLDVT 60 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHGGGGG--------------STTEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEeCCHH------HHHHHHh--------------ccCCceeeeecc
Confidence 78899999999999999999999999997 889999632 2222211 256777888876
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCCccc
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTAFTH 191 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~~~~ 191 (303)
+.+ ........+.++|++||+||.... .+.|...+++|+.++..+.+.+.+. ++..++|++||..+.
T Consensus 61 ~~~---~~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~ 137 (245)
T d2ag5a1 61 KKK---QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS 137 (245)
T ss_dssp CHH---HHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT
T ss_pred ccc---cccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc
Confidence 644 112222333489999999998643 2356788999999998888777642 255689999998553
Q ss_pred CCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHhhh-hhhccCCC
Q psy17679 192 CPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIATGV-LHTHLINL 264 (303)
Q Consensus 192 ~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~~~-~~~~~~~~ 264 (303)
. .+...+..|..+|...+.+.+.++..+. +.+.||.+.+............... ...+.. .
T Consensus 138 ~-----------~~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~ 205 (245)
T d2ag5a1 138 V-----------KGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLK-R 205 (245)
T ss_dssp T-----------BCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHH-T
T ss_pred c-----------CCccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHh-c
Confidence 2 1334566788888878887776655543 6788997754332111000000000 000000 0
Q ss_pred CccccceehhHHHHHHHHHHhhcc
Q psy17679 265 NTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 265 ~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
....-+...+|+|+++.+++.+.+
T Consensus 206 ~pl~R~~~pedva~~v~fL~s~~s 229 (245)
T d2ag5a1 206 QKTGRFATAEEIAMLCVYLASDES 229 (245)
T ss_dssp CTTSSCEEHHHHHHHHHHHHSGGG
T ss_pred CCCCCCcCHHHHHHHHHHHhChhh
Confidence 111236789999999999987654
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.71 E-value=2.5e-17 Score=140.89 Aligned_cols=209 Identities=12% Similarity=0.106 Sum_probs=130.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+++||++++++|+++|+. |++++|+.... .+..+++...+ ....++.++.+|++
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga~---V~~~~r~~~~l--~~~~~~l~~~~----------~~~~~~~~~~~Dvt 67 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGAK---VTITGRHAERL--EETRQQILAAG----------VSEQNVNSVVADVT 67 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHTT----------CCGGGEEEEECCTT
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCE---EEEEECCHHHH--HHHHHHHHhcC----------CCcCceEEEEccCC
Confidence 57899999999999999999999999998 88999974321 11112222111 01146889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc--CCCce
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM--KDLKA 181 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r 181 (303)
+.+ ++.++++ ++|++|||||.... .+.|...+++|+.++..+.+++.+. .+..+
T Consensus 68 ~~~------~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~ 141 (264)
T d1spxa_ 68 TDA------GQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGE 141 (264)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CHH------HHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCc
Confidence 976 4555443 78999999997421 2346788999999998888777653 12346
Q ss_pred EEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHH-----H-
Q psy17679 182 FVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGM-----L- 249 (303)
Q Consensus 182 ~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~-----~- 249 (303)
+|+++|+.+.. .+...+..|..+|...+.+.+.++..+ . +.+.||++.+.+..... .
T Consensus 142 iI~~~S~~~~~-----------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~ 210 (264)
T d1spxa_ 142 IVNISSIASGL-----------HATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSK 210 (264)
T ss_dssp EEEECCTTSSS-----------SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC------------
T ss_pred ceeeeeecccc-----------ccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHH
Confidence 77777764321 122234556677777777666554433 2 78889988654422110 0
Q ss_pred --HHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 250 --VGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 250 --~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
..........++ ..-+...+|+|+++++++.++
T Consensus 211 ~~~~~~~~~~~~~P-----l~R~g~pedvA~~v~fL~S~~ 245 (264)
T d1spxa_ 211 KFYSTMATMKECVP-----AGVMGQPQDIAEVIAFLADRK 245 (264)
T ss_dssp --HHHHHHHHHHCT-----TSSCBCHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHhcCC-----CCCCcCHHHHHHHHHHHhCCc
Confidence 001111111111 112567899999999998654
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.71 E-value=3.5e-17 Score=140.67 Aligned_cols=207 Identities=14% Similarity=0.110 Sum_probs=132.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|+++||||+++||+++++.|++.|+. |++.+|+.+. ..+..+++...+ ....++.++.+|++
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~---V~~~~r~~~~--l~~~~~~i~~~~----------~~~~~~~~~~~Dv~ 66 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQ---VTITGRNEDR--LEETKQQILKAG----------VPAEKINAVVADVT 66 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESCHHH--HHHHHHHHHHTT----------CCGGGEEEEECCTT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHHH--HHHHHHHHHHcC----------CCCcceEEEEeeCC
Confidence 57899999999999999999999999997 8889986431 111112222211 01147889999999
Q ss_pred CCCCCCCHHHHHHHhc-------cccEEEEcceeccc---------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceE
Q psy17679 122 LPGLGLSETDRATLVK-------QVNIVFHGAATVRF---------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAF 182 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~---------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~ 182 (303)
+.+ ++.++++ ++|++|||||.... .+.|...+++|+.++..+.+++.+. ++..++
T Consensus 67 ~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~i 140 (274)
T d1xhla_ 67 EAS------GQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIV 140 (274)
T ss_dssp SHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CHH------HHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccc
Confidence 976 4554443 78999999996321 1346788999999998888777543 245677
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH--------HH
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI--------GM 248 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~--------~~ 248 (303)
+++||..+.. +...+..|..+|...+.+.+.++..+ . +.|.||++.+.+... ..
T Consensus 141 i~~ss~~~~~------------~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~ 208 (274)
T d1xhla_ 141 NVSSIVAGPQ------------AHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDK 208 (274)
T ss_dssp EECCGGGSSS------------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHH
T ss_pred cchhhhhccc------------cCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHH
Confidence 7777765432 22234567777777777766554333 3 788899876543111 11
Q ss_pred HHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 249 LVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
...........++ ..-+...+|+|+++++++..
T Consensus 209 ~~~~~~~~~~~iP-----lgR~g~pediA~~v~fL~S~ 241 (274)
T d1xhla_ 209 LYSFIGSRKECIP-----VGHCGKPEEIANIIVFLADR 241 (274)
T ss_dssp HHHHHHHCTTTCT-----TSSCBCHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHcCCC-----CCCCcCHHHHHHHHHHHcCC
Confidence 1111111111111 11256899999999998863
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.70 E-value=1.6e-16 Score=135.13 Aligned_cols=206 Identities=11% Similarity=0.091 Sum_probs=133.3
Q ss_pred ccCCcEEEEeCCcc--hhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGGTG--FMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGatG--~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+++|++|||||+| +||++++++|++.|+. |.+..|++... +..+++... ..+..++.+
T Consensus 5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~---V~i~~~~~~~~---~~~~~~~~~-------------~~~~~~~~~ 65 (256)
T d1ulua_ 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAE---VALSYQAERLR---PEAEKLAEA-------------LGGALLFRA 65 (256)
T ss_dssp CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCE---EEEEESSGGGH---HHHHHHHHH-------------TTCCEEEEC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCE---EEEEeCcHHHH---HHHHHhhhc-------------cCccccccc
Confidence 37899999999997 7999999999999998 87778864322 222222221 146678999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc-CCC
Q psy17679 119 DCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM-KDL 179 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~ 179 (303)
|+++.+ ++..+++ ++|++||||+.... ...+...+++|+.+...+.+.+... .+.
T Consensus 66 D~~~~~------~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~ 139 (256)
T d1ulua_ 66 DVTQDE------ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG 139 (256)
T ss_dssp CTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE
T ss_pred ccCCHH------HHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC
Confidence 999976 4555443 79999999997421 1235568889999999998887654 223
Q ss_pred ceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHH-HHHH
Q psy17679 180 KAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGM-LVGI 252 (303)
Q Consensus 180 ~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~-~~~~ 252 (303)
.++|++||..+.. +...+..|..+|...+.+.+.++..+. +.+.||.+.+....... ....
T Consensus 140 G~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~ 207 (256)
T d1ulua_ 140 GGIVTLTYYASEK------------VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKM 207 (256)
T ss_dssp EEEEEEECGGGTS------------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHH
T ss_pred CEEEEEeehHhcC------------CCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHH
Confidence 6899999997643 233456677777777777776654443 68889977543322110 0111
Q ss_pred HhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 253 ATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.......++ ..-+...+|+|+++++++...+
T Consensus 208 ~~~~~~~~p-----l~R~~~pedvA~~v~fL~S~~s 238 (256)
T d1ulua_ 208 YDRVAQTAP-----LRRNITQEEVGNLGLFLLSPLA 238 (256)
T ss_dssp HHHHHHHST-----TSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHhcCC-----CCCCcCHHHHHHHHHHHhCchh
Confidence 111111111 1125678999999999987544
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.70 E-value=7.4e-17 Score=138.48 Aligned_cols=207 Identities=12% Similarity=0.140 Sum_probs=132.0
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHH-HHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
+++|++|||||+++||+++++.|.+.|+. |++.+|++.. .+.+ +++.+.+ ....++.++.+|+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~---V~l~~r~~~~---l~~~~~~l~~~~----------~~~~~~~~~~~Dv 66 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEGAN---VTITGRSSER---LEETRQIILKSG----------VSEKQVNSVVADV 66 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHHTTT----------CCGGGEEEEECCT
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHHhcC----------CCCCceEEEEccC
Confidence 57899999999999999999999999997 9899997431 1222 1121110 0124788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc--------c---ccHHHHHhhhHHHHHHHHHHHHhc--CCCc
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF--------D---EHIKMAVKINVCGVQAMLQLAREM--KDLK 180 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~--------~---~~~~~~~~~N~~~~~~ll~~a~~~--~~~~ 180 (303)
++.+ ++..+++ ++|++|||||.... + ..|...+++|+.++..+.+++.+. .+..
T Consensus 67 s~~~------~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g 140 (272)
T d1xkqa_ 67 TTED------GQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKG 140 (272)
T ss_dssp TSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCHH------HHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCC
Confidence 9976 4544443 78999999997531 1 136778899999998888877653 1234
Q ss_pred eEEEEeCC-cccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccCh-----HHH
Q psy17679 181 AFVHVSTA-FTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGP-----IGM 248 (303)
Q Consensus 181 r~i~iSS~-~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~-----~~~ 248 (303)
++|+++|+ .+.. +...+..|..+|...+.+.+.++..+ . +.|.||++.+.+.. ...
T Consensus 141 ~iI~~~Ss~a~~~------------~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~ 208 (272)
T d1xkqa_ 141 EIVNVSSIVAGPQ------------AQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQA 208 (272)
T ss_dssp EEEEECCGGGSSS------------CCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHH
T ss_pred ccccccchhcccc------------CCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHH
Confidence 66666665 3332 22234567777777777776555433 2 78889987544311 111
Q ss_pred HH---HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 249 LV---GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 249 ~~---~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
.. .........++ ..-+...+|+|+++++++...
T Consensus 209 ~~~~~~~~~~~~~~~P-----lgR~g~pediA~~v~fL~S~~ 245 (272)
T d1xkqa_ 209 SQKFYNFMASHKECIP-----IGAAGKPEHIANIILFLADRN 245 (272)
T ss_dssp HHHHHHHHHHCTTTCT-----TSSCBCHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHhcCCC-----CCCCcCHHHHHHHHHHHhCcc
Confidence 11 11111111111 123678899999999998643
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.69 E-value=2.4e-16 Score=135.44 Aligned_cols=206 Identities=17% Similarity=0.207 Sum_probs=130.3
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+++|++|||||+++||+++++.|+++|+. |++++|+. ++++++... ...++.++.+|++
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~---V~i~~r~~------~~l~~~~~~------------~~~~~~~~~~Dv~ 61 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAEGAK---VAVLDKSA------ERLAELETD------------HGDNVLGIVGDVR 61 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHHHHHHH------------HGGGEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCH------HHHHHHHHH------------cCCCeeEEecccc
Confidence 57899999999999999999999999998 88899863 333333221 1257889999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceecccc------------ccHHHHHhhhHHHHHHHHHHHHhc--CCCc
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRFD------------EHIKMAVKINVCGVQAMLQLAREM--KDLK 180 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~~------------~~~~~~~~~N~~~~~~ll~~a~~~--~~~~ 180 (303)
+.+ ++.+++ ..+|++|||||..... ..|...+++|+.++..+.+++.+. .+..
T Consensus 62 ~~~------~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g 135 (276)
T d1bdba_ 62 SLE------DQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRG 135 (276)
T ss_dssp CHH------HHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred cHH------HHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 976 444443 3789999999974321 136788999999988887777543 1236
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC---c--EEeecceecCcc-ChHH--HHHHH
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR---V--HISGTGWIDNVY-GPIG--MLVGI 252 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~---~--~ii~pg~~~~~~-g~~~--~~~~~ 252 (303)
++|++||..+... ...+..|..+|...+.+.+.++..+ . +.|.||++.+.. ++.. .....
T Consensus 136 ~iI~i~S~~~~~~------------~~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~ 203 (276)
T d1bdba_ 136 NVIFTISNAGFYP------------NGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKA 203 (276)
T ss_dssp EEEEECCGGGTST------------TSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC-----
T ss_pred CceeeeechhccC------------CCCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhc
Confidence 8999999865432 2234456666666666665443332 3 788899875432 2211 10100
Q ss_pred Hh-hhhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 253 AT-GVLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 253 ~~-~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
.. ......+.......-+...+|+|+++++++..
T Consensus 204 ~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~ 238 (276)
T d1bdba_ 204 ISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATR 238 (276)
T ss_dssp ----CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCH
T ss_pred cCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCC
Confidence 00 00000010111112256789999999988753
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.69 E-value=3.1e-16 Score=133.66 Aligned_cols=211 Identities=12% Similarity=0.114 Sum_probs=135.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+++||+++++.|++.|+. |++++|+.... .+..+++... ...++.++.+|+
T Consensus 6 ~l~gK~alITGas~GIG~aia~~la~~Ga~---V~i~~r~~~~~--~~~~~~~~~~------------~g~~~~~~~~Dv 68 (260)
T d1h5qa_ 6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGAN---VAVIYRSAADA--VEVTEKVGKE------------FGVKTKAYQCDV 68 (260)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEE---EEEEESSCTTH--HHHHHHHHHH------------HTCCEEEEECCT
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHHH--HHHHHHHHHH------------hCCceEEEEccC
Confidence 467899999999999999999999999997 99999986532 2222222221 125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHh----cCCCceE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLARE----MKDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~----~~~~~r~ 182 (303)
++++ ++.++++ ++|++|||||.... ...|...+++|+.++..+.+.+.+ .+...++
T Consensus 69 ~~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i 142 (260)
T d1h5qa_ 69 SNTD------IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSI 142 (260)
T ss_dssp TCHH------HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEE
Confidence 9977 4555543 79999999997532 235678899999998887766543 2244566
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChH---HHHHHHH
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPI---GMLVGIA 253 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~---~~~~~~~ 253 (303)
+.+||......... ...+......|..+|...+.+.+.++..+ . +.+.||++.+..... .......
T Consensus 143 ~~~~s~~~~~~~~~-----~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~ 217 (260)
T d1h5qa_ 143 VVTSSMSSQIINQS-----SLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQA 217 (260)
T ss_dssp EEECCGGGTSCCEE-----ETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHH
T ss_pred EEeecccccccccc-----ccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHH
Confidence 66666644322110 00111233457777777777766554333 2 788899876544221 1212111
Q ss_pred hhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 254 TGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
. .++ ..-+...+|+|+++++++.+.+
T Consensus 218 ~----~~p-----l~R~g~pedvA~~v~fL~S~~s 243 (260)
T d1h5qa_ 218 S----NIP-----LNRFAQPEEMTGQAILLLSDHA 243 (260)
T ss_dssp H----TCT-----TSSCBCGGGGHHHHHHHHSGGG
T ss_pred h----cCC-----CCCCcCHHHHHHHHHHHhcchh
Confidence 1 111 1125778999999999886543
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.69 E-value=7.6e-17 Score=137.44 Aligned_cols=205 Identities=12% Similarity=0.064 Sum_probs=135.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
++++|+||||||+++||.++++.|++.|++ |++..|.... ..+.+.+.+.. ...++.++.+|+
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~~---Vvi~~~~~~~--~~~~~~~~~~~------------~g~~~~~~~~D~ 65 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGAS---VVVNYGSSSK--AAEEVVAELKK------------LGAQGVAIQADI 65 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHHHH------------TTCCEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEcCCChH--HHHHHHHHHHH------------cCCCceEecCCC
Confidence 578999999999999999999999999998 7776664321 12222222221 125788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHV 185 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~i 185 (303)
++.+ ++..+++ .+|++|||||.... ...+...+++|+.+...+++.+.+. ....+++.+
T Consensus 66 ~~~~------~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii 139 (259)
T d1ja9a_ 66 SKPS------EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILT 139 (259)
T ss_dssp TSHH------HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHH------HHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccc
Confidence 9876 4544443 78999999998532 2345688899999999998888765 233567778
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccCh--------------
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGP-------------- 245 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~-------------- 245 (303)
+|.++... +...+..|..+|...+.+.+.++..+. +.|.||++.+..-.
T Consensus 140 ~s~~~~~~-----------~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~ 208 (259)
T d1ja9a_ 140 SSIAAVMT-----------GIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGM 208 (259)
T ss_dssp CCGGGTCC-----------SCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTC
T ss_pred cccccccc-----------CCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccC
Confidence 77754321 223445677777777777766554433 78889977532200
Q ss_pred --HHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 246 --IGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 246 --~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+...+... .....+...+|+|+++++++.+.+
T Consensus 209 ~~~~~~~~~~~~---------~pl~R~g~p~eVa~~v~fL~S~~a 244 (259)
T d1ja9a_ 209 PQEKIDEGLANM---------NPLKRIGYPADIGRAVSALCQEES 244 (259)
T ss_dssp CHHHHHHHHHHT---------STTSSCBCHHHHHHHHHHHHSGGG
T ss_pred CHHHHHHHHHhC---------CCCCCCcCHHHHHHHHHHHhCchh
Confidence 0011111111 111236789999999999998654
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=2.7e-16 Score=133.58 Aligned_cols=211 Identities=12% Similarity=0.082 Sum_probs=133.1
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+|++|||||+++||+++++.|+++|+. |.+++|+.. ++++.... +.+. ....++.++.+|+++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~---V~i~~r~~~------~~~~~~~~-----l~~~--~~~~~~~~~~~Dv~~ 65 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAK---VALVDWNLE------AGVQCKAA-----LHEQ--FEPQKTLFIQCDVAD 65 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH-----HTTT--SCGGGEEEEECCTTS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHH-----HHHh--cCCCcEEEEEeecCC
Confidence 5799999999999999999999999997 989999743 22221111 0100 012578899999999
Q ss_pred CCCCCCHHHHHHHhc-------cccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhc------CCCceEEEEeCCc
Q psy17679 123 PGLGLSETDRATLVK-------QVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREM------KDLKAFVHVSTAF 189 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~------~~~~r~i~iSS~~ 189 (303)
.+ ++..+++ ++|++|||||... ..+++..+++|+.++..+.+++.+. +...+||++||..
T Consensus 66 ~~------~v~~~~~~~~~~~G~iDilVnnAg~~~-~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~ 138 (254)
T d2gdza1 66 QQ------QLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA 138 (254)
T ss_dssp HH------HHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred HH------HHHHHHHHHHHHcCCcCeecccccccc-cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHh
Confidence 76 4554443 7899999999854 4567889999999887777666543 1135799999997
Q ss_pred ccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHh------hCcCCc--EEeecceecCccChHHHHHHHHhhh--hhh
Q psy17679 190 THCPRERIDEEFYPVPLKYENLIQLISETGDEELSE------MTPNRV--HISGTGWIDNVYGPIGMLVGIATGV--LHT 259 (303)
Q Consensus 190 ~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~------~~~~~~--~ii~pg~~~~~~g~~~~~~~~~~~~--~~~ 259 (303)
+.. |...+..|..+|...+.+.+. +.+... +.+.||.+.+.+.....-....... ...
T Consensus 139 ~~~------------~~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~ 206 (254)
T d2gdza1 139 GLM------------PVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKD 206 (254)
T ss_dssp GTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHH
T ss_pred hcc------------CCCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHH
Confidence 653 233455677777777766553 233333 7888997754321110000000000 000
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.+...-....+...+|+|+++++++.++.
T Consensus 207 ~~~~~~p~~r~~~pedvA~~v~fL~s~~~ 235 (254)
T d2gdza1 207 HIKDMIKYYGILDPPLIANGLITLIEDDA 235 (254)
T ss_dssp HHHHHHHHHCCBCHHHHHHHHHHHHHCTT
T ss_pred HHHhcCCCCCCcCHHHHHHHHHHHHcCCC
Confidence 00000001124678999999999998654
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=3.7e-16 Score=135.59 Aligned_cols=211 Identities=12% Similarity=0.107 Sum_probs=135.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+++||+++++.|++.|+. |++.+|+.... .+..+++... + ......++.++.+|+
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~---Vvi~~r~~~~l--~~~~~el~~~-----~---~~~~~~~~~~~~~Dv 75 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGSN---VVIASRKLERL--KSAADELQAN-----L---PPTKQARVIPIQCNI 75 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH--HHHHHHHHHT-----S---CTTCCCCEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHHH--HHHHHHHHhh-----h---ccccCceEEEEeccC
Confidence 488999999999999999999999999998 88999974321 1111222110 0 111235788999999
Q ss_pred CCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEE
Q psy17679 121 SLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFV 183 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i 183 (303)
++.+ ++..+++ ++|++|||||.... ...|...+++|+.++..+.+++.+. ++..++|
T Consensus 76 s~~~------~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii 149 (297)
T d1yxma1 76 RNEE------EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIV 149 (297)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEE
T ss_pred CCHH------HHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccc
Confidence 9977 4554443 78999999997432 3456789999999999888877643 2445788
Q ss_pred EEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHH---HHHHHHh
Q psy17679 184 HVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIG---MLVGIAT 254 (303)
Q Consensus 184 ~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~---~~~~~~~ 254 (303)
++||..... ......|..+|...+.+.+.++..+. +.|.||++.+...... .......
T Consensus 150 ~~ss~~~~~-------------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~ 216 (297)
T d1yxma1 150 NIIVPTKAG-------------FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFE 216 (297)
T ss_dssp EECCCCTTC-------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGT
T ss_pred ccccccccc-------------ccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHH
Confidence 887653221 11334566677777777776654443 7888997754432110 0001111
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....++ ..-+...+|+|.++++++...+
T Consensus 217 ~~~~~~p-----lgR~g~pedvA~~v~fL~Sd~s 245 (297)
T d1yxma1 217 GSFQKIP-----AKRIGVPEEVSSVVCFLLSPAA 245 (297)
T ss_dssp TGGGGST-----TSSCBCTHHHHHHHHHHHSGGG
T ss_pred HHHhcCC-----CCCCcCHHHHHHHHHHHhCchh
Confidence 1111111 1225678999999999997543
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.67 E-value=4.6e-16 Score=133.44 Aligned_cols=210 Identities=12% Similarity=0.089 Sum_probs=136.6
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
..+++|++|||||++.||+++++.|+++|++ |++++|+.... ..+..+++.. ...++.++.+|
T Consensus 14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~---Vvi~~~~~~~~-~~~~~~~~~~-------------~g~~~~~~~~D 76 (272)
T d1g0oa_ 14 ASLEGKVALVTGAGRGIGREMAMELGRRGCK---VIVNYANSTES-AEEVVAAIKK-------------NGSDAACVKAN 76 (272)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHHH-HHHHHHHHHH-------------TTCCEEEEECC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEeCCchHH-HHHHHHHHHh-------------hCCceeeEeCC
Confidence 3588999999999999999999999999998 88887764321 1111122211 12578899999
Q ss_pred CCCCCCCCCHHHHHHHhc-------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEE
Q psy17679 120 CSLPGLGLSETDRATLVK-------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVH 184 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~ 184 (303)
+++.+ ++..+++ ++|++||+++.... ...+...+++|+.++..+.+++.+. ....++++
T Consensus 77 ~~~~~------~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~ 150 (272)
T d1g0oa_ 77 VGVVE------DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLIL 150 (272)
T ss_dssp TTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCHH------HHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccc
Confidence 99976 4444433 78999999998542 2345678899999999999888765 23467888
Q ss_pred EeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC----c--EEeecceecCccChHHHHHHHHhhhhh
Q psy17679 185 VSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR----V--HISGTGWIDNVYGPIGMLVGIATGVLH 258 (303)
Q Consensus 185 iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~----~--~ii~pg~~~~~~g~~~~~~~~~~~~~~ 258 (303)
++|+++... +...+..|..+|...+.+.+.++..+ . +.|.||++.+... .........
T Consensus 151 i~s~~~~~~-----------~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~-----~~~~~~~~~ 214 (272)
T d1g0oa_ 151 MGSITGQAK-----------AVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMY-----HAVCREYIP 214 (272)
T ss_dssp ECCGGGTCS-----------SCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHH-----HHHGGGGST
T ss_pred ccccccccc-----------cccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHH-----HHHHHhhhh
Confidence 888865421 22344556667776777776554433 2 7888997754321 111110000
Q ss_pred ------------hccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 259 ------------THLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 259 ------------~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..........-+...+|+|.++++++...+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~s~~s 256 (272)
T d1g0oa_ 215 NGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDG 256 (272)
T ss_dssp TCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred cccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCchh
Confidence 000000001236789999999999987544
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.67 E-value=1.1e-16 Score=141.99 Aligned_cols=198 Identities=14% Similarity=0.041 Sum_probs=129.2
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|+|+|||||||+|++|+++|+++|++ |++++|++++..... +. ...+++++++|+.|
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~---V~~l~R~~~~~~~~~----~~--------------~~~~v~~~~gD~~d 60 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHH---VRAQVHSLKGLIAEE----LQ--------------AIPNVTLFQGPLLN 60 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCC---EEEEESCSCSHHHHH----HH--------------TSTTEEEEESCCTT
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCe---EEEEECCcchhhhhh----hc--------------ccCCCEEEEeeCCC
Confidence 4689999999999999999999999998 999999876433211 11 12689999999998
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcccCCCCccccCCC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFTHCPRERIDEEFY 202 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~~~~~~~~~E~~~ 202 (303)
.. +.+..++..+|+++++.... ...++....++++++.+. +++++++.||.........
T Consensus 61 ~~-----~~~~~a~~~~~~~~~~~~~~---------~~~~~~~~~~~~~aa~~a-gv~~~v~~Ss~~~~~~~~~------ 119 (350)
T d1xgka_ 61 NV-----PLMDTLFEGAHLAFINTTSQ---------AGDEIAIGKDLADAAKRA-GTIQHYIYSSMPDHSLYGP------ 119 (350)
T ss_dssp CH-----HHHHHHHTTCSEEEECCCST---------TSCHHHHHHHHHHHHHHH-SCCSEEEEEECCCGGGTSS------
T ss_pred cH-----HHHHHHhcCCceEEeecccc---------cchhhhhhhHHHHHHHHh-CCCceEEEeeccccccCCc------
Confidence 64 14667888999888775531 123556678899999998 8888888888743321110
Q ss_pred CCCCChhhHHHHHHHHHHHHHHhhCcCCcEEeecceecCcc-ChHHHH---HHHHhhh-hhhccCCCCccccceeh-hHH
Q psy17679 203 PVPLKYENLIQLISETGDEELSEMTPNRVHISGTGWIDNVY-GPIGML---VGIATGV-LHTHLINLNTVTDMVPV-DLV 276 (303)
Q Consensus 203 ~~~~~~~~~~~~~k~~~E~~~~~~~~~~~~ii~pg~~~~~~-g~~~~~---~~~~~~~-~~~~~~~~~~~~~~i~v-~D~ 276 (303)
.+..++ ..+|...+.+.......+ ++++|+++++.+ ++.... .....+. ....+..++..+.|+++ +|+
T Consensus 120 -~~~~~~---~~~k~~~~~~~~~~~~~~-~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dv 194 (350)
T d1xgka_ 120 -WPAVPM---WAPKFTVENYVRQLGLPS-TFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDV 194 (350)
T ss_dssp -CCCCTT---THHHHHHHHHHHTSSSCE-EEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHH
T ss_pred -ccchhh---hhhHHHHHHHHHhhccCc-eeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHH
Confidence 111222 234555677776654433 688888765332 111000 0011111 11234456777888876 799
Q ss_pred HHHHHHHHhhc
Q psy17679 277 VNSMISIAWSI 287 (303)
Q Consensus 277 a~ai~~~~~~~ 287 (303)
++++..++.++
T Consensus 195 a~~v~~~l~~~ 205 (350)
T d1xgka_ 195 GPALLQIFKDG 205 (350)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhCC
Confidence 99999998754
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.66 E-value=2.2e-15 Score=127.41 Aligned_cols=166 Identities=14% Similarity=0.205 Sum_probs=113.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHh---cCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLR---SCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~---~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
||+||||||+++||++++++|++ .|+. |++.+|+.+... .++++... ..++.++.+|+
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~---V~~~~r~~~~~~---~~~~~~~~-------------~~~~~~~~~Dv 62 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQH---LFTTCRNREQAK---ELEDLAKN-------------HSNIHILEIDL 62 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSE---EEEEESCTTSCH---HHHHHHHH-------------CTTEEEEECCT
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCE---EEEEECCHHHHH---HHHHHHhc-------------CCcEEEEEEEe
Confidence 68899999999999999999985 4555 999999876543 23333222 26899999999
Q ss_pred CCCCCCCCHHHHHHHh---------ccccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc-------
Q psy17679 121 SLPGLGLSETDRATLV---------KQVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM------- 176 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~---------~~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~------- 176 (303)
+|.+ ++..++ .++|++|||||.... ...+...+++|+.++..+.+.+...
T Consensus 63 s~~~------~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~ 136 (248)
T d1snya_ 63 RNFD------AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKA 136 (248)
T ss_dssp TCGG------GHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHH------HHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhc
Confidence 9987 233222 268999999997432 1225678899999988887766432
Q ss_pred -------CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhC----cCCc--EEeecceecCcc
Q psy17679 177 -------KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMT----PNRV--HISGTGWIDNVY 243 (303)
Q Consensus 177 -------~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~----~~~~--~ii~pg~~~~~~ 243 (303)
.+..++|++||..+.... .+......|..+|.....+.+.++ +... +.+.||++.+.+
T Consensus 137 ~~~~~~~~~~g~ii~i~S~~g~~~~---------~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m 207 (248)
T d1snya_ 137 NESQPMGVGRAAIINMSSILGSIQG---------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM 207 (248)
T ss_dssp TTTSCSSTTTCEEEEECCGGGCSTT---------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred cccccccccccccccccccccccCC---------CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence 134689999998664322 123334467777766666665543 3333 677799886554
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.64 E-value=8.7e-16 Score=133.47 Aligned_cols=200 Identities=10% Similarity=0.071 Sum_probs=128.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc---cHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK---DIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~---~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
+++|++|||||+++||+++++.|+++|+. |++.+|+.+.. ...+.++++.... ........+
T Consensus 5 l~gKvalITGas~GIG~aiA~~la~~Ga~---Vvi~d~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 69 (302)
T d1gz6a_ 5 FDGRVVLVTGAGGGLGRAYALAFAERGAL---VVVNDLGGDFKGVGKGSSAADKVVEEI------------RRRGGKAVA 69 (302)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECCCBCTTSCBCCSHHHHHHHHHH------------HHTTCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEeCCchhhhhhhhHHHHHHHHHHH------------hhccccccc
Confidence 56899999999999999999999999997 88887764321 1112222221110 023345677
Q ss_pred cCCCCCCCCCHHHHHHH---hccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEE
Q psy17679 119 DCSLPGLGLSETDRATL---VKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHV 185 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~---~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~i 185 (303)
|+++.+. ....+..+ +.++|++|||||.... ...|...+++|+.++..+.+.+.+. ++..+||++
T Consensus 70 d~~~~~~--~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~i 147 (302)
T d1gz6a_ 70 NYDSVEA--GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMT 147 (302)
T ss_dssp ECCCGGG--HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred ccchHHH--HHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEe
Confidence 8877651 01112222 2379999999998542 2356789999999998888777543 255799999
Q ss_pred eCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHhhhhhh
Q psy17679 186 STAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIATGVLHT 259 (303)
Q Consensus 186 SS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~~~~~~ 259 (303)
||..+.. +......|..+|.....+.+.++..+. +.+.||.+.......
T Consensus 148 sS~~~~~------------~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~------------- 202 (302)
T d1gz6a_ 148 ASASGIY------------GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETV------------- 202 (302)
T ss_dssp CCHHHHH------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGG-------------
T ss_pred CChhhcC------------CCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhc-------------
Confidence 9996542 122345677777777777766654433 678898664332110
Q ss_pred ccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 260 HLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 260 ~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
. +.....++..+|+|.++++++..
T Consensus 203 -~--~~~~~~~~~PedvA~~v~fL~S~ 226 (302)
T d1gz6a_ 203 -M--PEDLVEALKPEYVAPLVLWLCHE 226 (302)
T ss_dssp -S--CHHHHHHSCGGGTHHHHHHHTST
T ss_pred -C--cHhhHhcCCHHHHHHHHHHHcCC
Confidence 0 11122345678999999998753
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.64 E-value=5.3e-15 Score=125.12 Aligned_cols=196 Identities=13% Similarity=0.099 Sum_probs=121.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|++|+||||||+++||++++++|+++|+.+ .|++.+|+.+... ++.+ ....++.++.+|++
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~-~Vi~~~R~~~~~~------~l~~------------~~~~~~~~~~~Dvs 61 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKAT------ELKS------------IKDSRVHVLPLTVT 61 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCH------HHHT------------CCCTTEEEEECCTT
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCC-EEEEEeCCHHHHH------HHHH------------hhCCceEEEEEecC
Confidence 567999999999999999999999998752 3778888754322 1111 12358999999999
Q ss_pred CCCCCCCHHHHHHHhc---------cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc--------
Q psy17679 122 LPGLGLSETDRATLVK---------QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM-------- 176 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~---------~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~-------- 176 (303)
+.+ ++..+.+ .+|++|||||.... ...+...+++|+.++..+.+.+.+.
T Consensus 62 ~~~------~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~ 135 (250)
T d1yo6a1 62 CDK------SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKE 135 (250)
T ss_dssp CHH------HHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSS
T ss_pred CHH------HHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCC
Confidence 976 3433322 38999999997432 1235678999999998887776432
Q ss_pred ------CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccC
Q psy17679 177 ------KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYG 244 (303)
Q Consensus 177 ------~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g 244 (303)
....+++.+|+........ ....+..+...|..+|.....+.+.++..+. ..+.||++.+.++
T Consensus 136 ~~~~~~~~~~~~i~~s~~~~~~~~~-----~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~ 210 (250)
T d1yo6a1 136 SGDQLSVSRAAVITISSGLGSITDN-----TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG 210 (250)
T ss_dssp CSSCCCTTTCEEEEECCGGGCSTTC-----CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----
T ss_pred CCccccceeccccccccccccccCC-----cccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCC
Confidence 0124677777764332110 1112223344577777777777665544332 6777998755432
Q ss_pred hHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 245 PIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.. ...+..++.++.++..+..+.
T Consensus 211 ~~---------------------~~~~~~e~~a~~~~~~~~~~~ 233 (250)
T d1yo6a1 211 GK---------------------NAALTVEQSTAELISSFNKLD 233 (250)
T ss_dssp -----------------------------HHHHHHHHHHHTTCC
T ss_pred CC---------------------CCCCCHHHHHHHHHHHHhcCC
Confidence 10 012456778888888776543
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.63 E-value=3.8e-15 Score=125.00 Aligned_cols=192 Identities=9% Similarity=0.011 Sum_probs=126.9
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
++|+||||||+|+||+++++.|+++|+. |.+++|.+.... ........|..+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~---V~~~~~~~~~~~-------------------------~~~~~~~~~~~~ 52 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWW---VASIDVVENEEA-------------------------SASVIVKMTDSF 52 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCE---EEEEESSCCTTS-------------------------SEEEECCCCSCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCccccc-------------------------cccceeecccCc
Confidence 4799999999999999999999999997 888888654211 222333444333
Q ss_pred CCC-CCCHHHHHHHhc--cccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeCCcc
Q psy17679 123 PGL-GLSETDRATLVK--QVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVSTAFT 190 (303)
Q Consensus 123 ~~~-~~~~~~~~~~~~--~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS~~~ 190 (303)
.+. ..-...+...+. ++|++|||||.... ...+...+++|+.+...+.+++.+. ++..+||++||..+
T Consensus 53 ~~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~ 132 (236)
T d1dhra_ 53 TEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA 132 (236)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH
Confidence 220 000011112222 58999999995321 2335678899999998888887764 23468999999976
Q ss_pred cCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC------c--EEeecceecCccChHHHHHHHHhhhhhhccC
Q psy17679 191 HCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR------V--HISGTGWIDNVYGPIGMLVGIATGVLHTHLI 262 (303)
Q Consensus 191 ~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~------~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~ 262 (303)
.. +...+..|..+|...+.+.+.++..+ . +.+.||++.+.+.. .. .
T Consensus 133 ~~------------~~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~-----~~--------~- 186 (236)
T d1dhra_ 133 LD------------GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR-----KS--------M- 186 (236)
T ss_dssp GS------------CCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH-----HH--------S-
T ss_pred cC------------CccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcch-----hh--------C-
Confidence 53 33356778899999999999886543 2 67779877553311 00 0
Q ss_pred CCCccccceehhHHHHHHHHHHhhcc
Q psy17679 263 NLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 263 ~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....-.|+..+++|+.+..++....
T Consensus 187 ~~~~~~~~~~pe~va~~~~~l~s~~~ 212 (236)
T d1dhra_ 187 PEADFSSWTPLEFLVETFHDWITGNK 212 (236)
T ss_dssp TTSCGGGSEEHHHHHHHHHHHHTTTT
T ss_pred ccchhhcCCCHHHHHHHHHHHhCCCc
Confidence 11122357889999999999887543
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.63 E-value=8.5e-15 Score=124.44 Aligned_cols=206 Identities=20% Similarity=0.186 Sum_probs=137.4
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc-cHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK-DIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~-~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
+-.+.+||||||+|+||.++++.|++.|+. +|+++.|+.... ...+.++++... ..++.++.+|
T Consensus 6 ~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~--~vvl~~R~~~~~~~~~~~~~~l~~~-------------g~~v~~~~~D 70 (259)
T d2fr1a1 6 WKPTGTVLVTGGTGGVGGQIARWLARRGAP--HLLLVSRSGPDADGAGELVAELEAL-------------GARTTVAACD 70 (259)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCS--EEEEEESSGGGSTTHHHHHHHHHHT-------------TCEEEEEECC
T ss_pred cCCcCEEEEECCCcHHHHHHHHHHHHCCCC--EEEEEeCCccCHHHHHHHHHHHHhc-------------cccccccccc
Confidence 445679999999999999999999999875 377788864332 233333333221 2678999999
Q ss_pred CCCCCCCCCHHHHHHHhc------cccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy17679 120 CSLPGLGLSETDRATLVK------QVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVS 186 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~------~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iS 186 (303)
++|.+ ++..+++ .+|.|+|++|.... ...+...+++|+.+..++.++.... +..+||++|
T Consensus 71 v~d~~------~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-~~~~iv~~S 143 (259)
T d2fr1a1 71 VTDRE------SVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFS 143 (259)
T ss_dssp TTCHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEE
T ss_pred cchHH------HHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-CCceEeeec
Confidence 99976 5666654 48999999998643 2234667889999999998888776 778999999
Q ss_pred CCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc--EEeecceecCccChHHHHHHHHhhhhhhccCCC
Q psy17679 187 TAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV--HISGTGWIDNVYGPIGMLVGIATGVLHTHLINL 264 (303)
Q Consensus 187 S~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~ 264 (303)
|..+.... .....|..+|...+.+.+.+..... +.|.||.+. ++. +........ + .
T Consensus 144 S~a~~~g~------------~~~~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~---~~g-~~~~~~~~~----~--~ 201 (259)
T d2fr1a1 144 SFASAFGA------------PGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWA---GSG-MAEGPVADR----F--R 201 (259)
T ss_dssp EHHHHTCC------------TTCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC--------------------C--T
T ss_pred chhhccCC------------cccHHHHHHHHhHHHHHHHHHhCCCCEEECCCCccc---CCc-cccchHHHH----H--H
Confidence 99654321 1233466777778888877765544 677787432 111 111111111 1 1
Q ss_pred CccccceehhHHHHHHHHHHhhcccC
Q psy17679 265 NTVTDMVPVDLVVNSMISIAWSIGES 290 (303)
Q Consensus 265 ~~~~~~i~v~D~a~ai~~~~~~~~~~ 290 (303)
......+..+++++++..++..+...
T Consensus 202 ~~G~~~~~~~~~~~~l~~~l~~~~~~ 227 (259)
T d2fr1a1 202 RHGVIEMPPETACRALQNALDRAEVC 227 (259)
T ss_dssp TTTEECBCHHHHHHHHHHHHHTTCSS
T ss_pred hcCCCCCCHHHHHHHHHHHHhCCCce
Confidence 12234578999999999988866543
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.63 E-value=2e-15 Score=128.54 Aligned_cols=207 Identities=14% Similarity=0.084 Sum_probs=134.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHh---cCCCccEEEEEeCCCCcccHHHHH-HHHHHhHHHhhhhccCcCcCCceEEE
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLR---SCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRLFWRLRAEVPDFRSKVSAV 116 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~---~g~~v~~V~~~~R~~~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~v~~~ 116 (303)
.+++|.++||||+++||+++++.|.+ +|+. |++++|+... .+.+ +++... ....++.++
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~---Vv~~~r~~~~---l~~~~~~l~~~-----------~~~~~~~~~ 65 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSV---MLVSARSESM---LRQLKEELGAQ-----------QPDLKVVLA 65 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCE---EEEEESCHHH---HHHHHHHHHHH-----------CTTSEEEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCE---EEEEECCHHH---HHHHHHHHHhh-----------cCCceEEEE
Confidence 47889999999999999999999976 5776 8899996432 2222 112111 012478899
Q ss_pred EecCCCCCCCCCHHHHHHHhc-----------cccEEEEcceeccc----------cccHHHHHhhhHHHHHHHHHHHHh
Q psy17679 117 AGDCSLPGLGLSETDRATLVK-----------QVNIVFHGAATVRF----------DEHIKMAVKINVCGVQAMLQLARE 175 (303)
Q Consensus 117 ~~Dl~d~~~~~~~~~~~~~~~-----------~~dvVi~~a~~~~~----------~~~~~~~~~~N~~~~~~ll~~a~~ 175 (303)
.+|+++.+ ++.++++ .+|++|||||.... ...|...+++|+.++..+.+.+.+
T Consensus 66 ~~Dvs~~~------~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 139 (259)
T d1oaaa_ 66 AADLGTEA------GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLN 139 (259)
T ss_dssp ECCTTSHH------HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EccCCCHH------HHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 99999976 4554432 46899999996421 134677899999999999998876
Q ss_pred c-C--C--CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC-c---EEeecceecCccChH
Q psy17679 176 M-K--D--LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR-V---HISGTGWIDNVYGPI 246 (303)
Q Consensus 176 ~-~--~--~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~-~---~ii~pg~~~~~~g~~ 246 (303)
. . + ..++|++||..+.. |...+..|..+|...+.+.+.++... + +.+.||++.+.+...
T Consensus 140 ~m~~~~~~~g~Iv~isS~~~~~------------~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~ 207 (259)
T d1oaaa_ 140 AFQDSPGLSKTVVNISSLCALQ------------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQL 207 (259)
T ss_dssp TSCCCTTCEEEEEEECCGGGTS------------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHH
T ss_pred HHHhcCCCcccccccccccccC------------CCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHH
Confidence 5 1 1 35899999997653 33345667777877777777664322 2 778899775543211
Q ss_pred HHH----HHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhc
Q psy17679 247 GML----VGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSI 287 (303)
Q Consensus 247 ~~~----~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 287 (303)
..- ....... ..... ...+...+|+|++++.++...
T Consensus 208 ~~~~~~~~~~~~~~-~~~~~----~~r~~~p~evA~~i~~ll~~~ 247 (259)
T d1oaaa_ 208 ARETSKDPELRSKL-QKLKS----DGALVDCGTSAQKLLGLLQKD 247 (259)
T ss_dssp HHHHCSCHHHHHHH-HHHHH----TTCSBCHHHHHHHHHHHHHHC
T ss_pred hhhcCCCHHHHHHH-HhcCC----CCCCCCHHHHHHHHHHHhhhc
Confidence 100 0000000 00000 012467899999999988754
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.62 E-value=9.3e-16 Score=130.02 Aligned_cols=199 Identities=12% Similarity=0.001 Sum_probs=125.4
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGL 125 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~ 125 (303)
++|||||+++||+.+++.|.++|+. |.+.+|+.... +.++.... .+..+|+++.+.
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~---V~i~~r~~~~~---~~~~~~~~------------------~~~~~dv~~~~~ 57 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHT---VACHDESFKQK---DELEAFAE------------------TYPQLKPMSEQE 57 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCE---EEECCGGGGSH---HHHHHHHH------------------HCTTSEECCCCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCHHHH---HHHHhhhC------------------cEEEeccCCHHH
Confidence 6899999999999999999999997 88888865432 22322211 123577777651
Q ss_pred CCCHHH-H---HHHhccccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCCcc
Q psy17679 126 GLSETD-R---ATLVKQVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTAFT 190 (303)
Q Consensus 126 ~~~~~~-~---~~~~~~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~~~ 190 (303)
..+ + .+.+.++|++|||||.... ..+|...+++|+.++..+.+++.+. ++..+||++||..+
T Consensus 58 ---~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~ 134 (252)
T d1zmta1 58 ---PAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP 134 (252)
T ss_dssp ---HHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT
T ss_pred ---HHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccc
Confidence 111 1 1222379999999986421 2346778899999988887766432 25579999999966
Q ss_pred cCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHH----H---HHHHHhhhh
Q psy17679 191 HCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIG----M---LVGIATGVL 257 (303)
Q Consensus 191 ~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~----~---~~~~~~~~~ 257 (303)
.. +......|..+|...+.+.+.++..+. +.+.||++.+...+.. . .........
T Consensus 135 ~~------------~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~ 202 (252)
T d1zmta1 135 FG------------PWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVK 202 (252)
T ss_dssp TS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHH
T ss_pred cc------------ccccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHH
Confidence 53 222345577777777777665544432 7888998765432211 0 000011111
Q ss_pred hhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 258 HTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 258 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..++ ..-+...+|+|+++++++.+.+
T Consensus 203 ~~~p-----l~R~g~pedvA~~v~fL~S~~s 228 (252)
T d1zmta1 203 KVTA-----LQRLGTQKELGELVAFLASGSC 228 (252)
T ss_dssp HHSS-----SSSCBCHHHHHHHHHHHHTTSC
T ss_pred hcCC-----CCCCcCHHHHHHHHHHHhCchh
Confidence 1111 1125789999999999987543
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.59 E-value=1.2e-14 Score=121.89 Aligned_cols=190 Identities=12% Similarity=0.051 Sum_probs=123.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
.|||||||+|+||++++++|+++|+. |++++|++.... .....+.+|..+..
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~---V~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~ 54 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYT---VLNIDLSANDQA-------------------------DSNILVDGNKNWTE 54 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEE---EEEEESSCCTTS-------------------------SEEEECCTTSCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCchhcc-------------------------cccceeccccCchh
Confidence 57999999999999999999999987 899999764211 23334445544432
Q ss_pred CCC-CHHHHHHHh--ccccEEEEcceeccc--------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEeCCcccC
Q psy17679 125 LGL-SETDRATLV--KQVNIVFHGAATVRF--------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVSTAFTHC 192 (303)
Q Consensus 125 ~~~-~~~~~~~~~--~~~dvVi~~a~~~~~--------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iSS~~~~~ 192 (303)
... ........+ .++|++|||||.... ...++..+++|+.++..+.+++.+. .+..++|++||..+..
T Consensus 55 ~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~ 134 (235)
T d1ooea_ 55 QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG 134 (235)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS
T ss_pred HHHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcC
Confidence 000 000111111 268999999996321 1234567899999998888888664 2236899999986543
Q ss_pred CCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc--------EEeecceecCccChHHHHHHHHhhhhhhccCCC
Q psy17679 193 PRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV--------HISGTGWIDNVYGPIGMLVGIATGVLHTHLINL 264 (303)
Q Consensus 193 ~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~--------~ii~pg~~~~~~g~~~~~~~~~~~~~~~~~~~~ 264 (303)
+......|..+|...+.+.+.++..+. ..+.||++.+.. ..... . .
T Consensus 135 ------------~~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~-----~~~~~-------~--~ 188 (235)
T d1ooea_ 135 ------------PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-----NRKWM-------P--N 188 (235)
T ss_dssp ------------CCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-----HHHHS-------T--T
T ss_pred ------------CcccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc-----hhhhC-------c--C
Confidence 333456788889888999887754321 456788764422 11111 1 1
Q ss_pred CccccceehhHHHHHHHHHHhhcc
Q psy17679 265 NTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 265 ~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.....|+..+++++.++..+..+.
T Consensus 189 ~~~~~~~~~~~va~~~~~~l~~~~ 212 (235)
T d1ooea_ 189 ADHSSWTPLSFISEHLLKWTTETS 212 (235)
T ss_dssp CCGGGCBCHHHHHHHHHHHHHCGG
T ss_pred CccccCCCHHHHHHHHHHHhcCcc
Confidence 223457889999999987776554
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=3.3e-15 Score=128.25 Aligned_cols=123 Identities=16% Similarity=0.154 Sum_probs=90.3
Q ss_pred CcEE-EEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 44 DKTI-FLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 44 ~~~v-lItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
+|+| |||||+++||++++++|++. |+. |++.+|+.+. ..+..+++... ..++.++++|++
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~---Vi~~~r~~~~--~~~~~~~l~~~-------------~~~~~~~~~Dvs 63 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGD---VVLTARDVTR--GQAAVQQLQAE-------------GLSPRFHQLDID 63 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSE---EEEEESSHHH--HHHHHHHHHHT-------------TCCCEEEECCTT
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCE---EEEEECCHHH--HHHHHHHHHhc-------------CCcEEEEEEecC
Confidence 4555 99999999999999999987 666 9999997532 12222222221 257889999999
Q ss_pred CCCCCCCHHHHHHHh-------ccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc-CCCceEEEEe
Q psy17679 122 LPGLGLSETDRATLV-------KQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM-KDLKAFVHVS 186 (303)
Q Consensus 122 d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~-~~~~r~i~iS 186 (303)
|.+ ++.+++ .++|++|||||.... ...+...+++|+.++..+.+.+.+. .+..|+|++|
T Consensus 64 ~~~------sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnis 137 (275)
T d1wmaa1 64 DLQ------SIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 137 (275)
T ss_dssp CHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CHH------HHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 976 444333 379999999998532 2345678999999999999998765 2336899999
Q ss_pred CCcc
Q psy17679 187 TAFT 190 (303)
Q Consensus 187 S~~~ 190 (303)
|..+
T Consensus 138 S~~~ 141 (275)
T d1wmaa1 138 SIMS 141 (275)
T ss_dssp CHHH
T ss_pred ccce
Confidence 9843
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.58 E-value=1.3e-14 Score=125.52 Aligned_cols=204 Identities=15% Similarity=0.098 Sum_probs=127.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+|+||+++++.|++.|++ |++++|+... ..+..+++... ...++.++.+|+
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~---Vii~~r~~~~--l~~~~~~l~~~------------~g~~~~~~~~D~ 84 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQ---CVIASRKMDV--LKATAEQISSQ------------TGNKVHAIQCDV 84 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH--HHHHHHHHHHH------------HSSCEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEECCHHH--HHHHHHHHHHh------------cCCceEEEEecc
Confidence 578999999999999999999999999987 9999997432 11222222221 125788999999
Q ss_pred CCCCCCCCHHHHHHHh-------ccccEEEEcceecccc-------ccHHHHHhhhHHHHHHHHHHHH----hcCCCceE
Q psy17679 121 SLPGLGLSETDRATLV-------KQVNIVFHGAATVRFD-------EHIKMAVKINVCGVQAMLQLAR----EMKDLKAF 182 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~~-------~~~~~~~~~N~~~~~~ll~~a~----~~~~~~r~ 182 (303)
++.+ ++..++ .++|++|||||..... ..+...+.+|......+...+. ..+....+
T Consensus 85 ~~~~------~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i 158 (294)
T d1w6ua_ 85 RDPD------MVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAF 158 (294)
T ss_dssp TCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred cChH------HHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccc
Confidence 9876 444333 3799999999975431 2345566777776655544332 22245567
Q ss_pred EEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChH------HHHH
Q psy17679 183 VHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPI------GMLV 250 (303)
Q Consensus 183 i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~------~~~~ 250 (303)
+.+||.++... ......|..+|...+.+.+.++..+. +.|.||++.+..... ....
T Consensus 159 ~~~ss~~~~~~------------~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~ 226 (294)
T d1w6ua_ 159 LSITTIYAETG------------SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEK 226 (294)
T ss_dssp EEECCTHHHHC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHH
T ss_pred cccccchhhhc------------ccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHH
Confidence 77777754432 11334466677777777765554432 788899875433211 1111
Q ss_pred HHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 251 GIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..... ++ ..-+...+|+|+++++++.+.+
T Consensus 227 ~~~~~----~p-----l~R~~~pediA~~v~fL~sd~s 255 (294)
T d1w6ua_ 227 EMIGR----IP-----CGRLGTVEELANLAAFLCSDYA 255 (294)
T ss_dssp HHHTT----CT-----TSSCBCHHHHHHHHHHHTSGGG
T ss_pred HHhhc----CC-----CCCCCCHHHHHHHHHHHhCchh
Confidence 11111 11 1125678999999999987543
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.58 E-value=2.6e-14 Score=121.24 Aligned_cols=206 Identities=16% Similarity=0.123 Sum_probs=132.5
Q ss_pred ccCCcEEEEeCCcc--hhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGGTG--FMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGatG--~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+++|++|||||+| +||+++++.|+++|++ |++..|++.. .+.++++... .....++..
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~---V~i~~~~~~~---~~~~~~~~~~-------------~~~~~~~~~ 62 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAE---LAFTYQNDKL---KGRVEEFAAQ-------------LGSDIVLQC 62 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCE---EEEEESSTTT---HHHHHHHHHH-------------TTCCCEEEC
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHHhh-------------cCCcceeec
Confidence 47899999999998 7999999999999998 8888887542 3333333332 145667788
Q ss_pred cCCCCCCCCCHHHHHHHhc-------cccEEEEcceecccc------------ccHHHHHhhhHHHHHHHHHHHHhc-CC
Q psy17679 119 DCSLPGLGLSETDRATLVK-------QVNIVFHGAATVRFD------------EHIKMAVKINVCGVQAMLQLAREM-KD 178 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~-------~~dvVi~~a~~~~~~------------~~~~~~~~~N~~~~~~ll~~a~~~-~~ 178 (303)
|+.+.. +....+. ..|++||+++..... ..+...+.+|+.+...+.+.+... .+
T Consensus 63 ~~~~~~------~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (258)
T d1qsga_ 63 DVAEDA------SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP 136 (258)
T ss_dssp CTTCHH------HHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred ccchHH------HHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 877754 3333332 679999999875321 123345566777788888877664 23
Q ss_pred CceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHH-HHH
Q psy17679 179 LKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGM-LVG 251 (303)
Q Consensus 179 ~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~-~~~ 251 (303)
...+|++||..+.. +...+..|..+|...+.+.+.++..+. +.|.||.+.+....... ...
T Consensus 137 ~~~Ii~iss~~~~~------------~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~ 204 (258)
T d1qsga_ 137 GSALLTLSYLGAER------------AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRK 204 (258)
T ss_dssp EEEEEEEECGGGTS------------BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHH
T ss_pred CcEEEEecchhhcc------------CCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhh
Confidence 35688888886542 233455677777777777766544433 78889988665543211 111
Q ss_pred HHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 252 IATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
.........+. .-+...+|+|+++++++.+.+
T Consensus 205 ~~~~~~~~~pl-----~R~~~peeia~~v~fL~s~~s 236 (258)
T d1qsga_ 205 MLAHCEAVTPI-----RRTVTIEDVGNSAAFLCSDLS 236 (258)
T ss_dssp HHHHHHHHSTT-----SSCCCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHhCCCC-----CCCcCHHHHHHHHHHHhCchh
Confidence 11111111111 125789999999999987543
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=1.5e-14 Score=123.66 Aligned_cols=172 Identities=16% Similarity=0.157 Sum_probs=114.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+++||++++++|+++|+. |++++|+.. +++++...... .....+.++.+|+
T Consensus 11 ~L~GK~alITGassGIG~aiA~~la~~G~~---Vil~~r~~~------~l~~~~~~~~~--------~~~~~~~~~~~d~ 73 (269)
T d1xu9a_ 11 MLQGKKVIVTGASKGIGREMAYHLAKMGAH---VVVTARSKE------TLQKVVSHCLE--------LGAASAHYIAGTM 73 (269)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHHHHH--------HTCSEEEEEECCT
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHHHHHHHHhh--------hhcccchhhhhhh
Confidence 378999999999999999999999999987 999999743 33332221000 1125677788888
Q ss_pred CCCCCCC-CHHHHHHHhccccEEEEcceeccc-------cccHHHHHhhhHHHHHHHHHHHHhc--CCCceEEEEeCCcc
Q psy17679 121 SLPGLGL-SETDRATLVKQVNIVFHGAATVRF-------DEHIKMAVKINVCGVQAMLQLAREM--KDLKAFVHVSTAFT 190 (303)
Q Consensus 121 ~d~~~~~-~~~~~~~~~~~~dvVi~~a~~~~~-------~~~~~~~~~~N~~~~~~ll~~a~~~--~~~~r~i~iSS~~~ 190 (303)
.+..... ...........+|++++|||.... ...+...+++|+.++..+.+.+.+. .+..++|++||..+
T Consensus 74 ~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~ 153 (269)
T d1xu9a_ 74 EDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG 153 (269)
T ss_dssp TCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG
T ss_pred hhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchh
Confidence 7754100 000111222378999999997542 2234678899999988887777543 13468999999976
Q ss_pred cCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC------c--EEeecceecC
Q psy17679 191 HCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR------V--HISGTGWIDN 241 (303)
Q Consensus 191 ~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~------~--~ii~pg~~~~ 241 (303)
.. +...+..|..+|...+.+.+.++..+ . +.+.||.+.+
T Consensus 154 ~~------------~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T 200 (269)
T d1xu9a_ 154 KV------------AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDT 200 (269)
T ss_dssp TS------------CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCC
T ss_pred cC------------CCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCC
Confidence 53 33356678888888888777665332 2 5677987754
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=3e-14 Score=120.23 Aligned_cols=202 Identities=10% Similarity=0.064 Sum_probs=130.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++|++|||||+++||++++++|.+.|+. |++++|+.+... +..+++ .........|+
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~---V~~~~r~~~~~~--~~~~~l----------------~~~~~~~~~~~ 60 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGAS---AVLLDLPNSGGE--AQAKKL----------------GNNCVFAPADV 60 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECTTSSHH--HHHHHH----------------CTTEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCChHHHH--HHHHHh----------------CCCcccccccc
Confidence 478999999999999999999999999997 889999865322 111111 24677788888
Q ss_pred CCCCCCCCHHHHHHH-------hccccEEEEcceeccc-------------cccHHHHHhhhHHHHHHHHHHHHhc----
Q psy17679 121 SLPGLGLSETDRATL-------VKQVNIVFHGAATVRF-------------DEHIKMAVKINVCGVQAMLQLAREM---- 176 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~-------~~~~dvVi~~a~~~~~-------------~~~~~~~~~~N~~~~~~ll~~a~~~---- 176 (303)
.+.. ..... ....|.++++++.... ...+...+++|+.++..+.+++.+.
T Consensus 61 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~ 134 (248)
T d2o23a1 61 TSEK------DVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQN 134 (248)
T ss_dssp TCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred cccc------cccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHh
Confidence 7754 22222 2267888888775321 1245678899999999998887543
Q ss_pred -----CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccCh
Q psy17679 177 -----KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGP 245 (303)
Q Consensus 177 -----~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~ 245 (303)
.+..+||++||.++.. +...+..|..+|...+.+.+.++..+. +.|.||.+.+..-.
T Consensus 135 ~~~~~~~~G~Ii~isS~~~~~------------~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~ 202 (248)
T d2o23a1 135 EPDQGGQRGVIINTASVAAFE------------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT 202 (248)
T ss_dssp CCCTTSCCEEEEEECCTHHHH------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---
T ss_pred hhhccCCceEEEEecchhhcc------------CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhh
Confidence 1234799999997653 233456677777777777776654443 78889977544322
Q ss_pred HHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 246 IGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
. +...........++. ..-+...+|+|+++++++.+
T Consensus 203 ~-~~~~~~~~~~~~~pl----~~R~g~peevA~~v~fL~s~ 238 (248)
T d2o23a1 203 S-LPEKVCNFLASQVPF----PSRLGDPAEYAHLVQAIIEN 238 (248)
T ss_dssp --------CHHHHTCSS----SCSCBCHHHHHHHHHHHHHC
T ss_pred c-CCHHHHHHHHhcCCC----CCCCcCHHHHHHHHHHHHhC
Confidence 1 111111111111111 11256889999999998863
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.49 E-value=4.8e-13 Score=114.26 Aligned_cols=207 Identities=11% Similarity=0.070 Sum_probs=120.2
Q ss_pred ccCCcEEEEeCCcc--hhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGGTG--FMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGatG--~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+++|++|||||+| +||++++++|+++|++ |+++.|++.. .+.++++... .....++..
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~---V~i~~r~~~~---~~~~~~l~~~-------------~~~~~~~~~ 62 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGAT---LAFTYLNESL---EKRVRPIAQE-------------LNSPYVYEL 62 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCE---EEEEESSTTT---HHHHHHHHHH-------------TTCCCEEEC
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHHhh-------------CCceeEeee
Confidence 47899999999887 7999999999999998 8899998542 2333333332 146667899
Q ss_pred cCCCCCCCCCHHHHHHHh-------ccccEEEEcceecccc--------ccHHH---HHhhhHHHHHHHHHHHHhcCCCc
Q psy17679 119 DCSLPGLGLSETDRATLV-------KQVNIVFHGAATVRFD--------EHIKM---AVKINVCGVQAMLQLAREMKDLK 180 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~-------~~~dvVi~~a~~~~~~--------~~~~~---~~~~N~~~~~~ll~~a~~~~~~~ 180 (303)
|+++.. +...++ ..+|++|||++..... ..+.. .+..+...............+..
T Consensus 63 d~~~~~------~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (274)
T d2pd4a1 63 DVSKEE------HFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNG 136 (274)
T ss_dssp CTTCHH------HHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred cccchh------hHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccC
Confidence 998865 333333 3789999999975321 11112 22222333344444443332334
Q ss_pred eEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCc----CCc--EEeecceecCccChHHHHHHHHh
Q psy17679 181 AFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTP----NRV--HISGTGWIDNVYGPIGMLVGIAT 254 (303)
Q Consensus 181 r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~----~~~--~ii~pg~~~~~~g~~~~~~~~~~ 254 (303)
++|+++|+.+... +...+..|..+|...+.+.+.++. ... +.+.||.+.+.......-.....
T Consensus 137 ~~i~~~s~~~~~~-----------~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~ 205 (274)
T d2pd4a1 137 ASVLTLSYLGSTK-----------YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMIL 205 (274)
T ss_dssp EEEEEEECGGGTS-----------BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHH
T ss_pred cceeeeccccccc-----------ccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHH
Confidence 4454544433221 222344566677777776665443 322 78889977654432211000111
Q ss_pred -hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 -GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 -~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
......+ ..-+...+|+|+++++++.+..
T Consensus 206 ~~~~~~~p-----~~r~~~pedIA~~v~fL~S~~s 235 (274)
T d2pd4a1 206 KWNEINAP-----LRKNVSLEEVGNAGMYLLSSLS 235 (274)
T ss_dssp HHHHHHST-----TSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHhhhhh-----ccCCcCHHHHHHHHHHHhChhh
Confidence 1101111 1235789999999999987543
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.42 E-value=1.9e-12 Score=108.10 Aligned_cols=187 Identities=13% Similarity=0.063 Sum_probs=120.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
+|++|||||+++||+++++.|+++|++ |++.+|++.. .+....++|+++.
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~---V~i~~~~~~~---------------------------~~~~~~~~d~~~~ 50 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYR---VVVLDLRREG---------------------------EDLIYVEGDVTRE 50 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE---EEEEESSCCS---------------------------SSSEEEECCTTCH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCccc---------------------------ccceEeeccccch
Confidence 489999999999999999999999998 8899987541 4666788998875
Q ss_pred CCCCCHHHHHHHhc------cccEEEEcceeccc-----------cccHHHHHhhhHHHHHHHHHHHHhc---------C
Q psy17679 124 GLGLSETDRATLVK------QVNIVFHGAATVRF-----------DEHIKMAVKINVCGVQAMLQLAREM---------K 177 (303)
Q Consensus 124 ~~~~~~~~~~~~~~------~~dvVi~~a~~~~~-----------~~~~~~~~~~N~~~~~~ll~~a~~~---------~ 177 (303)
. ....+.. ..+.++++++.... ...+...+++|..+...+...+... +
T Consensus 51 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~ 124 (241)
T d1uaya_ 51 E------DVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEG 124 (241)
T ss_dssp H------HHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTS
T ss_pred h------hhHHHHHhhhccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhccc
Confidence 4 2222222 44566666554211 1234567888888877777665432 1
Q ss_pred CCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChH---HH
Q psy17679 178 DLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPI---GM 248 (303)
Q Consensus 178 ~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~---~~ 248 (303)
+..+||++||..+.. +...+..|..+|...+.+.+.++..+. +.+.||++.+..... ..
T Consensus 125 ~~G~Ii~isS~~~~~------------~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~ 192 (241)
T d1uaya_ 125 QRGVIVNTASVAAFE------------GQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKA 192 (241)
T ss_dssp CSEEEEEECCTHHHH------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHH
T ss_pred Cceeeeeecchhhcc------------CCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhH
Confidence 345899999996643 222455677777777777776654433 788899775433211 11
Q ss_pred HHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 249 LVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
...... ..+ ...-+...+|+|+++++++.+
T Consensus 193 ~~~~~~----~~~----~~~R~g~pedvA~~v~fL~s~ 222 (241)
T d1uaya_ 193 KASLAA----QVP----FPPRLGRPEEYAALVLHILEN 222 (241)
T ss_dssp HHHHHT----TCC----SSCSCCCHHHHHHHHHHHHHC
T ss_pred HHHHHh----cCC----CCCCCcCHHHHHHHHHHHHhC
Confidence 111111 111 111256789999999998863
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.38 E-value=2e-12 Score=109.85 Aligned_cols=204 Identities=10% Similarity=0.053 Sum_probs=119.2
Q ss_pred ccCCcEEEEeCCcc--hhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGGTG--FMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGatG--~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+++|++|||||+| +||++++++|.++|++ |++..|+... ..+.+.+ ....+...+++
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~---Vil~~~~~~~--~~~~~~~---------------~~~~~~~~~~~ 62 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQ---LVLTGFDRLR--LIQRITD---------------RLPAKAPLLEL 62 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCE---EEEEECSCHH--HHHHHHT---------------TSSSCCCEEEC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCE---EEEEeCChHH--HHHHHHH---------------HcCCceeeEee
Confidence 57899999999654 6999999999999998 8888886531 1111111 12356778999
Q ss_pred cCCCCCCCCCHHHHHHH-------h---ccccEEEEcceeccc---------c---ccHHHHHhhhHHHHHHHHHHHHhc
Q psy17679 119 DCSLPGLGLSETDRATL-------V---KQVNIVFHGAATVRF---------D---EHIKMAVKINVCGVQAMLQLAREM 176 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~-------~---~~~dvVi~~a~~~~~---------~---~~~~~~~~~N~~~~~~ll~~a~~~ 176 (303)
|+++.+ +...+ + ..+|+++|+++.... + ..+...+.+|+.........+...
T Consensus 63 dv~~~~------~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (268)
T d2h7ma1 63 DVQNEE------HLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI 136 (268)
T ss_dssp CTTCHH------HHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred eccccc------ccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhh
Confidence 999865 22222 2 257999999997532 1 112334455666666666666554
Q ss_pred CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccC------
Q psy17679 177 KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYG------ 244 (303)
Q Consensus 177 ~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g------ 244 (303)
.+...++.++|..... +...+..|..+|...+.+.+.++..+. +.+.||.+.+...
T Consensus 137 ~~~~~~i~~~s~~~~~------------~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~ 204 (268)
T d2h7ma1 137 MNPGGSIVGMDFDPSR------------AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGG 204 (268)
T ss_dssp EEEEEEEEEEECCCSS------------CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTT
T ss_pred cccccccccccccccc------------cCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccc
Confidence 2233444444443221 222345677777777777776554433 6788997754321
Q ss_pred ---hHH--HHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhh
Q psy17679 245 ---PIG--MLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWS 286 (303)
Q Consensus 245 ---~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 286 (303)
... ............. ...+.+...+|+|+++++++.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~----pl~rr~~~p~dva~~v~fL~Sd 247 (268)
T d2h7ma1 205 ALGEEAGAQIQLLEEGWDQRA----PIGWNMKDATPVAKTVCALLSD 247 (268)
T ss_dssp TTCHHHHHHHHHHHHHHHHHC----TTCCCTTCCHHHHHHHHHHHSS
T ss_pred hhhhhhccchHHHHHHHHhcC----CCCCCCCCHHHHHHHHHHHhCc
Confidence 110 0111111111111 1223356799999999998864
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.37 E-value=2.3e-11 Score=104.03 Aligned_cols=208 Identities=14% Similarity=0.088 Sum_probs=120.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
..+|||||+++||+++++.|+++|+. |++..|.+.. ..+.+.+.+... .......+++|..+..
T Consensus 3 pVAlITGas~GIG~aiA~~la~~Ga~---V~i~~~~~~~--~~~~~~~~l~~~-----------~~~~~~~~~~d~~~~~ 66 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAEGYA---VCLHYHRSAA--EANALSATLNAR-----------RPNSAITVQADLSNVA 66 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHHHHH-----------STTCEEEEECCCSSSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEeCCCHH--HHHHHHHHHHhh-----------cCCceEEEEeeccccc
Confidence 47899999999999999999999998 7777665421 122222222110 1134455555533321
Q ss_pred ----------CCC-CHHHHHHHh-------ccccEEEEcceecccc-------c--------------cHHHHHhhhHHH
Q psy17679 125 ----------LGL-SETDRATLV-------KQVNIVFHGAATVRFD-------E--------------HIKMAVKINVCG 165 (303)
Q Consensus 125 ----------~~~-~~~~~~~~~-------~~~dvVi~~a~~~~~~-------~--------------~~~~~~~~N~~~ 165 (303)
..+ +..++.+++ .++|++|||||..... . .+..++.+|+.+
T Consensus 67 ~~~~~~~~~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 146 (284)
T d1e7wa_ 67 TAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIA 146 (284)
T ss_dssp BCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHH
T ss_pred ccccccccccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheee
Confidence 001 111344433 4799999999975321 0 112367788888
Q ss_pred HHHHHHHHHhc---------CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc-----
Q psy17679 166 VQAMLQLAREM---------KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV----- 231 (303)
Q Consensus 166 ~~~ll~~a~~~---------~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~----- 231 (303)
...+.+.+... ++..++|+++|..... |...+..|..+|...+.+.+.++..+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIr 214 (284)
T d1e7wa_ 147 PYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIR 214 (284)
T ss_dssp HHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred eeeeeccccchhhhhHHHhcCCCCcccccccccccC------------CccceeeeccccccchhhhHHHHHHhCCcccc
Confidence 88777765431 1334677777775432 233455677777777777776654433
Q ss_pred -EEeecceecCccC-hHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 232 -HISGTGWIDNVYG-PIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 232 -~ii~pg~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+.|.||++..... +.......... ++. ..-+...+|+|+++++++.+.+
T Consensus 215 vN~I~PG~t~~~~~~~~~~~~~~~~~----~pl----~~R~~~peeiA~~v~fL~S~~s 265 (284)
T d1e7wa_ 215 VNGVGPGLSVLVDDMPPAVWEGHRSK----VPL----YQRDSSAAEVSDVVIFLCSSKA 265 (284)
T ss_dssp EEEEEESSBCCGGGSCHHHHHHHHTT----CTT----TTSCBCHHHHHHHHHHHHSGGG
T ss_pred ccccccccccccccCCHHHHHHHHhc----CCC----CCCCCCHHHHHHHHHHHhCchh
Confidence 7888996432221 12222222221 111 1125689999999999987543
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.33 E-value=7.9e-11 Score=99.55 Aligned_cols=205 Identities=11% Similarity=0.063 Sum_probs=119.0
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHH-HHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERL-DAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l-~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
.+.|||||+++||+++++.|+++|++ |++.+|+.... .+++ +++.. .......+...|..+.
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~---Vvi~~r~~~~~--~~~~~~~~~~------------~~~~~~~~~~~~~~~~ 64 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFR---VVVHYRHSEGA--AQRLVAELNA------------ARAGSAVLCKGDLSLS 64 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHHH--HHHHHHHHHH------------HSTTCEEEEECCCSSS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCchHH--HHHHHHHHHh------------hcCCceEEEecccccc
Confidence 46899999999999999999999998 88999875422 1222 12211 1124666777777654
Q ss_pred CCCCCHHHHHH-------HhccccEEEEcceecccc------------------ccHHHHHhhhHHHHHHHHHHHHhc--
Q psy17679 124 GLGLSETDRAT-------LVKQVNIVFHGAATVRFD------------------EHIKMAVKINVCGVQAMLQLAREM-- 176 (303)
Q Consensus 124 ~~~~~~~~~~~-------~~~~~dvVi~~a~~~~~~------------------~~~~~~~~~N~~~~~~ll~~a~~~-- 176 (303)
.. ....+.. .+.++|++|||||..... ..+...+..|..+...........
T Consensus 65 ~~--~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (266)
T d1mxha_ 65 SS--LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG 142 (266)
T ss_dssp TT--HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-
T ss_pred hh--HHHHHHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccc
Confidence 41 1112222 233799999999974321 112234444555555444444332
Q ss_pred ------CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccC
Q psy17679 177 ------KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYG 244 (303)
Q Consensus 177 ------~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g 244 (303)
.....++.+|+..+.. +...+..|..+|...+.+.+.++..+. +.|.||.+.+...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~ 210 (266)
T d1mxha_ 143 EGGAWRSRNLSVVNLCDAMTDL------------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPA 210 (266)
T ss_dssp ------CCCEEEEEECCGGGGS------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSS
T ss_pred cccccccccccchhhhhccccc------------cCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEecccc
Confidence 0223455556554432 333566677777777777766544332 7888997753322
Q ss_pred -hHHHHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 245 -PIGMLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+......+.... + ..+-+...+|+|+++++++.+.+
T Consensus 211 ~~~~~~~~~~~~~----p----l~r~~~~peeva~~v~fL~s~~s 247 (266)
T d1mxha_ 211 MPQETQEEYRRKV----P----LGQSEASAAQIADAIAFLVSKDA 247 (266)
T ss_dssp SCHHHHHHHHTTC----T----TTSCCBCHHHHHHHHHHHHSGGG
T ss_pred CCHHHHHHHHhcC----C----CCCCCCCHHHHHHHHHHHhCchh
Confidence 222322222211 1 11234679999999999997654
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.29 E-value=4.3e-11 Score=102.96 Aligned_cols=226 Identities=10% Similarity=-0.023 Sum_probs=117.7
Q ss_pred ccCCcEEEEeCCcc--hhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 41 FYRDKTIFLTGGTG--FMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 41 ~~~~~~vlItGatG--~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
.+++|++|||||+| +||+++++.|+++|.+ |++..|++........+.. ......++.. .......-.....
T Consensus 5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~---Vvi~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~ 78 (297)
T d1d7oa_ 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAE---ILVGTWVPALNIFETSLRR--GKFDQSRVLP-DGSLMEIKKVYPL 78 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCE---EEEEEEHHHHHHHHHHHHT--TTTTGGGBCT-TSSBCCEEEEEEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCE---EEEEeCchhhhhhHHHHHH--hhhhhhhhhh-hhhhhhhhhhhhh
Confidence 47899999999887 8999999999999998 8888875321111111000 0000000000 0000011112233
Q ss_pred cCC--------------------CCCC-CCCHHHHHHHhccccEEEEcceeccc---------cccHHHHHhhhHHHHHH
Q psy17679 119 DCS--------------------LPGL-GLSETDRATLVKQVNIVFHGAATVRF---------DEHIKMAVKINVCGVQA 168 (303)
Q Consensus 119 Dl~--------------------d~~~-~~~~~~~~~~~~~~dvVi~~a~~~~~---------~~~~~~~~~~N~~~~~~ 168 (303)
|.. +... ..-.+.+.+.+.++|++|||||.... ...|...+++|+.+...
T Consensus 79 ~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~ 158 (297)
T d1d7oa_ 79 DAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVS 158 (297)
T ss_dssp CTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred hhhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhh
Confidence 311 1110 00001112223489999999997421 22356788999999999
Q ss_pred HHHHHHhc-CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHh----hCc-CCc--EEeecceec
Q psy17679 169 MLQLAREM-KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSE----MTP-NRV--HISGTGWID 240 (303)
Q Consensus 169 ll~~a~~~-~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~----~~~-~~~--~ii~pg~~~ 240 (303)
+.+.+... ....+++.+++....... ......|..+|.....+.+. +.. ... +.+.||++.
T Consensus 159 ~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~ 227 (297)
T d1d7oa_ 159 LLSHFLPIMNPGGASISLTYIASERII-----------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLG 227 (297)
T ss_dssp HHHHHGGGEEEEEEEEEEECGGGTSCC-----------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCB
T ss_pred hhhHHHHHhhcCCcceeeeehhhcccc-----------cccccceecccccccccccccchhccccceEEeccccccccc
Confidence 99888765 122356666666432211 11223344555444444443 222 122 788899886
Q ss_pred CccChHH-HHHHHHhhhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 241 NVYGPIG-MLVGIATGVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 241 ~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
+...... .............+ ...+...+|+|+++++++...+
T Consensus 228 T~~~~~~~~~~~~~~~~~~~~P-----lgR~~~peevA~~v~fL~S~~a 271 (297)
T d1d7oa_ 228 SRAAKAIGFIDTMIEYSYNNAP-----IQKTLTADEVGNAAAFLVSPLA 271 (297)
T ss_dssp CCCSSCCSHHHHHHHHHHHHSS-----SCCCBCHHHHHHHHHHHTSGGG
T ss_pred chhhhhccCCHHHHHHHHhCCC-----CCCCCCHHHHHHHHHHHhCchh
Confidence 5543221 11111111111111 1125789999999999987543
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.22 E-value=2.7e-10 Score=99.54 Aligned_cols=181 Identities=8% Similarity=0.037 Sum_probs=103.2
Q ss_pred CcEEEEeC--CcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe---
Q psy17679 44 DKTIFLTG--GTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG--- 118 (303)
Q Consensus 44 ~~~vlItG--atG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~--- 118 (303)
+|.+|||| ++.+||+++++.|.++|.+ |.+..|+.... ..............................+
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~---V~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVK---IIFGIWPPVYN---IFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDAS 75 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCE---EEEEECGGGHH---HHHHHHHTTTTTGGGEETTTEECCEEEEEECCTT
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCE---EEEEeCchhhh---hhhHHHHHHhhhhHHHHHHHhhhhhhhcccccce
Confidence 47899999 5679999999999999998 77777754321 1111111111111111111111112223333
Q ss_pred -----------------cCCCCCC-CCCHHHHHHHhccccEEEEcceeccc---------cccHHHHHhhhHHHHHHHHH
Q psy17679 119 -----------------DCSLPGL-GLSETDRATLVKQVNIVFHGAATVRF---------DEHIKMAVKINVCGVQAMLQ 171 (303)
Q Consensus 119 -----------------Dl~d~~~-~~~~~~~~~~~~~~dvVi~~a~~~~~---------~~~~~~~~~~N~~~~~~ll~ 171 (303)
|+.+... ..-...+.+.+.++|++||+||.... ...|...+++|+.+...+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k 155 (329)
T d1uh5a_ 76 FDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCK 155 (329)
T ss_dssp CSSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ehhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHH
Confidence 3333330 00001122333489999999996431 23467788999999988888
Q ss_pred HHHhc-CCCceEEEEeCCcccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHhhCcCC-----c--EEeecceecC
Q psy17679 172 LAREM-KDLKAFVHVSTAFTHCPRERIDEEFYPVPLKYENLIQLISETGDEELSEMTPNR-----V--HISGTGWIDN 241 (303)
Q Consensus 172 ~a~~~-~~~~r~i~iSS~~~~~~~~~~~E~~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~-----~--~ii~pg~~~~ 241 (303)
.+.+. .+..++|.+||..+.... |. ..+.|..+|...+.+.+.++..+ . +.|.||.+.+
T Consensus 156 ~~~~~m~~~GsIv~iss~~~~~~~----------p~-y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T 222 (329)
T d1uh5a_ 156 YFVNIMKPQSSIISLTYHASQKVV----------PG-YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222 (329)
T ss_dssp HHGGGEEEEEEEEEEECGGGTSCC----------TT-CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred HHHhhcccccccccceeehhcccc----------cc-cchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence 88765 234689999988654321 11 12346667777777776554332 2 6788997644
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.21 E-value=2.2e-10 Score=96.31 Aligned_cols=205 Identities=9% Similarity=-0.067 Sum_probs=113.6
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
||.||||||+++||++++++|++.|++ |++++|+... ...|+.+.
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~---V~~~~~~~~~--------------------------------~~~d~~~~ 45 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQ---IVGIDIRDAE--------------------------------VIADLSTA 45 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSSSS--------------------------------EECCTTSH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECChHH--------------------------------HHHHhcCH
Confidence 578999999999999999999999998 8888886431 13344433
Q ss_pred CCCCCHHHHHHH----hccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhc---CCCceEEEEeCCcccCCCC-
Q psy17679 124 GLGLSETDRATL----VKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREM---KDLKAFVHVSTAFTHCPRE- 195 (303)
Q Consensus 124 ~~~~~~~~~~~~----~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~---~~~~r~i~iSS~~~~~~~~- 195 (303)
.. ........ ...+|+++|+|+.......+.....+|..+...+.+..... ........+++........
T Consensus 46 ~~--~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (257)
T d1fjha_ 46 EG--RKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFD 123 (257)
T ss_dssp HH--HHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGG
T ss_pred HH--HHHHHHHHHHHhCCCCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhh
Confidence 20 00011111 12589999999987666667777778888777666554332 1344556666553221100
Q ss_pred --cccc------------C-CCCCCCChhhHHHHHHHHHHHHHHhhCcCCc------EEeecceecCccChHHHHHHHHh
Q psy17679 196 --RIDE------------E-FYPVPLKYENLIQLISETGDEELSEMTPNRV------HISGTGWIDNVYGPIGMLVGIAT 254 (303)
Q Consensus 196 --~~~E------------~-~~~~~~~~~~~~~~~k~~~E~~~~~~~~~~~------~ii~pg~~~~~~g~~~~~~~~~~ 254 (303)
+... . ....+......|..+|...+.+.+.++..+. +.|.||++.+......+-.....
T Consensus 124 ~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~ 203 (257)
T d1fjha_ 124 KNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYG 203 (257)
T ss_dssp GCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------
T ss_pred hhhhhhhccCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHH
Confidence 0000 0 0001112234588888888888887755443 78889987544321111100000
Q ss_pred hhhhhccCCCCccccceehhHHHHHHHHHHhhcc
Q psy17679 255 GVLHTHLINLNTVTDMVPVDLVVNSMISIAWSIG 288 (303)
Q Consensus 255 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 288 (303)
..+........-+...+|+|+++++++...+
T Consensus 204 ---~~~~~~~~PlgR~g~p~eva~~v~fL~S~~s 234 (257)
T d1fjha_ 204 ---ESIAKFVPPMGRRAEPSEMASVIAFLMSPAA 234 (257)
T ss_dssp --------CCCSTTSCCCTHHHHHHHHHHTSGGG
T ss_pred ---HHHHhcCCCCCCCcCHHHHHHHHHHHhCchh
Confidence 0111000111235789999999999887543
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.07 E-value=1.6e-10 Score=93.00 Aligned_cols=85 Identities=22% Similarity=0.215 Sum_probs=65.7
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEec
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGD 119 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~D 119 (303)
..+++|+|+||||+|+||+.+++.|++.|+. |++++|+.... +.+.+.+... .++.+..+|
T Consensus 19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~---V~~~~r~~~~~---~~~~~~~~~~-------------~~~~~~~~d 79 (191)
T d1luaa1 19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAE---VVLCGRKLDKA---QAAADSVNKR-------------FKVNVTAAE 79 (191)
T ss_dssp SCCTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSHHHH---HHHHHHHHHH-------------HTCCCEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHhhccc---hhhcccchHHH---HHHHHHHHhc-------------cchhhhhhh
Confidence 3578899999999999999999999999987 89999975321 1221111110 355678899
Q ss_pred CCCCCCCCCHHHHHHHhccccEEEEcceec
Q psy17679 120 CSLPGLGLSETDRATLVKQVNIVFHGAATV 149 (303)
Q Consensus 120 l~d~~~~~~~~~~~~~~~~~dvVi~~a~~~ 149 (303)
+++.. ++.+++.++|+||||||..
T Consensus 80 ~~~~~------~~~~~~~~iDilin~Ag~g 103 (191)
T d1luaa1 80 TADDA------SRAEAVKGAHFVFTAGAIG 103 (191)
T ss_dssp CCSHH------HHHHHTTTCSEEEECCCTT
T ss_pred cccHH------HHHHHhcCcCeeeecCccc
Confidence 99876 7889999999999999963
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.10 E-value=3.4e-05 Score=58.06 Aligned_cols=120 Identities=15% Similarity=0.113 Sum_probs=75.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|+||+|.+|.+++..|+..|. ...+..+++.++.........++ .+ ... .....+.....--.+
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l-~~el~L~D~~~~~~~~~g~a~Dl-~~----~~~----~~~~~~~~~~~~~~d-- 68 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPF-MKDLVLIGREHSINKLEGLREDI-YD----ALA----GTRSDANIYVESDEN-- 68 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT-CCEEEEEECGGGHHHHHHHHHHH-HH----HHT----TSCCCCEEEEEETTC--
T ss_pred CEEEEECCCChHHHHHHHHHHhCCc-ccccccccchhhhHhhhcccccc-hh----ccc----ccccCCccccCCcch--
Confidence 6899999999999999999998864 23588888864321111111111 11 001 111233333221111
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEE
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHV 185 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~i 185 (303)
...++++|+||-+||... ...+..++++.|..-...+++.+.+. ..+.++.+
T Consensus 69 --------~~~l~~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~-~~~~iivV 121 (145)
T d1hyea1 69 --------LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-CDTKIFVI 121 (145)
T ss_dssp --------GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CCCEEEEC
T ss_pred --------HHHhccceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhcc-CCCeEEEE
Confidence 134578899999999754 35567889999999999999999887 44555434
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.08 E-value=2.2e-05 Score=58.12 Aligned_cols=73 Identities=16% Similarity=0.214 Sum_probs=54.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|+|+|+ |.+|+.+++.|.+.|++ |.++++++. +++.+.+. .++.++.||.++++
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~---v~vid~d~~------~~~~~~~~--------------~~~~vi~Gd~~~~~ 56 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHD---IVLIDIDKD------ICKKASAE--------------IDALVINGDCTKIK 56 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCHH------HHHHHHHH--------------CSSEEEESCTTSHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCC---cceecCChh------hhhhhhhh--------------hhhhhccCcccchh
Confidence 78999996 99999999999999988 888888643 22222211 36779999999976
Q ss_pred CCCCHHHHHHH-hccccEEEEcce
Q psy17679 125 LGLSETDRATL-VKQVNIVFHGAA 147 (303)
Q Consensus 125 ~~~~~~~~~~~-~~~~dvVi~~a~ 147 (303)
.+..+ ++++|.++-+..
T Consensus 57 ------~l~~~~i~~a~~vv~~t~ 74 (132)
T d1lssa_ 57 ------TLEDAGIEDADMYIAVTG 74 (132)
T ss_dssp ------HHHHTTTTTCSEEEECCS
T ss_pred ------hhhhcChhhhhhhcccCC
Confidence 45555 358888886533
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.07 E-value=2.6e-05 Score=58.72 Aligned_cols=115 Identities=14% Similarity=0.093 Sum_probs=76.5
Q ss_pred EEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCCC
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPGL 125 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~ 125 (303)
||.|+||+|.+|++++..|...|. +.++..++.++. .....++ .. ........ .-+.. .
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~-~~elvLiDi~~~----~~~a~Dl---------~~--~~~~~~~~---~~~~~-~- 60 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPL-VSRLTLYDIAHT----PGVAADL---------SH--IETRATVK---GYLGP-E- 60 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTT-CSEEEEEESSSH----HHHHHHH---------TT--SSSSCEEE---EEESG-G-
T ss_pred eEEEECCCChHHHHHHHHHHhCCc-cceEEEEecccc----chhhHHH---------hh--hhhhcCCC---eEEcC-C-
Confidence 799999999999999999988864 356888887532 1111111 10 01111111 11111 1
Q ss_pred CCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy17679 126 GLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVST 187 (303)
Q Consensus 126 ~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS 187 (303)
...+.++++|+||.+||... ...+..++++.|..-.+.+++.+.+. +.+.++.+-|
T Consensus 61 -----~~~~~~~~aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~-~p~~iiivvt 117 (144)
T d1mlda1 61 -----QLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICIIS 117 (144)
T ss_dssp -----GHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred -----ChHHHhCCCCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhc-CCCeEEEEec
Confidence 46778899999999999744 34566788899999999999999998 5555544443
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.00 E-value=6.4e-05 Score=56.51 Aligned_cols=116 Identities=11% Similarity=0.035 Sum_probs=72.1
Q ss_pred cEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
|||.|+|++|.+|++++..|... +. ...+..++..+. . .....++ ... ........+ ...
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~-~~el~L~D~~~~-~--~g~a~Dl---------~h~--~~~~~~~~~----~~~ 61 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAPV-T--PGVAVDL---------SHI--PTAVKIKGF----SGE 61 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCT-TCEEEEECSSTT-H--HHHHHHH---------HTS--CSSCEEEEE----CSS
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCC-CcEEEEeccccc-c--hhHHHHH---------HCC--ccccCCcEE----EcC
Confidence 68999999999999999888644 32 244878876532 1 1111111 110 111122221 111
Q ss_pred CCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVS 186 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iS 186 (303)
. .+ ..+++.|+||-+||... ...+..+++..|..-.+.+.+.+.+......++.+|
T Consensus 62 ~------~~-~~~~~aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt 118 (145)
T d2cmda1 62 D------AT-PALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT 118 (145)
T ss_dssp C------CH-HHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred C------Cc-cccCCCCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence 1 23 46789999999999753 455667888999999999999998883233345444
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.82 E-value=0.00023 Score=53.15 Aligned_cols=114 Identities=11% Similarity=0.066 Sum_probs=73.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
.||.|+||+|.+|.+++..|..++. ..++..++.............++ .+. .. ......+..+|..+
T Consensus 1 sKV~IiGaaG~VG~~~A~~l~~~~l-~~el~L~Di~~~~~~~~g~a~Dl-~~~----~~-----~~~~~~i~~~~~~~-- 67 (142)
T d1o6za1 1 TKVSVVGAAGTVGAAAGYNIALRDI-ADEVVFVDIPDKEDDTVGQAADT-NHG----IA-----YDSNTRVRQGGYED-- 67 (142)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-CSEEEEECCGGGHHHHHHHHHHH-HHH----HT-----TTCCCEEEECCGGG--
T ss_pred CeEEEECCCCcHHHHHHHHHHhCCC-CCEEEEEecCCcccccceeecch-hhc----cc-----ccCCceEeeCCHHH--
Confidence 3799999999999999999999865 34577777643211111111111 111 11 01334444444322
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEE
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFV 183 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i 183 (303)
++++|+||-+||... ...+..+.++.|..-.+.+.+.+.+. +.+.++
T Consensus 68 -----------~~~aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~-~p~~i~ 115 (142)
T d1o6za1 68 -----------TAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYIS 115 (142)
T ss_dssp -----------GTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEE
T ss_pred -----------hhhcCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhc-CCCceE
Confidence 368899999999754 34567889999999999999999988 444433
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.76 E-value=0.00011 Score=55.23 Aligned_cols=116 Identities=13% Similarity=0.112 Sum_probs=70.2
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
.|||.|.|+ |.+|.+++..|+..|. ...|.++++.+.... ....++ . +.... ........+|+.
T Consensus 5 ~~KI~IIGa-G~VG~~~A~~l~~~~~-~~elvL~D~~~~~~~--g~a~Dl-~----~a~~~-----~~~~~~~~~d~~-- 68 (146)
T d1ez4a1 5 HQKVVLVGD-GAVGSSYAFAMAQQGI-AEEFVIVDVVKDRTK--GDALDL-E----DAQAF-----TAPKKIYSGEYS-- 68 (146)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHHH--HHHHHH-H----GGGGG-----SCCCEEEECCGG--
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-CcEEEEeecccchhH--HHHHHH-h----ccccc-----cCCceEeeccHH--
Confidence 468999995 9999999999999864 245999998643211 111111 1 11111 123344455532
Q ss_pred CCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVST 187 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS 187 (303)
.++++|+||.++|.... ..+..+.+..|..-...+.+.+.+. +.+.++.+-|
T Consensus 69 -----------~~~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~-~p~aivivvt 121 (146)
T d1ez4a1 69 -----------DCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAA 121 (146)
T ss_dssp -----------GGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred -----------HhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEeC
Confidence 24688999999997543 4455677788998899999999888 5555554433
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.74 E-value=0.00053 Score=51.85 Aligned_cols=122 Identities=12% Similarity=0.063 Sum_probs=71.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCC--CccEE-EEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCP--HLKHI-YLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~--~v~~V-~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+||.|+||+|++|++++..|...+. +...+ .-+..........+.+...... ........+...
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~- 71 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED-----------CAFPLLAGLEAT- 71 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT-----------TTCTTEEEEEEE-
T ss_pred CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhc-----------cccccccccccC-
Confidence 56999999999999999999987642 11111 1122221111111111111111 011233333332
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCC-ceEEEEe
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDL-KAFVHVS 186 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~-~r~i~iS 186 (303)
+ .....+++.|+||-++|... ...+..+.+..|..-.+.+.+.+.+.... ..++.+|
T Consensus 72 -~--------~~~~~~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs 130 (154)
T d1y7ta1 72 -D--------DPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG 130 (154)
T ss_dssp -S--------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred -C--------chhhhcccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 1 24677899999999999764 35567788899999999999998885222 3344444
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.72 E-value=0.00065 Score=52.45 Aligned_cols=121 Identities=14% Similarity=0.077 Sum_probs=75.0
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhc---CC-CccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceE-EEE
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRS---CP-HLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVS-AVA 117 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~---g~-~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~-~~~ 117 (303)
+..||.||||+|.+|++++..|... |. ....++.++....... .+.+. ..+... ..+... .+.
T Consensus 23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~-l~g~~--------mdl~d~---a~~~~~~~~~ 90 (175)
T d7mdha1 23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQA-LEGVA--------MELEDS---LYPLLREVSI 90 (175)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHH-HHHHH--------HHHHTT---TCTTEEEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccch-hcchh--------hhhccc---ccccccCccc
Confidence 4458999999999999999999764 22 2123555555432111 11111 011110 012222 222
Q ss_pred ecCCCCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCC-CceEEEEe
Q psy17679 118 GDCSLPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKD-LKAFVHVS 186 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~-~~r~i~iS 186 (303)
++ ...+.+++.|+||-.+|... ......+.+..|..-.+.+.+.+.+... ..+++.+|
T Consensus 91 ~~-----------~~~~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 91 GI-----------DPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp ES-----------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred cc-----------cchhhccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 22 25678899999999999764 4667888999999999999999988622 23454444
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.68 E-value=0.00037 Score=52.72 Aligned_cols=119 Identities=16% Similarity=0.069 Sum_probs=74.9
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
+.+||.|.|+ |.+|..++..|...+. ..+.+++.++..... ...++ .+. .+.. .........+
T Consensus 6 k~~KI~IIGa-G~VG~~lA~~l~~~~~--~el~L~D~~~~~~~g--~a~Dl-~~~----~~~~----~~~~~~~~~~--- 68 (154)
T d1pzga1 6 RRKKVAMIGS-GMIGGTMGYLCALREL--ADVVLYDVVKGMPEG--KALDL-SHV----TSVV----DTNVSVRAEY--- 68 (154)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSSHHHH--HHHHH-HHH----HHHT----TCCCCEEEEC---
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCC--ceEEEEEeccccchh--HHHHH-hhh----cccc----CCeeEEeccC---
Confidence 4579999997 9999999998888864 358888877653221 11111 110 0000 0111111111
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceecccc------ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeC
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVRFD------EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVST 187 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~------~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS 187 (303)
.+...+++.|+|+-++|..... .+...++..|..-...+++.+.+. +.+.++.+-|
T Consensus 69 --------~~~~~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~-~p~aiviivs 130 (154)
T d1pzga1 69 --------SYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIVVT 130 (154)
T ss_dssp --------SHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred --------chhhhhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEeC
Confidence 2556778999999999975421 255677888999999999999888 5555554433
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.65 E-value=0.00037 Score=52.38 Aligned_cols=117 Identities=15% Similarity=0.084 Sum_probs=74.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.++||.|+|+ |.+|.+++..|+..|. +.+|..+++.++... ....++. + ........+.+...|.
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l-~~el~L~Di~~~~~~--g~a~Dl~-~--------~~~~~~~~~~~~~~d~-- 69 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANESKAI--GDAMDFN-H--------GKVFAPKPVDIWHGDY-- 69 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHHH--HHHHHHH-H--------HTTSSSSCCEEEECCG--
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCC-CceEEEEeecccccc--chhccHh-h--------CccccCCCeEEEECCH--
Confidence 4578999996 9999999999999865 356888888653221 1111111 1 0111113444444443
Q ss_pred CCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEE
Q psy17679 123 PGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHV 185 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~i 185 (303)
..++++|+||.++|... ......+.+..|..-.+.+++.+.+......++.+
T Consensus 70 -----------~~l~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivv 122 (148)
T d1ldna1 70 -----------DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVA 122 (148)
T ss_dssp -----------GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred -----------HHhccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Confidence 23467899999999754 34455677788998888999888887223344443
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.57 E-value=0.00054 Score=51.81 Aligned_cols=112 Identities=13% Similarity=0.071 Sum_probs=67.6
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCC----CccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEe
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCP----HLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAG 118 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~----~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 118 (303)
+.+||.|+||+|.+|++++..|+..+- ....+..++.... ....+.+-- .+... .......+.
T Consensus 2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~----~~~~~~l~~-----~~~~~---~~~~~~~~~- 68 (154)
T d5mdha1 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM----MGVLDGVLM-----ELQDC---ALPLLKDVI- 68 (154)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG----HHHHHHHHH-----HHHHT---CCTTEEEEE-
T ss_pred CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccc----hhhhhhhhh-----hhccc---ccccccccc-
Confidence 467999999999999999999976521 2223444444322 122211110 00000 012222222
Q ss_pred cCCCCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhc
Q psy17679 119 DCSLPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREM 176 (303)
Q Consensus 119 Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~ 176 (303)
..+ .....++++|+||-++|... ...+..+.+..|..-.+.+.+.+.+.
T Consensus 69 -~~~--------~~~~~~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~ 118 (154)
T d5mdha1 69 -ATD--------KEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY 118 (154)
T ss_dssp -EES--------CHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred -cCc--------ccccccCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence 122 24577789999999999754 34556677888998889998888664
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.57 E-value=0.00051 Score=50.36 Aligned_cols=72 Identities=17% Similarity=0.248 Sum_probs=53.0
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+++|.|+ |.+|+++++.|.+.|++ |++++.++. +++.+. .....++.+|.++++
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~---vvvid~d~~------~~~~~~---------------~~~~~~~~gd~~~~~ 55 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHE---VLAVDINEE------KVNAYA---------------SYATHAVIANATEEN 55 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCC---CEEEESCHH------HHHHTT---------------TTCSEEEECCTTCTT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCe---EEEecCcHH------HHHHHH---------------HhCCcceeeecccch
Confidence 56888975 99999999999999998 778887643 222211 145678899999987
Q ss_pred CCCCHHHHHHH-hccccEEEEcce
Q psy17679 125 LGLSETDRATL-VKQVNIVFHGAA 147 (303)
Q Consensus 125 ~~~~~~~~~~~-~~~~dvVi~~a~ 147 (303)
.+..+ ++++|.||-+.+
T Consensus 56 ------~l~~a~i~~a~~vi~~~~ 73 (134)
T d2hmva1 56 ------ELLSLGIRNFEYVIVAIG 73 (134)
T ss_dssp ------HHHHHTGGGCSEEEECCC
T ss_pred ------hhhccCCccccEEEEEcC
Confidence 56665 568898875544
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.55 E-value=0.00014 Score=56.04 Aligned_cols=75 Identities=13% Similarity=0.205 Sum_probs=50.5
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
.|+|+|.|| |++|+++++.|.+.|++ |++..|+.. +.+++... .........+....
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~---V~v~dr~~~------~a~~l~~~-------------~~~~~~~~~~~~~~ 58 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIK---VTVACRTLE------SAKKLSAG-------------VQHSTPISLDVNDD 58 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCE---EEEEESCHH------HHHHHHTT-------------CTTEEEEECCTTCH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCE---EEEEECChH------HHHHHHhc-------------ccccccccccccch
Confidence 478999986 99999999999999987 999999853 33222221 13333444444332
Q ss_pred CCCCCHHHHHHHhccccEEEEcce
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAA 147 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~ 147 (303)
. .....+...|.++.+..
T Consensus 59 ~------~~~~~i~~~~~~i~~~~ 76 (182)
T d1e5qa1 59 A------ALDAEVAKHDLVISLIP 76 (182)
T ss_dssp H------HHHHHHTTSSEEEECSC
T ss_pred h------hhHhhhhccceeEeecc
Confidence 2 45666778888886543
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.54 E-value=0.00028 Score=55.00 Aligned_cols=85 Identities=16% Similarity=0.127 Sum_probs=59.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
.++++|+|.|+ |+.|++++..|.+.|. ..|++..|+.+.......+.+.+... ........++.
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g~--~~i~i~nR~~~~~~~~~~l~~~~~~~-------------~~~~~~~~~~~ 79 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEGL--KEIKLFNRRDEFFDKALAFAQRVNEN-------------TDCVVTVTDLA 79 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTTHHHHHHHHHHHHHH-------------SSCEEEEEETT
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcCC--ceEeeeccchHHHHHHHHHHHHHHhh-------------cCcceEeeecc
Confidence 56789999995 8999999999999865 46999999866443222222111111 34446677777
Q ss_pred CCCCCCCHHHHHHHhccccEEEEccee
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAAT 148 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~ 148 (303)
+.. .+......+|+|||+...
T Consensus 80 ~~~------~~~~~~~~~diiIN~Tp~ 100 (182)
T d1vi2a1 80 DQQ------AFAEALASADILTNGTKV 100 (182)
T ss_dssp CHH------HHHHHHHTCSEEEECSST
T ss_pred ccc------chhhhhcccceeccccCC
Confidence 654 577777899999999875
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.51 E-value=0.00079 Score=50.09 Aligned_cols=114 Identities=13% Similarity=0.012 Sum_probs=72.7
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|+|| |.+|++++..|+..|. +.++.++++++....... .++...... ......+...+ +
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l-~~el~L~Di~~~~~~~~~--~d~~~~~~~---------~~~~~~i~~~~--~-- 63 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQL-ARELVLLDVVEGIPQGKA--LDMYESGPV---------GLFDTKVTGSN--D-- 63 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSSSHHHHHH--HHHHTTHHH---------HTCCCEEEEES--C--
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC-CceEEEeccccccchhhh--hhhhcccch---------hcccceEEecC--C--
Confidence 68999996 9999999999998864 346889998765332111 111110000 01233333221 1
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEE
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVH 184 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~ 184 (303)
.+.++++|+||-+||... ........+..|..-.+.+++.+.+. +.+.++.
T Consensus 64 --------~~~~~dadvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~-~p~aivi 115 (142)
T d1guza1 64 --------YADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIII 115 (142)
T ss_dssp --------GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEE
T ss_pred --------HHHhcCCeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhcc-CCCeEEE
Confidence 134578899999999754 34556778888999899999888887 4444443
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.45 E-value=0.00015 Score=54.48 Aligned_cols=39 Identities=8% Similarity=0.171 Sum_probs=31.4
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~~ 82 (303)
||||.|.||||++|+.+++.|+++ .+.+..++.+.++.+
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s 40 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL 40 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence 468999999999999999988876 346667887777654
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.34 E-value=0.00091 Score=50.01 Aligned_cols=114 Identities=12% Similarity=0.153 Sum_probs=69.2
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|+|+ |.+|.+++..|+.+|. ..++..+++++.... ....++.. ... ..........+|..
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~-~~elvL~Di~~~~~~--g~~~Dl~~-----a~~----~~~~~~~~~~~d~~--- 65 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGV-ADDYVFIDANEAKVK--ADQIDFQD-----AMA----NLEAHGNIVINDWA--- 65 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHHH--HHHHHHHH-----HGG----GSSSCCEEEESCGG---
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCC-CceEEEEecccchhh--hHHHhhhc-----ccc----ccCCccceeccCHH---
Confidence 68999995 9999999999999864 345888887643211 11111111 111 11123344444432
Q ss_pred CCCCHHHHHHHhccccEEEEcceeccc-----cccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEE
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVRF-----DEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHV 185 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~~-----~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~i 185 (303)
.++++|+||-+||.... ..+..+.++.|..-.+.+.+.+.+. +...++.+
T Consensus 66 ----------~l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~-~p~aiviv 120 (146)
T d1hyha1 66 ----------ALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLVV 120 (146)
T ss_dssp ----------GGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEEEE
T ss_pred ----------HhccccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEE
Confidence 24788999999997542 2233456777988888899888887 44444433
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.34 E-value=0.0018 Score=49.09 Aligned_cols=119 Identities=14% Similarity=0.078 Sum_probs=75.3
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
....+||-|.|+ |.+|.+++..|...|. +..+..++++++.. .....++. +. ............+|+
T Consensus 17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l-~~ElvLiD~~~~~a--~g~alDl~-h~--------~~~~~~~~~~~~~d~ 83 (160)
T d1i0za1 17 TVPNNKITVVGV-GQVGMACAISILGKSL-ADELALVDVLEDKL--KGEMMDLQ-HG--------SLFLQTPKIVADKDY 83 (160)
T ss_dssp CCCSSEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSCHHHH--HHHHHHHH-HT--------GGGCCCSEEEECSSG
T ss_pred cCCCCeEEEECC-CHHHHHHHHHHHhcCC-CcEEEEEEeccchh--HHHHHHHh-cc--------ccccCCCeEEeccch
Confidence 345579999995 9999999999999975 34588888764322 12222221 10 001112222223332
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCce-EEEEe
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKA-FVHVS 186 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r-~i~iS 186 (303)
. .++++|+||.+||... ...+....+..|..-.+.++..+.+. +.+. ++.+|
T Consensus 84 ~-------------~~~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~-~p~aiiivvt 137 (160)
T d1i0za1 84 S-------------VTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKY-SPDCIIIVVS 137 (160)
T ss_dssp G-------------GGTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred h-------------hcccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeC
Confidence 2 3468899999999754 34556678888999999999988887 4444 44444
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.32 E-value=0.0015 Score=48.57 Aligned_cols=115 Identities=15% Similarity=0.055 Sum_probs=72.2
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEE-ecCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVA-GDCSLP 123 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~-~Dl~d~ 123 (303)
|||.|.|+ |.+|.+++..|+.+|. +..+.+++++++... ....++ . +..+. ......... .|+
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~-~~elvL~Di~~~~~~--g~alDl-~----~~~~~----~~~~~~i~~~~d~--- 64 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLD-VDEIALVDIAEDLAV--GEAMDL-A----HAAAG----IDKYPKIVGGADY--- 64 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSC-CSEEEEECSSHHHHH--HHHHHH-H----HHHHT----TTCCCEEEEESCG---
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCc-CceEEEEecccchhh--HHHHHH-h----hhccc----cCCCCccccCCCH---
Confidence 68999996 9999999999998864 456888887643221 111111 1 11110 001222222 232
Q ss_pred CCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEe
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVS 186 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iS 186 (303)
+.+++.|+||-+||... ......+.+..|..-...+.+.+.+. +...++.+-
T Consensus 65 ----------~~~~~adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~-~p~aivivv 117 (142)
T d1ojua1 65 ----------SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVV 117 (142)
T ss_dssp ----------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEEC
T ss_pred ----------HHhccccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhh-CCCcEEEEe
Confidence 34578899999999654 34566778888999999999998887 444444333
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.31 E-value=0.0027 Score=46.89 Aligned_cols=113 Identities=18% Similarity=0.146 Sum_probs=73.0
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|||.|.|+ |.+|.+++..|+.++. +.++..+++++.... ....++.. . .+ .........+|.
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l-~~el~L~Di~~~~~~--g~~~Dl~~-~----~~-----~~~~~~~~~~~~---- 62 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDKKRAE--GDALDLIH-G----TP-----FTRRANIYAGDY---- 62 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHHH--HHHHHHHH-H----GG-----GSCCCEEEECCG----
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEeccccccc--chhccccc-c----cc-----ccccccccCCcH----
Confidence 68999996 9999999999998864 356888887643211 11111111 0 00 112334433332
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEE
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHV 185 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~i 185 (303)
..++++|+||-+||... ......+.+..|..-.+.+.+.+.+. +...++.+
T Consensus 63 ---------~~~~~adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~-~p~aiviv 114 (140)
T d1a5za1 63 ---------ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIV 114 (140)
T ss_dssp ---------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred ---------HHhcCCCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhc-CCCcEEEE
Confidence 23578899999999754 34556778888998889999999887 44444444
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.30 E-value=0.0022 Score=47.57 Aligned_cols=112 Identities=16% Similarity=0.149 Sum_probs=72.2
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
.||.|.|+ |.+|.+++..|+.+|. +.++.++++.+... .....++ .+. . .......+...+
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l-~~ElvL~D~~~~~~--~g~a~Dl-~~a--------~-~~~~~~~i~~~~----- 62 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGI-AREIVLEDIAKERV--EAEVLDM-QHG--------S-SFYPTVSIDGSD----- 62 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHHHH--HHHHHHH-HHT--------G-GGSTTCEEEEES-----
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC-CcEEEEEEeccccc--hhHHHHH-Hhc--------c-ccCCCceeecCC-----
Confidence 57999996 9999999999998865 34688888764321 1111111 110 0 011223333332
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEE
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFV 183 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i 183 (303)
++ +.++++|+||-+||... ...+..+.+..|..-.+.++..+.+. +.+.++
T Consensus 63 ------~~-~~~~daDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~-~p~ai~ 114 (143)
T d1llda1 63 ------DP-EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIY 114 (143)
T ss_dssp ------CG-GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEE
T ss_pred ------CH-HHhhCCcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhh-CCCeEE
Confidence 11 23567899999999865 35667788899999999999888888 544443
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.26 E-value=0.0031 Score=46.70 Aligned_cols=111 Identities=19% Similarity=0.159 Sum_probs=68.3
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
+||.|.|+ |.+|.+++..|+..+. +.++.++++.+.....+. .++ .... ..........+|
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l-~~el~L~D~~~~~~~g~a--~Dl---------~~~~-~~~~~~~~~~~~----- 62 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQT-ANELVLIDVFKEKAIGEA--MDI---------NHGL-PFMGQMSLYAGD----- 62 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTC-SSEEEEECCC---CCHHH--HHH---------TTSC-CCTTCEEEC--C-----
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeccCCccceee--eee---------ccCc-ccCCCeeEeeCc-----
Confidence 57899996 9999999999999865 456999998775433211 111 1111 111233322222
Q ss_pred CCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEE
Q psy17679 125 LGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFV 183 (303)
Q Consensus 125 ~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i 183 (303)
...++++|+||-+||... ...+....+..|..-...+++.+.+. ..+.++
T Consensus 63 --------~~~~~~adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~-~p~ai~ 113 (142)
T d1y6ja1 63 --------YSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVI 113 (142)
T ss_dssp --------GGGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEE
T ss_pred --------HHHhCCCceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhcc-CCCceE
Confidence 134578899999999754 35566778888999999999999887 444433
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.22 E-value=0.00068 Score=51.49 Aligned_cols=76 Identities=24% Similarity=0.309 Sum_probs=52.9
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++++|+|.|+ |-+|..+++.|...|.. .|++..|+.. +.+++... -+..+. ++
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~--~i~v~nRt~~------ka~~l~~~--------------~~~~~~--~~ 75 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVR--AVLVANRTYE------RAVELARD--------------LGGEAV--RF 75 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCS--EEEEECSSHH------HHHHHHHH--------------HTCEEC--CG
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCCc--EEEEEcCcHH------HHHHHHHh--------------hhcccc--cc
Confidence 356789999996 99999999999999764 5888888743 22222221 122222 22
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceecc
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVR 150 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~ 150 (303)
. ++...+.+.|+||.+.+...
T Consensus 76 ~---------~~~~~l~~~Divi~atss~~ 96 (159)
T d1gpja2 76 D---------ELVDHLARSDVVVSATAAPH 96 (159)
T ss_dssp G---------GHHHHHHTCSEEEECCSSSS
T ss_pred h---------hHHHHhccCCEEEEecCCCC
Confidence 2 57788899999999988543
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.22 E-value=9e-05 Score=57.79 Aligned_cols=35 Identities=29% Similarity=0.360 Sum_probs=31.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
|||.|+||+|.+|+++++.|.+.|++ |.+.+|+++
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~---V~l~~R~~e 35 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHE---IVVGSRREE 35 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCE---EEEEESSHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCE---EEEEECCHH
Confidence 67999999999999999999999998 889999753
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.16 E-value=0.0012 Score=49.96 Aligned_cols=118 Identities=11% Similarity=0.034 Sum_probs=71.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
++..||.|.|+ |.+|.+++..|...|. ...+.++++++... .....++.- ..+...........|+.
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l-~~elvL~D~~~~~a--~g~alDl~~---------~~~~~~~~~~~~~~d~~ 83 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGL-ADELALVDADTDKL--RGEALDLQH---------GSLFLSTPKIVFGKDYN 83 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTS-CSEEEEECSCHHHH--HHHHHHHHH---------TTTTCSCCEEEEESSGG
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCchhh--hccHHHHhC---------cchhcCCCeEEeccchh
Confidence 55568999995 9999999999999865 34588888764321 112222211 11111122222233322
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccc-cccHHHHHhhhHHHHHHHHHHHHhcCCCc-eEEEEe
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRF-DEHIKMAVKINVCGVQAMLQLAREMKDLK-AFVHVS 186 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~-~~~~~~~~~~N~~~~~~ll~~a~~~~~~~-r~i~iS 186 (303)
.++++|+||-+||.... ..+..+.++.|..-.+.++..+.+. +.+ .++.+|
T Consensus 84 -------------~~~~adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~-~p~~ivivvt 136 (159)
T d2ldxa1 84 -------------VSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQN-SPDCKIIVVT 136 (159)
T ss_dssp -------------GGTTEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHH-STTCEEEECS
T ss_pred -------------hhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhcc-CCCeEEEEeC
Confidence 33678999999997543 3445567778888888888877776 433 344443
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.15 E-value=0.00052 Score=55.20 Aligned_cols=81 Identities=23% Similarity=0.232 Sum_probs=54.4
Q ss_pred ccCCcEEEEeCC----------------cchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhc
Q psy17679 41 FYRDKTIFLTGG----------------TGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRA 104 (303)
Q Consensus 41 ~~~~~~vlItGa----------------tG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~ 104 (303)
.+++++||||+| ||-.|.+|++.+..+|++ |+++....+...
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~---V~li~g~~~~~~------------------- 60 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGAN---VTLVSGPVSLPT------------------- 60 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCE---EEEEECSCCCCC-------------------
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCc---hhhhhcccccCc-------------------
Confidence 467788888876 678999999999999998 766666543111
Q ss_pred cCcCcCCceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcceecccc
Q psy17679 105 EVPDFRSKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFD 152 (303)
Q Consensus 105 ~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~ 152 (303)
...+..+...-.+.- ...+...+.++|++|++|+..++.
T Consensus 61 -----p~~~~~~~~~t~~~m----~~~~~~~~~~~D~~i~aAAvsDf~ 99 (223)
T d1u7za_ 61 -----PPFVKRVDVMTALEM----EAAVNASVQQQNIFIGCAAVADYR 99 (223)
T ss_dssp -----CTTEEEEECCSHHHH----HHHHHHHGGGCSEEEECCBCCSEE
T ss_pred -----ccccccceehhhHHH----HHHHHhhhccceeEeeeechhhhh
Confidence 145555554322110 113345556899999999998763
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.14 E-value=0.00017 Score=54.12 Aligned_cols=39 Identities=23% Similarity=0.299 Sum_probs=31.0
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
++++|.|.||||++|..+++.|.+++|....+..++.++
T Consensus 1 q~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~ 39 (144)
T d2hjsa1 1 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE 39 (144)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence 357899999999999999999977666655677665543
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.04 E-value=0.00046 Score=45.57 Aligned_cols=38 Identities=24% Similarity=0.302 Sum_probs=33.3
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG 83 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~ 83 (303)
++.+|+|+||+|.+|...++.+...|++ |++.++++++
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~---Vi~~t~s~~k 68 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQ---VVAVSGREST 68 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCC---EEEEESCGGG
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCe---EEEEECCHHH
Confidence 4578999999999999999988888988 9999987653
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.00 E-value=0.0013 Score=49.12 Aligned_cols=37 Identities=14% Similarity=0.262 Sum_probs=28.9
Q ss_pred cEEEEeCCcchhHHHHHHHHHhc-CCCccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRS-CPHLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~ 81 (303)
|||.|.||||++|..+++.|+++ .|.+..+..++.+.
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~ 38 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ 38 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSC
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccc
Confidence 68999999999999999998875 35555666665543
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.98 E-value=0.0032 Score=46.60 Aligned_cols=113 Identities=17% Similarity=0.140 Sum_probs=66.6
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEE-EecCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAV-AGDCSLP 123 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~-~~Dl~d~ 123 (303)
+||-|.|+ |.+|.+++..|...+. ..+.+++..++.... ...++.-..... .....+. ..|+.
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l--~dl~l~D~~~~~~~~--~~~Dl~~~~~~~---------~~~~~i~~~~d~~-- 65 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKEL--GDIVLLDIVEGVPQG--KALDLYEASPIE---------GFDVRVTGTNNYA-- 65 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSSSSHHHH--HHHHHHTTHHHH---------TCCCCEEEESCGG--
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCc--ceEEEEeeccccchh--HHHHhhcccccc---------CCCCEEEecCcHH--
Confidence 68999996 9999999999988854 358888887653221 111111100000 0122222 22322
Q ss_pred CCCCCHHHHHHHhccccEEEEcceecc-ccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEE
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVR-FDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHV 185 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~-~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~i 185 (303)
.+++.|+||-+||... ...+..+.+..|..-...+++.+.+. +.+.++.+
T Consensus 66 -----------~~~~advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~-~p~aiviv 116 (142)
T d1uxja1 66 -----------DTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIM 116 (142)
T ss_dssp -----------GGTTCSEEEECCSCC---------CHHHHHHHHHHHHHHHGGG-CTTCEEEE
T ss_pred -----------HhcCCCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhcc-CCCceEEE
Confidence 2467899999999754 34555677788998889999999887 54444444
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=96.88 E-value=0.0011 Score=51.05 Aligned_cols=37 Identities=30% Similarity=0.363 Sum_probs=27.5
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|+||.|.||||++|..+++.|.+. .++..+.+.+++.
T Consensus 1 MikVaIvGATGyvG~eLirlL~~H-P~~ei~~l~s~~~ 37 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNH-PEAKITYLSSRTY 37 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC-TTEEEEEEECSTT
T ss_pred CeEEEEECCCcHHHHHHHHHHHhC-CCceEEEeecccc
Confidence 578999999999999999988765 3444444444443
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.84 E-value=0.0058 Score=45.63 Aligned_cols=115 Identities=13% Similarity=0.092 Sum_probs=70.7
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
++||-|.|+ |.+|.+++..|...+ +..+.++++.+.... ....++.--.... ..+..+...+ +
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~--l~el~L~Di~~~~~~--g~a~Dl~~~~~~~---------~~~~~v~~~~--~- 65 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKN--LGDVVLFDIVKNMPH--GKALDTSHTNVMA---------YSNCKVSGSN--T- 65 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECSSSSHHH--HHHHHHHTHHHHH---------TCCCCEEEEC--C-
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCC--CCeEEEEeccCCcce--eeecchhhhcccc---------CCCcEEEecc--c-
Confidence 468999995 999999998777764 456888888765322 1111111100000 1222233222 1
Q ss_pred CCCCCHHHHHHHhccccEEEEcceecccc------ccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEE
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATVRFD------EHIKMAVKINVCGVQAMLQLAREMKDLKAFVHV 185 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~~~~------~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~i 185 (303)
...+++.|+||-++|..... .....++..|..-.+.+++.+.+. ....++.+
T Consensus 66 ---------~~~~~~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~-~p~aiviv 123 (150)
T d1t2da1 66 ---------YDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN-CPNAFIIV 123 (150)
T ss_dssp ---------GGGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred ---------ccccCCCcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhc-CCCeEEEE
Confidence 13346789999999975421 235677888999999999999888 54444433
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=96.82 E-value=0.0011 Score=50.95 Aligned_cols=38 Identities=8% Similarity=0.151 Sum_probs=32.3
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG 83 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~ 83 (303)
.+.+|+|+||+|.+|...++.+...|.. |++.+++++.
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~---vi~~~~~~~~ 64 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMGLR---VLAAASRPEK 64 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCE---EEEEESSGGG
T ss_pred CCCEEEEEeccccchhhhhhhhcccccc---cccccccccc
Confidence 4678999999999999999998888886 8888887543
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.74 E-value=0.0015 Score=50.04 Aligned_cols=36 Identities=11% Similarity=0.134 Sum_probs=31.3
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+.+|||+||+|.+|...++.+...|.+ |+++++++
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~---vi~~~~~~ 63 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLK---ILGTAGTE 63 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESSH
T ss_pred CCCEEEEEeccccccccccccccccCcc---cccccccc
Confidence 4678999999999999999999888887 88888763
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=96.73 E-value=0.0015 Score=50.46 Aligned_cols=37 Identities=11% Similarity=0.088 Sum_probs=32.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.++.+|||+||+|.+|...++-....|.+ |++++|++
T Consensus 28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga~---vi~~~~~~ 64 (182)
T d1v3va2 28 KGGETVLVSAAAGAVGSVVGQIAKLKGCK---VVGAAGSD 64 (182)
T ss_dssp CSSCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESSH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHccCCE---EEEeCCCH
Confidence 35679999999999999999999998887 88999864
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.66 E-value=0.002 Score=49.60 Aligned_cols=39 Identities=18% Similarity=0.200 Sum_probs=33.6
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK 84 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~ 84 (303)
++.+|||+||+|.+|...++-....|.. |++.++++.+.
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~---Viat~~s~~k~ 69 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGYT---VEASTGKAAEH 69 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCC---EEEEESCTTCH
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCCc---eEEecCchHHH
Confidence 3568999999999999999999889988 88999886643
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.52 E-value=0.002 Score=49.63 Aligned_cols=36 Identities=17% Similarity=0.214 Sum_probs=31.2
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
++.+|||+||+|.+|...++.+...|.. |+++++++
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~---vi~~~~~~ 60 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGAR---IYTTAGSD 60 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCE---EEEEESSH
T ss_pred CCCEEEEECCCCCcccccchhhcccccc---ceeeeccc
Confidence 4578999999999999999999888887 88888753
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=96.46 E-value=0.0032 Score=48.26 Aligned_cols=78 Identities=9% Similarity=0.079 Sum_probs=51.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
.+.+|+|+||+|.+|..+++-....|.. |++.++++.+ ++.+++- +.. ...|..+
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~---Vi~~~~s~~k------~~~~~~l---------------Ga~-~vi~~~~ 82 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAK---LIGTVGTAQK------AQSALKA---------------GAW-QVINYRE 82 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCE---EEEEESSHHH------HHHHHHH---------------TCS-EEEETTT
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCe---EeecccchHH------HHHHHhc---------------CCe-EEEECCC
Confidence 4578999999999999999999888886 8899887532 2222221 111 2346666
Q ss_pred CCCCCCHHHHHHHhc--cccEEEEccee
Q psy17679 123 PGLGLSETDRATLVK--QVNIVFHGAAT 148 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~--~~dvVi~~a~~ 148 (303)
.++ .+.+.++-. ++|+|+++.+.
T Consensus 83 ~d~---~~~v~~~t~g~g~d~v~d~~g~ 107 (179)
T d1qora2 83 EDL---VERLKEITGGKKVRVVYDSVGR 107 (179)
T ss_dssp SCH---HHHHHHHTTTCCEEEEEECSCG
T ss_pred CCH---HHHHHHHhCCCCeEEEEeCccH
Confidence 551 113333332 68999999874
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.40 E-value=0.0012 Score=51.28 Aligned_cols=40 Identities=20% Similarity=0.370 Sum_probs=29.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.++.||.|.||||+.|..+++.|.+. ..+..+.+.+++..
T Consensus 3 ~~kikVaIlGATGyvG~elirLL~~H-P~~ei~~l~S~~~a 42 (183)
T d2cvoa1 3 GEEVRIAVLGASGYTGAEIVRLLANH-PQFRIKVMTADRKA 42 (183)
T ss_dssp SSCEEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEECSTTT
T ss_pred CCccEEEEECcccHHHHHHHHHHHhC-CCceEEEEeccccC
Confidence 45679999999999999999999876 34443344444433
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.30 E-value=0.0011 Score=51.95 Aligned_cols=37 Identities=19% Similarity=0.332 Sum_probs=32.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
|.-+||.|.|+ |.+|+.++..++..|++ |++.++++.
T Consensus 2 ~~IkkvaViGa-G~mG~~iA~~~a~~G~~---V~l~D~~~~ 38 (192)
T d1f0ya2 2 IIVKHVTVIGG-GLMGAGIAQVAAATGHT---VVLVDQTED 38 (192)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCE---EEEECSCHH
T ss_pred ceeEEEEEECc-CHHHHHHHHHHHhCCCc---EEEEECChH
Confidence 34579999995 99999999999999998 999999764
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.29 E-value=0.0018 Score=49.41 Aligned_cols=38 Identities=18% Similarity=0.262 Sum_probs=33.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcc
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGK 84 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~ 84 (303)
+..|||+||+|.+|...++-....|.. |++++|++.+.
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~---Viat~~s~~k~ 61 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRGYD---VVASTGNREAA 61 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHTCC---EEEEESSSSTH
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCc---eEEEecCHHHH
Confidence 346999999999999999998888988 99999987643
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.27 E-value=0.0023 Score=47.84 Aligned_cols=37 Identities=27% Similarity=0.254 Sum_probs=33.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
+++||.|.||.|.+|+.+++.|.+.||+ |.+.+|...
T Consensus 8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~---V~~~d~~~~ 44 (152)
T d2pv7a2 8 DIHKIVIVGGYGKLGGLFARYLRASGYP---ISILDREDW 44 (152)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCC---EEEECTTCG
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHcCCC---cEecccccc
Confidence 4578999999999999999999999999 999998754
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=96.14 E-value=0.031 Score=41.29 Aligned_cols=76 Identities=7% Similarity=0.150 Sum_probs=53.7
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
-+|+|.|. |-+|..+++.|.+.|++ |+++...+.. ....++.+. ..++.++.||.++++
T Consensus 4 nHiII~G~-g~~g~~l~~~L~~~~~~---v~vId~d~~~--~~~~~~~~~---------------~~~~~vi~Gd~~d~~ 62 (153)
T d1id1a_ 4 DHFIVCGH-SILAINTILQLNQRGQN---VTVISNLPED--DIKQLEQRL---------------GDNADVIPGDSNDSS 62 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCC---EEEEECCCHH--HHHHHHHHH---------------CTTCEEEESCTTSHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCC---EEEEeccchh--HHHHHHHhh---------------cCCcEEEEccCcchH
Confidence 36999985 89999999999999988 7777776431 122222221 157899999999876
Q ss_pred CCCCHHHHHHH-hccccEEEEcce
Q psy17679 125 LGLSETDRATL-VKQVNIVFHGAA 147 (303)
Q Consensus 125 ~~~~~~~~~~~-~~~~dvVi~~a~ 147 (303)
.+.++ +++++.||-+..
T Consensus 63 ------~L~~a~i~~a~~vi~~~~ 80 (153)
T d1id1a_ 63 ------VLKKAGIDRCRAILALSD 80 (153)
T ss_dssp ------HHHHHTTTTCSEEEECSS
T ss_pred ------HHHHhccccCCEEEEccc
Confidence 45544 358888886644
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.08 E-value=0.0095 Score=46.53 Aligned_cols=39 Identities=15% Similarity=0.208 Sum_probs=32.9
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..+.+++|.|.| .|.||+.+++.|...|.+ |++.++..+
T Consensus 39 ~el~gk~vgIiG-~G~IG~~va~~l~~fg~~---V~~~d~~~~ 77 (197)
T d1j4aa1 39 REVRDQVVGVVG-TGHIGQVFMQIMEGFGAK---VITYDIFRN 77 (197)
T ss_dssp CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSCC
T ss_pred ccccCCeEEEec-ccccchhHHHhHhhhccc---ccccCcccc
Confidence 347789999998 899999999999988887 888776543
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.06 E-value=0.048 Score=38.08 Aligned_cols=97 Identities=13% Similarity=0.111 Sum_probs=61.0
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+++++|+|.| .|-+|..-++.|++.|.. |++.+..... .+..+.. ..+++++...+
T Consensus 9 ~l~~k~vlVvG-~G~va~~ka~~ll~~ga~---v~v~~~~~~~-----~~~~~~~--------------~~~i~~~~~~~ 65 (113)
T d1pjqa1 9 QLRDRDCLIVG-GGDVAERKARLLLEAGAR---LTVNALTFIP-----QFTVWAN--------------EGMLTLVEGPF 65 (113)
T ss_dssp CCBTCEEEEEC-CSHHHHHHHHHHHHTTBE---EEEEESSCCH-----HHHHHHT--------------TTSCEEEESSC
T ss_pred EeCCCEEEEEC-CCHHHHHHHHHHHHCCCe---EEEEeccCCh-----HHHHHHh--------------cCCceeeccCC
Confidence 47789999999 589999999999999887 7777665431 2222211 14677777665
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
.+.+ +.+.+.|+.+.+- .+ -...+.+.|++. + .+|++...
T Consensus 66 ~~~d-----------l~~~~lv~~at~d------~~--------~n~~i~~~a~~~-~--ilVNv~D~ 105 (113)
T d1pjqa1 66 DETL-----------LDSCWLAIAATDD------DT--------VNQRVSDAAESR-R--IFCNVVDA 105 (113)
T ss_dssp CGGG-----------GTTCSEEEECCSC------HH--------HHHHHHHHHHHT-T--CEEEETTC
T ss_pred CHHH-----------hCCCcEEeecCCC------HH--------HHHHHHHHHHHc-C--CEEEeCCC
Confidence 5432 3567877755442 11 013566777776 2 35665543
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=96.06 E-value=0.0029 Score=47.66 Aligned_cols=35 Identities=17% Similarity=0.204 Sum_probs=31.7
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG 83 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~ 83 (303)
|||+|.|+ |.+|..++..|.+.|++ |.+++|++..
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~---V~~~~r~~~~ 35 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHE---VQGWLRVPQP 35 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCE---EEEECSSCCS
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCc---eEEEEcCHHH
Confidence 78999996 99999999999999998 9999998653
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.05 E-value=0.011 Score=44.70 Aligned_cols=38 Identities=16% Similarity=0.119 Sum_probs=31.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG 83 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~ 83 (303)
..+.+|+|.|+ |.+|...++.+...|.+ |+++++++.+
T Consensus 26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~---vi~~~~~~~k 63 (168)
T d1piwa2 26 GPGKKVGIVGL-GGIGSMGTLISKAMGAE---TYVISRSSRK 63 (168)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHTCE---EEEEESSSTT
T ss_pred CCCCEEEEECC-CCcchhHHHHhhhcccc---ccccccchhH
Confidence 34678999986 99999998888888886 8889987653
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=95.99 E-value=0.01 Score=40.23 Aligned_cols=37 Identities=19% Similarity=0.303 Sum_probs=31.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.++|+|+|.|. |-.|..+++.|.+.|++ |++.+.+..
T Consensus 3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~---v~~~D~~~~ 39 (93)
T d2jfga1 3 YQGKNVVIIGL-GLTGLSCVDFFLARGVT---PRVMDTRMT 39 (93)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCC---CEEEESSSS
T ss_pred cCCCEEEEEeE-CHHHHHHHHHHHHCCCE---EEEeeCCcC
Confidence 57899999985 88999999999999998 778777654
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=95.99 E-value=0.0042 Score=47.40 Aligned_cols=37 Identities=22% Similarity=0.169 Sum_probs=31.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.++|+|+|.| +|+.+++++..|.+.|.+ |+++.|+.+
T Consensus 16 ~~~k~vlIlG-aGGaarai~~al~~~g~~---i~I~nRt~~ 52 (170)
T d1nyta1 16 RPGLRILLIG-AGGASRGVLLPLLSLDCA---VTITNRTVS 52 (170)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSHH
T ss_pred CCCCEEEEEC-CcHHHHHHHHHhcccceE---EEeccchHH
Confidence 5678999999 599999999999999764 999999743
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=95.86 E-value=0.0047 Score=47.56 Aligned_cols=36 Identities=25% Similarity=0.460 Sum_probs=27.1
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
|+||.|.||||++|..+++.|..+ .++..+.+..++
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~H-P~~ei~~l~~~s 36 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRH-PHMTITALTVSA 36 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTEEEEEEEEET
T ss_pred CcEEEEECcccHHHHHHHHHHHhC-CCCceEeeEeec
Confidence 579999999999999999988876 344333444443
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=95.77 E-value=0.0097 Score=45.33 Aligned_cols=36 Identities=25% Similarity=0.300 Sum_probs=29.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.++++|+|.| +|+.+++++..|.+.+. +|+++.|+.
T Consensus 16 ~~~k~vlIlG-aGGaarai~~aL~~~~~---~i~I~nR~~ 51 (171)
T d1p77a1 16 RPNQHVLILG-AGGATKGVLLPLLQAQQ---NIVLANRTF 51 (171)
T ss_dssp CTTCEEEEEC-CSHHHHTTHHHHHHTTC---EEEEEESSH
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHcccCc---eeeeccchH
Confidence 4678999998 58899999999987543 599999984
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=95.72 E-value=0.023 Score=44.08 Aligned_cols=38 Identities=16% Similarity=0.105 Sum_probs=32.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.+.+++|.|.| .|-||+.+++.|...|.+ |+..++...
T Consensus 46 eL~gktvgIiG-~G~IG~~va~~l~~fg~~---v~~~d~~~~ 83 (193)
T d1mx3a1 46 RIRGETLGIIG-LGRVGQAVALRAKAFGFN---VLFYDPYLS 83 (193)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCE---EEEECTTSC
T ss_pred eeeCceEEEec-cccccccceeeeeccccc---eeeccCccc
Confidence 36789999998 799999999999988887 888887654
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=95.71 E-value=0.01 Score=45.26 Aligned_cols=33 Identities=18% Similarity=0.047 Sum_probs=30.2
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|||.|.|+ |-+|..++..|.+.|++ |.+++|++
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G~~---V~~~~r~~ 34 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKGQS---VLAWDIDA 34 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCE---EEEEECCH
Confidence 78999995 99999999999999998 99999964
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=95.63 E-value=0.015 Score=40.82 Aligned_cols=67 Identities=13% Similarity=0.122 Sum_probs=50.2
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
.+||.|.| .|.+|+-++....+.|++ +++++.+++.... .---.++.+|+.|.
T Consensus 11 ~~kigIlG-gGQL~rMla~aA~~lG~~---v~v~d~~~~~PA~-----------------------~va~~~i~~~~~d~ 63 (111)
T d1kjqa2 11 ATRVMLLG-SGELGKEVAIECQRLGVE---VIAVDRYADAPAM-----------------------HVAHRSHVINMLDG 63 (111)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHTTTCE---EEEEESSTTCGGG-----------------------GGSSEEEECCTTCH
T ss_pred CCEEEEEe-CCHHHHHHHHHHHHCCCE---EEEEcCCCCCchh-----------------------hcCCeEEECCCCCH
Confidence 35899999 699999999999999998 8888887642210 01235788999987
Q ss_pred CCCCCHHHHHHHhc--cccEEE
Q psy17679 124 GLGLSETDRATLVK--QVNIVF 143 (303)
Q Consensus 124 ~~~~~~~~~~~~~~--~~dvVi 143 (303)
+ .+.++.. ++|+|.
T Consensus 64 ~------~l~~~~~~~~~DviT 79 (111)
T d1kjqa2 64 D------ALRRVVELEKPHYIV 79 (111)
T ss_dssp H------HHHHHHHHHCCSEEE
T ss_pred H------HHHHHHHhhCCceEE
Confidence 6 6666654 579886
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=95.51 E-value=0.025 Score=42.72 Aligned_cols=37 Identities=24% Similarity=0.372 Sum_probs=30.8
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
++++|+|.| +|+.|++++..|.+.|.. +|+++.|+.+
T Consensus 16 ~~~~vlIlG-aGGaarai~~aL~~~g~~--~I~I~nR~~~ 52 (167)
T d1npya1 16 KNAKVIVHG-SGGMAKAVVAAFKNSGFE--KLKIYARNVK 52 (167)
T ss_dssp TTSCEEEEC-SSTTHHHHHHHHHHTTCC--CEEEECSCHH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCC--EEEEecccHH
Confidence 457899998 599999999999999763 4889999743
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.50 E-value=0.077 Score=41.10 Aligned_cols=33 Identities=15% Similarity=0.157 Sum_probs=29.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|||.|.| .|++|..++..|.+.|++ |++++.++
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~~---V~g~D~n~ 33 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGHE---VIGVDVSS 33 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCCc---EEEEeCCH
Confidence 6799997 899999999999999998 88988763
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=95.25 E-value=0.032 Score=41.96 Aligned_cols=37 Identities=19% Similarity=0.177 Sum_probs=30.5
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+.+|+|+|++|.+|...+..+...|.. .|++.++++
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~--~V~~~~~~~ 63 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGA--TIIGVDVRE 63 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCC--EEEEEESSH
T ss_pred CCCEEEEEeccccceeeeeecccccccc--cccccccch
Confidence 4568999999999999999988888753 388888764
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=95.24 E-value=0.046 Score=41.21 Aligned_cols=38 Identities=16% Similarity=0.402 Sum_probs=28.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|++.||.|.| +|.+|+.++..|.+. .++.-|-+.+|+.
T Consensus 1 M~kirvgiiG-~G~ig~~~~~~l~~~-~~~elvav~~~~~ 38 (170)
T d1f06a1 1 MTNIRVAIVG-YGNLGRSVEKLIAKQ-PDMDLVGIFSRRA 38 (170)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHTTC-SSEEEEEEEESSS
T ss_pred CCcceEEEEC-ChHHHHHHHHHHHhC-CCcEEEEEEeccc
Confidence 5667899998 799999999999875 3444455566654
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.18 E-value=0.034 Score=42.86 Aligned_cols=37 Identities=16% Similarity=0.100 Sum_probs=31.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
...+++|.|.| .|.||..+++.|...|.+ |+..++..
T Consensus 41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~---v~~~d~~~ 77 (188)
T d1sc6a1 41 EARGKKLGIIG-YGHIGTQLGILAESLGMY---VYFYDIEN 77 (188)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSC
T ss_pred cccceEEEEee-cccchhhhhhhcccccce---Eeeccccc
Confidence 36778999997 899999999999988887 88887754
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=95.13 E-value=0.016 Score=43.71 Aligned_cols=36 Identities=17% Similarity=0.205 Sum_probs=29.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.+.+|+|+| +|.+|...+..+...|.. |+++++++.
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~---vi~v~~~~~ 61 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAF---VVCTARSPR 61 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEEESCHH
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhccc---ccccchHHH
Confidence 456899997 799999999888888865 889888743
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.12 E-value=0.011 Score=44.41 Aligned_cols=34 Identities=24% Similarity=0.322 Sum_probs=30.2
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|++|.+.| .|.+|+.+++.|++.||+ |++.+|++
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~g~~---v~~~d~~~ 34 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKAGYL---LNVFDLVQ 34 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCE---EEEECSSH
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHCCCe---EEEEECch
Confidence 46799997 899999999999999998 88888874
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=95.11 E-value=0.028 Score=42.05 Aligned_cols=34 Identities=24% Similarity=0.365 Sum_probs=30.2
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
|||-|.| .|.+|+.+++.|++.|++ |++.+|+++
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~G~~---V~~~d~~~~ 34 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKAGYS---LVVSDRNPE 34 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCE---EEEECSCHH
T ss_pred CEEEEEe-hhHHHHHHHHHHHHCCCe---EEEEeCCcc
Confidence 5799997 799999999999999998 889998743
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=95.10 E-value=0.013 Score=44.87 Aligned_cols=38 Identities=16% Similarity=0.250 Sum_probs=30.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..+.+|+|+|+ |.+|...+..+...|.. .|+++++++.
T Consensus 27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~--~Vi~~~~~~~ 64 (182)
T d1vj0a2 27 FAGKTVVIQGA-GPLGLFGVVIARSLGAE--NVIVIAGSPN 64 (182)
T ss_dssp CBTCEEEEECC-SHHHHHHHHHHHHTTBS--EEEEEESCHH
T ss_pred CCCCEEEEECC-Cccchhheecccccccc--cccccccccc
Confidence 34679999996 99999999999888863 4888888643
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.09 E-value=0.013 Score=45.26 Aligned_cols=34 Identities=12% Similarity=0.043 Sum_probs=27.3
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
.+|||+||+|.+|...++-....|..+ |+..+++
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga~~--vi~~~~~ 65 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGCSR--VVGICGT 65 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTCSE--EEEEESS
T ss_pred CEEEEECCCchhhHHHHHHHHHcCCcc--eecccch
Confidence 579999999999999999988888762 5444554
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.07 E-value=0.0098 Score=44.49 Aligned_cols=35 Identities=26% Similarity=0.374 Sum_probs=26.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
=||.|.||||++|..+++.|.+..+.+..+..++.
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s 36 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLAS 36 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecc
Confidence 37999999999999999888666445555665554
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=95.02 E-value=0.031 Score=41.34 Aligned_cols=34 Identities=12% Similarity=0.149 Sum_probs=29.2
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
|||.|.| .|.+|+.+++.|++.|++ |+...|.++
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~g~~---v~~~~~~~~ 34 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSRGVE---VVTSLEGRS 34 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCE---EEECCTTCC
T ss_pred CEEEEEc-HHHHHHHHHHHHHHCCCe---EEEEcCchh
Confidence 5789997 799999999999999987 777777654
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=95.01 E-value=0.071 Score=35.61 Aligned_cols=69 Identities=13% Similarity=0.125 Sum_probs=46.0
Q ss_pred cEEEEeCCcchhH-HHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCC
Q psy17679 45 KTIFLTGGTGFMG-KTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLP 123 (303)
Q Consensus 45 ~~vlItGatG~iG-~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 123 (303)
|||.+.| -|++| +.|++-|.+.|+. |.+.++..+. ..++|++ .++.+..+.-.
T Consensus 2 ~~ihfiG-IgG~GMs~LA~~L~~~G~~---VsGSD~~~~~--~t~~L~~------------------~Gi~i~~gh~~-- 55 (89)
T d1j6ua1 2 MKIHFVG-IGGIGMSAVALHEFSNGND---VYGSNIEETE--RTAYLRK------------------LGIPIFVPHSA-- 55 (89)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCE---EEEECSSCCH--HHHHHHH------------------TTCCEESSCCT--
T ss_pred cEEEEEe-ECHHHHHHHHHHHHhCCCe---EEEEeCCCCh--hHHHHHH------------------CCCeEEeeecc--
Confidence 6788887 45566 6889999999998 9999987542 2223322 46666554311
Q ss_pred CCCCCHHHHHHHhccccEEEEcceec
Q psy17679 124 GLGLSETDRATLVKQVNIVFHGAATV 149 (303)
Q Consensus 124 ~~~~~~~~~~~~~~~~dvVi~~a~~~ 149 (303)
+ . +.+.|.||...+..
T Consensus 56 ~------~----i~~~d~vV~SsAI~ 71 (89)
T d1j6ua1 56 D------N----WYDPDLVIKTPAVR 71 (89)
T ss_dssp T------S----CCCCSEEEECTTCC
T ss_pred c------c----cCCCCEEEEecCcC
Confidence 1 1 25689999988874
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=95.01 E-value=0.055 Score=41.56 Aligned_cols=38 Identities=16% Similarity=0.104 Sum_probs=32.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.+.+++|.|.| .|-||..+++.|...|.+ |...+|...
T Consensus 41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~---v~~~d~~~~ 78 (188)
T d2naca1 41 DLEAMHVGTVA-AGRIGLAVLRRLAPFDVH---LHYTDRHRL 78 (188)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHGGGTCE---EEEECSSCC
T ss_pred eccccceeecc-ccccchhhhhhhhccCce---EEEEeeccc
Confidence 46779999998 799999999999988877 888888654
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=94.93 E-value=0.015 Score=45.06 Aligned_cols=37 Identities=14% Similarity=0.285 Sum_probs=31.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+.++||.|.| +|-.|.+++..|.+.|++ |.+..|++
T Consensus 4 ~~~m~KI~ViG-aG~wGtAlA~~La~~g~~---V~l~~r~~ 40 (189)
T d1n1ea2 4 LLYLNKAVVFG-SGAFGTALAMVLSKKCRE---VCVWHMNE 40 (189)
T ss_dssp CCCEEEEEEEC-CSHHHHHHHHHHHTTEEE---EEEECSCH
T ss_pred cceeceEEEEC-CCHHHHHHHHHHHHcCCe---EEEEEecH
Confidence 35567899998 699999999999999887 88988863
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=94.88 E-value=0.063 Score=36.40 Aligned_cols=71 Identities=17% Similarity=0.159 Sum_probs=47.6
Q ss_pred CCcEEEEeCCcchhH-HHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 43 RDKTIFLTGGTGFMG-KTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 43 ~~~~vlItGatG~iG-~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
..++|.+.| .|++| ++||+-|.++|++ |.+.++..+. .. +.+.+ .++.+..++-.
T Consensus 7 ~~~~ihfiG-igG~GMs~LA~~L~~~G~~---VsGSD~~~~~--~~---~~L~~---------------~Gi~v~~g~~~ 62 (96)
T d1p3da1 7 RVQQIHFIG-IGGAGMSGIAEILLNEGYQ---ISGSDIADGV--VT---QRLAQ---------------AGAKIYIGHAE 62 (96)
T ss_dssp TCCEEEEET-TTSTTHHHHHHHHHHHTCE---EEEEESCCSH--HH---HHHHH---------------TTCEEEESCCG
T ss_pred hCCEEEEEE-ECHHHHHHHHHHHHhCCCE---EEEEeCCCCh--hh---hHHHH---------------CCCeEEECCcc
Confidence 457899987 45566 8889999999998 9999887542 12 22222 46666665422
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceec
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATV 149 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~ 149 (303)
+ .+.+.|.||...+..
T Consensus 63 ~------------~i~~~d~vV~S~AI~ 78 (96)
T d1p3da1 63 E------------HIEGASVVVVSSAIK 78 (96)
T ss_dssp G------------GGTTCSEEEECTTSC
T ss_pred c------------cCCCCCEEEECCCcC
Confidence 1 235779999888764
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=94.85 E-value=0.022 Score=42.86 Aligned_cols=36 Identities=14% Similarity=0.159 Sum_probs=28.9
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.+.+|+|.|+ |.+|...++.+...|.. ++++++++.
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~---~i~~~~~~~ 65 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAH---VVAFTTSEA 65 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESSGG
T ss_pred CCCEEEEecc-chHHHHHHHHhhccccc---chhhccchh
Confidence 4578999985 89999999888888876 667777654
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=94.83 E-value=0.017 Score=44.16 Aligned_cols=36 Identities=22% Similarity=0.262 Sum_probs=32.1
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG 83 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~ 83 (303)
.+|||+||+|.+|...++-....|.+ |++++|++.+
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~Ga~---Via~~~~~~k 68 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKLGYQ---VVAVSGREST 68 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCC---EEEEESCGGG
T ss_pred CcEEEEEccccchHHHHHHHHHcCCC---eEEEecchhH
Confidence 47999999999999999999999998 8899997654
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=94.81 E-value=0.028 Score=43.83 Aligned_cols=38 Identities=13% Similarity=0.133 Sum_probs=32.4
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.+.+++|.|.| .|-||+.+++.|...|.+ |++.++...
T Consensus 42 ~l~~ktvgIiG-~G~IG~~va~~l~~fg~~---v~~~d~~~~ 79 (199)
T d1dxya1 42 ELGQQTVGVMG-TGHIGQVAIKLFKGFGAK---VIAYDPYPM 79 (199)
T ss_dssp CGGGSEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSCC
T ss_pred cccceeeeeee-ccccccccccccccccee---eeccCCccc
Confidence 46679999998 799999999999998887 888887543
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=94.71 E-value=0.027 Score=43.34 Aligned_cols=35 Identities=17% Similarity=0.164 Sum_probs=30.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
-++|.|.|+ |.+|+.++..++..|++ |++.++++.
T Consensus 4 I~~vaViGa-G~mG~~iA~~~a~~G~~---V~l~D~~~~ 38 (186)
T d1wdka3 4 VKQAAVLGA-GIMGGGIAYQSASKGTP---ILMKDINEH 38 (186)
T ss_dssp CSSEEEECC-HHHHHHHHHHHHHTTCC---EEEECSSHH
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCe---EEEEECCHH
Confidence 367999996 99999999999999998 999999753
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=94.70 E-value=0.024 Score=43.52 Aligned_cols=38 Identities=18% Similarity=0.235 Sum_probs=33.0
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.+.+++|.|.| .|-||+.+++.|...|.+ |++.+|...
T Consensus 39 ~l~gk~vgIiG-~G~IG~~va~~l~~~g~~---v~~~d~~~~ 76 (181)
T d1qp8a1 39 LIQGEKVAVLG-LGEIGTRVGKILAALGAQ---VRGFSRTPK 76 (181)
T ss_dssp CCTTCEEEEES-CSTHHHHHHHHHHHTTCE---EEEECSSCC
T ss_pred cccCceEEEec-cccccccceeeeeccccc---ccccccccc
Confidence 47789999998 799999999999999887 888888653
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=94.67 E-value=0.033 Score=41.91 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=30.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++|+|+|.|.+..+|+.++..|.++|.. |+.+.+
T Consensus 34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gat---Vt~~h~ 69 (166)
T d1b0aa1 34 DTFGLNAVVIGASNIVGRPMSMELLLAGCT---TTVTHR 69 (166)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTCE---EEEECS
T ss_pred ccccceEEEEeccccccHHHHHHHHHhhcc---cccccc
Confidence 468899999999999999999999998876 665544
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=94.53 E-value=0.056 Score=40.84 Aligned_cols=37 Identities=11% Similarity=0.013 Sum_probs=28.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+.+|+|.|+ |.+|...+..+...|.. .|++.++++
T Consensus 27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~--~v~~~~~~~ 63 (174)
T d1f8fa2 27 TPASSFVTWGA-GAVGLSALLAAKVCGAS--IIIAVDIVE 63 (174)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHHTCS--EEEEEESCH
T ss_pred CCCCEEEEeCC-CHHHhhhhhcccccccc--eeeeeccHH
Confidence 45678999986 99999999988888876 366666653
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.44 E-value=0.054 Score=40.89 Aligned_cols=37 Identities=11% Similarity=0.135 Sum_probs=31.4
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
.+++|+|+|.|.+.-+|+.++..|.++|.. |+.+.+.
T Consensus 36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gat---Vt~~~~~ 72 (170)
T d1a4ia1 36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNAT---VTTCHSK 72 (170)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCE---EEEECTT
T ss_pred ccccceEEEEecCCccchHHHHHHHhccCc---eEEEecc
Confidence 478899999999999999999999999876 6555543
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=94.43 E-value=0.048 Score=43.71 Aligned_cols=39 Identities=23% Similarity=0.289 Sum_probs=31.5
Q ss_pred ccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 39 QEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 39 ~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
++.++.++|+|.| .|.+|++++..|...|-. ++++++.+
T Consensus 25 Q~kL~~~~VliiG-~GglGs~va~~La~~Gvg--~i~lvD~D 63 (247)
T d1jw9b_ 25 QEALKDSRVLIVG-LGGLGCAASQYLASAGVG--NLTLLDFD 63 (247)
T ss_dssp HHHHHHCEEEEEC-CSHHHHHHHHHHHHHTCS--EEEEECCC
T ss_pred HHHHhCCCEEEEC-CCHHHHHHHHHHHHcCCC--eEEEECCc
Confidence 3456778999999 689999999999999754 57777654
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=94.40 E-value=0.018 Score=43.18 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=29.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|||.|.| .|.+|..+++.|.+.|++ |++.+|++
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~g~~---V~~~d~~~ 33 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRRGHY---LIGVSRQQ 33 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCE---EEEEECCc
Confidence 6799997 699999999999999997 88999874
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.38 E-value=0.082 Score=40.41 Aligned_cols=38 Identities=16% Similarity=0.092 Sum_probs=32.0
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.+.++++.|.| .|.||+.+++.+...|.. |+..++..+
T Consensus 41 ~l~~k~vgiiG-~G~IG~~va~~~~~fg~~---v~~~d~~~~ 78 (184)
T d1ygya1 41 EIFGKTVGVVG-LGRIGQLVAQRIAAFGAY---VVAYDPYVS 78 (184)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCE---EEEECTTSC
T ss_pred cccceeeeecc-ccchhHHHHHHhhhccce---EEeecCCCC
Confidence 46789999998 799999999999888876 888887654
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.35 E-value=0.038 Score=42.15 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=29.6
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
|||.|.| +|-.|.+++..|.+.|++ |++..|..+
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~g~~---V~l~~r~~~ 34 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDNGNE---VRIWGTEFD 34 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHCCE---EEEECCGGG
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCE---EEEEEeccc
Confidence 6899998 599999999999999987 888888543
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.35 E-value=0.039 Score=48.21 Aligned_cols=96 Identities=16% Similarity=0.126 Sum_probs=55.1
Q ss_pred ccccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc---cc-----HHHHHHHHHHhHHHhhhhccCcCcC
Q psy17679 39 QEFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG---KD-----IQERLDAIFEDRLFWRLRAEVPDFR 110 (303)
Q Consensus 39 ~~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~---~~-----~~~~l~~l~~~~~~~~~~~~~~~~~ 110 (303)
+..++.+||||.|+ |.+|..+++.|...|.. .|++++...=. .. ..+.+-+.+...+..++..-+| .
T Consensus 32 ~~~l~~~kVlvvG~-GglG~ei~k~L~~~Gvg--~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np--~ 106 (426)
T d1yovb1 32 QFLLDTCKVLVIGA-GGLGCELLKNLALSGFR--QIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP--N 106 (426)
T ss_dssp HHHHHHCCEEEECS-STTHHHHHHHHHTTTCC--CEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHST--T
T ss_pred HHHHhcCeEEEECC-CHHHHHHHHHHHHcCCC--eEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCC--C
Confidence 34466789999995 78999999999999863 47777664310 00 0000000000011112222222 1
Q ss_pred CceEEEEecCCCCCCCCCHHHHHHHhccccEEEEcce
Q psy17679 111 SKVSAVAGDCSLPGLGLSETDRATLVKQVNIVFHGAA 147 (303)
Q Consensus 111 ~~v~~~~~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~ 147 (303)
.++..+..++.+.. ...+++.|+||.+..
T Consensus 107 v~i~~~~~~i~~~~--------~~~~~~~DlVi~~~D 135 (426)
T d1yovb1 107 CNVVPHFNKIQDFN--------DTFYRQFHIIVCGLD 135 (426)
T ss_dssp CCCEEECSCGGGBC--------HHHHTTCSEEEECCS
T ss_pred CceEeeeccccchH--------HHHHHhcchheeccC
Confidence 46667777776643 357789999997754
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=94.35 E-value=0.022 Score=42.87 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=28.1
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+||.|.|++|-.|+.+++.+.+.. .+.-+.+++|..
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~~-~~~lv~~~~~~~ 40 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALALE-GVQLGAALEREG 40 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHST-TEECCCEECCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEeccc
Confidence 4689999999999999999998872 333355566654
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=94.33 E-value=0.048 Score=40.34 Aligned_cols=33 Identities=15% Similarity=0.205 Sum_probs=28.7
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|||.+.| +|-+|++++..|++.|++ |++..|+.
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~~~~---i~v~~r~~ 33 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQTPHE---LIISGSSL 33 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTSSCE---EEEECSSH
T ss_pred CEEEEEe-ccHHHHHHHHHHHhCCCe---EEEEcChH
Confidence 6788997 899999999999999887 88888864
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=94.26 E-value=0.13 Score=39.44 Aligned_cols=38 Identities=16% Similarity=0.155 Sum_probs=32.0
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.+.++++.|.| .|.||+.+++.|...|.+ |...++...
T Consensus 44 ~l~g~tvgIiG-~G~IG~~va~~l~~fg~~---v~~~d~~~~ 81 (191)
T d1gdha1 44 KLDNKTLGIYG-FGSIGQALAKRAQGFDMD---IDYFDTHRA 81 (191)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCE---EEEECSSCC
T ss_pred eecccceEEee-cccchHHHHHHHHhhccc---ccccccccc
Confidence 46789999998 799999999999988887 777777543
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=94.14 E-value=0.098 Score=39.35 Aligned_cols=39 Identities=18% Similarity=0.047 Sum_probs=30.6
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG 83 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~ 83 (303)
-.+.+|+|.|+ |.+|...+..+...|.. .|++.++++.+
T Consensus 27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~--~Vi~~~~~~~k 65 (176)
T d2jhfa2 27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAA--RIIGVDINKDK 65 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCS--EEEEECSCGGG
T ss_pred CCCCEEEEECC-CCcHHHHHHHHHHcCCc--eEEeecCcHHH
Confidence 34578999998 67999999999888764 48888887653
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=94.12 E-value=0.033 Score=41.81 Aligned_cols=36 Identities=28% Similarity=0.373 Sum_probs=30.2
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
||+|+|.| .|.+|..+++.|.+.|+.+ +|++.+|++
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~-~I~~~D~~~ 36 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKG-KIYGYDINP 36 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCS-EEEEECSCH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCe-EEEEEECCh
Confidence 46799998 6999999999999998753 488888863
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=94.06 E-value=0.11 Score=37.04 Aligned_cols=69 Identities=14% Similarity=0.218 Sum_probs=47.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSLPG 124 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 124 (303)
|+|+|.| .|-+|..+++.|.. ++ |.++..++.... .+.. .++.++.||.++++
T Consensus 1 kHivI~G-~g~~g~~l~~~L~~--~~---i~vi~~d~~~~~------~~~~---------------~~~~~i~Gd~~~~~ 53 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLRELRG--SE---VFVLAEDENVRK------KVLR---------------SGANFVHGDPTRVS 53 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTSCG--GG---EEEEESCTTHHH------HHHH---------------TTCEEEESCTTSHH
T ss_pred CEEEEEC-CCHHHHHHHHHHcC--CC---CEEEEcchHHHH------HHHh---------------cCccccccccCCHH
Confidence 5689998 58899999999953 45 667777654321 1111 57889999999876
Q ss_pred CCCCHHHHHHH-hccccEEEEcc
Q psy17679 125 LGLSETDRATL-VKQVNIVFHGA 146 (303)
Q Consensus 125 ~~~~~~~~~~~-~~~~dvVi~~a 146 (303)
.+.++ +++++.+|-+.
T Consensus 54 ------~L~~a~i~~A~~vi~~~ 70 (129)
T d2fy8a1 54 ------DLEKANVRGARAVIVNL 70 (129)
T ss_dssp ------HHHHTTCTTCSEEEECC
T ss_pred ------HHHHhhhhcCcEEEEec
Confidence 45543 34788888543
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=94.00 E-value=0.11 Score=36.45 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=31.1
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..++++|.| .|++|-.++..|.+.|.+ |+++.|...
T Consensus 21 ~p~~i~IiG-~G~ig~E~A~~l~~~G~~---Vtiv~~~~~ 56 (119)
T d3lada2 21 VPGKLGVIG-AGVIGLELGSVWARLGAE---VTVLEAMDK 56 (119)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCE---EEEEESSSS
T ss_pred CCCeEEEEC-CChHHHHHHHHHHHcCCc---eEEEEeecc
Confidence 347899998 599999999999999998 888888754
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=93.87 E-value=0.11 Score=38.87 Aligned_cols=38 Identities=16% Similarity=-0.007 Sum_probs=28.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..+.+|+|.|+ |.+|...+..+...|.. .|++.++++.
T Consensus 27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~--~vi~~~~~~~ 64 (176)
T d2fzwa2 27 EPGSVCAVFGL-GGVGLAVIMGCKVAGAS--RIIGVDINKD 64 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCS--EEEEECSCGG
T ss_pred CCCCEEEEecc-hhHHHHHHHHHHHHhcC--ceEEEcccHH
Confidence 34578999997 67899999999888875 3666666544
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=93.85 E-value=0.34 Score=36.29 Aligned_cols=84 Identities=12% Similarity=0.061 Sum_probs=46.0
Q ss_pred CcEEEEeCCcchhHHHH--HHHHHhc-CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 44 DKTIFLTGGTGFMGKTV--VEKLLRS-CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l--~~~Ll~~-g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.|||.|.|| |.+|.++ +..|+.. +....+|..+++++...... .....+.. .. ......+...+
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~---~~~~~~~~----~~----~~~~~~i~~~t- 68 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAI---LTIAKKYV----EE----VGADLKFEKTM- 68 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHH---HHHHHHHH----HH----TTCCCEEEEES-
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHH---HHHHHHHH----Hh----cCCCeEEEEeC-
Confidence 478999996 8888653 3344432 22223588999875422211 11111110 00 01233333332
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceecc
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVR 150 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~ 150 (303)
+...+++++|+|+.+++...
T Consensus 69 ----------d~~eaL~dad~Vv~~~~~g~ 88 (171)
T d1obba1 69 ----------NLDDVIIDADFVINTAMVGG 88 (171)
T ss_dssp ----------CHHHHHTTCSEEEECCCTTH
T ss_pred ----------ChhhcccCCCeEeeeccccc
Confidence 36788899999999988654
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.78 E-value=0.082 Score=39.63 Aligned_cols=37 Identities=8% Similarity=0.082 Sum_probs=29.7
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+.+|+|.|+ |.+|...+..+...|.. +|++.++++
T Consensus 25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~~--~Vi~~d~~~ 61 (171)
T d1pl8a2 25 TLGHKVLVCGA-GPIGMVTLLVAKAMGAA--QVVVTDLSA 61 (171)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCS--EEEEEESCH
T ss_pred CCCCEEEEECC-CccHHHHHHHHHHcCCc--eEEeccCCH
Confidence 34568999986 99999999888888874 488888864
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.72 E-value=0.11 Score=36.79 Aligned_cols=34 Identities=12% Similarity=0.182 Sum_probs=29.2
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.++++|.| .|++|..++..|.+.|.+ |+++.|+.
T Consensus 20 P~~vvIIG-gG~iG~E~A~~l~~lG~~---Vtii~~~~ 53 (122)
T d1h6va2 20 PGKTLVVG-ASYVALECAGFLAGIGLD---VTVMVRSI 53 (122)
T ss_dssp CCSEEEEC-CSHHHHHHHHHHHHTTCC---EEEEESSS
T ss_pred CCeEEEEC-CCccHHHHHHHHhhcCCe---EEEEEech
Confidence 36799998 599999999999999998 77777764
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.71 E-value=0.13 Score=35.80 Aligned_cols=35 Identities=14% Similarity=0.294 Sum_probs=30.7
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.++++|.| .|++|..++..|.+.|.+ |+++.|.+.
T Consensus 22 p~~v~IiG-gG~ig~E~A~~l~~~G~~---Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIG-GGYIGIELGTAYANFGTK---VTILEGAGE 56 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCE---EEEEESSSS
T ss_pred CCeEEEEC-CCccceeeeeeecccccE---EEEEEecce
Confidence 47899998 599999999999999988 888888764
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=93.58 E-value=0.12 Score=36.26 Aligned_cols=35 Identities=20% Similarity=0.450 Sum_probs=30.6
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.++|+|.| .|++|-.++..|.+.|.+ |+++.|.+.
T Consensus 22 p~~v~IiG-gG~iG~E~A~~l~~~g~~---Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVG-SGYIAVELINVIKRLGID---SYIFARGNR 56 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHTTTCE---EEEECSSSS
T ss_pred CCEEEEEC-CchHHHHHHHHHHhcccc---ceeeehhcc
Confidence 47899998 599999999999999987 889998653
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=93.36 E-value=0.061 Score=39.73 Aligned_cols=39 Identities=18% Similarity=0.362 Sum_probs=29.5
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
++|+|.|.|+||.||....+-+.+. .+-.+|.+++-...
T Consensus 1 ~pK~I~IlGsTGSIG~~tL~Vi~~~-~d~f~v~~lsa~~N 39 (150)
T d1r0ka2 1 QPRTVTVLGATGSIGHSTLDLIERN-LDRYQVIALTANRN 39 (150)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHT-GGGEEEEEEEESSC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcC-CCCcEEEEEEeCCC
Confidence 4689999999999999988888765 23345777766544
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=93.35 E-value=0.081 Score=39.05 Aligned_cols=38 Identities=24% Similarity=0.358 Sum_probs=29.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
||+|.|.|+||.||...++-+.+. .+-.+|.+++-+.+
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~-~d~f~v~~Lsa~~N 38 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHN-PEHFRVVALVAGKN 38 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTTEEEEEEEESSC
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhC-CCCcEEEEEEecCc
Confidence 578999999999999988888776 33345777776554
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=93.31 E-value=0.13 Score=38.67 Aligned_cols=36 Identities=11% Similarity=0.026 Sum_probs=28.5
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+.+|+|.|+ |.+|...+..+...|.. +|+++++++
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~--~Vi~~d~~~ 62 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAG--RIIGVGSRP 62 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCS--CEEEECCCH
T ss_pred CCCEEEEEcC-Ccchhhhhhhhhccccc--ccccccchh
Confidence 4567999985 99999998888888764 388888764
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.98 E-value=0.16 Score=35.87 Aligned_cols=35 Identities=17% Similarity=0.296 Sum_probs=30.7
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.++++|.| .|++|-.++..|.+.|.+ |+++.|++.
T Consensus 22 pk~vvIvG-gG~iG~E~A~~l~~~G~~---Vtlv~~~~~ 56 (125)
T d3grsa2 22 PGRSVIVG-AGYIAVEMAGILSALGSK---TSLMIRHDK 56 (125)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSSS
T ss_pred CCEEEEEc-CCccHHHHHHHHhcCCcE---EEEEeeccc
Confidence 37899998 599999999999999987 899999753
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=92.93 E-value=0.032 Score=42.38 Aligned_cols=33 Identities=15% Similarity=0.237 Sum_probs=29.7
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|||-|.| .|..|..+++.|++.|++ |++.+|++
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~G~~---V~~~dr~~ 34 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEKGFK---VAVFNRTY 34 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCC---EEEECSSH
T ss_pred CEEEEEe-ehHHHHHHHHHHHHCCCe---EEEEECCH
Confidence 5788887 899999999999999998 88999864
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=92.88 E-value=0.12 Score=36.50 Aligned_cols=35 Identities=23% Similarity=0.400 Sum_probs=30.4
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.++++|.| .|++|-.++..|.+.|.+ |+++.|.+.
T Consensus 32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~---Vtlv~~~~~ 66 (122)
T d1xhca2 32 SGEAIIIG-GGFIGLELAGNLAEAGYH---VKLIHRGAM 66 (122)
T ss_dssp HSEEEEEE-CSHHHHHHHHHHHHTTCE---EEEECSSSC
T ss_pred CCcEEEEC-CcHHHHHHHHHhhcccce---EEEEecccc
Confidence 37899998 599999999999999987 888888764
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=92.85 E-value=0.072 Score=37.71 Aligned_cols=35 Identities=14% Similarity=0.344 Sum_probs=30.7
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.++++|.| .|++|..++..|.+.|.+ |+++.|++.
T Consensus 30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~---Vtli~~~~~ 64 (121)
T d1d7ya2 30 QSRLLIVG-GGVIGLELAATARTAGVH---VSLVETQPR 64 (121)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEEESSSS
T ss_pred CCeEEEEC-cchhHHHHHHHhhcccce---EEEEeeccc
Confidence 57899998 599999999999999887 888888764
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=92.71 E-value=0.24 Score=37.23 Aligned_cols=38 Identities=13% Similarity=0.062 Sum_probs=30.4
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..+.+|+|+| +|.+|...+..+...|.. .|++.++++.
T Consensus 27 ~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~--~Vi~~d~~~~ 64 (174)
T d1e3ia2 27 TPGSTCAVFG-LGCVGLSAIIGCKIAGAS--RIIAIDINGE 64 (174)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCS--EEEEECSCGG
T ss_pred CCCCEEEEEC-CChHHHHHHHHHHHhCCc--eeeeeccchH
Confidence 3457899997 599999999999998875 3777777654
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.39 E-value=0.053 Score=39.89 Aligned_cols=35 Identities=34% Similarity=0.474 Sum_probs=30.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++|+|||+|| |.+|..-++.|++.|.+ |++++-
T Consensus 10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~---VtVvap 44 (150)
T d1kyqa1 10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCK---LTLVSP 44 (150)
T ss_dssp CCTTCEEEEEEE-SHHHHHHHHHHGGGTCE---EEEEEE
T ss_pred eeCCCEEEEECC-CHHHHHHHHHHHHCCCE---EEEEeC
Confidence 378899999996 99999999999999987 666653
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=92.37 E-value=0.088 Score=40.23 Aligned_cols=37 Identities=22% Similarity=0.231 Sum_probs=29.6
Q ss_pred CcEEEE-eCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc
Q psy17679 44 DKTIFL-TGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG 83 (303)
Q Consensus 44 ~~~vlI-tGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~ 83 (303)
+.+|+| +||+|.+|...++-....|.. |++++|+++.
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~---vI~~v~~~~~ 66 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGKLLNFN---SISVIRDRPN 66 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHHTCE---EEEEECCCTT
T ss_pred CCEEEEEeCCCchHHHHHHHHHhhcCCe---EEEEEecccc
Confidence 345666 699999999999998888887 8888887653
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=92.24 E-value=0.096 Score=37.06 Aligned_cols=35 Identities=11% Similarity=0.331 Sum_probs=30.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
+.++|+|.| .|++|..++..|.+.|.+ |+++.|.+
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~---Vtlie~~~ 63 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFAKAGKK---VTVIDILD 63 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEEESSS
T ss_pred CCCEEEEEC-ChHHHHHHHHHhhccceE---EEEEEecC
Confidence 457899998 599999999999999987 88888865
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=92.18 E-value=0.13 Score=37.76 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=28.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|||.+.| +|-+|.++++.|++.|. ..|++.+|++
T Consensus 1 MkI~fIG-~G~MG~ai~~~l~~~~~--~~i~v~~r~~ 34 (152)
T d1yqga2 1 MNVYFLG-GGNMAAAVAGGLVKQGG--YRIYIANRGA 34 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCS--CEEEEECSSH
T ss_pred CEEEEEc-CcHHHHHHHHHHHHCCC--CcEEEEeCCh
Confidence 6789998 59999999999999973 2499998874
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=92.16 E-value=0.26 Score=35.13 Aligned_cols=93 Identities=17% Similarity=0.281 Sum_probs=58.4
Q ss_pred ccCCcEEEEeCCc---chhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEE
Q psy17679 41 FYRDKTIFLTGGT---GFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVA 117 (303)
Q Consensus 41 ~~~~~~vlItGat---G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~ 117 (303)
....++|.|.|+| +..|..+++.|++.| . ..|+.+..+.. -+.
T Consensus 5 lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~-~-g~v~pVnP~~~--------------------------------~i~ 50 (129)
T d2csua1 5 FFNPKGIAVIGASNDPKKLGYEVFKNLKEYK-K-GKVYPVNIKEE--------------------------------EVQ 50 (129)
T ss_dssp TTSCSEEEEETCCSCTTSHHHHHHHHHTTCC-S-SEEEEECSSCS--------------------------------EET
T ss_pred hCCCCeEEEEccCCCCCCcHHHHHHHHHHcC-C-CcEEEeccCcc--------------------------------ccC
Confidence 4567899999999 899999999987654 1 23776654321 111
Q ss_pred ecCCCCCCCCCHHHHHHHhccccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCCcc
Q psy17679 118 GDCSLPGLGLSETDRATLVKQVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTAFT 190 (303)
Q Consensus 118 ~Dl~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~~~ 190 (303)
|--+-+ ++.++-..+|.++-+... +. +..+++.+.+. +++.++.+|+-+.
T Consensus 51 G~~~y~-------sl~dlp~~vDlvvi~vp~-------~~--------~~~~~~~~~~~-g~~~~vi~s~Gf~ 100 (129)
T d2csua1 51 GVKAYK-------SVKDIPDEIDLAIIVVPK-------RF--------VKDTLIQCGEK-GVKGVVIITAGFG 100 (129)
T ss_dssp TEECBS-------STTSCSSCCSEEEECSCH-------HH--------HHHHHHHHHHH-TCCEEEECCCSST
T ss_pred CeEeec-------chhhcCCCCceEEEecCh-------HH--------hHHHHHHHHHc-CCCEEEEeccccc
Confidence 111111 122333578988866442 11 24567777777 8888888888754
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=92.08 E-value=0.099 Score=38.78 Aligned_cols=37 Identities=16% Similarity=0.300 Sum_probs=30.7
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+|||+|.| .|++|..++..|.+.+.++ .|+++.+.+
T Consensus 1 ~gkrivIvG-gG~~G~e~A~~l~~~~~~~-~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVG-GGTGGATAAKYIKLADPSI-EVTLIEPNT 37 (186)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHHCTTS-EEEEECSCS
T ss_pred CCCcEEEEC-ccHHHHHHHHHHHHcCCCC-cEEEEECCC
Confidence 368999999 5999999999999998753 477887765
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=92.04 E-value=0.25 Score=35.50 Aligned_cols=22 Identities=23% Similarity=0.382 Sum_probs=20.1
Q ss_pred EEEEeCCcchhHHHHHHHHHhc
Q psy17679 46 TIFLTGGTGFMGKTVVEKLLRS 67 (303)
Q Consensus 46 ~vlItGatG~iG~~l~~~Ll~~ 67 (303)
||.|.|++|-.|+.+++.+.+.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~ 22 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAA 22 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS
T ss_pred CEEEECCCCHHHHHHHHHHHhC
Confidence 6999999999999999988776
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=91.97 E-value=0.2 Score=37.04 Aligned_cols=37 Identities=16% Similarity=0.286 Sum_probs=24.5
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEE-eCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLL-VRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~-~R~~ 81 (303)
++.||.|.| +|.+|..+...+++. +....++.+ +|++
T Consensus 3 kkirvaIIG-aG~ig~~~~~~~l~~-~~~~el~avas~~~ 40 (157)
T d1nvmb1 3 QKLKVAIIG-SGNIGTDLMIKVLRN-AKYLEMGAMVGIDA 40 (157)
T ss_dssp SCEEEEEEC-CSHHHHHHHHHHHHH-CSSEEEEEEECSCT
T ss_pred CCcEEEEEc-CcHHHHHHHHHHHhh-CCcceEEEEEecch
Confidence 356899999 899999766556555 333345555 4554
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=91.87 E-value=0.34 Score=36.34 Aligned_cols=38 Identities=18% Similarity=0.084 Sum_probs=31.1
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCc
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKG 83 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~ 83 (303)
.+.+|+|+|+ |.+|...+..+...|.. +|+++++++.+
T Consensus 29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~--~Vi~vd~~~~k 66 (176)
T d1d1ta2 29 PGSTCVVFGL-GGVGLSVIMGCKSAGAS--RIIGIDLNKDK 66 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCS--EEEEECSCGGG
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCc--eEEEecCcHHH
Confidence 4568999985 99999999999988864 49999987653
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=91.86 E-value=0.38 Score=35.95 Aligned_cols=38 Identities=16% Similarity=0.017 Sum_probs=31.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..+.+|+|.|+ |.+|...+..+...|.. .|++.+++++
T Consensus 26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~--~Vi~~d~~~~ 63 (174)
T d1p0fa2 26 TPGSTCAVFGL-GGVGFSAIVGCKAAGAS--RIIGVGTHKD 63 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCS--EEEEECSCGG
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCc--eeeccCChHH
Confidence 45678999985 99999999999988864 4888888754
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=91.84 E-value=0.15 Score=38.64 Aligned_cols=38 Identities=13% Similarity=0.128 Sum_probs=33.0
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
....+|+|+|.| .|..|...+..|.++|++ |+++.+.+
T Consensus 39 ~~~~~k~V~IIG-aGPAGL~AA~~la~~G~~---Vtl~E~~~ 76 (179)
T d1ps9a3 39 PAVQKKNLAVVG-AGPAGLAFAINAAARGHQ---VTLFDAHS 76 (179)
T ss_dssp SCSSCCEEEEEC-CSHHHHHHHHHHHTTTCE---EEEEESSS
T ss_pred CCCCCcEEEEEC-ccHHHHHHHHHHHhhccc---eEEEeccC
Confidence 345678999999 599999999999999998 88988865
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=91.61 E-value=1.5 Score=32.36 Aligned_cols=84 Identities=18% Similarity=0.183 Sum_probs=44.4
Q ss_pred CcEEEEeCCcchhHHH-HHHHHHhc--CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 44 DKTIFLTGGTGFMGKT-VVEKLLRS--CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 44 ~~~vlItGatG~iG~~-l~~~Ll~~--g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
..||.|.|| |.+|.. ++..|+.. ...+..|...+.++....... ....... .. ......+....
T Consensus 3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~---~~~~~~~----~~----~~~~~~~~~~~- 69 (167)
T d1u8xx1 3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIA---GACDVFI----RE----KAPDIEFAATT- 69 (167)
T ss_dssp CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHH---HHHHHHH----HH----HCTTSEEEEES-
T ss_pred CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHH---HHHHHHH----HH----hCCCcceEecC-
Confidence 358999997 555544 34444443 122346888888754322111 1111100 00 01233333222
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceecc
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVR 150 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~ 150 (303)
+..+++++.|+||.+++...
T Consensus 70 ----------d~~eal~~AD~Vvitag~~~ 89 (167)
T d1u8xx1 70 ----------DPEEAFTDVDFVMAHIRVGK 89 (167)
T ss_dssp ----------CHHHHHSSCSEEEECCCTTH
T ss_pred ----------ChhhccCCCCEEEECCCcCC
Confidence 26778899999999999754
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.60 E-value=0.11 Score=36.74 Aligned_cols=34 Identities=15% Similarity=0.201 Sum_probs=30.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.++++|.| .|++|-.++..|.+.|.+ |+++.|.+
T Consensus 23 p~~~vIiG-~G~ig~E~A~~l~~lG~~---Vtii~~~~ 56 (122)
T d1v59a2 23 PKRLTIIG-GGIIGLEMGSVYSRLGSK---VTVVEFQP 56 (122)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSS
T ss_pred CCeEEEEC-CCchHHHHHHHHHhhCcc---eeEEEecc
Confidence 47899998 599999999999999998 88888865
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=91.56 E-value=1.5 Score=32.36 Aligned_cols=120 Identities=12% Similarity=0.035 Sum_probs=59.3
Q ss_pred CcEEEEeCC-cchhHHHHHHHHHhc-CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 44 DKTIFLTGG-TGFMGKTVVEKLLRS-CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 44 ~~~vlItGa-tG~iG~~l~~~Ll~~-g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
++||.|.|| +.+.+..++.-+... ...+..|..++.++... ..+.++.+-...+.. .+........+
T Consensus 1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~-~~~~~d~~~~~~~~~----------~~~~~~~~~~t 69 (169)
T d1s6ya1 1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKE-KLEIVGALAKRMVEK----------AGVPIEIHLTL 69 (169)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHH-HHHHHHHHHHHHHHH----------TTCCCEEEEES
T ss_pred CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHH-HHHHHHHHHHHHHHh----------cCCCceeeecC
Confidence 368999996 334444444444433 12234688888875421 122222211111100 11222222222
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceeccccc-cHHH--------------------HHhhhHHHHHHHHHHHHhcCCCc
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRFDE-HIKM--------------------AVKINVCGVQAMLQLAREMKDLK 180 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~~-~~~~--------------------~~~~N~~~~~~ll~~a~~~~~~~ 180 (303)
| ....+++.|+||.+++...... ...+ ...-|+.-.+.+++.+.+. ...
T Consensus 70 d---------~~~al~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~-~pd 139 (169)
T d1s6ya1 70 D---------RRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEEL-CPD 139 (169)
T ss_dssp C---------HHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHH-CTT
T ss_pred C---------chhhcCCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhc-CCC
Confidence 2 5677889999999999754211 1111 1123666667777777776 444
Q ss_pred eEEE
Q psy17679 181 AFVH 184 (303)
Q Consensus 181 r~i~ 184 (303)
.++.
T Consensus 140 a~~i 143 (169)
T d1s6ya1 140 AWLI 143 (169)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 4443
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.54 E-value=0.24 Score=37.23 Aligned_cols=36 Identities=11% Similarity=0.175 Sum_probs=31.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++|+|+|.|.+.-+|+-++..|+++|.. |+.+.+
T Consensus 26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaT---Vt~~~~ 61 (171)
T d1edza1 26 RLYGKKCIVINRSEIVGRPLAALLANDGAT---VYSVDV 61 (171)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCE---EEEECS
T ss_pred CCCCCEEEEECCccccHHHHHHHHHHCCCE---EEEecc
Confidence 578999999999999999999999999876 665544
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=91.46 E-value=0.12 Score=36.17 Aligned_cols=34 Identities=12% Similarity=0.169 Sum_probs=30.1
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.++|+|.| .|++|..++..|.+.|.+ |+++.|.+
T Consensus 21 p~~vvIiG-gG~ig~E~A~~l~~~G~~---Vtlve~~~ 54 (116)
T d1gesa2 21 PERVAVVG-AGYIGVELGGVINGLGAK---THLFEMFD 54 (116)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSS
T ss_pred CCEEEEEC-CChhhHHHHHHhhccccE---EEEEeecc
Confidence 47899998 599999999999999987 88888875
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=91.42 E-value=0.14 Score=39.69 Aligned_cols=36 Identities=11% Similarity=0.194 Sum_probs=30.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
.+++++|.|.| .|-+|+++++.|.+.|.. |++.+.+
T Consensus 24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gak---vvv~d~d 59 (201)
T d1c1da1 24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQ---LLVADTD 59 (201)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSC
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCE---EEEecch
Confidence 37889999998 899999999999999987 6666554
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=91.33 E-value=0.17 Score=37.82 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=27.8
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+.+|+|.|+ |.+|...+..+...|.. .|++.++++
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~--~vv~~~~~~ 67 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPA--TVIALDVKE 67 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCC--EEEEEESSH
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCc--ccccccchh
Confidence 3568999985 99999999988888765 366677653
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=91.31 E-value=0.12 Score=37.07 Aligned_cols=36 Identities=22% Similarity=0.486 Sum_probs=31.1
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..++|+|.| .|++|-.++..|.+.|.+ |+++.+.+.
T Consensus 34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~---Vtvie~~~~ 69 (133)
T d1q1ra2 34 ADNRLVVIG-GGYIGLEVAATAIKANMH---VTLLDTAAR 69 (133)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSSS
T ss_pred cCCEEEEEC-CchHHHHHHHHHHhhCcc---eeeeeeccc
Confidence 357899998 599999999999999988 888888753
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=91.14 E-value=0.13 Score=35.88 Aligned_cols=35 Identities=9% Similarity=0.267 Sum_probs=30.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
+++++|.| .|++|-.++..|.+.|.+ |+++.|.+.
T Consensus 21 p~~vvIiG-gG~~G~E~A~~l~~~g~~---Vtlve~~~~ 55 (115)
T d1lvla2 21 PQHLVVVG-GGYIGLELGIAYRKLGAQ---VSVVEARER 55 (115)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHHTCE---EEEECSSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHHhhcccc---eEEEeeecc
Confidence 47899998 599999999999999987 888888653
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=91.01 E-value=0.35 Score=39.54 Aligned_cols=30 Identities=27% Similarity=0.277 Sum_probs=27.0
Q ss_pred cccCCcEEEEeCCcchhHHHHHHHHHhcCCC
Q psy17679 40 EFYRDKTIFLTGGTGFMGKTVVEKLLRSCPH 70 (303)
Q Consensus 40 ~~~~~~~vlItGatG~iG~~l~~~Ll~~g~~ 70 (303)
..+++++|+|-| .|-+|+++++.|.+.|..
T Consensus 32 ~~L~gktvaIqG-fGnVG~~~A~~L~e~Gak 61 (293)
T d1hwxa1 32 PGFGDKTFAVQG-FGNVGLHSMRYLHRFGAK 61 (293)
T ss_dssp SSSTTCEEEEEC-CSHHHHHHHHHHHHTTCE
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCE
Confidence 357889999998 799999999999999987
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=91.01 E-value=0.11 Score=43.22 Aligned_cols=35 Identities=20% Similarity=0.465 Sum_probs=30.2
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
+.|||+|.| +|..|...|..|.+.|++ |.++-+.+
T Consensus 1 k~KKI~IIG-aG~sGL~aA~~L~k~G~~---V~viEk~~ 35 (314)
T d2bi7a1 1 KSKKILIVG-AGFSGAVIGRQLAEKGHQ---VHIIDQRD 35 (314)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHTTTCE---EEEEESSS
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHhCCCC---EEEEECCC
Confidence 358999998 699999999999999987 88877764
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=90.95 E-value=0.13 Score=36.70 Aligned_cols=26 Identities=15% Similarity=0.184 Sum_probs=23.6
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPH 70 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~ 70 (303)
|||.|.|++|-.|+.|++.+.+.|++
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~ 26 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHE 26 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCe
Confidence 68999999999999999988888776
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.83 E-value=0.33 Score=35.80 Aligned_cols=36 Identities=14% Similarity=0.099 Sum_probs=29.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+.+|+|.|+ |.+|...+..+...|.+ |+++++++
T Consensus 26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~---Vi~~~~~~ 61 (166)
T d1llua2 26 RPGQWVAISGI-GGLGHVAVQYARAMGLH---VAAIDIDD 61 (166)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCH
T ss_pred CCCCEEEEeec-cccHHHHHHHHHHcCCc---cceecchh
Confidence 34578999985 99999988888888865 88888864
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=90.50 E-value=0.12 Score=38.85 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=30.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.+|-+.| .|.+|..+++.|++.|++ |++.+|+++
T Consensus 3 ~nIg~IG-lG~MG~~mA~~L~~~G~~---V~v~dr~~~ 36 (176)
T d2pgda2 3 ADIALIG-LAVMGQNLILNMNDHGFV---VCAFNRTVS 36 (176)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCC---EEEECSSTH
T ss_pred CcEEEEe-EhHHHHHHHHHHHHCCCe---EEEEcCCHH
Confidence 5688998 799999999999999998 899999864
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=90.33 E-value=0.15 Score=40.07 Aligned_cols=33 Identities=24% Similarity=0.397 Sum_probs=29.3
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRP 80 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~ 80 (303)
.+||+|.| .|..|...+..|.++|++ |.++.|.
T Consensus 6 ~~kVvVIG-aGiaGl~~A~~L~~~G~~---V~vier~ 38 (268)
T d1c0pa1 6 QKRVVVLG-SGVIGLSSALILARKGYS---VHILARD 38 (268)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCcEEEEC-ccHHHHHHHHHHHHCCCC---EEEEeCC
Confidence 36899998 599999999999999997 8888885
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=90.30 E-value=0.52 Score=35.06 Aligned_cols=80 Identities=11% Similarity=0.183 Sum_probs=56.2
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
....+|+|.| .|-.|..-+......|.. |++++.+.. ..++++..+. ..++....
T Consensus 30 v~pa~V~ViG-aGvaG~~A~~~A~~lGA~---V~~~D~~~~---~l~~l~~~~~---------------~~~~~~~~--- 84 (168)
T d1pjca1 30 VKPGKVVILG-GGVVGTEAAKMAVGLGAQ---VQIFDINVE---RLSYLETLFG---------------SRVELLYS--- 84 (168)
T ss_dssp BCCCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHHG---------------GGSEEEEC---
T ss_pred CCCcEEEEEC-CChHHHHHHHHHhhCCCE---EEEEeCcHH---HHHHHHHhhc---------------ccceeehh---
Confidence 4567999998 599999999999999887 999998642 3344444433 23333322
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceecccc
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATVRFD 152 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~~~~ 152 (303)
+. +.+.+.+.++|+||.++-+....
T Consensus 85 ~~------~~l~~~~~~aDivI~aalipG~~ 109 (168)
T d1pjca1 85 NS------AEIETAVAEADLLIGAVLVPGRR 109 (168)
T ss_dssp CH------HHHHHHHHTCSEEEECCCCTTSS
T ss_pred hh------hhHHHhhccCcEEEEeeecCCcc
Confidence 22 26788889999999998875443
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=90.20 E-value=0.41 Score=35.41 Aligned_cols=79 Identities=13% Similarity=0.044 Sum_probs=43.4
Q ss_pred cEEEEeCCcchhHHHHHHHHH-hc--CCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLL-RS--CPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCS 121 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll-~~--g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 121 (303)
|||.|.|| |.+|...+-..+ .. ...+..|..++.++.... ...++... ... ....+.. +
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~---~~~d~~~~-----~~~------~~~~~~~---t 62 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQK---IVVDFVKR-----LVK------DRFKVLI---S 62 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHH---HHHHHHHH-----HHT------TSSEEEE---C
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHH---HHHHHHHh-----hhc------cCceEEE---e
Confidence 67999997 667766654432 22 123456888888654221 12221111 111 1222222 2
Q ss_pred CCCCCCCHHHHHHHhccccEEEEcceec
Q psy17679 122 LPGLGLSETDRATLVKQVNIVFHGAATV 149 (303)
Q Consensus 122 d~~~~~~~~~~~~~~~~~dvVi~~a~~~ 149 (303)
. .....++++|+||..++..
T Consensus 63 ~--------~~~~~l~~aDvVVita~~~ 82 (162)
T d1up7a1 63 D--------TFEGAVVDAKYVIFQFRPG 82 (162)
T ss_dssp S--------SHHHHHTTCSEEEECCCTT
T ss_pred c--------CcccccCCCCEEEEecccC
Confidence 1 2467789999999999974
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=89.91 E-value=0.17 Score=35.65 Aligned_cols=35 Identities=14% Similarity=0.261 Sum_probs=31.0
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.++++|.| .|++|-.++..|.+.|.+ |+++.|++.
T Consensus 25 p~~~viiG-~G~iglE~A~~~~~~G~~---Vtvi~~~~~ 59 (123)
T d1dxla2 25 PKKLVVIG-AGYIGLEMGSVWGRIGSE---VTVVEFASE 59 (123)
T ss_dssp CSEEEESC-CSHHHHHHHHHHHHHTCE---EEEECSSSS
T ss_pred CCeEEEEc-cchHHHHHHHHHHhcCCe---EEEEEEccc
Confidence 47899998 599999999999999987 889988764
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=89.67 E-value=0.18 Score=38.07 Aligned_cols=37 Identities=19% Similarity=0.146 Sum_probs=30.9
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.++||+|.| .|..|...+..|.+.|++ .|+++.|++.
T Consensus 3 ~~~kVaIIG-aGpaGl~aA~~l~~~G~~--~V~v~E~~~~ 39 (196)
T d1gtea4 3 YSAKIALLG-AGPASISCASFLARLGYS--DITIFEKQEY 39 (196)
T ss_dssp GGCCEEEEC-CSHHHHHHHHHHHHTTCC--CEEEEESSSS
T ss_pred CCCEEEEEC-ChHHHHHHHHHHHHCCCC--eEEEEEecCc
Confidence 458899998 599999999999999983 1788888754
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=89.46 E-value=0.76 Score=34.96 Aligned_cols=37 Identities=11% Similarity=0.059 Sum_probs=28.1
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+.+|+|.|+ |.+|...+..+...|.. .|++.++++
T Consensus 24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~--~Vi~~d~~~ 60 (195)
T d1kola2 24 GPGSTVYVAGA-GPVGLAAAASARLLGAA--VVIVGDLNP 60 (195)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCS--EEEEEESCH
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHhhccc--ceeeecccc
Confidence 45678999985 99998888777777664 488888764
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=89.44 E-value=0.44 Score=35.01 Aligned_cols=36 Identities=11% Similarity=0.011 Sum_probs=28.5
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
..+.+|+|.|+ |.+|...+..+...|.+ |++.++++
T Consensus 26 ~~g~~vlv~G~-G~iG~~a~~~a~~~g~~---v~~~~~~~ 61 (168)
T d1rjwa2 26 KPGEWVAIYGI-GGLGHVAVQYAKAMGLN---VVAVDIGD 61 (168)
T ss_dssp CTTCEEEEECC-STTHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CCCCEEEEeec-ccchhhhhHHHhcCCCe---EeccCCCH
Confidence 34578999975 99999988888887776 88888764
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=89.39 E-value=0.24 Score=34.50 Aligned_cols=36 Identities=14% Similarity=0.079 Sum_probs=30.6
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.+++|+|.| .|++|..++..|...|.+ |+++.|.+.
T Consensus 21 ~~~~vvVvG-gG~ig~E~A~~l~~~g~~---vt~i~~~~~ 56 (121)
T d1mo9a2 21 PGSTVVVVG-GSKTAVEYGCFFNATGRR---TVMLVRTEP 56 (121)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSCT
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcchh---heEeeccch
Confidence 358999998 599999999999999877 888888653
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=89.35 E-value=1.4 Score=32.73 Aligned_cols=37 Identities=16% Similarity=0.255 Sum_probs=23.3
Q ss_pred cCCcEEEEeCCcchhHHHH-HHHHHhcCCCccEEE-EEeCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTV-VEKLLRSCPHLKHIY-LLVRP 80 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l-~~~Ll~~g~~v~~V~-~~~R~ 80 (303)
|++.||.|.| +|.+|..+ +..+.+.+..+ .|. +++++
T Consensus 1 MkkirigiIG-~G~~g~~~h~~~l~~~~~~~-~i~~v~d~~ 39 (181)
T d1zh8a1 1 LRKIRLGIVG-CGIAARELHLPALKNLSHLF-EITAVTSRT 39 (181)
T ss_dssp CCCEEEEEEC-CSHHHHHTHHHHHHTTTTTE-EEEEEECSS
T ss_pred CCCcEEEEEc-CCHHHHHHHHHHHHhCCCCe-EEEEEEecc
Confidence 5567899998 79999864 56665543322 244 44454
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=89.04 E-value=0.18 Score=40.37 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=29.6
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
+|||+|.| .|.-|...+..|.+.|++ |.++.+++
T Consensus 1 ~KkV~IIG-aG~aGL~aA~~La~~G~~---V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIG-AGVSGLAAAYKLKIHGLN---VTVFEAEG 34 (373)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTSCE---EEEECSSS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCC---EEEEeCCC
Confidence 47899998 599999999999999987 88888754
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=88.91 E-value=0.24 Score=35.01 Aligned_cols=34 Identities=9% Similarity=0.144 Sum_probs=30.2
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.++++|.| .|++|-.++..|.+.|.+ |+++.|.+
T Consensus 26 p~~vvIiG-gG~IG~E~A~~~~~~G~~---Vtive~~~ 59 (125)
T d1ojta2 26 PGKLLIIG-GGIIGLEMGTVYSTLGSR---LDVVEMMD 59 (125)
T ss_dssp CSEEEEES-CSHHHHHHHHHHHHHTCE---EEEECSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHhhcCCCE---EEEEEeec
Confidence 47899998 599999999999999988 88888865
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=88.86 E-value=0.16 Score=38.24 Aligned_cols=36 Identities=25% Similarity=0.371 Sum_probs=29.8
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.++|+|+|.| +|+.+++++..|.+.| .|+++.|+.+
T Consensus 16 ~~~k~vlIlG-aGG~arai~~aL~~~~----~i~I~nR~~~ 51 (177)
T d1nvta1 16 VKDKNIVIYG-AGGAARAVAFELAKDN----NIIIANRTVE 51 (177)
T ss_dssp CCSCEEEEEC-CSHHHHHHHHHHTSSS----EEEEECSSHH
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHcccc----ceeeehhhhh
Confidence 5779999998 5889999999997654 4999999743
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=88.55 E-value=0.21 Score=40.61 Aligned_cols=37 Identities=16% Similarity=0.254 Sum_probs=31.6
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
....|+|+|.| +|..|...+..|.+.|++ |.++.+.+
T Consensus 27 ~~~pkkV~IIG-aG~aGLsaA~~L~~~G~~---V~vlE~~~ 63 (370)
T d2iida1 27 TSNPKHVVIVG-AGMAGLSAAYVLAGAGHQ---VTVLEASE 63 (370)
T ss_dssp CSSCCEEEEEC-CBHHHHHHHHHHHHHTCE---EEEECSSS
T ss_pred CCCCCeEEEEC-CCHHHHHHHHHHHHCCCC---EEEEeCCC
Confidence 44568999998 599999999999999987 88888754
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.45 E-value=0.41 Score=36.85 Aligned_cols=26 Identities=19% Similarity=0.308 Sum_probs=22.6
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCc
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHL 71 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v 71 (303)
|||++.| ++..|..+++.|++.|+++
T Consensus 1 MkI~~~G-~~~~~~~~l~~L~~~~~~i 26 (203)
T d2bw0a2 1 MKIAVIG-QSLFGQEVYCHLRKEGHEV 26 (203)
T ss_dssp CEEEEEC-CHHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEc-CCHHHHHHHHHHHHCCCcE
Confidence 6799997 6788999999999999884
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=88.06 E-value=0.68 Score=36.34 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=29.8
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
.+++++|+|-| -|-+|+++++.|.+.|.. |++.+.
T Consensus 36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~Gak---vv~~d~ 70 (230)
T d1leha1 36 SLEGLAVSVQG-LGNVAKALCKKLNTEGAK---LVVTDV 70 (230)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECS
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCE---EEeecc
Confidence 47889999998 799999999999999987 655544
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.56 E-value=0.27 Score=36.50 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=32.5
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+.+|+|+|.| .|.+|+.+++.|...|.. |.+....+
T Consensus 21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~---V~v~e~dp 57 (163)
T d1li4a1 21 MIAGKVAVVAG-YGDVGKGCAQALRGFGAR---VIITEIDP 57 (163)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred eecCCEEEEec-cccccHHHHHHHHhCCCe---eEeeeccc
Confidence 46789999998 899999999999999987 88877753
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=87.36 E-value=0.26 Score=39.20 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=28.9
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|+|+|.|| |..|...+..|.+.|++ |+++-+++
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~G~~---V~vlE~~~ 33 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSRGTD---AVLLESSA 33 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTTTCC---EEEECSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCC---EEEEecCC
Confidence 57999995 99999999999999998 88887754
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=87.30 E-value=0.46 Score=37.08 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=31.7
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
....++|+|.| .|..|.+.+..|.+.|++ |+++.+..
T Consensus 46 ~~~~k~VvIIG-aGpAGl~aA~~l~~~G~~---v~l~E~~~ 82 (233)
T d1djqa3 46 TKNKDSVLIVG-AGPSGSEAARVLMESGYT---VHLTDTAE 82 (233)
T ss_dssp CSSCCEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSS
T ss_pred ccCCceEEEEc-ccHHHHHHHHHHHHhccc---eeeEeecc
Confidence 34678999999 599999999999999998 88887765
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=87.18 E-value=1.6 Score=29.85 Aligned_cols=38 Identities=18% Similarity=0.302 Sum_probs=28.9
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.++++|.|| |++|-.++..|.+.|..-.+|+++.|.+.
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 478999995 99999999877666543345888888753
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=87.10 E-value=2.4 Score=30.74 Aligned_cols=37 Identities=11% Similarity=0.015 Sum_probs=22.9
Q ss_pred CcEEEEeCCcchhHHH-HHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKT-VVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~-l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
++||.|.| +|.+|.. .+..|... ..+..+.++++++.
T Consensus 1 Kiri~iIG-~G~~g~~~~~~~l~~~-~~~~i~~v~d~~~~ 38 (164)
T d1tlta1 1 KLRIGVVG-LGGIAQKAWLPVLAAA-SDWTLQGAWSPTRA 38 (164)
T ss_dssp CEEEEEEC-CSTHHHHTHHHHHHSC-SSEEEEEEECSSCT
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHhC-CCcEEEEEEechhH
Confidence 36899998 6999975 45555444 23333455566554
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=86.62 E-value=0.35 Score=38.05 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=29.7
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+||+|.| .|..|..++..|.+.|++ |.++.|.+
T Consensus 4 ~~kV~IiG-aG~aGl~~A~~L~~~G~~---v~v~Er~~ 37 (265)
T d2voua1 4 TDRIAVVG-GSISGLTAALMLRDAGVD---VDVYERSP 37 (265)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSSS
T ss_pred CCcEEEEC-cCHHHHHHHHHHHHCCCC---EEEEeCCC
Confidence 36899998 599999999999999987 88998864
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=86.38 E-value=0.49 Score=35.76 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=28.5
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|||+|.| .|++|..++..|.+.+.+. .|+++.|.+
T Consensus 1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~-~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLG-SSHGGYEAVEELLNLHPDA-EIQWYEKGD 35 (198)
T ss_dssp CEEEEEC-SSHHHHHHHHHHHHHCTTS-EEEEEESSS
T ss_pred CEEEEEC-CcHHHHHHHHHHHhcCCCC-eEEEEeCCC
Confidence 6899998 5899999999999886553 488887764
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=86.35 E-value=0.38 Score=30.94 Aligned_cols=35 Identities=11% Similarity=0.120 Sum_probs=29.7
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
+|+|.|.| +|.+|+=++..-...|++ +++++-.++
T Consensus 1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~---v~vldp~~~ 35 (78)
T d3etja2 1 MKQVCVLG-NGQLGRMLRQAGEPLGIA---VWPVGLDAE 35 (78)
T ss_dssp CEEEEEEB-CSHHHHHHHHHHGGGTEE---EEEECTTSC
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCE---EEEEcCCCC
Confidence 47899998 699999999999999988 777776544
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=86.27 E-value=1.1 Score=32.04 Aligned_cols=34 Identities=26% Similarity=0.277 Sum_probs=28.9
Q ss_pred CCcEEEEeCCc---chhHHHHHHHHHhcCCCccEEEEEeC
Q psy17679 43 RDKTIFLTGGT---GFMGKTVVEKLLRSCPHLKHIYLLVR 79 (303)
Q Consensus 43 ~~~~vlItGat---G~iG~~l~~~Ll~~g~~v~~V~~~~R 79 (303)
+.|+|.|.|++ +-.|+.+++.|++.|++ |+.+.-
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~---v~pVnP 54 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYD---VYPVNP 54 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCE---EEEECT
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCE---EEEECC
Confidence 46899999999 78999999999999996 766543
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=86.27 E-value=2 Score=31.83 Aligned_cols=36 Identities=17% Similarity=0.227 Sum_probs=26.7
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+||.|-| .|-||+.+++.+++. .++..|.+-+.++
T Consensus 2 ~irIaING-fGRIGR~v~Ral~~~-~dieiVaINd~~~ 37 (172)
T d2czca2 2 KVKVGVNG-YGTIGKRVAYAVTKQ-DDMELIGITKTKP 37 (172)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTC-TTEEEEEEEESSC
T ss_pred cEEEEEEC-CCHHHHHHHHHHHhC-CCceEEEEecCCC
Confidence 46899998 799999999999876 4444455555443
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=86.15 E-value=0.42 Score=37.00 Aligned_cols=35 Identities=9% Similarity=0.200 Sum_probs=28.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCcc---EEEEEeCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLK---HIYLLVRP 80 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~---~V~~~~R~ 80 (303)
|||+|.| .|.+|...+..|.++|+++. ++..+.+.
T Consensus 1 mkV~VIG-aGi~GlstA~~L~~~G~~v~v~e~~~i~~~~ 38 (246)
T d1kifa1 1 MRVVVIG-AGVIGLSTALCIHERYHSVLQPLDVKVYADR 38 (246)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHHTTTSSSCEEEEEESC
T ss_pred CEEEEEC-chHHHHHHHHHHHHCCCCceEEeeeeecccC
Confidence 6899998 59999999999999998753 45665554
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=86.07 E-value=0.21 Score=38.60 Aligned_cols=25 Identities=20% Similarity=0.057 Sum_probs=21.4
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPH 70 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~ 70 (303)
|||+++| ++..|..+++.|++.|++
T Consensus 1 Mkiv~~~-~~~~g~~~l~~L~~~g~~ 25 (203)
T d2blna2 1 MKTVVFA-YHDMGCLGIEALLAAGYE 25 (203)
T ss_dssp CEEEEEE-CHHHHHHHHHHHHHTTCE
T ss_pred CeEEEEe-cCHHHHHHHHHHHHCCCC
Confidence 6788886 566899999999999887
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=85.16 E-value=0.62 Score=32.89 Aligned_cols=37 Identities=14% Similarity=0.180 Sum_probs=28.9
Q ss_pred CCcEEEEeCCc----------chhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 43 RDKTIFLTGGT----------GFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 43 ~~~~vlItGat----------G~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..+||||.|+. -+.+.+.++.|.+.|++ ++.+.-++.
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~---~iliN~NP~ 52 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYR---VINVNSNPA 52 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCE---EEEECSCTT
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCe---EEEecCchH
Confidence 45899999973 34789999999999998 666666554
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=85.00 E-value=2.8 Score=28.45 Aligned_cols=38 Identities=13% Similarity=0.105 Sum_probs=27.7
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
.++++|.| .|++|-.++..|.+.+..-..|+++.|.+.
T Consensus 18 p~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~~ 55 (117)
T d1feca2 18 PKRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGDM 55 (117)
T ss_dssp CSEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CCeEEEEC-CChHHHHHHHHhHhhcccccccceeccccc
Confidence 47899998 599999999876554222234889888753
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=84.62 E-value=0.4 Score=36.43 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=26.3
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|||.|.| .|++|..++..| ++|++ |++++-++
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~g~~---V~g~Din~ 32 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SLQNE---VTIVDILP 32 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSE---EEEECSCH
T ss_pred CEEEEEC-CChhHHHHHHHH-HCCCc---EEEEECCH
Confidence 6899997 899999998655 67887 88988764
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=83.96 E-value=0.5 Score=37.50 Aligned_cols=31 Identities=16% Similarity=0.280 Sum_probs=27.9
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|+|.| .|..|..++..|.++|.+ |.++.+..
T Consensus 7 vvIIG-aGi~Gls~A~~La~~G~~---V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIG-GGIIGSAIAYYLAKENKN---TALFESGT 37 (276)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCc---EEEEeCCC
Confidence 89998 599999999999999987 88998864
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=83.77 E-value=2 Score=29.47 Aligned_cols=31 Identities=19% Similarity=0.328 Sum_probs=26.7
Q ss_pred cEEEEeCCc---chhHHHHHHHHHhcCCCccEEEEEe
Q psy17679 45 KTIFLTGGT---GFMGKTVVEKLLRSCPHLKHIYLLV 78 (303)
Q Consensus 45 ~~vlItGat---G~iG~~l~~~Ll~~g~~v~~V~~~~ 78 (303)
|+|.|.|++ +-.|+.+++.|++.|++ |+.+.
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~---V~pVn 35 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFE---VLPVN 35 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCE---EEEEC
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCE---EEEEc
Confidence 689999988 77999999999999996 76654
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=83.20 E-value=4.9 Score=27.76 Aligned_cols=93 Identities=10% Similarity=0.045 Sum_probs=52.7
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeC-CCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVR-PKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDCSL 122 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R-~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 122 (303)
+.+|+|.| +|.+|+.++..+... ..+. +.++.- ++.... ..-.++.++..|
T Consensus 3 ~~~v~I~G-aG~~G~~l~~~l~~~-~~~~-iv~fiDdd~~k~G----------------------~~I~Gi~V~~~~--- 54 (126)
T d2dt5a2 3 KWGLCIVG-MGRLGSALADYPGFG-ESFE-LRGFFDVDPEKVG----------------------RPVRGGVIEHVD--- 54 (126)
T ss_dssp CEEEEEEC-CSHHHHHHHHCSCCC-SSEE-EEEEEESCTTTTT----------------------CEETTEEEEEGG---
T ss_pred CceEEEEc-CCHHHHHHHHhHhhc-CCcE-EEEEEeCchHhcC----------------------CEECCEEEecHH---
Confidence 34899998 599999999887543 2332 555444 332111 011355555332
Q ss_pred CCCCCCHHHHHHHhc-cccEEEEcceeccccccHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeCC
Q psy17679 123 PGLGLSETDRATLVK-QVNIVFHGAATVRFDEHIKMAVKINVCGVQAMLQLAREMKDLKAFVHVSTA 188 (303)
Q Consensus 123 ~~~~~~~~~~~~~~~-~~dvVi~~a~~~~~~~~~~~~~~~N~~~~~~ll~~a~~~~~~~r~i~iSS~ 188 (303)
++.++.+ .+++++-+... .....+++.+.++ +++.+..++..
T Consensus 55 --------~l~~~~~~~i~iai~~i~~---------------~~~~~I~d~l~~~-gIk~I~~f~~~ 97 (126)
T d2dt5a2 55 --------LLPQRVPGRIEIALLTVPR---------------EAAQKAADLLVAA-GIKGILNFAPV 97 (126)
T ss_dssp --------GHHHHSTTTCCEEEECSCH---------------HHHHHHHHHHHHH-TCCEEEECSSS
T ss_pred --------HHHHHHhhcccEEEEeCCH---------------HHHHHHHHHHHHc-CCCEEeecCce
Confidence 3444444 56665544331 1124567778887 88877766555
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=83.00 E-value=0.63 Score=37.86 Aligned_cols=34 Identities=12% Similarity=0.333 Sum_probs=28.8
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|..|+|.| +|..|..+|..|.+.|++ |.++.+.+
T Consensus 1 M~dv~IIG-aG~sGl~~A~~L~~~g~~---V~iiEk~~ 34 (298)
T d1i8ta1 1 MYDYIIVG-SGLFGAVCANELKKLNKK---VLVIEKRN 34 (298)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHGGGTCC---EEEECSSS
T ss_pred CccEEEEC-CcHHHHHHHHHHHhCCCc---EEEEECCC
Confidence 34699998 599999999999999988 87877754
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=83.00 E-value=1.3 Score=30.76 Aligned_cols=37 Identities=11% Similarity=0.092 Sum_probs=28.8
Q ss_pred CCcEEEEeCCcc----------hhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 43 RDKTIFLTGGTG----------FMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 43 ~~~~vlItGatG----------~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..++|||.|+.. +.+.+.++.|.+.|++ ++.+.-++.
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~---~IliN~NPe 49 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYE---TIMVNCNPE 49 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCE---EEEECCCTT
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCe---EEEEecChh
Confidence 458999999733 5789999999999997 666665553
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=82.67 E-value=0.55 Score=37.60 Aligned_cols=33 Identities=18% Similarity=0.206 Sum_probs=29.1
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
.+|+|.|| |..|..++..|.+.|.+ |.++.|.+
T Consensus 3 ~~V~IvGa-Gp~Gl~~A~~L~~~G~~---v~vlE~~~ 35 (292)
T d1k0ia1 3 TQVAIIGA-GPSGLLLGQLLHKAGID---NVILERQT 35 (292)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHHTCC---EEEECSSC
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCC---EEEEeCCC
Confidence 36999995 89999999999999998 88888865
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=82.43 E-value=0.67 Score=35.41 Aligned_cols=31 Identities=13% Similarity=0.184 Sum_probs=28.0
Q ss_pred EEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 47 IFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 47 vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
|+|.| +|..|...+..|.+.|++ |.++.+.+
T Consensus 8 viViG-aG~~Gl~~A~~La~~G~~---V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLG-TGITECILSGLLSVDGKK---VLHIDKQD 38 (297)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCC---EEEEcCCC
Confidence 78888 799999999999999998 88988865
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.40 E-value=0.72 Score=37.10 Aligned_cols=35 Identities=17% Similarity=0.290 Sum_probs=29.4
Q ss_pred CCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCC
Q psy17679 43 RDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPK 81 (303)
Q Consensus 43 ~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~ 81 (303)
+.+||+|.| +|.-|...+..|.+.|++ |.++-++.
T Consensus 4 ~~~kViVIG-aG~aGL~aA~~L~~~G~~---V~VlEa~~ 38 (449)
T d2dw4a2 4 KTGKVIIIG-SGVSGLAAARQLQSFGMD---VTLLEARD 38 (449)
T ss_dssp CCCEEEEEC-CBHHHHHHHHHHHHTTCE---EEEECSSS
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHhCCCC---EEEEeCCC
Confidence 456899998 599999999999999987 87876643
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=81.88 E-value=0.83 Score=33.85 Aligned_cols=27 Identities=15% Similarity=0.217 Sum_probs=23.8
Q ss_pred cEEEEeCCcchhHHHHHHHHHhcCCCcc
Q psy17679 45 KTIFLTGGTGFMGKTVVEKLLRSCPHLK 72 (303)
Q Consensus 45 ~~vlItGatG~iG~~l~~~Ll~~g~~v~ 72 (303)
.+|+|.| .|++|-.++..|.+.|.++.
T Consensus 4 a~VvIIG-gG~~G~e~A~~l~~~g~~v~ 30 (183)
T d1d7ya1 4 APVVVLG-AGLASVSFVAELRQAGYQGL 30 (183)
T ss_dssp SSEEEEC-CSHHHHHHHHHHHHHTCCSC
T ss_pred CCEEEEC-ccHHHHHHHHHHHhcCCceE
Confidence 4699998 69999999999999998865
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=81.25 E-value=2.1 Score=31.38 Aligned_cols=71 Identities=14% Similarity=0.227 Sum_probs=51.2
Q ss_pred ccCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCCcccHHHHHHHHHHhHHHhhhhccCcCcCCceEEEEecC
Q psy17679 41 FYRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKKGKDIQERLDAIFEDRLFWRLRAEVPDFRSKVSAVAGDC 120 (303)
Q Consensus 41 ~~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~v~~~~~Dl 120 (303)
.+.+|+++|.| =|.+|+-++..|...|-. |+++..+| ...+++.. .++++.
T Consensus 20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~---V~V~E~DP-----i~alqA~m----------------dGf~v~---- 70 (163)
T d1v8ba1 20 LISGKIVVICG-YGDVGKGCASSMKGLGAR---VYITEIDP-----ICAIQAVM----------------EGFNVV---- 70 (163)
T ss_dssp CCTTSEEEEEC-CSHHHHHHHHHHHHHTCE---EEEECSCH-----HHHHHHHT----------------TTCEEC----
T ss_pred eecCCEEEEec-ccccchhHHHHHHhCCCE---EEEEecCc-----hhhHHHHh----------------cCCccC----
Confidence 46789999998 799999999999999886 87777653 33443321 233321
Q ss_pred CCCCCCCCHHHHHHHhccccEEEEcceecc
Q psy17679 121 SLPGLGLSETDRATLVKQVNIVFHGAATVR 150 (303)
Q Consensus 121 ~d~~~~~~~~~~~~~~~~~dvVi~~a~~~~ 150 (303)
.+.++++..|++|-+.|..+
T Consensus 71 ----------~~~~a~~~aDi~vTaTGn~~ 90 (163)
T d1v8ba1 71 ----------TLDEIVDKGDFFITCTGNVD 90 (163)
T ss_dssp ----------CHHHHTTTCSEEEECCSSSS
T ss_pred ----------chhHccccCcEEEEcCCCCc
Confidence 25677788899998888644
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=81.00 E-value=0.82 Score=33.66 Aligned_cols=28 Identities=25% Similarity=0.272 Sum_probs=24.5
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCcc
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLK 72 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~ 72 (303)
+++|+|.| .|++|-.++..|.+.|.+++
T Consensus 3 ~~~VvIIG-gG~~G~e~A~~l~~~g~~v~ 30 (185)
T d1q1ra1 3 NDNVVIVG-TGLAGVEVAFGLRASGWEGN 30 (185)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHHHTTCCSE
T ss_pred CCCEEEEC-CcHHHHHHHHHHHHcCCceE
Confidence 46899998 59999999999999998854
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=80.92 E-value=0.71 Score=38.00 Aligned_cols=37 Identities=22% Similarity=0.287 Sum_probs=29.7
Q ss_pred CcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 44 DKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 44 ~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
+|+|+|.| .|..|...+..|+++|.. ..|+++-|...
T Consensus 4 ~KrVaIIG-aG~sGl~~A~~L~~~~~~-~~v~vfEk~~~ 40 (335)
T d2gv8a1 4 IRKIAIIG-AGPSGLVTAKALLAEKAF-DQVTLFERRGS 40 (335)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTTCC-SEEEEECSSSS
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHhCCC-CCEEEEECCCC
Confidence 47899998 599999999999988642 24889888753
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=80.58 E-value=2.9 Score=30.48 Aligned_cols=38 Identities=16% Similarity=0.035 Sum_probs=27.9
Q ss_pred cCCcEEEEeCCcchhHHHHHHHHHhcCCCccEEEEEeCCCC
Q psy17679 42 YRDKTIFLTGGTGFMGKTVVEKLLRSCPHLKHIYLLVRPKK 82 (303)
Q Consensus 42 ~~~~~vlItGatG~iG~~l~~~Ll~~g~~v~~V~~~~R~~~ 82 (303)
..+.+|+|.|+ |.+|...+..+...|.. .|++.++++.
T Consensus 27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~--~Vi~~~~~~~ 64 (175)
T d1cdoa2 27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAK--RIIAVDLNPD 64 (175)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCS--EEEEECSCGG
T ss_pred CCCCEEEEEec-CCccchHHHHHHHHhhc--hheeecchHH
Confidence 34578999986 66887777777777654 3888888754
|