Psyllid ID: psy18077

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-
Protein Sequence
SDVIDQLVSASNRLDEGDKLVSVHINTDPDNSHIPDVSHLPANSHLPGVSDYASDSSDLDDDDDDPRLQINEDEAEMSDPVSTSSQSSSEPVASFDPAYDHLYNLTQLAEVSLAYFNQSNSFNRKSVICNTKDVDTSTANNNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTGGTN
Secondary Structure (PSIPRED)
cHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHccHHHHHHccccccHcccccEcccccHHHHEHHccccccccccccccccccccHHHHHcccccccccccccccccccccccccccEcccccHHHHHHHccccccccccccccccEccccHHHHHccccccEEEcccccccccccccccEccccHHHHHHHHEcccccccccccccccccEccccHHHHHHHHcccccEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHccccccEEcHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHcccccccccccccEEcccccccccccccccEccccHHHHHHHHccccccccccccccccccEccccHHHHHHHHcccccEccccccEEccHHHHHHHcHHHHcccc
Coil and Loop (DISEMBL)
SDVIDQLVSASnrldegdkLVSVHintdpdnshipdvshlpanshlpgvsdyasdssdlddddddprlqinedeaemsdpvstssqsssepvasfdpaydhlyNLTQLAEVSLAYFnqsnsfnrksvicntkdvdtstannnnnesfqcrdcgkhystssnlarhrqihrspddtkartcpqcgklyvsmpaysmhlrthnqicqcphcsksfsrpwllqghirthtgekpfkckvcdKAFADKSNLRAHIqthskvkpfvcekcgkaFALKSYLykhedssclksydssssekpfkckvcdkafadksnLRAHIqthskvkpfvcekcgkaFALKSYLykhedssclksydsssnghlnkfttisfqcrdcgkhystssnlarhrqihrspddtkartcpqcgklyvsmpaysmhlrthnqicqcphcsksfsrpwllqghirthtggtn
Flexible Loop (DISEMBL)
SDVIDQLVSasnrldegdKLVSVHINTDPDNSHIPDVSHLPANSHLPGVSDYASDSSDLDDDDDDPRLQINedeaemsdpvstssqsssepVASFDPAYDHLYNLTQLAEVSLAYFNQSNSFNRKSVICNTKDVdtstannnnnesfqcrdCGKHYStssnlarhrqihrspddtkartcpQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRthtgekpfkCKVCDKAFADKSNLRAhiqthskvkpfvcEKCGKAFALKSYLYKHEDSSCLKsydssssekpfKCKVCDKAFADKSNLRAhiqthskvkpfvcEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYstssnlarhrqihrspddtkartcpQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSfsrpwllqghirthtggtn
Low Complexity Region (SEG)
SDVIDQLVSASNRLDEGDKLVSVHINTDPDNSHIPDVSHLPANSHLPGVsdyasdssdlddddddPRLQINEDEAEMsdpvstssqsssepvasFDPAYDHLYNLTQLAEVSLAYFNQSNSFNRKSVICNTKDVDTSTANNNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDssclksydssssEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDssclksydsssNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTGGTN
Disordered region (IsUnstruct)
***********************************************************************************************DPAYDHLYNLTQLAEVSLAYFNQSNSFNRKSVIC*************************************************TCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHED**C************FKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSY****NGHLNKFTTISFQCRDCGKHY**********************TCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIR*******
Disordered Region (DISOPRED)
****************************************PANSHLPGVSDYASDSSDLDDDDDDPRLQINEDEAEMSDPVSTSSQSSSEPVASFDPAYDHLYNLTQLAEVSLAYFNQSNSFNRKSVICNTKDVDTSTANNNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHI*THT****
Disordered Region (DISEMBL)
SDVIDQLVSASNRLDEGDKLVSVHINTDPDNSHIPDVSHLPANSHLPGV**************DDPRLQINEDE******************ASFDPAYDHLYNLTQLAEVSLAYFNQSNSFNRKSVICNTKDVDTSTANNNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHE****************FKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTGGTN
Disordered Region (DISPRO)
**VIDQLVSASNRLDEGDKLVSVHINTDPDNSHIPDVSHLPANSHLPGVSDYASDSSDLDDDDDDPRLQINEDEAEMSDPVSTSSQSSSEPVASFDPAYDHLYNLTQLAEVSLAYFNQSNSFNRKSVICNTKDVDTSTANNNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTH*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
SDVIDQLVSASNRLDEGDKLVSVHINTDPDNSHIPDVSHLPANSHLPGVSDYASDSSDLDDDDDDPRLQINEDEAEMSDPVSTSSQSSSEPVASFDPAYDHLYNLTQLAEVSLAYFNQSNSFNRKSVICNTKDVDTSTANNNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTGGTN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	451	2.2.26 [Sep-21-2011]
Q96MU6	729	Zinc finger protein 778 O	yes	N/A	0.647	0.400	0.356	1e-50
P10076	861	Zinc finger protein 26 OS	no	N/A	0.618	0.324	0.381	4e-50
Q99M85	348	Transcriptional repressor	no	N/A	0.261	0.339	0.640	5e-49
Q8BTH6	311	Transcriptional repressor	no	N/A	0.281	0.408	0.579	2e-48
Q9BWW7	348	Transcriptional repressor	no	N/A	0.246	0.318	0.659	2e-48
Q15935	545	Zinc finger protein 77 OS	no	N/A	0.678	0.561	0.351	4e-48
Q8N972	641	Zinc finger protein 709 O	no	N/A	0.651	0.458	0.36	5e-48
Q32M78	642	Zinc finger protein 699 O	no	N/A	0.605	0.425	0.369	2e-47
Q6ZNH5	498	Zinc finger protein 497 O	no	N/A	0.705	0.638	0.346	3e-47
Q3ZCX4	644	Zinc finger protein 568 O	no	N/A	0.649	0.454	0.340	7e-47

>sp|Q96MU6|ZN778_HUMAN Zinc finger protein 778 OS=Homo sapiens GN=ZNF778 PE=2 SV=3

 Score =  201 bits (511), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/325 (35%), Positives = 171/325 (52%), Gaps = 33/325 (10%)

Query: 127 VICNTKDVDTSTANNNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKL 186
             C +  +      +   + ++C+DCGK ++ SS+L  H +IH      K   C QCGK 
Sbjct: 429 AFCTSSGLTEHVRTHTGEKPYECKDCGKSFTVSSSLTEHARIH---TGEKPYECKQCGKA 485

Query: 187 YVSMPAYSMHLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADK 244
           +      + H+RTH   +  +C  C K+++R +LL  H++THT EKPF C VC K+F + 
Sbjct: 486 FTGRSGLTKHMRTHTGEKPYECKDCGKAYNRVYLLNEHVKTHTEEKPFICTVCRKSFRNS 545

Query: 245 SNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKA 304
           S L  HIQ H+ +KP+ C+ CGK F + S L +H          + + EKP++CKVC KA
Sbjct: 546 SCLNKHIQIHTGIKPYECKDCGKTFTVSSSLTEH--------IRTHTGEKPYECKVCGKA 597

Query: 305 FADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTT 364
           F   S+L  HI+TH+  KP++C++CGKAFA  S+L +H  +            H  +   
Sbjct: 598 FTTSSHLIVHIRTHTGEKPYICKECGKAFASSSHLIEHRRT------------HTGEKPY 645

Query: 365 ISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHN--Q 422
           I   C +CGK +  SS+L +H +IH      K   C +CGK Y        HL+T+   Q
Sbjct: 646 I---CNECGKAFRASSHLHKHGRIHTGQKPYK---CKECGKAYNRFYLLKEHLKTYTEEQ 699

Query: 423 ICQCPHCSKSFSRPWLLQGHIRTHT 447
           +  C  C KSF     L  H + HT
Sbjct: 700 VFVCKDCGKSFKNSSCLNHHTQIHT 724

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score =  199 bits (505), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/312 (38%), Positives = 172/312 (55%), Gaps = 33/312 (10%)

Query: 141 NNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH 200
           +N  + ++C++CGK +STSS L  H +IH      K   C QCGK      +   HLRTH
Sbjct: 492 HNGEKPYECKECGKAFSTSSGLVEHIRIH---TGEKPFECYQCGKALAHSSSLVGHLRTH 548

Query: 201 N--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVK 258
              +  +C  C K+F+R   L+ H+RTHTGEKP++CK C K F ++S L  HI+TH+  +
Sbjct: 549 TGEKPFECNQCDKTFTRSSYLRIHMRTHTGEKPYECKECGKTFPERSCLTKHIRTHTGER 608

Query: 259 PFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTH 318
           P+ C++CGK F   + L  H          + SSE+PF+CKVC K+F + S+L  H + H
Sbjct: 609 PYECKECGKGFISFAQLTVH--------IKTHSSERPFQCKVCTKSFRNSSSLETHFRIH 660

Query: 319 SKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYST 378
           + VKP+ C  CGKAF  +S L  H     L+++              S+ C++CGK +ST
Sbjct: 661 TGVKPYKCSYCGKAFTARSGLTIH-----LRNHTGEK----------SYACQECGKAFST 705

Query: 379 SSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHN--QICQCPHCSKSFSRP 436
           SS L  H + H+     K   C  CGK + S    ++HL+ H   +  QC  C K+F+  
Sbjct: 706 SSGLIAHIRSHKGE---KPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTVCGKTFTCS 762

Query: 437 WLLQGHIRTHTG 448
             L  H+RTHTG
Sbjct: 763 SYLPVHMRTHTG 774

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q99M85|SCRT1_MOUSE Transcriptional repressor scratch 1 OS=Mus musculus GN=Scrt1 PE=1 SV=1

 Score =  195 bits (496), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 91/142 (64%), Positives = 109/142 (76%)

Query: 149 CRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPH 208
           C +CGK Y+TSSNL+RH+Q HRS D   AR CP CGK+YVSMPA +MHL TH+   +C  
Sbjct: 193 CGECGKTYATSSNLSRHKQTHRSLDSQLARRCPTCGKVYVSMPAMAMHLLTHDLRHKCGV 252

Query: 209 CSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKA 268
           C K+FSRPWLLQGH+R+HTGEKPF C  C KAFAD+SNLRAH+QTHS  K F C++C K+
Sbjct: 253 CGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSAFKHFQCKRCKKS 312

Query: 269 FALKSYLYKHEDSSCLKSYDSS 290
           FALKSYL KH +S+C K   S 
Sbjct: 313 FALKSYLNKHYESACFKGGASG 334

Transcriptional repressor that binds E-box motif CAGGTG (By similarity). Appears to function downstream of proneural bHLH proteins in promoting neural differentiation.

Mus musculus (taxid: 10090)

>sp|Q8BTH6|SCRT2_MOUSE Transcriptional repressor scratch 2 OS=Mus musculus GN=Scrt2 PE=2 SV=2

 Score =  193 bits (491), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 91/157 (57%), Positives = 113/157 (71%)

Query: 139 ANNNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLR 198
           A         C +CGK Y+TSSNL+RH+Q HRS D   AR CP CGK YVSMPA +MH+ 
Sbjct: 153 ATAGGGHRHACAECGKTYATSSNLSRHKQTHRSLDSQLARKCPTCGKAYVSMPALAMHVL 212

Query: 199 THNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVK 258
           THN   +C  C K+FSRPWLLQGH+R+HTGEKPF C  C KAFAD+SNLRAH+QTHS  K
Sbjct: 213 THNLRHKCGVCGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSAFK 272

Query: 259 PFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKP 295
            + C +C K+FALKSYL+KH +++C+K+ +   S  P
Sbjct: 273 HYRCRQCDKSFALKSYLHKHCEAACVKAAEPPPSAGP 309

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q9BWW7|SCRT1_HUMAN Transcriptional repressor scratch 1 OS=Homo sapiens GN=SCRT1 PE=1 SV=1

 Score =  193 bits (490), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 89/135 (65%), Positives = 107/135 (79%)

Query: 151 DCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCS 210
           +CGK Y+TSSNL+RH+Q HRS D   AR CP CGK+YVSMPA +MHL TH+   +C  C 
Sbjct: 195 ECGKTYATSSNLSRHKQTHRSLDSQLARRCPTCGKVYVSMPAMAMHLLTHDLRHKCGVCG 254

Query: 211 KSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFA 270
           K+FSRPWLLQGH+R+HTGEKPF C  C KAFAD+SNLRAH+QTHS  K F C++C K+FA
Sbjct: 255 KAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSAFKHFQCKRCKKSFA 314

Query: 271 LKSYLYKHEDSSCLK 285
           LKSYL KH +S+C K
Sbjct: 315 LKSYLNKHYESACFK 329

Transcriptional repressor that binds E-box motif CAGGTG. Can modulate the action of basic helix-loop-helix (bHLH) transcription factors, critical for neuronal differentiation.

Homo sapiens (taxid: 9606)

>sp|Q15935|ZNF77_HUMAN Zinc finger protein 77 OS=Homo sapiens GN=ZNF77 PE=2 SV=2

 Score =  192 bits (488), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/341 (35%), Positives = 183/341 (53%), Gaps = 35/341 (10%)

Query: 129 CNTKDVDTSTANN----NNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCG 184
           CN +D  T++       ++ +S++C+ CGK +   S+   H   H      K   C  CG
Sbjct: 190 CNCQDSRTASVTYVKSLSSKKSYECQKCGKAFICPSSFRGHVNSH---HGQKTHACKVCG 246

Query: 185 KLYVSMPAYSMHLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFA 242
           K ++     + H+RTH   +  +C  C K+FS P   + H+RTHTGEKP++CK C K+F+
Sbjct: 247 KTFMYYSYLTRHVRTHTGEKPYECKECGKAFSCPSYFREHVRTHTGEKPYECKHCGKSFS 306

Query: 243 DKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCD 302
             S+ R H++TH+  KP  C+ CGKAF   S L +H          + S EKP++CK C 
Sbjct: 307 CYSSFRDHVRTHTGEKPCQCKHCGKAFTCYSSLREHG--------RTHSGEKPYECKECG 358

Query: 303 KAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDS----------SCLKSYD 352
           KAF   S+LRAH++ H+  KP+VC++CGKAF   +Y  +H  +           C K+Y 
Sbjct: 359 KAFRYPSSLRAHMRMHTGEKPYVCKQCGKAFGCPTYFRRHVKTHSGVKPYQCKECGKAYS 418

Query: 353 SSSNGHLNKFTTIS---FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVS 409
            SS+  ++  T      F+C+ CGK +S  S+L  H + H      K   C QCGK +  
Sbjct: 419 FSSSLRIHVRTHTGEKPFECKHCGKAFSCHSSLREHVRTH---SGEKPYECNQCGKAFSH 475

Query: 410 MPAYSMHLRTHNQI--CQCPHCSKSFSRPWLLQGHIRTHTG 448
              +  H+R+H+ +   +C  C K++S    L+ H+RTHTG
Sbjct: 476 AQYFQKHVRSHSGVKPYECTECGKAYSCSSSLRVHVRTHTG 516

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8N972|ZN709_HUMAN Zinc finger protein 709 OS=Homo sapiens GN=ZNF709 PE=2 SV=1

 Score =  192 bits (488), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/325 (36%), Positives = 176/325 (54%), Gaps = 31/325 (9%)

Query: 141 NNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH 200
           +   + ++C+ CGK +S  S+  +H +IH      K   C +CGK ++S+P+Y  H+  H
Sbjct: 302 HTGEKPYKCKKCGKAFSFPSSFRKHERIH---TGEKPYDCKECGKAFISLPSYRRHMIMH 358

Query: 201 --NQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVK 258
             N   +C  C K+F  P   Q H RTHTGEKP++CK C KAF+  S+ R H +TH+  K
Sbjct: 359 TGNGPYKCKECGKAFDCPSSFQIHERTHTGEKPYECKQCGKAFSCSSSFRMHERTHTGEK 418

Query: 259 PFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTH 318
           P  C++CGKAF+  S +  HE         + + EKP++CK C KAF+  S+ R H + H
Sbjct: 419 PHECKQCGKAFSCSSSVRIHE--------RTHTGEKPYECKQCGKAFSCSSSFRMHERIH 470

Query: 319 SKVKPFVCEKCGKAFALKSYLYKHEDS----------SCLKSYDSSSNGHLNKFTTIS-- 366
           +  KP+ C++CGKAF+  S    HE +           C K++  SS+  +++ T     
Sbjct: 471 TGEKPYECKQCGKAFSFSSSFRMHERTHTGEKPYECKQCGKAFSCSSSFRMHERTHTGEK 530

Query: 367 -FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI-- 423
            ++C+ CGK +S SS++  H + H      K   C QCGK +    +  MH RTH  +  
Sbjct: 531 PYECKQCGKAFSCSSSIRIHERTH---TGEKPYECKQCGKAFSCSSSVRMHERTHTGVKP 587

Query: 424 CQCPHCSKSFSRPWLLQGHIRTHTG 448
            +C  C K+FS     + H RTHTG
Sbjct: 588 YECKQCDKAFSCSRSFRIHERTHTG 612

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q32M78|ZN699_HUMAN Zinc finger protein 699 OS=Homo sapiens GN=ZNF699 PE=2 SV=1

 Score =  190 bits (482), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 33/306 (10%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH--NQIC 204
           ++C++CGK +S SS+L  H++IH      K   C +CGK +    + S H R H  ++  
Sbjct: 279 YECKECGKGFSCSSSLTEHKRIH---SGDKPYECKECGKAFSCSSSLSKHKRIHSGDKPY 335

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
           +C  C K+FS    L  HIR HTGEKP++CK C KAF++ S L  H +TH+  KP+ C++
Sbjct: 336 ECKECGKAFSSSSHLIIHIRIHTGEKPYECKECGKAFSESSKLTVHGRTHTGEKPYKCKE 395

Query: 265 CGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPF 324
           CGKA+   S L  H            + EKP++C  C KAF   ++L  H++  S+ KP+
Sbjct: 396 CGKAYNCPSSLSIH--------MRKHTGEKPYECLECGKAFYLPTSLNTHVKNQSREKPY 447

Query: 325 VCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLAR 384
            C++CGKAF            SC  S+ +    H  K   I ++C++CGK +S SS+L  
Sbjct: 448 ECKECGKAF------------SCPSSFRAHVRDHTGK---IQYECKECGKTFSRSSSLTE 492

Query: 385 HRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH--NQICQCPHCSKSFSRPWLLQGH 442
           H + H      K   C +CGK ++S    ++H+RTH   +  +C  C K+F  P  L+ H
Sbjct: 493 HLRTH---SGEKPYECKECGKAFISSSHLTVHIRTHTGEKPYECKKCGKAFIYPSALRIH 549

Query: 443 IRTHTG 448
           +RTHTG
Sbjct: 550 MRTHTG 555

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6ZNH5|ZN497_HUMAN Zinc finger protein 497 OS=Homo sapiens GN=ZNF497 PE=2 SV=2

 Score =  189 bits (480), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/367 (34%), Positives = 178/367 (48%), Gaps = 49/367 (13%)

Query: 119 SNSFNRKSVICNTKDVDTSTANNNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKAR 178
             +F++ S +   + V T        + + C +CGK ++ SSNL++H++IH      K  
Sbjct: 112 GKAFSQGSYLLQHRRVHT------GEKPYTCPECGKAFAWSSNLSQHQRIH---SGEKPY 162

Query: 179 TCPQCGKLYVSMPAYSMHLRTHNQI--CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKV 236
            C +CGK + +      H  TH+ +   +CP C KSF R   L  H RTHTGEKP++C  
Sbjct: 163 ACRECGKAFRAHSQLIHHQETHSGLKPFRCPDCGKSFGRSTTLVQHRRTHTGEKPYECPE 222

Query: 237 CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHED----------SSCLKS 286
           C KAF+  SN   H + H+  +P  C  CGKAF+  S L +H              C K+
Sbjct: 223 CGKAFSWNSNFLEHRRVHTGARPHACRDCGKAFSQSSNLAEHLKIHAGARPHACPDCGKA 282

Query: 287 Y----------DSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALK 336
           +           + SSEKPF C  C KAF + S L  H +TH+  +PF C +CG+AF + 
Sbjct: 283 FVRVAGLRQHRRTHSSEKPFPCAECGKAFRESSQLLQHQRTHTGERPFECAECGQAFVMG 342

Query: 337 SYLYKHED----------SSCLKSYDSSSNGHLNKFT---TISFQCRDCGKHYSTSSNLA 383
           SYL +H            + C K++   SN   ++ T      F C DCGK +  SS LA
Sbjct: 343 SYLAEHRRVHTGEKPHACAQCGKAFSQRSNLLSHRRTHSGAKPFACADCGKAFRGSSGLA 402

Query: 384 RHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHN--QICQCPHCSKSFSRPWLLQG 441
            HR  H      +   C +CGK +        H R H+  +   C HCSK+F R   L  
Sbjct: 403 HHRLSH---TGERPFACAECGKAFRGSSELRQHQRLHSGERPFVCAHCSKAFVRKSELLS 459

Query: 442 HIRTHTG 448
           H RTHTG
Sbjct: 460 HRRTHTG 466

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q3ZCX4|ZN568_HUMAN Zinc finger protein 568 OS=Homo sapiens GN=ZNF568 PE=2 SV=2

 Score =  188 bits (478), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 113/332 (34%), Positives = 177/332 (53%), Gaps = 39/332 (11%)

Query: 121 SFNRKSVICNTKDVDTSTANNNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTC 180
           +F++KS +   + + T        + ++C++CGK +S   NL  H +IH      K   C
Sbjct: 314 AFSQKSNLIEHERIHT------GEKPYECKECGKSFSQKQNLIEHEKIH---TGEKPYAC 364

Query: 181 PQCGKLYVSMPAYSMHLRTH--NQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCD 238
            +CG+ +  M + ++H+R+H   +  +C  C K+FS+  +   H+R+HTGEKP+ C  C 
Sbjct: 365 NECGRAFSRMSSVTLHMRSHTGEKPYKCNKCGKAFSQCSVFIIHMRSHTGEKPYVCSECG 424

Query: 239 KAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKC 298
           KAF+  S+L  H++ H+  KP+ C++CGKAF+ K  L  H+           + EKP++C
Sbjct: 425 KAFSQSSSLTVHMRNHTAEKPYECKECGKAFSRKENLITHQKIH--------TGEKPYEC 476

Query: 299 KVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGH 358
             C KAF   SNL  H + H+  KP+ C  CGKAF+ KS L +HE     K +      H
Sbjct: 477 SECGKAFIQMSNLIRHQRIHTGEKPYACTVCGKAFSQKSNLTEHE-----KIHTGEKPYH 531

Query: 359 LNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLR 418
                     C  CGK +S   NL  H +IH      K   C +CGK +  + + ++H+R
Sbjct: 532 ----------CNQCGKAFSQRQNLLEHEKIHTGEKPFK---CNECGKAFSRISSLTLHVR 578

Query: 419 TH--NQICQCPHCSKSFSRPWLLQGHIRTHTG 448
           +H   +  +C  C K+FS+  LL  H+R+HTG
Sbjct: 579 SHTGEKPYECNKCGKAFSQCSLLIIHMRSHTG 610

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	451
91079250	364	PREDICTED: similar to CG17181 CG17181-PA	0.470	0.582	0.519	1e-65
332021996	527	Transcriptional repressor scratch 1 [Acr	0.410	0.351	0.621	3e-65
340716290	527	PREDICTED: hypothetical protein LOC10064	0.374	0.320	0.697	1e-64
350406465	527	PREDICTED: hypothetical protein LOC10074	0.241	0.206	0.743	2e-63
321466686	308	zinc finger-like protein [Daphnia pulex]	0.356	0.522	0.698	2e-63
242022105	253	zinc finger protein SNAI1, putative [Ped	0.414	0.739	0.622	2e-63
328785831	525	PREDICTED: zinc finger protein 615-like	0.241	0.207	0.743	3e-63
380018407	527	PREDICTED: zinc finger and SCAN domain-c	0.241	0.206	0.743	3e-63
383853766	514	PREDICTED: uncharacterized protein LOC10	0.241	0.212	0.75	4e-63
157103737	580	hypothetical protein AaeL_AAEL003978 [Ae	0.199	0.155	0.810	4e-62

>gi|91079250|ref|XP_971329.1| PREDICTED: similar to CG17181 CG17181-PA [Tribolium castaneum] gi|270004833|gb|EFA01281.1| hypothetical protein TcasGA2_TC002803 [Tribolium castaneum]

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 132/254 (51%), Positives = 162/254 (63%), Gaps = 42/254 (16%)

Query: 70  INEDEAEMSDPVSTSSQSSSEPVASFDPAYDHLYNLTQLAEVSLA--------------- 114
           + + E    + VS + +  S+P        D LYNLT+LAEV++A               
Sbjct: 17  VEQKELNSENAVSIADEGDSQP----SECPDELYNLTKLAEVAVATGQILEQTRLSSSND 72

Query: 115 --------------------YFNQSNSFNRKSVICNTKDVDTSTANN---NNNESFQCRD 151
                               +  ++  +NRK V  +T ++  ST  +     +   +C D
Sbjct: 73  QPVFTYTHKLFDKSSRAPRPHLIKTEEYNRKIVSSSTVNIPHSTTQDGVLGESNDHECND 132

Query: 152 CGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSK 211
           CGK YSTSSNLARHRQ HRSP D KAR CP C KLYVSMPA+SMH+RTHNQ C+C +C K
Sbjct: 133 CGKRYSTSSNLARHRQTHRSPGDKKARRCPHCDKLYVSMPAFSMHVRTHNQGCKCQYCGK 192

Query: 212 SFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFAL 271
            FSRPWLLQGHIRTHTGEKPFKC +C+KAFADKSNLRAHIQTHS  KP +C +CGKAFAL
Sbjct: 193 CFSRPWLLQGHIRTHTGEKPFKCTICNKAFADKSNLRAHIQTHSNTKPHICGRCGKAFAL 252

Query: 272 KSYLYKHEDSSCLK 285
           KSYLYKHE+SSC++
Sbjct: 253 KSYLYKHEESSCMR 266

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021996|gb|EGI62322.1| Transcriptional repressor scratch 1 [Acromyrmex echinatior]

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 120/193 (62%), Positives = 146/193 (75%), Gaps = 8/193 (4%)

Query: 123 NRKSVICNTKDVDTSTANNNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQ 182
           NR++ +  +K  D        NE  +C DCGK YSTSSNLARHRQ HRS  D KAR CP 
Sbjct: 201 NRRTAVVESKSED--------NEDHECPDCGKKYSTSSNLARHRQTHRSLGDKKARRCPH 252

Query: 183 CGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFA 242
           C K+YVSMPA+SMH+RTHNQ C+C +C K FSRPWLLQGHIRTHTGEKPFKC +C+KAFA
Sbjct: 253 CDKVYVSMPAFSMHVRTHNQGCKCHYCGKCFSRPWLLQGHIRTHTGEKPFKCTICNKAFA 312

Query: 243 DKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCD 302
           DKSNLRAHIQTHS  KP VC +CGKAFALKSYLYKHE+SSC++S+  SS+++P K    +
Sbjct: 313 DKSNLRAHIQTHSNTKPHVCGRCGKAFALKSYLYKHEESSCMRSHHRSSTDRPDKSDQIE 372

Query: 303 KAFADKSNLRAHI 315
           +     S+++  +
Sbjct: 373 QQRTSSSSIKPSV 385

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340716290|ref|XP_003396632.1| PREDICTED: hypothetical protein LOC100643485 [Bombus terrestris]

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 120/172 (69%), Positives = 141/172 (81%), Gaps = 3/172 (1%)

Query: 126 SVIC-NTKDVDTST--ANNNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQ 182
           S IC N +   TST  + + +NE  +C DCGK YSTSSNLARHRQ HRS  D KAR CP 
Sbjct: 197 STICQNRRTTSTSTEASKSEDNEDHECPDCGKKYSTSSNLARHRQTHRSLGDKKARRCPH 256

Query: 183 CGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFA 242
           C K+YVSMPA+SMH+RTHNQ C+C +C K FSRPWLLQGHIRTHTGEKPFKC +C+KAFA
Sbjct: 257 CDKVYVSMPAFSMHVRTHNQGCKCHYCGKCFSRPWLLQGHIRTHTGEKPFKCTICNKAFA 316

Query: 243 DKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEK 294
           DKSNLRAHIQTHS  KP+VC +CGKAFALKSYLYKHE+SSC++++  SS++K
Sbjct: 317 DKSNLRAHIQTHSNTKPYVCGRCGKAFALKSYLYKHEESSCMRAHHRSSADK 368

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350406465|ref|XP_003487779.1| PREDICTED: hypothetical protein LOC100745572 [Bombus impatiens]

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 113/152 (74%), Positives = 131/152 (86%)

Query: 143 NNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQ 202
           +NE  +C DCGK YSTSSNLARHRQ HRS  D KAR CP C K+YVSMPA+SMH+RTHNQ
Sbjct: 217 DNEDHECPDCGKKYSTSSNLARHRQTHRSLGDKKARRCPHCDKVYVSMPAFSMHVRTHNQ 276

Query: 203 ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
            C+C +C K FSRPWLLQGHIRTHTGEKPFKC +C+KAFADKSNLRAHIQTHS  KP+VC
Sbjct: 277 GCKCHYCGKCFSRPWLLQGHIRTHTGEKPFKCTICNKAFADKSNLRAHIQTHSNTKPYVC 336

Query: 263 EKCGKAFALKSYLYKHEDSSCLKSYDSSSSEK 294
            +CGKAFALKSYLYKHE+SSC++++  SS++K
Sbjct: 337 GRCGKAFALKSYLYKHEESSCMRAHHRSSADK 368

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321466686|gb|EFX77680.1| zinc finger-like protein [Daphnia pulex]

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 116/166 (69%), Positives = 136/166 (81%), Gaps = 5/166 (3%)

Query: 125 KSVICNTKDVDTSTANNNNN-----ESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKART 179
           KSV    K    ST +N+ +     +  +C DCGK YSTSSNLARHRQ HRSP D KAR 
Sbjct: 120 KSVSVVVKGPSISTGSNSGDSHSGPDGHECPDCGKRYSTSSNLARHRQTHRSPADQKARR 179

Query: 180 CPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDK 239
           CP C K+YVS+PA+SMH+RTH+Q C+CP+C KSFSRPWLLQGHIRTHTGEKPF C++C+K
Sbjct: 180 CPHCDKVYVSVPAFSMHVRTHSQGCKCPYCGKSFSRPWLLQGHIRTHTGEKPFTCQICEK 239

Query: 240 AFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLK 285
           AFADKSNLRAHIQTHS +KPF C++CGKAFALKSYLYKHE+SSC+K
Sbjct: 240 AFADKSNLRAHIQTHSNLKPFTCQRCGKAFALKSYLYKHEESSCMK 285

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242022105|ref|XP_002431482.1| zinc finger protein SNAI1, putative [Pediculus humanus corporis] gi|212516770|gb|EEB18744.1| zinc finger protein SNAI1, putative [Pediculus humanus corporis]

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 127/204 (62%), Positives = 144/204 (70%), Gaps = 17/204 (8%)

Query: 100 DHLYNLTQLAEVSLAYFNQSNSFN----RKSVICNTK-------------DVDTSTANNN 142
           D  YNLT+LAEVSLA       +N    R    C  K              +  S   + 
Sbjct: 8   DEFYNLTKLAEVSLAAATGQIFWNNYRHRLDEGCYEKLPEQEYPEDLSQDSISKSIIEHK 67

Query: 143 NNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQ 202
           + +   C +CGK YSTSSNLARHRQ HRS  D KAR CP C K+YVSMPAYSMH+RTHNQ
Sbjct: 68  STDIHTCPECGKRYSTSSNLARHRQTHRSLADKKARACPHCDKIYVSMPAYSMHVRTHNQ 127

Query: 203 ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
            C+C +C K FSRPWLLQGHIRTHTGEKPFKC VC+KAFADKSNLRAHIQTHS +KP VC
Sbjct: 128 GCKCSYCGKCFSRPWLLQGHIRTHTGEKPFKCTVCNKAFADKSNLRAHIQTHSNMKPHVC 187

Query: 263 EKCGKAFALKSYLYKHEDSSCLKS 286
            +CGKAFALKSYLYKHE+SSC+K+
Sbjct: 188 GRCGKAFALKSYLYKHEESSCMKT 211

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328785831|ref|XP_003250662.1| PREDICTED: zinc finger protein 615-like [Apis mellifera]

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 113/152 (74%), Positives = 130/152 (85%)

Query: 143 NNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQ 202
           +NE  +C DCGK YSTSSNLARHRQ HRS  D KAR CP C K+YVSMPA+SMH+RTHNQ
Sbjct: 215 DNEDHECPDCGKKYSTSSNLARHRQTHRSLGDKKARRCPHCDKVYVSMPAFSMHVRTHNQ 274

Query: 203 ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
            C+C +C K FSRPWLLQGHIRTHTGEKPFKC +C+KAFADKSNLRAHIQTHS  KP VC
Sbjct: 275 GCKCNYCGKCFSRPWLLQGHIRTHTGEKPFKCTICNKAFADKSNLRAHIQTHSNTKPHVC 334

Query: 263 EKCGKAFALKSYLYKHEDSSCLKSYDSSSSEK 294
            +CGKAFALKSYLYKHE+SSC++++  SS++K
Sbjct: 335 SRCGKAFALKSYLYKHEESSCMRAHHRSSTDK 366

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380018407|ref|XP_003693120.1| PREDICTED: zinc finger and SCAN domain-containing protein 5B-like [Apis florea]

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 113/152 (74%), Positives = 130/152 (85%)

Query: 143 NNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQ 202
           +NE  +C DCGK YSTSSNLARHRQ HRS  D KAR CP C K+YVSMPA+SMH+RTHNQ
Sbjct: 220 DNEDHECPDCGKKYSTSSNLARHRQTHRSLGDKKARRCPHCDKVYVSMPAFSMHVRTHNQ 279

Query: 203 ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
            C+C +C K FSRPWLLQGHIRTHTGEKPFKC +C+KAFADKSNLRAHIQTHS  KP VC
Sbjct: 280 GCKCNYCGKCFSRPWLLQGHIRTHTGEKPFKCTICNKAFADKSNLRAHIQTHSNTKPHVC 339

Query: 263 EKCGKAFALKSYLYKHEDSSCLKSYDSSSSEK 294
            +CGKAFALKSYLYKHE+SSC++++  SS++K
Sbjct: 340 SRCGKAFALKSYLYKHEESSCMRAHHRSSTDK 371

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853766|ref|XP_003702393.1| PREDICTED: uncharacterized protein LOC100883915 [Megachile rotundata]

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 114/152 (75%), Positives = 130/152 (85%)

Query: 143 NNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQ 202
           +NE  +C DCGK YSTSSNLARHRQ HRS  D KAR CP C K+YVSMPA+SMH+RTHNQ
Sbjct: 212 DNEDHECPDCGKKYSTSSNLARHRQTHRSLGDKKARRCPHCDKVYVSMPAFSMHVRTHNQ 271

Query: 203 ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
            C+C +C K FSRPWLLQGHIRTHTGEKPFKC +C+KAFADKSNLRAHIQTHS  KP VC
Sbjct: 272 GCKCHYCGKCFSRPWLLQGHIRTHTGEKPFKCTICNKAFADKSNLRAHIQTHSNTKPHVC 331

Query: 263 EKCGKAFALKSYLYKHEDSSCLKSYDSSSSEK 294
            +CGKAFALKSYLYKHE+SSC++++  SS+EK
Sbjct: 332 GRCGKAFALKSYLYKHEESSCMRAHHRSSTEK 363

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157103737|ref|XP_001648105.1| hypothetical protein AaeL_AAEL003978 [Aedes aegypti] gi|108880460|gb|EAT44685.1| AAEL003978-PA [Aedes aegypti]

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 111/137 (81%), Positives = 117/137 (85%)

Query: 149 CRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPH 208
           C +CGK YSTSSNLARHRQ HRS  D KAR CP C K+YVSMPAYSMH+RTHNQ CQCP 
Sbjct: 293 CPECGKKYSTSSNLARHRQTHRSLQDKKARRCPHCSKVYVSMPAYSMHVRTHNQGCQCPT 352

Query: 209 CSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKA 268
           C K FSRPWLLQGHIRTHTGEKPFKC VC KAFADKSNLRAH+QTHS  KP  C +CGKA
Sbjct: 353 CGKCFSRPWLLQGHIRTHTGEKPFKCSVCQKAFADKSNLRAHVQTHSNTKPHSCSRCGKA 412

Query: 269 FALKSYLYKHEDSSCLK 285
           FALKSYLYKHEDSSC+K
Sbjct: 413 FALKSYLYKHEDSSCMK 429

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	451
FB|FBgn0035144	442	CG17181 [Drosophila melanogast	0.292	0.298	0.795	1.4e-57
ZFIN|ZDB-GENE-120214-30	454	si:ch1073-127d16.1 "si:ch1073-	0.709	0.704	0.317	1.2e-51
ZFIN|ZDB-GENE-120214-29	518	si:ch73-367f21.5 "si:ch73-367f	0.658	0.573	0.347	1.5e-51
UNIPROTKB|Q15935	545	ZNF77 "Zinc finger protein 77"	0.678	0.561	0.337	1.5e-51
UNIPROTKB|F1N7M4	754	ZNF560 "Uncharacterized protei	0.674	0.403	0.346	1.9e-51
ZFIN|ZDB-GENE-110913-144	429	si:dkeyp-85d8.5 "si:dkeyp-85d8	0.651	0.685	0.36	5.1e-51
ZFIN|ZDB-GENE-110913-159	733	si:ch211-197f20.2 "si:ch211-19	0.651	0.401	0.366	6.5e-51
UNIPROTKB|Q8N972	641	ZNF709 "Zinc finger protein 70	0.651	0.458	0.347	8.3e-51
ZFIN|ZDB-GENE-110913-145	656	si:ch211-209n20.58 "si:ch211-2	0.685	0.471	0.357	8.3e-51
ZFIN|ZDB-GENE-050913-139	436	zgc:113381 "zgc:113381" [Danio	0.665	0.688	0.333	1.3e-50

FB|FBgn0035144 CG17181 [Drosophila melanogaster (taxid:7227)]

 Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
 Identities = 105/132 (79%), Positives = 112/132 (84%)

Query:   149 CRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPH 208
             C +CGK YSTSSNLARHRQ HRS  D KAR CP C K+YVSMPAYSMH+RTHNQ C+C  
Sbjct:   121 CPECGKKYSTSSNLARHRQTHRSIMDKKARHCPYCEKVYVSMPAYSMHVRTHNQGCECQF 180

Query:   209 CSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKA 268
             C K FSRPWLLQGHIRTHTGEKPFKC VC+KAFADKSNLRAHIQTHS  KP  C +CGKA
Sbjct:   181 CGKRFSRPWLLQGHIRTHTGEKPFKCGVCEKAFADKSNLRAHIQTHSNTKPHTCARCGKA 240

Query:   269 FALKSYLYKHED 280
             FALKSYLYKHE+
Sbjct:   241 FALKSYLYKHEE 252

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-120214-30 si:ch1073-127d16.1 "si:ch1073-127d16.1" [Danio rerio (taxid:7955)]

 Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
 Identities = 112/353 (31%), Positives = 171/353 (48%)

Query:   115 YFNQSNSFNRKS--VICNTKDVDTSTANNNNNESFQCRDCGKHYSTSSNLARHRQIHRSP 172
             YF +  S   ++  +    + +++   N++  ++F C +CGK ++    L  H +IH   
Sbjct:    20 YFTEQPSLKIQTGDIFTPIQSLESHKVNHSEKQTFICAECGKSFTLKRYLKNHMKIHTGA 79

Query:   173 DDTKARTCPQCGKLYVSMPAYSMHLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEK 230
                   TCP+C K +    +   HL+ H   +   CP C K F     L GH+R HTGEK
Sbjct:    80 HPF---TCPECDKCFTMKHSLETHLKIHTGEKPFTCPDCGKKFRLKQSLDGHLRIHTGEK 136

Query:   231 PFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXXXXX 290
             P+ C+VC ++F +K  L  H+  H+  KP+ C +CGK+F +K+ L  H            
Sbjct:   137 PYTCQVCGRSFREKQILDKHLTIHTGEKPYSCPECGKSFRVKNCLENH--------IKIH 188

Query:   291 XXEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH-------- 342
               EKP+ C+ C K+F +K NL  HI+ H+  KPF C +CG++F +K  L  H        
Sbjct:   189 TGEKPYTCQECGKSFTEKQNLERHIRIHTGEKPFACPECGRSFRVKQDLKIHLRIHTGEK 248

Query:   343 ----EDXXXXXXXXXXXNGHLNKFTTIS-FQCRDCGKHYSTSSNLARHRQIHRSPDDTKA 397
                 +              H+   T    F C  CGK++    NL  H ++H      + 
Sbjct:   249 PFSCQQCGKSFSENKKLENHMRIHTGEKPFVCSHCGKNFRGKQNLESHMRLHTG---NQP 305

Query:   398 RTCPQCGKLYVSMPAYSMHLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTG 448
              TCPQCGK Y    +  +H+RTH   +   C  C KSF++   L+GHI+ HTG
Sbjct:   306 YTCPQCGKSYNQQKSLQIHIRTHTGEKPFACDQCGKSFTQQSTLKGHIKIHTG 358

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-120214-29 si:ch73-367f21.5 "si:ch73-367f21.5" [Danio rerio (taxid:7955)]

 Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
 Identities = 114/328 (34%), Positives = 165/328 (50%)

Query:   138 TANNNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHL 197
             T  +N  ++F C +CGK ++    L  H +IH S D     TCP+C K +    +   HL
Sbjct:    53 TMIHNGEQTFICSECGKSFTQMRYLKNHMKIH-SGDHPF--TCPECDKCFTVKQSLETHL 109

Query:   198 RTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHS 255
             + H   +   CP+C K+F     L+GH+R HTGEKP+ C+VC K+F +K +L  H+  H+
Sbjct:   110 KIHTGEKPFICPYCGKNFRIKHSLEGHMRIHTGEKPYPCQVCGKSFREKQSLEKHLTIHT 169

Query:   256 KVKPFVCEKCGKAFALKSYLYKHEDXXXXXXXXXXXXEKPFKCKVCDKAFADKSNLRAHI 315
               KP+ C +CGK+F +K+ L  H              EKP+ C+ C K+F +K NL+ H+
Sbjct:   170 GEKPYSCPECGKSFRVKNCLENH--------IKIHTGEKPYTCQECGKSFTEKQNLKRHM 221

Query:   316 QTHSKVKPFVCEKCGKAFA----LKSYLYKH--------EDXXXXXXXXXXXNGHLNKFT 363
             + H+  KPF C  CGK+F     LK ++  H        +              H+   T
Sbjct:   222 RIHTGEKPFTCSHCGKSFRVSKDLKIHVRIHTGEKPFSCQQCGKSFSENKKLTSHMRIHT 281

Query:   364 TIS-FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHN- 421
                 F C  CGK +    NL  H ++H      K  TCPQCGK Y    +   H+R+H  
Sbjct:   282 GEKPFVCSHCGKRFRGKQNLESHIRLHTGE---KRYTCPQCGKSYNEQKSLENHIRSHTG 338

Query:   422 -QICQCPHCSKSFSRPWLLQGHIRTHTG 448
              +   C  C KSF +  +L+GHIR HTG
Sbjct:   339 EKPFACDQCGKSFRQQRILKGHIRIHTG 366

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q15935 ZNF77 "Zinc finger protein 77" [Homo sapiens (taxid:9606)]

 Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
 Identities = 115/341 (33%), Positives = 175/341 (51%)

Query:   129 CNTKDVDTSTANN----NNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCG 184
             CN +D  T++       ++ +S++C+ CGK +   S+   H   H      K   C  CG
Sbjct:   190 CNCQDSRTASVTYVKSLSSKKSYECQKCGKAFICPSSFRGHVNSHHGQ---KTHACKVCG 246

Query:   185 KLYVSMPAYSMHLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFA 242
             K ++     + H+RTH   +  +C  C K+FS P   + H+RTHTGEKP++CK C K+F+
Sbjct:   247 KTFMYYSYLTRHVRTHTGEKPYECKECGKAFSCPSYFREHVRTHTGEKPYECKHCGKSFS 306

Query:   243 DKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXXXXXXXEKPFKCKVCD 302
               S+ R H++TH+  KP  C+ CGKAF   S L +H              EKP++CK C 
Sbjct:   307 CYSSFRDHVRTHTGEKPCQCKHCGKAFTCYSSLREH--------GRTHSGEKPYECKECG 358

Query:   303 KAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH------------EDXXXXXX 350
             KAF   S+LRAH++ H+  KP+VC++CGKAF   +Y  +H            ++      
Sbjct:   359 KAFRYPSSLRAHMRMHTGEKPYVCKQCGKAFGCPTYFRRHVKTHSGVKPYQCKECGKAYS 418

Query:   351 XXXXXNGHLNKFTTIS-FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVS 409
                    H+   T    F+C+ CGK +S  S+L  H + H      K   C QCGK +  
Sbjct:   419 FSSSLRIHVRTHTGEKPFECKHCGKAFSCHSSLREHVRTHSGE---KPYECNQCGKAFSH 475

Query:   410 MPAYSMHLRTHNQI--CQCPHCSKSFSRPWLLQGHIRTHTG 448
                +  H+R+H+ +   +C  C K++S    L+ H+RTHTG
Sbjct:   476 AQYFQKHVRSHSGVKPYECTECGKAYSCSSSLRVHVRTHTG 516

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|F1N7M4 ZNF560 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 116/335 (34%), Positives = 160/335 (47%)

Query:   131 TKDVDTSTANNNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSM 190
             + D+   T  +   + ++C++CGK + +SS+L  H QIH      K   C +CGK +   
Sbjct:   372 SSDLTGHTKTHTGEQLYKCKECGKAFGSSSHLRVHSQIHTG---IKIYKCQECGKTFTGS 428

Query:   191 PAYSMHLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLR 248
                  H+ TH   +  +C  C K+F++   L  H++ HTGEKP KC +C   F   S L 
Sbjct:   429 SRLIEHMNTHTGEKPFKCDTCGKTFTQSSCLTKHMKIHTGEKPLKCDICGTTFTQTSYLT 488

Query:   249 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXXXXXXXEKPFKCKVCDKAFADK 308
              H++TH+  KPF C+KCGKAFA  SYL  H              EKPFKC  C K F   
Sbjct:   489 QHMRTHTGEKPFKCDKCGKAFAAYSYLSNH--------FRTHTGEKPFKCDTCGKTFVQS 540

Query:   309 SNLRAHIQTHSKVKPFVCEKCGKAFALKSYL------------YKHEDXXXXXXXXXXXN 356
             S L  H +TH+  KPF C+ CGK F+  SYL            YK +             
Sbjct:   541 SGLSQHKKTHTGEKPFKCDTCGKTFSQSSYLSRHMRTHTGEKPYKCDTCGKGFGFSSILR 600

Query:   357 GHLNKFT-TISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSM 415
              HL   T   + +C  CGK ++ +S L +H + H      K   C +CGK +      + 
Sbjct:   601 RHLQSHTGEKTAKCEKCGKTFTRASGLTQHMKTHTGEKPYK---CDKCGKAFADSSCLTK 657

Query:   416 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTG 448
             H RTH   +  +C  C KSF+    L  H RTHTG
Sbjct:   658 HFRTHTGEKPFKCDKCGKSFAVSSRLTKHFRTHTG 692

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-144 si:dkeyp-85d8.5 "si:dkeyp-85d8.5" [Danio rerio (taxid:7955)]

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 117/325 (36%), Positives = 162/325 (49%)

Query:   141 NNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH 200
             +   + F C  CGK +S SS+L RH +IH      K  TC  CGK +      ++H+R H
Sbjct:   116 HTGEKPFTCTQCGKSFSKSSSLYRHMKIHTGE---KPLTCTHCGKSFNHSSFLNLHMRIH 172

Query:   201 N--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVK 258
                +   CP C KSFS+   L  H++ HTGEKPF C  C K+F D S L+ HI+ H+  K
Sbjct:   173 TGEKPLTCPQCGKSFSKSSSLYKHMKIHTGEKPFTCTQCGKSFYDSSYLKKHIRIHTGEK 232

Query:   259 PFVCEKCGKAFALKSYLYKHEDXXXXXXXXXXXXEKPFKCKVCDKAFADKSNLRAHIQTH 318
             PF C +CGK+F   S+L KH              EKPF C  C K+F+  S+L  H++ H
Sbjct:   233 PFTCAQCGKSFNCSSHLKKH--------MMIHTGEKPFTCTQCGKSFSKSSSLYRHMRIH 284

Query:   319 SKVKPFVCEKCGKAFALKSYLYKH------------EDXXXXXXXXXXXNGHLNKFTTIS 366
             +  KPF C +CGK+F+  S L +H                         N H+   T   
Sbjct:   285 TGEKPFTCTQCGKSFSHSSSLNQHIMIHTGEKPFTCPQCGKSFIHSSNLNLHMRIHTGEK 344

Query:   367 -FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH--NQI 423
              F C  CGK +STSS+L +H +IH      +   C +C K +++      H R H  ++ 
Sbjct:   345 PFTCSQCGKSFSTSSHLKQHMKIHTG---VREYMCLECEKTFITAADLKRHQRIHTGDKP 401

Query:   424 CQCPHCSKSFSRPWLLQGHIRTHTG 448
              +C HCSK F+R   L+ H R H G
Sbjct:   402 YKCSHCSKRFTRSETLKTHERIHAG 426

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-159 si:ch211-197f20.2 "si:ch211-197f20.2" [Danio rerio (taxid:7955)]

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 119/325 (36%), Positives = 156/325 (48%)

Query:   141 NNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH 200
             +   + F C  CGK +S  S+L RH  IH      K  TC QCGK +  +     H+  H
Sbjct:   395 HTGEKPFTCTQCGKSFSRLSHLNRHMMIHTGE---KPFTCTQCGKSFSRLSHLIRHMMIH 451

Query:   201 N--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVK 258
                +   C  C KSFS    L  H+R HTGEKPF C  C K+F   SNL  H+  H++ K
Sbjct:   452 TGEKPFTCSQCRKSFSNLSSLYRHMRIHTGEKPFTCTQCGKSFRQSSNLNLHMMIHTEEK 511

Query:   259 PFVCEKCGKAFALKSYLYKHEDXXXXXXXXXXXXEKPFKCKVCDKAFADKSNLRAHIQTH 318
             PF C +CGK+F+  S+L +H              EKPFKC  C K+F   S+L  H+  H
Sbjct:   512 PFKCTQCGKSFSQSSHLNQH--------IMIHTGEKPFKCTQCGKSFIQSSSLNQHMMIH 563

Query:   319 SKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX--------XXXXXNGHLNKFTTIS---- 366
             +  KPF C KCGK+F   S L +H                     +  LNK   I     
Sbjct:   564 TGEKPFTCPKCGKSFRKSSSLNEHRMIHTGEKPFTCPKCEMSFSQSSSLNKHMRIHTGEK 623

Query:   367 -FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHN--QI 423
              F C  CGK ++ +S+L  H +IH      K  TCP+CGK +      + H+R H   + 
Sbjct:   624 PFTCTQCGKSFNQTSSLKDHMRIHTGE---KPFTCPKCGKSFNQSSHLNHHMRIHTGEKP 680

Query:   424 CQCPHCSKSFSRPWLLQGHIRTHTG 448
               C  C KSFSRP  L  H++ HTG
Sbjct:   681 FTCTQCGKSFSRPSSLNKHMKIHTG 705

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|Q8N972 ZNF709 "Zinc finger protein 709" [Homo sapiens (taxid:9606)]

 Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
 Identities = 113/325 (34%), Positives = 167/325 (51%)

Query:   141 NNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH 200
             +   + ++C+ CGK +S  S+  +H +IH      K   C +CGK ++S+P+Y  H+  H
Sbjct:   302 HTGEKPYKCKKCGKAFSFPSSFRKHERIHTGE---KPYDCKECGKAFISLPSYRRHMIMH 358

Query:   201 --NQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVK 258
               N   +C  C K+F  P   Q H RTHTGEKP++CK C KAF+  S+ R H +TH+  K
Sbjct:   359 TGNGPYKCKECGKAFDCPSSFQIHERTHTGEKPYECKQCGKAFSCSSSFRMHERTHTGEK 418

Query:   259 PFVCEKCGKAFALKSYLYKHEDXXXXXXXXXXXXEKPFKCKVCDKAFADKSNLRAHIQTH 318
             P  C++CGKAF+  S +  HE             EKP++CK C KAF+  S+ R H + H
Sbjct:   419 PHECKQCGKAFSCSSSVRIHE--------RTHTGEKPYECKQCGKAFSCSSSFRMHERIH 470

Query:   319 SKVKPFVCEKCGKAFALKSYLYKHEDXXXXX----------XXXXXXNGHLNKFTTIS-- 366
             +  KP+ C++CGKAF+  S    HE                      +  +++ T     
Sbjct:   471 TGEKPYECKQCGKAFSFSSSFRMHERTHTGEKPYECKQCGKAFSCSSSFRMHERTHTGEK 530

Query:   367 -FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI-- 423
              ++C+ CGK +S SS++  H + H      K   C QCGK +    +  MH RTH  +  
Sbjct:   531 PYECKQCGKAFSCSSSIRIHERTHTGE---KPYECKQCGKAFSCSSSVRMHERTHTGVKP 587

Query:   424 CQCPHCSKSFSRPWLLQGHIRTHTG 448
              +C  C K+FS     + H RTHTG
Sbjct:   588 YECKQCDKAFSCSRSFRIHERTHTG 612

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-110913-145 si:ch211-209n20.58 "si:ch211-209n20.58" [Danio rerio (taxid:7955)]

 Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
 Identities = 122/341 (35%), Positives = 168/341 (49%)

Query:   125 KSVICNTKDVDTSTANNNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCG 184
             KS+   +K + T    +   + F C  CGK +S SS+L RH +IH         TC  CG
Sbjct:    73 KSLASKSK-LKTHMRIHTGEKPFTCTQCGKSFSKSSSLYRHMKIHTGEIPL---TCTHCG 128

Query:   185 KLYVSMPAYSMHLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFA 242
             K +      ++H+R H   +   CP C KSFS+   L  H++ HTGEKPF C  C K+F 
Sbjct:   129 KSFNHSSFLNLHMRIHTGEKPLTCPQCGKSFSKSSSLYKHMKIHTGEKPFTCTQCGKSFY 188

Query:   243 DKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXXXXXXXEKPFKCKVCD 302
             D S L+ H++ H+  KPF C +CGK+F   S+L KH              EKPF C  C 
Sbjct:   189 DSSYLKKHMRIHTGEKPFTCAQCGKSFNCSSHLKKH--------MMIHTGEKPFTCTQCG 240

Query:   303 KAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH------------EDXXXXXX 350
             K+F+  S+L  H++ H+  KPF C +CGK+F+  S L +H                    
Sbjct:   241 KSFSKSSSLYRHMRIHTGEKPFTCTQCGKSFSHSSSLNQHMMIHTGEKPFTCPQCGKSFI 300

Query:   351 XXXXXNGHLNKFTTIS-FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVS 409
                  N H+   T    F C  CGK +STSS+L +H +IH      K  TC QCGK +  
Sbjct:   301 HSSNLNLHMRIHTGEKPFTCSQCGKSFSTSSHLKQHMKIHTGE---KPFTCTQCGKSFSK 357

Query:   410 MPAYSMHLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTG 448
               +   H++ H   +   C  C KSFS+   L  H+R HTG
Sbjct:   358 SSSLYRHMKIHTGEKPFICTLCGKSFSQSSSLNLHMRIHTG 398

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-050913-139 zgc:113381 "zgc:113381" [Danio rerio (taxid:7955)]

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 110/330 (33%), Positives = 162/330 (49%)

Query:   135 DTSTANNNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYS 194
             +TS       +SF C  CGKH+S   +L  H  IH   +     TC QCGK + +   + 
Sbjct:    66 NTSCERAEKTKSFPCHQCGKHFSRKQSLKVHMGIHTGEN---LSTCDQCGKSFNTKSGFD 122

Query:   195 MHLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQ 252
              H++TH+  +   C  C +SF + + L+ H+  HTGEKPF C+ C+K F    NL+AH +
Sbjct:   123 KHMKTHSGEKPFWCTECGRSFCKKYTLEMHMAVHTGEKPFACEHCEKKFRQMGNLKAHYR 182

Query:   253 THSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXXXXXXXEKPFKCKVCDKAFADKSNLR 312
              H+  KP+ C++CGK+F  K+ L  H              EKPF C  C K++A K +L 
Sbjct:   183 VHTGEKPYTCQQCGKSFTKKTTLRSH--------IISHSGEKPFTCDQCGKSYACKDHLD 234

Query:   313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH-----------EDXXXXXXXXXXXNGHLNK 361
              H++ H+K K F+C++CG +F LK    +H           E              H+  
Sbjct:   235 RHMRIHTKDKYFICDQCGSSFKLKENFDQHMKNHAEKSLICEQCGRSFFCEATYEKHMRV 294

Query:   362 FTTIS-FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH 420
              T    + C +CGK +S   NL  H +IH      K   C  C K +  +PA  +H+R H
Sbjct:   295 HTGEKPYSCTECGKSFSQKENLTSHMRIHTGE---KPFACEYCEKRFSQLPALKVHMRVH 351

Query:   421 N--QICQCPHCSKSFSRPWLLQGHIRTHTG 448
                +   C  C K F++   L+ H+RTHTG
Sbjct:   352 TGEKPYTCAQCGKGFAQKNGLKIHMRTHTG 381

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	451
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	5e-05
COG0068	750	COG0068, HypF, Hydrogenase maturation factor [Post	3e-04
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.001
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.001
TIGR00143	711	TIGR00143, hypF, [NiFe] hydrogenase maturation pro	0.001

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 39.7 bits (93), Expect = 5e-05
 Identities = 16/24 (66%), Positives = 21/24 (87%)

Query: 219 LQGHIRTHTGEKPFKCKVCDKAFA 242
           L+ H+RTHTGEKP+KC VC K+F+
Sbjct: 2   LRRHMRTHTGEKPYKCPVCGKSFS 25

Length = 26

>gnl|CDD|223146 COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]

 Score = 42.8 bits (101), Expect = 3e-04
 Identities = 29/107 (27%), Positives = 40/107 (37%), Gaps = 26/107 (24%)

Query: 234 CKVCDKAFADKSNLRAHIQTHSKVKPF-VCEKCGKAFA-LKSYLYKHEDSSCLKSYDSSS 291
           C+ C +   D ++ R          PF  C  CG  F  +++  Y  E++S         
Sbjct: 104 CEDCLEEIFDPNSRRYLY-------PFINCTNCGPRFTIIEALPYDRENTSM-------- 148

Query: 292 SEKPFK-CKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKS 337
               F  C  CDK + D  N R H Q      P  C KCG    L +
Sbjct: 149 --ADFPLCPFCDKEYKDPLNRRFHAQ------PIACPKCGPHLFLVN 187

Length = 750

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 35.8 bits (83), Expect = 0.001
 Identities = 13/25 (52%), Positives = 19/25 (76%)

Query: 246 NLRAHIQTHSKVKPFVCEKCGKAFA 270
           NLR H++TH+  KP+ C  CGK+F+
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFS 25

Length = 26

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 35.8 bits (83), Expect = 0.001
 Identities = 13/25 (52%), Positives = 19/25 (76%)

Query: 310 NLRAHIQTHSKVKPFVCEKCGKAFA 334
           NLR H++TH+  KP+ C  CGK+F+
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFS 25

Length = 26

>gnl|CDD|232844 TIGR00143, hypF, [NiFe] hydrogenase maturation protein HypF

 Score = 41.3 bits (97), Expect = 0.001
 Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 26/107 (24%)

Query: 234 CKVCDKAFADKSNLRAHIQTHSKVKPFV-CEKCGKAFAL-KSYLYKHEDSSCLKSYDSSS 291
           C  C +   DK++ R          PF+ C  CG  F + ++  Y  E++S         
Sbjct: 71  CSDCLEEMLDKNDRRYLY-------PFISCTHCGPRFTIIEALPYDRENTSM-------- 115

Query: 292 SEKPFK-CKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKS 337
               F  C  C K + D  + R H Q      P  C +CG      S
Sbjct: 116 --ADFPLCPDCAKEYKDPLDRRFHAQ------PIACPRCGPQLNFVS 154

A previously described regulatory effect of HypF mutatation is attributable to loss of activity of a regulatory hydrogenase. A zinc finger-like region CXXCX(18)CXXCX(24)CXXCX(18)CXXC region further supported the regulatory hypothesis. However, more recent work (PUBMED:11375153) shows the direct effect is on the activity of expressed hydrogenases with nickel/iron centers, rather than on expression [Protein fate, Protein modification and repair]. Length = 711

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	451
KOG1074|consensus	958		99.97
KOG2462|consensus	279		99.96
KOG1074|consensus	958		99.96
KOG3608|consensus	467		99.95
KOG3608|consensus	467		99.95
KOG2462|consensus	279		99.94
KOG3623|consensus	1007		99.9
KOG3623|consensus	1007		99.89
KOG3576|consensus	267		99.65
KOG3576|consensus	267		99.65
PLN03086	567	PRLI-interacting factor K; Provisional	99.26
PLN03086	567	PRLI-interacting factor K; Provisional	99.25
PHA00733	128	hypothetical protein	99.23
PHA00733	128	hypothetical protein	99.09
PHA02768	55	hypothetical protein; Provisional	98.96
KOG3993|consensus	500		98.89
KOG3993|consensus	500		98.84
PHA02768	55	hypothetical protein; Provisional	98.83
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.65
PHA00732	79	hypothetical protein	98.54
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.45
PHA00732	79	hypothetical protein	98.33
PHA00616	44	hypothetical protein	98.33
PHA00616	44	hypothetical protein	98.29
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.19
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.18
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.93
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.86
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.86
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.71
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.61
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.59
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.44
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.4
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.35
KOG2231|consensus	669		97.23
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.19
KOG1146|consensus	1406		97.16
KOG2231|consensus	669		97.14
KOG1146|consensus	1406		97.06
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.02
smart00355	26	ZnF_C2H2 zinc finger.	96.98
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.89
smart00355	26	ZnF_C2H2 zinc finger.	96.79
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.7
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.67
KOG2785|consensus	390		96.63
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.55
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.54
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.5
PRK04860	160	hypothetical protein; Provisional	96.21
KOG2785|consensus	390		96.17
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.1
KOG2482|consensus	423		95.95
PRK04860	160	hypothetical protein; Provisional	95.76
KOG2482|consensus	423		95.7
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.69
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.31
COG5048	467	FOG: Zn-finger [General function prediction only]	93.81
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.79
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.74
COG5048	467	FOG: Zn-finger [General function prediction only]	93.28
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.65
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	92.56
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.08
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	91.83
KOG2893|consensus	341		91.39
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	89.95
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	89.94
KOG2893|consensus	341		89.89
KOG4173|consensus	253		89.05
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	87.96
KOG4173|consensus	253		86.61
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	84.39
COG4049	65	Uncharacterized protein containing archaeal-type C	83.87
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	82.51
COG4049	65	Uncharacterized protein containing archaeal-type C	82.32
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	82.09
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	81.95
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	80.89
smart00531	147	TFIIE Transcription initiation factor IIE.	80.57

>KOG1074|consensus

Probab=99.97  E-value=1.3e-31  Score=258.28  Aligned_cols=54  Identities=31%  Similarity=0.552  Sum_probs=50.7

Q ss_pred             cccCccccccCChHHHHHHHHHcCCc--cccccccccCCChhhHHHHHhhhcCCCC
Q psy18077        398 RTCPQCGKLYVSMPAYSMHLRTHNQI--CQCPHCSKSFSRPWLLQGHIRTHTGGTN  451 (451)
Q Consensus       398 ~~C~~C~~~f~~~~~l~~H~~~H~~~--~~C~~C~~~f~~~~~l~~H~~~h~~~~~  451 (451)
                      ..|..|++.|.+...|..|+|+|+++  |.|.+|++.|..+..|+.||.+|....|
T Consensus       880 h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~  935 (958)
T KOG1074|consen  880 HVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQP  935 (958)
T ss_pred             hhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCC
Confidence            78999999999999999999999876  9999999999999999999999987653

>KOG2462|consensus

Probab=99.96  E-value=2e-30  Score=221.66  Aligned_cols=145  Identities=66%  Similarity=1.180  Sum_probs=138.0

Q ss_pred             CCCccccccccccccCChHhHHHHHhhhcCCCCCCCcccccccccccCHHHHHHHHHHcCCCcccCcCccccCCHHHHHH
Q psy18077        142 NNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQG  221 (451)
Q Consensus       142 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~C~~C~~~f~~~~~L~~  221 (451)
                      .....|+|..||+.|.+..+|.+|.+.|..-+..+.+.|+.|++.|.+...|..|+++|.-++.|.+||+.|.+++.|+-
T Consensus       126 ~~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWLLQG  205 (279)
T KOG2462|consen  126 AKHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPWLLQG  205 (279)
T ss_pred             ccCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccCCCcccccccccccchHHhhc
Confidence            34567999999999999999999999999888889999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchhhcCCCC
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKS  286 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  286 (451)
                      |+|+|+||+||.|+.|+++|..+++|+.||++|.+.++|+|..|++.|..++.|.+|...-|.+.
T Consensus       206 HiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~C~~~  270 (279)
T KOG2462|consen  206 HIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESACLKY  270 (279)
T ss_pred             ccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhccccc
Confidence            99999999999999999999999999999999999999999999999999999999988765543

>KOG1074|consensus

Probab=99.96  E-value=1.6e-30  Score=250.92  Aligned_cols=214  Identities=29%  Similarity=0.502  Sum_probs=152.2

Q ss_pred             cCcCccccCCHHHHHHHHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCC----CCeecc---cccccccChHHHHhc
Q psy18077        206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKV----KPFVCE---KCGKAFALKSYLYKH  278 (451)
Q Consensus       206 C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~---~C~~~f~~~~~l~~H  278 (451)
                      |-+|-++..-+..|+.|.++|+|++||+|.+||+.|.++.+|+.||-.|...    .++.|+   +|.+.|.....|..|
T Consensus       608 CiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lpQh  687 (958)
T KOG1074|consen  608 CIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLPQH  687 (958)
T ss_pred             eeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccccce
Confidence            8888888888888888888888888888888888888888888888877543    347788   888888888888888


Q ss_pred             hhhcCCCCcCCC-----CCCcCeeccccccccCChHHHHHHHHHhc----------------CCC----ceecccCcccc
Q psy18077        279 EDSSCLKSYDSS-----SSEKPFKCKVCDKAFADKSNLRAHIQTHS----------------KVK----PFVCEKCGKAF  333 (451)
Q Consensus       279 ~~~~~~~~~~~~-----~~~~~~~C~~C~~~f~~~~~l~~H~~~h~----------------~~~----~~~C~~C~~~f  333 (451)
                      +++|.+......     ...-.-+|..|.+.|.....+..++..|.                .+.    +..+..|+..+
T Consensus       688 IriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~~~~  767 (958)
T KOG1074|consen  688 IRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCGREL  767 (958)
T ss_pred             EEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCcccccccccc
Confidence            888764332211     11122468888888877777777776552                112    46677787777


Q ss_pred             cChhhHHhcccc------------------------cCCCcc-----C-----CCCC--------------c-------c
Q psy18077        334 ALKSYLYKHEDS------------------------SCLKSY-----D-----SSSN--------------G-------H  358 (451)
Q Consensus       334 ~~~~~L~~H~~~------------------------~~~~~~-----~-----~~~~--------------~-------~  358 (451)
                      .....+..+-..                        .-++.+     .     ...+              .       .
T Consensus       768 ~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t~~n~  847 (958)
T KOG1074|consen  768 EGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLATKTNE  847 (958)
T ss_pred             CcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccccccccccccc
Confidence            766555444320                        000000     0     0000              0       0


Q ss_pred             cC----------------------ccc--ccccccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHH
Q psy18077        359 LN----------------------KFT--TISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYS  414 (451)
Q Consensus       359 ~~----------------------~~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~  414 (451)
                      +.                      ...  .....|..|++.|...++|..|+++|++   +|||.|.+|++.|..+..|+
T Consensus       848 ~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg---~KPF~C~fC~~aFttrgnLK  924 (958)
T KOG1074|consen  848 ITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTG---PKPFFCHFCEEAFTTRGNLK  924 (958)
T ss_pred             ccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCC---CCCccchhhhhhhhhhhhhh
Confidence            00                      000  0048899999999999999999999997   99999999999999999999


Q ss_pred             HHHHHcCC
Q psy18077        415 MHLRTHNQ  422 (451)
Q Consensus       415 ~H~~~H~~  422 (451)
                      .||.+|..
T Consensus       925 vHMgtH~w  932 (958)
T KOG1074|consen  925 VHMGTHMW  932 (958)
T ss_pred             hhhccccc
Confidence            99999964

>KOG3608|consensus

Probab=99.95  E-value=2.6e-28  Score=213.49  Aligned_cols=217  Identities=27%  Similarity=0.527  Sum_probs=139.1

Q ss_pred             cCcCccccCCHHHHHHHHHHhcC------------CCC-cccc--cchhhcCChHhHHHHHHHcCCCCCeeccccccccc
Q psy18077        206 CPHCSKSFSRPWLLQGHIRTHTG------------EKP-FKCK--VCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFA  270 (451)
Q Consensus       206 C~~C~~~f~~~~~L~~H~~~h~~------------~~~-~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  270 (451)
                      ...|+..|.+...|..|+..|.-            ++| +.|.  .|.+.|.++..|+.|++.|.+++...|+.||..|.
T Consensus       139 WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~  218 (467)
T KOG3608|consen  139 WEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFR  218 (467)
T ss_pred             hhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhc
Confidence            34566666666666666554421            111 3343  36677777777777777777777777777777777


Q ss_pred             ChHHHHhchhhcCCCCcCCCCCCcCeeccccccccCChHHHHHHHHHhcCCCceecccCcccccChhhHHhcccccCCCc
Q psy18077        271 LKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKS  350 (451)
Q Consensus       271 ~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~  350 (451)
                      ++..|..|.+..      +.....+|.|..|.+.|.+...|+.|+..|-  .-|+|++|+.+....+.|..|++.     
T Consensus       219 ~~tkl~DH~rRq------t~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~-----  285 (467)
T KOG3608|consen  219 TKTKLFDHLRRQ------TELNTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRY-----  285 (467)
T ss_pred             cccHHHHHHHhh------hhhcCCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHh-----
Confidence            777777776543      1133446777777777777777777777663  357777777777777777777652     


Q ss_pred             cCCCCCcccCcccccccccccccccCCChHHHHHHHHhccCCCCCCCcccCc--cccccCChHHHHHHHHHcC-Cc----
Q psy18077        351 YDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQ--CGKLYVSMPAYSMHLRTHN-QI----  423 (451)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~-~~----  423 (451)
                               +....+||+|..|++.|.+.+.|.+|+.+|.    +..|+|..  |.++|.+..+|++|++.++ +.    
T Consensus       286 ---------rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS----~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~  352 (467)
T KOG3608|consen  286 ---------RHSKDKPFKCDECDTRCVRESDLAKHVQVHS----KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPIL  352 (467)
T ss_pred             ---------hhccCCCccccchhhhhccHHHHHHHHHhcc----ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCc
Confidence                     2223446777777777777777777777665    45677766  7777777777777776554 21    


Q ss_pred             cccccccccCCChhhHHHHHhhhcC
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRTHTG  448 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~h~~  448 (451)
                      |+|..|++.|++-.+|..|++..||
T Consensus       353 Y~CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  353 YACHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             eeeecchhhhccchhHHHHHHHhhc
Confidence            7777777777777777777655443

>KOG3608|consensus

Probab=99.95  E-value=6.2e-28  Score=211.08  Aligned_cols=264  Identities=28%  Similarity=0.528  Sum_probs=221.4

Q ss_pred             cccccc--cccccCC-hHhHHHHHhhhc-------------------C------------CCCCCCccc--ccccccccC
Q psy18077        146 SFQCRD--CGKHYST-SSNLARHRQIHR-------------------S------------PDDTKARTC--PQCGKLYVS  189 (451)
Q Consensus       146 ~~~C~~--C~~~f~~-~~~l~~H~~~h~-------------------~------------~~~~~~~~C--~~C~~~f~~  189 (451)
                      .++|..  |++...+ ...|.+|.-.|.                   +            |.....|.|  ..|+..|.+
T Consensus        69 e~qC~w~~C~f~~~~~s~~l~RHvy~H~y~~~l~q~G~~al~~~~dig~c~~~f~~~~~ip~~g~~f~C~WedCe~~F~s  148 (467)
T KOG3608|consen   69 EHQCTWNSCDFRTENSSADLIRHVYFHCYHTKLKQQGKLALDLHPDIGACTAPFRLMEKIPALGQNFRCGWEDCEREFVS  148 (467)
T ss_pred             ceeEEeccCCccccchHHHHHhhhhhhhhHHHHHHHHHHHHhcCCCcCcccCCcchhhccccchhhhccChhhcCCcccC
Confidence            567754  8887766 588999976551                   0            011223455  679999999


Q ss_pred             HHHHHHHHHHcCC-----------------CcccCcCccccCCHHHHHHHHHHhcCCCCcccccchhhcCChHhHHHHHH
Q psy18077        190 MPAYSMHLRTHNQ-----------------ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQ  252 (451)
Q Consensus       190 ~~~l~~H~~~h~~-----------------~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  252 (451)
                      ...|..|...|.-                 ++....|.+.|.++..|++|++.|++++...|+.||..|.++..|..|++
T Consensus       149 ~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~r  228 (467)
T KOG3608|consen  149 IVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLR  228 (467)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHH
Confidence            9999999877632                 34466799999999999999999999999999999999999999999987


Q ss_pred             Hc--CCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccCChHHHHHHHHH-hcCCCceecccC
Q psy18077        253 TH--SKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQT-HSKVKPFVCEKC  329 (451)
Q Consensus       253 ~h--~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C  329 (451)
                      .-  ....+|+|..|.+.|.+...|..|+..|          -.-|+|+.|+.+....+.|..|++. |...+||+|+.|
T Consensus       229 Rqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rH----------vn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~C  298 (467)
T KOG3608|consen  229 RQTELNTNSFQCAQCFKRFATEKLLKSHVVRH----------VNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDEC  298 (467)
T ss_pred             hhhhhcCCchHHHHHHHHHhHHHHHHHHHHHh----------hhcccccccccCCCChHHHHHHHHhhhccCCCccccch
Confidence            64  3456899999999999999999999877          4579999999999999999999986 888999999999


Q ss_pred             cccccChhhHHhcccccCCCccCCCCCcccCccccccccccc--ccccCCChHHHHHHHHhccCCCCCCCcccCcccccc
Q psy18077        330 GKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRD--CGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLY  407 (451)
Q Consensus       330 ~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f  407 (451)
                      ++.|.+.+.|.+|.                ..|....|+|..  |..+|.+...|++|++.++.+.++-+|.|-.|++.|
T Consensus       299 d~~c~~esdL~kH~----------------~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~f  362 (467)
T KOG3608|consen  299 DTRCVRESDLAKHV----------------QVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFF  362 (467)
T ss_pred             hhhhccHHHHHHHH----------------HhccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhh
Confidence            99999999999995                345566899988  999999999999999999976778899999999999


Q ss_pred             CChHHHHHHHHHcCCc--------cccccccccCCC
Q psy18077        408 VSMPAYSMHLRTHNQI--------CQCPHCSKSFSR  435 (451)
Q Consensus       408 ~~~~~l~~H~~~H~~~--------~~C~~C~~~f~~  435 (451)
                      ++-.+|..|++.-++-        |.=..|.-+|.+
T Consensus       363 t~G~~L~~HL~kkH~f~~PsGh~RFtYk~~edG~mR  398 (467)
T KOG3608|consen  363 TSGKSLSAHLMKKHGFRLPSGHKRFTYKVDEDGFMR  398 (467)
T ss_pred             ccchhHHHHHHHhhcccCCCCCCceeeeeccCceee
Confidence            9999999998765431        444555555543

>KOG2462|consensus

Probab=99.94  E-value=7.6e-28  Score=205.83  Aligned_cols=136  Identities=51%  Similarity=0.929  Sum_probs=109.8

Q ss_pred             ccCcCccccCCHHHHHHHHHHhcC---CCCcccccchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchhh
Q psy18077        205 QCPHCSKSFSRPWLLQGHIRTHTG---EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDS  281 (451)
Q Consensus       205 ~C~~C~~~f~~~~~L~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  281 (451)
                      +|+.||+.+.+...|.+|..+|..   .+.+.|.+|++.|.+...|+.|+++|.  .++.|.+||+.|...+-|+-|++.
T Consensus       132 ~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRT  209 (279)
T KOG2462|consen  132 KCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRT  209 (279)
T ss_pred             eccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhccccc
Confidence            344444444444444444444432   455788888888888888888888886  678889999999999999999887


Q ss_pred             cCCCCcCCCCCCcCeeccccccccCChHHHHHHHHHhcCCCceecccCcccccChhhHHhcccccCCCc
Q psy18077        282 SCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKS  350 (451)
Q Consensus       282 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~  350 (451)
                      |        +|||||.|..|++.|.++++|+.||++|.+.|+|+|..|+|.|..++.|.+|..+-|.+.
T Consensus       210 H--------TGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~C~~~  270 (279)
T KOG2462|consen  210 H--------TGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESACLKY  270 (279)
T ss_pred             c--------cCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhccccc
Confidence            7        999999999999999999999999999999999999999999999999999998777654

>KOG3623|consensus

Probab=99.90  E-value=2.3e-24  Score=204.96  Aligned_cols=107  Identities=25%  Similarity=0.612  Sum_probs=96.1

Q ss_pred             ccccccccccccCChHhHHHHHhhhcCCCCCCCcccccccccccCHHHHHHHHHHcCC---------------CcccCcC
Q psy18077        145 ESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQ---------------ICQCPHC  209 (451)
Q Consensus       145 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---------------~~~C~~C  209 (451)
                      ....|++|.+.+.....|+.|++.-+. .....|.|.+|.++|.....|..||.+|..               .|+|..|
T Consensus       209 qlltcpycdrgykrltslkeHikyrhe-kne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtEC  287 (1007)
T KOG3623|consen  209 QLLTCPYCDRGYKRLTSLKEHIKYRHE-KNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTEC  287 (1007)
T ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHh-hCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhcccccccc
Confidence            346899999999999999999986542 245679999999999999999999998842               5899999


Q ss_pred             ccccCCHHHHHHHHHHhcCCCCcccccchhhcCChHhHHHHHH
Q psy18077        210 SKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQ  252 (451)
Q Consensus       210 ~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  252 (451)
                      ++.|..+..|+.|+|+|.|++||.|+.|+++|.....+..||.
T Consensus       288 gKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  288 GKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             chhhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            9999999999999999999999999999999999999988874

>KOG3623|consensus

Probab=99.89  E-value=1.3e-23  Score=199.96  Aligned_cols=104  Identities=32%  Similarity=0.626  Sum_probs=94.9

Q ss_pred             CcccccccccccCHHHHHHHHHHcCC----CcccCcCccccCCHHHHHHHHHHhcC-------------CCCcccccchh
Q psy18077        177 ARTCPQCGKLYVSMPAYSMHLRTHNQ----ICQCPHCSKSFSRPWLLQGHIRTHTG-------------EKPFKCKVCDK  239 (451)
Q Consensus       177 ~~~C~~C~~~f~~~~~l~~H~~~h~~----~~~C~~C~~~f~~~~~L~~H~~~h~~-------------~~~~~C~~C~~  239 (451)
                      ...|++|.+.+.....|..|++..+.    .|.|..|.++|..+..|.+||.+|..             .+.|+|..|++
T Consensus       210 lltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccch
Confidence            46899999999999999999876432    78999999999999999999998853             25699999999


Q ss_pred             hcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchh
Q psy18077        240 AFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHED  280 (451)
Q Consensus       240 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  280 (451)
                      +|+.+-.|+.|+|+|.|++||.|+.|++.|.....+..||.
T Consensus       290 AFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  290 AFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            99999999999999999999999999999999999988875

>KOG3576|consensus

Probab=99.65  E-value=1.8e-17  Score=134.67  Aligned_cols=124  Identities=28%  Similarity=0.589  Sum_probs=86.5

Q ss_pred             CCCcccccccccccCHHHHHHHHHHcCC--CcccCcCccccCCHHHHHHHHHHhcCCCCcccccchhhcCChHhHHHHHH
Q psy18077        175 TKARTCPQCGKLYVSMPAYSMHLRTHNQ--ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQ  252 (451)
Q Consensus       175 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  252 (451)
                      ...|.|.+|++.|.-..-|.+|++-|..  .+-|..||+.|.+...|++|+++|+|.+||+|..|++.|.....|..|++
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            4567888888888888778888777754  56777777777777777777777777777777777777777777777776


Q ss_pred             HcCCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccCChHHHHHHHHHhcCCCc
Q psy18077        253 THSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKP  323 (451)
Q Consensus       253 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  323 (451)
                      .-+|...            ....+.             ...+.|.|..||.+-.....+..|+..|+...|
T Consensus       195 kvhgv~~------------~yayke-------------rr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  195 KVHGVQH------------QYAYKE-------------RRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHcCchH------------HHHHHH-------------hhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            5544310            000000             234678888888887777788888877765443

>KOG3576|consensus

Probab=99.65  E-value=6.8e-17  Score=131.41  Aligned_cols=123  Identities=28%  Similarity=0.539  Sum_probs=88.8

Q ss_pred             CCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccCChHHHHHHHHHhcCCCceecccCcccccCh
Q psy18077        257 VKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALK  336 (451)
Q Consensus       257 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  336 (451)
                      ...|.|.+|++.|....-|.+|++-|        ...+.|.|..||+.|.+...|++|+++|+|.+||+|..|++.|.++
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch--------~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqr  186 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCH--------SDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQR  186 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhc--------cHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhh
Confidence            45688888888888888888888776        6667888888888888888888888888888888888888888888


Q ss_pred             hhHHhcccccCCCccCCCCCcccCcccccccccccccccCCChHHHHHHHHhccC
Q psy18077        337 SYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRS  391 (451)
Q Consensus       337 ~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  391 (451)
                      -.|..|++..+|-.-.    ........+.|.|..||.+-.....+..|++.|+.
T Consensus       187 csleshl~kvhgv~~~----yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  187 CSLESHLKKVHGVQHQ----YAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             ccHHHHHHHHcCchHH----HHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            8888887654443200    00111222356666666666666666666666654

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.26  E-value=9.5e-12  Score=120.92  Aligned_cols=97  Identities=22%  Similarity=0.586  Sum_probs=52.7

Q ss_pred             cccccchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccC-----
Q psy18077        232 FKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFA-----  306 (451)
Q Consensus       232 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~-----  306 (451)
                      +.|+.|++.|. ...|..|++.++  +++.|+ |++.+ .+..|..|+..+        .+.+++.|.+|++.|.     
T Consensus       454 ~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~th--------Cp~Kpi~C~fC~~~v~~g~~~  520 (567)
T PLN03086        454 VHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQAST--------CPLRLITCRFCGDMVQAGGSA  520 (567)
T ss_pred             ccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhcc--------CCCCceeCCCCCCccccCccc
Confidence            35555555553 445555555543  455555 55433 345555555444        3345566666665553     


Q ss_pred             -----ChHHHHHHHHHhcCCCceecccCcccccChhhHHhcc
Q psy18077        307 -----DKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHE  343 (451)
Q Consensus       307 -----~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  343 (451)
                           ..+.|..|..+. |.+++.|..||+.+..+ .|..|+
T Consensus       521 ~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~  560 (567)
T PLN03086        521 MDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQ  560 (567)
T ss_pred             cchhhhhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHH
Confidence                 134566666664 66667777776666543 344554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.25  E-value=1.5e-11  Score=119.59  Aligned_cols=145  Identities=19%  Similarity=0.524  Sum_probs=114.2

Q ss_pred             cccccccccccCChHhHHHHHhhhcCCCCCCCccccc--ccccccCHHHHHHHHHHcCCCcccCcCccccCCHHHHHHHH
Q psy18077        146 SFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQ--CGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHI  223 (451)
Q Consensus       146 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~C~~C~~~f~~~~~L~~H~  223 (451)
                      .-.|..|.+.... ..|..|....    ......|+.  |+..|. ...+..|       +.|+.|++.|. ...|..|+
T Consensus       407 ~V~C~NC~~~i~l-~~l~lHe~~C----~r~~V~Cp~~~Cg~v~~-r~el~~H-------~~C~~Cgk~f~-~s~LekH~  472 (567)
T PLN03086        407 TVECRNCKHYIPS-RSIALHEAYC----SRHNVVCPHDGCGIVLR-VEEAKNH-------VHCEKCGQAFQ-QGEMEKHM  472 (567)
T ss_pred             eEECCCCCCccch-hHHHHHHhhC----CCcceeCCcccccceee-ccccccC-------ccCCCCCCccc-hHHHHHHH
Confidence            3479999887655 4566777544    455677984  999984 3444444       47999999996 68899999


Q ss_pred             HHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccccccccC----------hHHHHhchhhcCCCCcCCCCCC
Q psy18077        224 RTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFAL----------KSYLYKHEDSSCLKSYDSSSSE  293 (451)
Q Consensus       224 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~----------~~~l~~H~~~~~~~~~~~~~~~  293 (451)
                      ++++  .++.|+ |++.+ .+..|..|+..|.+.+++.|.+|++.|..          ...|..|+..         .+.
T Consensus       473 ~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~---------CG~  539 (567)
T PLN03086        473 KVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESI---------CGS  539 (567)
T ss_pred             HhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHh---------cCC
Confidence            9986  789999 99755 67899999999999999999999999952          3578889765         478


Q ss_pred             cCeeccccccccCChHHHHHHHHHh
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTH  318 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h  318 (451)
                      +++.|..|++.+..+ .|..|+..-
T Consensus       540 rt~~C~~Cgk~Vrlr-dm~~H~~~~  563 (567)
T PLN03086        540 RTAPCDSCGRSVMLK-EMDIHQIAV  563 (567)
T ss_pred             cceEccccCCeeeeh-hHHHHHHHh
Confidence            999999999998766 577886543

>PHA00733 hypothetical protein

Probab=99.23  E-value=1.1e-11  Score=98.27  Aligned_cols=84  Identities=15%  Similarity=0.192  Sum_probs=73.0

Q ss_pred             cccccccccccCCChHHHHHH--HHhccCCCCCCCcccCccccccCChHHHHHHHHHcCCccccccccccCCChhhHHHH
Q psy18077        365 ISFQCRDCGKHYSTSSNLARH--RQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGH  442 (451)
Q Consensus       365 ~~~~C~~C~~~f~~~~~L~~H--~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H  442 (451)
                      +++.|.+|.+.|.....|..|  ++.|....+.+||.|+.|++.|.+...|..|++.|..+|.|++|+++|.....|..|
T Consensus        39 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~CgK~F~~~~sL~~H  118 (128)
T PHA00733         39 KRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTEHSKVCPVCGKEFRNTDSTLDH  118 (128)
T ss_pred             hhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcCCcCccCCCCCCccCCHHHHHHH
Confidence            479999999999998888777  443333234789999999999999999999999887789999999999999999999


Q ss_pred             HhhhcC
Q psy18077        443 IRTHTG  448 (451)
Q Consensus       443 ~~~h~~  448 (451)
                      ++..|+
T Consensus       119 ~~~~h~  124 (128)
T PHA00733        119 VCKKHN  124 (128)
T ss_pred             HHHhcC
Confidence            998876

>PHA00733 hypothetical protein

Probab=99.09  E-value=1.1e-10  Score=92.69  Aligned_cols=86  Identities=19%  Similarity=0.293  Sum_probs=52.7

Q ss_pred             CCceecccCcccccChhhHHhc--ccccCCCccCCCCCcccCcccccccccccccccCCChHHHHHHHHhccCCCCCCCc
Q psy18077        321 VKPFVCEKCGKAFALKSYLYKH--EDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKAR  398 (451)
Q Consensus       321 ~~~~~C~~C~~~f~~~~~L~~H--~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~  398 (451)
                      .+++.|.+|...|..+..|..|  ++.            ++..+...+|.|+.|++.|.+...|..|++.|.     .+|
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~------------~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~-----~~~  100 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYK------------LLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTE-----HSK  100 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHh------------hcccCCCCCccCCCCCCcCCCHHHHHHHHhcCC-----cCc
Confidence            4556666666666655555444  111            022333446777777777777777777776652     357


Q ss_pred             ccCccccccCChHHHHHHHHHcCCc
Q psy18077        399 TCPQCGKLYVSMPAYSMHLRTHNQI  423 (451)
Q Consensus       399 ~C~~C~~~f~~~~~l~~H~~~H~~~  423 (451)
                      .|..|++.|.....|..|+...++.
T Consensus       101 ~C~~CgK~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733        101 VCPVCGKEFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             cCCCCCCccCCHHHHHHHHHHhcCc
Confidence            7777777777777777777766553

>PHA02768 hypothetical protein; Provisional

Probab=98.96  E-value=3.6e-10  Score=73.06  Aligned_cols=42  Identities=29%  Similarity=0.573  Sum_probs=21.6

Q ss_pred             cccCccccccCChHHHHHHHHHcCCccccccccccCCChhhH
Q psy18077        398 RTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLL  439 (451)
Q Consensus       398 ~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l  439 (451)
                      |.|+.||+.|.....|..|+++|+++|+|..|++.|.+.+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHNTNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcCCcccCCcccceeccccee
Confidence            455555555555555555555555445555555555544443

>KOG3993|consensus

Probab=98.89  E-value=2e-10  Score=104.35  Aligned_cols=194  Identities=19%  Similarity=0.246  Sum_probs=101.3

Q ss_pred             CcccCcCccccCCHHHHHHHHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeec--cc-ccccccChHHHHhch
Q psy18077        203 ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC--EK-CGKAFALKSYLYKHE  279 (451)
Q Consensus       203 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~-C~~~f~~~~~l~~H~  279 (451)
                      .|.|..|...|.+...|.+|.-.-.--..|+|+.|+|.|.-..+|..|.|+|.....-.=  .. =.+...+....+.-.
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            567888888888888888875221112238888888888888888888888854221000  00 000000011111110


Q ss_pred             hhcCCCCcCCCCCCcCeeccccccccCChHHHHHHHHHhcCCC-----------------ceecccCcccccChhhHHhc
Q psy18077        280 DSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVK-----------------PFVCEKCGKAFALKSYLYKH  342 (451)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-----------------~~~C~~C~~~f~~~~~L~~H  342 (451)
                      +  .    .....+..|.|..|++.|.+...|+.|+.+|+..-                 .+-|..|.-.+.....--.+
T Consensus       347 r--s----g~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~  420 (500)
T KOG3993|consen  347 R--S----GDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDE  420 (500)
T ss_pred             c--c----CCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccc
Confidence            0  0    00123347888888888888888888877765310                 13455555544433222222


Q ss_pred             ccccCCCccCCCCCcccCcccccccccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHH
Q psy18077        343 EDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRT  419 (451)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  419 (451)
                      ...+-+              ......|++|+..+.++..--.+.+.-..   +..|.|.+|...|.+...|.+|+..
T Consensus       421 vl~~a~--------------sael~~pp~~~~ppsss~~sgg~~rlg~~---~q~f~~ky~~atfyss~~ltrhin~  480 (500)
T KOG3993|consen  421 VLYVAG--------------SAELELPPYDGSPPSSSGSSGGYGRLGIA---EQGFTCKYCPATFYSSPGLTRHINK  480 (500)
T ss_pred             eeeeec--------------cccccCCCCCCCCcccCCCCCccccccch---hhccccccchHhhhcCcchHhHhhh
Confidence            110000              00023455566555554444444433222   4556666666666666666666554

>KOG3993|consensus

Probab=98.84  E-value=8.2e-10  Score=100.48  Aligned_cols=210  Identities=19%  Similarity=0.266  Sum_probs=135.2

Q ss_pred             CcccccchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccCChHH
Q psy18077        231 PFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSN  310 (451)
Q Consensus       231 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~  310 (451)
                      .|.|..|...|...-.|.+|.-.-.-...|+|+.|+|.|.-..+|..|.+-|-.+.-....+..|-+=     ...+...
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~-----~~~~rae  341 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQ-----AVETRAE  341 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhh-----hhhhhhh
Confidence            39999999999999999999743333345999999999999999999999885544333223222110     0001111


Q ss_pred             HHHHHHH--hcCCCceecccCcccccChhhHHhcccccCCCccCCCCCc--ccCcccccccccccccccCCChHHHHHHH
Q psy18077        311 LRAHIQT--HSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNG--HLNKFTTISFQCRDCGKHYSTSSNLARHR  386 (451)
Q Consensus       311 l~~H~~~--h~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~--~~~~~~~~~~~C~~C~~~f~~~~~L~~H~  386 (451)
                      .+.=-+.  -.....|.|.+|++.|++...|+.|+.+|...........  .+.......+.|..|.-.+.....--.+.
T Consensus       342 ~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~v  421 (500)
T KOG3993|consen  342 VQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEV  421 (500)
T ss_pred             hhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccce
Confidence            1110000  0223479999999999999999999876654432221100  01112223577888888877766555555


Q ss_pred             HhccCCCCCCCcccCccccccCChHHHHHHHHHc--CCccccccccccCCChhhHHHHHhhhc
Q psy18077        387 QIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH--NQICQCPHCSKSFSRPWLLQGHIRTHT  447 (451)
Q Consensus       387 ~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~~h~  447 (451)
                      ..+.+  ....-.|++|+-.+.+...--.+.+--  ...|.|.+|.-+|.....|.+|+..-|
T Consensus       422 l~~a~--sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~H  482 (500)
T KOG3993|consen  422 LYVAG--SAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCH  482 (500)
T ss_pred             eeeec--cccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcC
Confidence            55544  234466888887777765544443322  233999999999999999999987644

>PHA02768 hypothetical protein; Provisional

Probab=98.83  E-value=1.5e-09  Score=70.21  Aligned_cols=44  Identities=11%  Similarity=0.453  Sum_probs=39.7

Q ss_pred             CeeccccccccCChHHHHHHHHHhcCCCceecccCcccccChhhHH
Q psy18077        295 PFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLY  340 (451)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  340 (451)
                      -|.|+.||+.|...+.|..|+++|+  ++|+|..|++.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4899999999999999999999998  7999999999999877664

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.65  E-value=2.1e-08  Score=55.39  Aligned_cols=26  Identities=50%  Similarity=1.018  Sum_probs=23.7

Q ss_pred             HHHHHHHHhcCCCceecccCcccccC
Q psy18077        310 NLRAHIQTHSKVKPFVCEKCGKAFAL  335 (451)
Q Consensus       310 ~l~~H~~~h~~~~~~~C~~C~~~f~~  335 (451)
                      +|.+|+++|++++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            48899999999999999999999964

...

>PHA00732 hypothetical protein

Probab=98.54  E-value=5.9e-08  Score=69.45  Aligned_cols=50  Identities=28%  Similarity=0.551  Sum_probs=40.2

Q ss_pred             ccccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHcCCc
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI  423 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~  423 (451)
                      ||.|..|++.|.+...|..|++.++.     ++.|+.|++.|.   .|..|++++.-+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~-----~~~C~~CgKsF~---~l~~H~~~~~~~   50 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT-----LTKCPVCNKSYR---RLNQHFYSQYDI   50 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC-----CCccCCCCCEeC---ChhhhhcccCCc
Confidence            58899999999999999999985332     358999999997   588888776655

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.45  E-value=1.2e-07  Score=52.32  Aligned_cols=26  Identities=42%  Similarity=0.853  Sum_probs=22.3

Q ss_pred             HHHHHHHhccCCCCCCCcccCccccccCC
Q psy18077        381 NLARHRQIHRSPDDTKARTCPQCGKLYVS  409 (451)
Q Consensus       381 ~L~~H~~~H~~~~~~~~~~C~~C~~~f~~  409 (451)
                      +|.+|+++|++   ++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~---~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTG---EKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSS---SSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCC---CCCCCCCCCcCeeCc
Confidence            48899999987   899999999998863

...

>PHA00732 hypothetical protein

Probab=98.33  E-value=3.7e-07  Score=65.38  Aligned_cols=48  Identities=31%  Similarity=0.647  Sum_probs=42.0

Q ss_pred             CcccCccccccCChHHHHHHHHHcCCccccccccccCCChhhHHHHHhhhc
Q psy18077        397 ARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHT  447 (451)
Q Consensus       397 ~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~~~h~  447 (451)
                      ||.|..|++.|.+...|+.|++.++..+.|+.|++.|.   .|..|++++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTLTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCCCccCCCCCEeC---ChhhhhcccC
Confidence            68999999999999999999996555689999999998   5888887653

>PHA00616 hypothetical protein

Probab=98.33  E-value=2.3e-07  Score=57.05  Aligned_cols=39  Identities=15%  Similarity=0.275  Sum_probs=31.7

Q ss_pred             ccccccccccCCChHHHHHHHHhccCCCCCCCcccCcccccc
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLY  407 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f  407 (451)
                      ||+|+.||+.|..++.|..|++.|++   ++++.|.+=-..|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg---~~~~~~~~~y~~f   39 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHK---QNKLTLEYFYIYF   39 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcC---CCccceeEEEEEE
Confidence            58899999999999999999999997   7888887543333

>PHA00616 hypothetical protein

Probab=98.29  E-value=3.7e-07  Score=56.12  Aligned_cols=34  Identities=21%  Similarity=0.415  Sum_probs=31.6

Q ss_pred             CeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        295 PFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      ||+|..||+.|...+.|..|++.|++++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            6899999999999999999999999999998875

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.19  E-value=2.8e-06  Score=56.51  Aligned_cols=51  Identities=27%  Similarity=0.538  Sum_probs=32.3

Q ss_pred             cccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHcC
Q psy18077        367 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHN  421 (451)
Q Consensus       367 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~  421 (451)
                      |.|++|++ ..+...|..|....|..+ .+.+.|++|...+.  ..|..||..++
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~-~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSE-SKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCC-CCCccCCCchhhhh--hHHHHHHHHhc
Confidence            67777777 455667777766555432 44677777776543  36666766554

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.18  E-value=2.3e-06  Score=56.86  Aligned_cols=49  Identities=29%  Similarity=0.498  Sum_probs=40.2

Q ss_pred             CcccCccccccCChHHHHHHHHHcCC----ccccccccccCCChhhHHHHHhhhcC
Q psy18077        397 ARTCPQCGKLYVSMPAYSMHLRTHNQ----ICQCPHCSKSFSRPWLLQGHIRTHTG  448 (451)
Q Consensus       397 ~~~C~~C~~~f~~~~~l~~H~~~H~~----~~~C~~C~~~f~~~~~l~~H~~~h~~  448 (451)
                      .|.|++|++ ..+...|..|+...+.    .+.|++|...+.  ..|..||+.+|+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            489999999 5667899999876543    389999999766  499999998875

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.93  E-value=4.5e-06  Score=44.72  Aligned_cols=22  Identities=45%  Similarity=0.830  Sum_probs=12.2

Q ss_pred             cccccccccCCChhhHHHHHhh
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRT  445 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~  445 (451)
                      |+|++|++.|.++..|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4455555555555555555554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.86  E-value=6.6e-06  Score=63.08  Aligned_cols=72  Identities=29%  Similarity=0.478  Sum_probs=20.0

Q ss_pred             ccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHcCC-ccccccccccCCChhhHHHHHhhh
Q psy18077        368 QCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQ-ICQCPHCSKSFSRPWLLQGHIRTH  446 (451)
Q Consensus       368 ~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~-~~~C~~C~~~f~~~~~l~~H~~~h  446 (451)
                      +|.+|+..|.+...|..|+...|+..      -. ....+.....+..+++.-.. .+.|.+|++.|.+...|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~------~~-~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFD------IP-DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccc------cc-cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            59999999999999999998777521      11 12223344555556554433 488999999999999999999864

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.86  E-value=7.9e-06  Score=43.73  Aligned_cols=22  Identities=45%  Similarity=0.925  Sum_probs=11.6

Q ss_pred             cccccccccCCChHHHHHHHHh
Q psy18077        367 FQCRDCGKHYSTSSNLARHRQI  388 (451)
Q Consensus       367 ~~C~~C~~~f~~~~~L~~H~~~  388 (451)
                      |.|+.|++.|.++..|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            3455555555555555555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.71  E-value=1.9e-05  Score=42.70  Aligned_cols=24  Identities=50%  Similarity=0.859  Sum_probs=12.3

Q ss_pred             cccccccccCCChhhHHHHHhhhc
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRTHT  447 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~h~  447 (451)
                      |.|++|++.|.+...|..|+++||
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            445555555555555555555543

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.61  E-value=3.8e-05  Score=41.44  Aligned_cols=23  Identities=43%  Similarity=0.917  Sum_probs=11.2

Q ss_pred             cccccccccCCChHHHHHHHHhc
Q psy18077        367 FQCRDCGKHYSTSSNLARHRQIH  389 (451)
Q Consensus       367 ~~C~~C~~~f~~~~~L~~H~~~H  389 (451)
                      |.|++|++.|.+...|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            34555555555555555555544

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.59  E-value=4.2e-05  Score=58.52  Aligned_cols=24  Identities=29%  Similarity=0.670  Sum_probs=14.5

Q ss_pred             ccccccccccCCChHHHHHHHHhc
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQIH  389 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~H  389 (451)
                      .+.|.+|++.|.+...|..||+.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            366666666666666666666653

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.44  E-value=6.9e-05  Score=41.82  Aligned_cols=17  Identities=41%  Similarity=0.944  Sum_probs=6.0

Q ss_pred             cCccccccCChHHHHHH
Q psy18077        400 CPQCGKLYVSMPAYSMH  416 (451)
Q Consensus       400 C~~C~~~f~~~~~l~~H  416 (451)
                      |..|++.|.+...|..|
T Consensus         4 C~~C~~~F~~~~~l~~H   20 (27)
T PF13912_consen    4 CDECGKTFSSLSALREH   20 (27)
T ss_dssp             ETTTTEEESSHHHHHHH
T ss_pred             CCccCCccCChhHHHHH
Confidence            33333333333333333

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.40  E-value=8.2e-05  Score=41.50  Aligned_cols=26  Identities=42%  Similarity=0.907  Sum_probs=24.0

Q ss_pred             ccccccccccCCChHHHHHHHHhccC
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQIHRS  391 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~H~~  391 (451)
                      +|.|..|++.|.+...|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            58999999999999999999998864

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.35  E-value=7.6e-05  Score=66.10  Aligned_cols=53  Identities=36%  Similarity=0.770  Sum_probs=41.7

Q ss_pred             CCcCeeccc--cccccCChHHHHHHHHH-h------------------cCCCceecccCcccccChhhHHhccc
Q psy18077        292 SEKPFKCKV--CDKAFADKSNLRAHIQT-H------------------SKVKPFVCEKCGKAFALKSYLYKHED  344 (451)
Q Consensus       292 ~~~~~~C~~--C~~~f~~~~~l~~H~~~-h------------------~~~~~~~C~~C~~~f~~~~~L~~H~~  344 (451)
                      +++||+|++  |.++|.....|+.|+.- |                  ...|||+|+.|+|+|.....|+-|+.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            358888877  88888888888888753 2                  13489999999999999999988864

>KOG2231|consensus

Probab=97.23  E-value=0.00051  Score=68.61  Aligned_cols=20  Identities=30%  Similarity=0.767  Sum_probs=13.4

Q ss_pred             ccccchhhcCChHhHHHHHHH
Q psy18077        233 KCKVCDKAFADKSNLRAHIQT  253 (451)
Q Consensus       233 ~C~~C~~~f~~~~~l~~H~~~  253 (451)
                      .|..| ..|.+...|+.|+..
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~  136 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRD  136 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHH
Confidence            56666 666677777777744

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.19  E-value=0.00014  Score=64.39  Aligned_cols=54  Identities=24%  Similarity=0.533  Sum_probs=34.0

Q ss_pred             ccccccccc--ccccCCChHHHHHHHHhccC-------CC---------CCCCcccCccccccCChHHHHHH
Q psy18077        363 TTISFQCRD--CGKHYSTSSNLARHRQIHRS-------PD---------DTKARTCPQCGKLYVSMPAYSMH  416 (451)
Q Consensus       363 ~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~-------~~---------~~~~~~C~~C~~~f~~~~~l~~H  416 (451)
                      ..+||+|++  |.|.+.+...|+.|+.--|.       +.         ..|||+|.+|+|.+.....|+.|
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYH  417 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYH  417 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceec
Confidence            346899976  88999998899998753221       00         13555555555555555555555

>KOG1146|consensus

Probab=97.16  E-value=0.00013  Score=76.87  Aligned_cols=51  Identities=24%  Similarity=0.331  Sum_probs=35.1

Q ss_pred             cCeeccccccccCChHHHHHHHHH-hcCCCceecccCcccccChhhHHhccc
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQT-HSKVKPFVCEKCGKAFALKSYLYKHED  344 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~L~~H~~  344 (451)
                      ..+.|.+|++.-+-..+|+.||.. ++...|.-|-.|.-.+.....+..+.+
T Consensus       588 P~~~C~vc~yetniarnlrihmtss~~s~~p~~~Lq~~it~~l~~~~~~~~~  639 (1406)
T KOG1146|consen  588 PSWRCEVCSYETNIARNLRIHMTASPSSSPPSLVLQQNITSSLASLLGGQGR  639 (1406)
T ss_pred             CCcchhhhcchhhhhhccccccccCCCCCChHHHhhhcchhhccccccCcCC
Confidence            458899999888888888888875 333444666666666666665555554

>KOG2231|consensus

Probab=97.14  E-value=0.0011  Score=66.32  Aligned_cols=97  Identities=21%  Similarity=0.410  Sum_probs=48.2

Q ss_pred             ccccccccccCHHHHHHHHHHcCCCcccCcCcc---c------cCCHHHHHHHHHHhc-CCC----CcccccchhhcCCh
Q psy18077        179 TCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSK---S------FSRPWLLQGHIRTHT-GEK----PFKCKVCDKAFADK  244 (451)
Q Consensus       179 ~C~~C~~~f~~~~~l~~H~~~h~~~~~C~~C~~---~------f~~~~~L~~H~~~h~-~~~----~~~C~~C~~~f~~~  244 (451)
                      .|..| ..|.+...|..|+...+..+.|.+|-.   .      ..+...|..|++.-- +++    .-.|..|...|...
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~  195 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQHKLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDD  195 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhhhhhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccH
Confidence            35555 555555555555544444344443311   1      123345555554311 111    13466666666666


Q ss_pred             HhHHHHHHHcCCCCCeeccccc------ccccChHHHHhchh
Q psy18077        245 SNLRAHIQTHSKVKPFVCEKCG------KAFALKSYLYKHED  280 (451)
Q Consensus       245 ~~l~~H~~~h~~~~~~~C~~C~------~~f~~~~~l~~H~~  280 (451)
                      ..|..|++.++    |.|..|.      ..|.....|..|.+
T Consensus       196 ~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR  233 (669)
T KOG2231|consen  196 DELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFR  233 (669)
T ss_pred             HHHHHhhccce----eheeecCcccccchhcccchHHHHHhh
Confidence            66666666544    4555553      33455566666654

>KOG1146|consensus

Probab=97.06  E-value=0.00019  Score=75.60  Aligned_cols=128  Identities=20%  Similarity=0.339  Sum_probs=73.2

Q ss_pred             cCcCccccCCHHHHHHHHHH-hcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchhhcCC
Q psy18077        206 CPHCSKSFSRPWLLQGHIRT-HTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCL  284 (451)
Q Consensus       206 C~~C~~~f~~~~~L~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  284 (451)
                      |..|+..+.+...+..|+.. +...+.|+|+.|+..|+....|-.|||..+.+-.-  .+|.       ..+.|.+.--+
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~--~~c~-------~gq~~~~~arg  509 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS--AYCK-------AGQNHPRLARG  509 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccch--hHhH-------hcccccccccc
Confidence            44445555555555554433 34446677777777777777777777763322110  1111       11112111100


Q ss_pred             CCcCCCCCCcCeeccccccccCChHHHHHHHHH--hc----------C-------------------------------C
Q psy18077        285 KSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQT--HS----------K-------------------------------V  321 (451)
Q Consensus       285 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~----------~-------------------------------~  321 (451)
                      ..  -..+.++|.|..|...+.....|.+|+..  |.          |                               +
T Consensus       510 ~~--~~~~~~p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktk  587 (1406)
T KOG1146|consen  510 EV--YRCPGKPYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTK  587 (1406)
T ss_pred             cc--ccCCCCcccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCC
Confidence            00  01345678888888888888888888752  10          0                               1


Q ss_pred             CceecccCcccccChhhHHhccc
Q psy18077        322 KPFVCEKCGKAFALKSYLYKHED  344 (451)
Q Consensus       322 ~~~~C~~C~~~f~~~~~L~~H~~  344 (451)
                      -.+.|..|++.-.-...|..|+.
T Consensus       588 P~~~C~vc~yetniarnlrihmt  610 (1406)
T KOG1146|consen  588 PSWRCEVCSYETNIARNLRIHMT  610 (1406)
T ss_pred             CCcchhhhcchhhhhhccccccc
Confidence            24889999999998999999987

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.02  E-value=0.00034  Score=37.71  Aligned_cols=24  Identities=42%  Similarity=0.735  Sum_probs=13.2

Q ss_pred             cccccccccCCChhhHHHHHhhhcC
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRTHTG  448 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~h~~  448 (451)
                      |+|+.|++... ...|..|++.||+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            45666666665 5666666666553

>smart00355 ZnF_C2H2 zinc finger

Probab=96.98  E-value=0.00065  Score=37.16  Aligned_cols=23  Identities=43%  Similarity=0.909  Sum_probs=13.1

Q ss_pred             cccccccccCCChhhHHHHHhhh
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRTH  446 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~h  446 (451)
                      |.|..|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            34555555555555555555544

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.89  E-value=0.00043  Score=43.56  Aligned_cols=28  Identities=18%  Similarity=0.386  Sum_probs=13.9

Q ss_pred             cccccccccCCChhhHHHHHhhhcCCCC
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRTHTGGTN  451 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~  451 (451)
                      -.|++|+..+.+...|+.|+.++|+.||
T Consensus        25 atCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   25 ATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCcchhhccchhhHHHHHHHHhcccC
Confidence            4455566666666666666655555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.79  E-value=0.001  Score=36.36  Aligned_cols=23  Identities=35%  Similarity=0.914  Sum_probs=13.6

Q ss_pred             cccccccccCCChHHHHHHHHhc
Q psy18077        367 FQCRDCGKHYSTSSNLARHRQIH  389 (451)
Q Consensus       367 ~~C~~C~~~f~~~~~L~~H~~~H  389 (451)
                      |.|..|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            35666666666666666666544

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.70  E-value=0.0022  Score=57.70  Aligned_cols=127  Identities=24%  Similarity=0.488  Sum_probs=86.1

Q ss_pred             Cccccc--ccccccCHHHHHHHHHHcCCCcccCcCc---cccC------CHHHHHHHHHHhcCCCCc----ccccchhhc
Q psy18077        177 ARTCPQ--CGKLYVSMPAYSMHLRTHNQICQCPHCS---KSFS------RPWLLQGHIRTHTGEKPF----KCKVCDKAF  241 (451)
Q Consensus       177 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~C~~C~---~~f~------~~~~L~~H~~~h~~~~~~----~C~~C~~~f  241 (451)
                      .|.|+.  |..+......|..|.+..++.+.|.+|-   +.|.      +...|..|...-..+..|    .|..|...|
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~F  230 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGFVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIYF  230 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCcEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhcccee
Confidence            466754  7777777888888888877777777773   3343      335566665443222223    599999999


Q ss_pred             CChHhHHHHHHHcCCCCCeecccccc-------cccChHHHHhchhhcCCCCcCCCCCCcCeeccc--cc----cccCCh
Q psy18077        242 ADKSNLRAHIQTHSKVKPFVCEKCGK-------AFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKV--CD----KAFADK  308 (451)
Q Consensus       242 ~~~~~l~~H~~~h~~~~~~~C~~C~~-------~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~--C~----~~f~~~  308 (451)
                      .....|..|++.-+.    .|-+|++       -|.+...|..|.+.            ..|.|.+  |.    ..|...
T Consensus       231 YdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~------------~hy~ct~qtc~~~k~~vf~~~  294 (493)
T COG5236         231 YDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRN------------AHYCCTFQTCRVGKCYVFPYH  294 (493)
T ss_pred             cChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhc------------CceEEEEEEEecCcEEEeccH
Confidence            999999999987552    4666664       47777888888642            3466654  42    468889


Q ss_pred             HHHHHHHHHhc
Q psy18077        309 SNLRAHIQTHS  319 (451)
Q Consensus       309 ~~l~~H~~~h~  319 (451)
                      ..|..|+..-+
T Consensus       295 ~el~~h~~~~h  305 (493)
T COG5236         295 TELLEHLTRFH  305 (493)
T ss_pred             HHHHHHHHHHh
Confidence            99999976543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.67  E-value=0.0031  Score=39.77  Aligned_cols=33  Identities=33%  Similarity=0.681  Sum_probs=23.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKP  323 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  323 (451)
                      ..+.|-.|++|+..+....+|++|+.++++.+|
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            456888999999999999999999988887775

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG2785|consensus

Probab=96.63  E-value=0.0031  Score=57.97  Aligned_cols=49  Identities=22%  Similarity=0.428  Sum_probs=37.1

Q ss_pred             CcccCccccccCChHHHHHHHHHcCCc-------------------------ccccccc---ccCCChhhHHHHHhh
Q psy18077        397 ARTCPQCGKLYVSMPAYSMHLRTHNQI-------------------------CQCPHCS---KSFSRPWLLQGHIRT  445 (451)
Q Consensus       397 ~~~C~~C~~~f~~~~~l~~H~~~H~~~-------------------------~~C~~C~---~~f~~~~~l~~H~~~  445 (451)
                      |-.|-.|++.|.+...-..||..+++.                         |.|-.|+   +.|.+....+.||+.
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            456777777777777777777666542                         6799998   999999999999964

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.55  E-value=0.0014  Score=35.18  Aligned_cols=23  Identities=39%  Similarity=0.745  Sum_probs=10.3

Q ss_pred             cccccccccCCChHHHHHHHHhcc
Q psy18077        367 FQCRDCGKHYSTSSNLARHRQIHR  390 (451)
Q Consensus       367 ~~C~~C~~~f~~~~~L~~H~~~H~  390 (451)
                      |+|+.|++... ...|.+|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            34555555444 445555555443

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.54  E-value=0.0012  Score=35.88  Aligned_cols=22  Identities=41%  Similarity=0.700  Sum_probs=12.7

Q ss_pred             cccccccccCCChhhHHHHHhh
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRT  445 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~  445 (451)
                      |.|.+|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            3455666666666666666554

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.50  E-value=0.0013  Score=35.81  Aligned_cols=22  Identities=32%  Similarity=0.551  Sum_probs=13.1

Q ss_pred             cccCccccccCChHHHHHHHHH
Q psy18077        398 RTCPQCGKLYVSMPAYSMHLRT  419 (451)
Q Consensus       398 ~~C~~C~~~f~~~~~l~~H~~~  419 (451)
                      |.|.+|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666553

>PRK04860 hypothetical protein; Provisional

Probab=96.21  E-value=0.0028  Score=52.36  Aligned_cols=39  Identities=26%  Similarity=0.759  Sum_probs=34.1

Q ss_pred             cCeeccccccccCChHHHHHHHHHhcCCCceecccCcccccCh
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALK  336 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  336 (451)
                      -+|.|. |+.   ....+++|.++|+++++|.|..|+..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            479998 997   667889999999999999999999988654

>KOG2785|consensus

Probab=96.17  E-value=0.012  Score=54.21  Aligned_cols=54  Identities=19%  Similarity=0.256  Sum_probs=46.6

Q ss_pred             ccccccccccCCChHHHHHHHHhccCCC--------------------CCCCcccCccc---cccCChHHHHHHHHH
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQIHRSPD--------------------DTKARTCPQCG---KLYVSMPAYSMHLRT  419 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~--------------------~~~~~~C~~C~---~~f~~~~~l~~H~~~  419 (451)
                      |-.|-.|++.+.+...-..||..+||.-                    ...-|.|-.|+   +.|.+..+.+.||+.
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            6789999999999999999999998732                    12358999999   999999999999974

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.10  E-value=0.008  Score=54.26  Aligned_cols=128  Identities=21%  Similarity=0.391  Sum_probs=90.9

Q ss_pred             cccccc--cccccCChHhHHHHHhhhcCCCCCCCcccccccc---------cccCHHHHHHHHHHcCC------CcccCc
Q psy18077        146 SFQCRD--CGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGK---------LYVSMPAYSMHLRTHNQ------ICQCPH  208 (451)
Q Consensus       146 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~C~~---------~f~~~~~l~~H~~~h~~------~~~C~~  208 (451)
                      .|.|+.  |.........|..|.+..+     ..+.|.+|-.         ...+...|..|...-..      --.|..
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H-----~~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~F  225 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQH-----GFVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIF  225 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhc-----CcEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhh
Confidence            377875  7777778899999998865     2567777742         23455667777654321      236999


Q ss_pred             CccccCCHHHHHHHHHHhcCCCCcccccchh-------hcCChHhHHHHHHHcCCCCCeeccc--cc----ccccChHHH
Q psy18077        209 CSKSFSRPWLLQGHIRTHTGEKPFKCKVCDK-------AFADKSNLRAHIQTHSKVKPFVCEK--CG----KAFALKSYL  275 (451)
Q Consensus       209 C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~-------~f~~~~~l~~H~~~h~~~~~~~C~~--C~----~~f~~~~~l  275 (451)
                      |...|.+-..|..|++..+    -.|.+|++       -|++...|..|.+..+    |.|..  |.    ..|.....|
T Consensus       226 C~~~FYdDDEL~~HcR~~H----E~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----y~ct~qtc~~~k~~vf~~~~el  297 (493)
T COG5236         226 CKIYFYDDDELRRHCRLRH----EACHICDMVGPIRYQYFKSYEDLEAHFRNAH----YCCTFQTCRVGKCYVFPYHTEL  297 (493)
T ss_pred             ccceecChHHHHHHHHhhh----hhhhhhhccCccchhhhhCHHHHHHHhhcCc----eEEEEEEEecCcEEEeccHHHH
Confidence            9999999999999998754    35777754       4788888888887544    66643  43    468888999


Q ss_pred             HhchhhcCCCC
Q psy18077        276 YKHEDSSCLKS  286 (451)
Q Consensus       276 ~~H~~~~~~~~  286 (451)
                      ..|+...|+..
T Consensus       298 ~~h~~~~h~~~  308 (493)
T COG5236         298 LEHLTRFHKVN  308 (493)
T ss_pred             HHHHHHHhhcc
Confidence            99987665543

>KOG2482|consensus

Probab=95.95  E-value=0.013  Score=52.95  Aligned_cols=49  Identities=20%  Similarity=0.348  Sum_probs=39.1

Q ss_pred             eeccccccccCChHHHHHHHHHhcC---------------------------CCceecccCcccccChhhHHhccc
Q psy18077        296 FKCKVCDKAFADKSNLRAHIQTHSK---------------------------VKPFVCEKCGKAFALKSYLYKHED  344 (451)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h~~---------------------------~~~~~C~~C~~~f~~~~~L~~H~~  344 (451)
                      ..|-.|.....+...|..||.+-+.                           .+.-.|-.|...|.....|..|+.
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~  355 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMV  355 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcc
Confidence            5899999888888899999875331                           112458889999999999999986

>PRK04860 hypothetical protein; Provisional

Probab=95.76  E-value=0.0057  Score=50.55  Aligned_cols=38  Identities=24%  Similarity=0.684  Sum_probs=32.4

Q ss_pred             ccccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCCh
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSM  410 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~  410 (451)
                      +|.|. |+.   ....+.+|.++|.+   +++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g---~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRG---EAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcC---CccEECCCCCceeEEe
Confidence            79998 987   67788999999987   8899999999887643

>KOG2482|consensus

Probab=95.70  E-value=0.031  Score=50.63  Aligned_cols=162  Identities=20%  Similarity=0.289  Sum_probs=85.4

Q ss_pred             ccccccccccC-ChHhHHHHHhhhcCCCCCCCcccccccccccCHHHHHHHHHHcCCCcccCcCccccCCHHHHHHHHHH
Q psy18077        147 FQCRDCGKHYS-TSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRT  225 (451)
Q Consensus       147 ~~C~~C~~~f~-~~~~l~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~C~~C~~~f~~~~~L~~H~~~  225 (451)
                      .+|-.|+..+. +++....|+-.-++-.-..|       -.......|..|++..-..+.|-.|.+.|+.+..|+.||+.
T Consensus       145 lqClFCn~e~lgnRs~~l~Hlf~~H~lniGlp-------DniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrk  217 (423)
T KOG2482|consen  145 LQCLFCNNEGLGNRSEILEHLFHVHGLNIGLP-------DNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRK  217 (423)
T ss_pred             eEEEEecchhcccHHHHHHHHHHHhhhccCCC-------cceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHh
Confidence            46777776663 34555556533221000000       11233345555655555566788888888888888888765


Q ss_pred             --hcCCCC--------cccccchhhcCChHhHHHHHH----Hc---------------CCCCC--eecccccccccChHH
Q psy18077        226 --HTGEKP--------FKCKVCDKAFADKSNLRAHIQ----TH---------------SKVKP--FVCEKCGKAFALKSY  274 (451)
Q Consensus       226 --h~~~~~--------~~C~~C~~~f~~~~~l~~H~~----~h---------------~~~~~--~~C~~C~~~f~~~~~  274 (451)
                        |....|        |.=.+   .-..++-...|..    +.               .+..+  ..|-.|.....+...
T Consensus       218 K~HrrinPknreYDkfyiINY---~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~  294 (423)
T KOG2482|consen  218 KRHRRINPKNREYDKFYIINY---LEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVF  294 (423)
T ss_pred             ccCcccCCCccccceEEEEeH---hhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHH
Confidence              433322        11000   0000111111110    00               01112  578888887777888


Q ss_pred             HHhchhhcCCCCcCCC-------------------CCCcCeeccccccccCChHHHHHHHHHh
Q psy18077        275 LYKHEDSSCLKSYDSS-------------------SSEKPFKCKVCDKAFADKSNLRAHIQTH  318 (451)
Q Consensus       275 l~~H~~~~~~~~~~~~-------------------~~~~~~~C~~C~~~f~~~~~l~~H~~~h  318 (451)
                      |..||+..|.-.+...                   .....-.|-.|...|.....|..||.-+
T Consensus       295 l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  295 LFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             HHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            8888775543221110                   1123457888999999999999998753

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.69  E-value=0.0034  Score=34.82  Aligned_cols=22  Identities=32%  Similarity=0.626  Sum_probs=12.7

Q ss_pred             cccccccccCCChhhHHHHHhh
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRT  445 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~  445 (451)
                      |.|.+|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4456666666666666655544

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.31  E-value=0.0041  Score=34.51  Aligned_cols=21  Identities=24%  Similarity=0.542  Sum_probs=11.3

Q ss_pred             cccCccccccCChHHHHHHHH
Q psy18077        398 RTCPQCGKLYVSMPAYSMHLR  418 (451)
Q Consensus       398 ~~C~~C~~~f~~~~~l~~H~~  418 (451)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            445555555555555555544

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.81  E-value=0.016  Score=57.34  Aligned_cols=145  Identities=27%  Similarity=0.327  Sum_probs=86.8

Q ss_pred             cCeeccccccccCChHHHHHHHH--HhcCC--Cceecc--cCcccccChhhHHhcccccCCCccCCCC------------
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQ--THSKV--KPFVCE--KCGKAFALKSYLYKHEDSSCLKSYDSSS------------  355 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~L~~H~~~~~~~~~~~~~------------  355 (451)
                      .++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.....+..|...+.+.......            
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            35777777777777777777777  67777  777777  6777777777777776644333211000            


Q ss_pred             Cc--------ccCcccccccccc--cccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHcCCc-c
Q psy18077        356 NG--------HLNKFTTISFQCR--DCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI-C  424 (451)
Q Consensus       356 ~~--------~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~-~  424 (451)
                      ..        .........+.+.  .|-..+.....+..|...|... ....+.+..|.+.|.....+..|++.|... .
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (467)
T COG5048         368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSF-RPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAP  446 (467)
T ss_pred             CCCCccchhhccCccCCccccccccchhhhhcccccccccccccccc-CCcCCCCCcchhhccCcccccccccccccCCc
Confidence            00        0001111133442  3666667777777777666542 133577788888888888888888887543 3


Q ss_pred             ccccccccCCChhhH
Q psy18077        425 QCPHCSKSFSRPWLL  439 (451)
Q Consensus       425 ~C~~C~~~f~~~~~l  439 (451)
                      -+..+-+.|.....+
T Consensus       447 ~~~~~~~~~~~~~~~  461 (467)
T COG5048         447 LLCSILKSFRRDLDL  461 (467)
T ss_pred             eeeccccccchhhhh
Confidence            344444444444443

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.79  E-value=0.048  Score=29.48  Aligned_cols=19  Identities=26%  Similarity=0.754  Sum_probs=9.5

Q ss_pred             ccCccccccCChHHHHHHHH
Q psy18077        399 TCPQCGKLYVSMPAYSMHLR  418 (451)
Q Consensus       399 ~C~~C~~~f~~~~~l~~H~~  418 (451)
                      .|+.|+++| ....|..|++
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455555555 4445555543

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.74  E-value=0.056  Score=29.21  Aligned_cols=21  Identities=29%  Similarity=0.849  Sum_probs=18.1

Q ss_pred             cccccccccCCChHHHHHHHHh
Q psy18077        367 FQCRDCGKHYSTSSNLARHRQI  388 (451)
Q Consensus       367 ~~C~~C~~~f~~~~~L~~H~~~  388 (451)
                      ..|+.||+.| ....|.+|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            5799999999 77889999864

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.28  E-value=0.028  Score=55.54  Aligned_cols=157  Identities=27%  Similarity=0.385  Sum_probs=78.9

Q ss_pred             CcccccchhhcCChHhHHHHHH--HcCCC--CCeecc--cccccccChHHHHhchhhcCCCCcCCCCCCcCeeccc--cc
Q psy18077        231 PFKCKVCDKAFADKSNLRAHIQ--THSKV--KPFVCE--KCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKV--CD  302 (451)
Q Consensus       231 ~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~--C~  302 (451)
                      ++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.+...+..|...+        .+..++.+..  |.
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~  360 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLH--------TSISPAKEKLLNSS  360 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccc--------cCCCccccccccCc
Confidence            4666666666666666666666  56666  666666  5666666666666665544        2333333322  22


Q ss_pred             cccCChHHH-----HHHHHHhcCCCceecc--cCcccccChhhHHhcccccCCCccCCCCCcccCccccccccccccccc
Q psy18077        303 KAFADKSNL-----RAHIQTHSKVKPFVCE--KCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKH  375 (451)
Q Consensus       303 ~~f~~~~~l-----~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~  375 (451)
                      ..+.....-     ......-...+.+.+.  .|...+.....+..|...+.             ......+.+..|.+.
T Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~  427 (467)
T COG5048         361 SKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHL-------------SFRPYNCKNPPCSKS  427 (467)
T ss_pred             cccccccCCCCccchhhccCccCCccccccccchhhhhcccccccccccccc-------------ccCCcCCCCCcchhh
Confidence            222221110     0000111112233332  24444444444444432111             111125778889999


Q ss_pred             CCChHHHHHHHHhccCCCCCCCcccCccccccCChHH
Q psy18077        376 YSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPA  412 (451)
Q Consensus       376 f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~  412 (451)
                      |.....+..|++.|..   ..++-|..+ +.|.....
T Consensus       428 ~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~  460 (467)
T COG5048         428 FNRHYNLIPHKKIHTN---HAPLLCSIL-KSFRRDLD  460 (467)
T ss_pred             ccCccccccccccccc---CCceeeccc-cccchhhh
Confidence            9999999999988874   344444333 33433333

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.65  E-value=0.086  Score=31.10  Aligned_cols=22  Identities=18%  Similarity=0.407  Sum_probs=13.9

Q ss_pred             CcccCccccccCChHHHHHHHH
Q psy18077        397 ARTCPQCGKLYVSMPAYSMHLR  418 (451)
Q Consensus       397 ~~~C~~C~~~f~~~~~l~~H~~  418 (451)
                      +|.|.+|++.|.+...+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4566666666666666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>TIGR00622 ssl1 transcription factor ssl1

Probab=92.56  E-value=0.13  Score=39.33  Aligned_cols=23  Identities=22%  Similarity=0.325  Sum_probs=12.2

Q ss_pred             cccccccccCCChhhHHHHHhhh
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRTH  446 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~h  446 (451)
                      |+|+.|...|-..-.+-.|...|
T Consensus        82 y~C~~C~~~FC~dCD~fiHe~Lh  104 (112)
T TIGR00622        82 YVCAVCKNVFCVDCDVFVHESLH  104 (112)
T ss_pred             eeCCCCCCccccccchhhhhhcc
Confidence            55555555555555555554444

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.08  E-value=0.11  Score=30.58  Aligned_cols=23  Identities=17%  Similarity=0.489  Sum_probs=20.7

Q ss_pred             ccccccccccCCChHHHHHHHHh
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQI  388 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~  388 (451)
                      +|.|.+|++.|.+...+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999999999854

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>TIGR00622 ssl1 transcription factor ssl1

Probab=91.83  E-value=0.33  Score=37.10  Aligned_cols=26  Identities=15%  Similarity=0.294  Sum_probs=15.0

Q ss_pred             CCcccCccccccCChHHHHHHHHHcC
Q psy18077        396 KARTCPQCGKLYVSMPAYSMHLRTHN  421 (451)
Q Consensus       396 ~~~~C~~C~~~f~~~~~l~~H~~~H~  421 (451)
                      ..|+|+.|...|-..-.+-.|...|+
T Consensus        80 ~~y~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        80 HRYVCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             cceeCCCCCCccccccchhhhhhccC
Confidence            35666666666655555555555444

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2893|consensus

Probab=91.39  E-value=0.059  Score=46.18  Aligned_cols=46  Identities=28%  Similarity=0.597  Sum_probs=34.5

Q ss_pred             ccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHH-HHHc
Q psy18077        368 QCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMH-LRTH  420 (451)
Q Consensus       368 ~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~H  420 (451)
                      =|-+|++.|....-|..|++.       |-|+|-+|.+...+-..|..| |++|
T Consensus        12 wcwycnrefddekiliqhqka-------khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA-------KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeeecccccchhhhhhhhhhh-------ccceeeeehhhhccCCCceeehhhhh
Confidence            388899999998888888764       448899998887776666666 3444

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=89.95  E-value=0.51  Score=36.49  Aligned_cols=26  Identities=15%  Similarity=0.539  Sum_probs=19.4

Q ss_pred             cccc----ccccccCCChHHHHHHHHhccC
Q psy18077        366 SFQC----RDCGKHYSTSSNLARHRQIHRS  391 (451)
Q Consensus       366 ~~~C----~~C~~~f~~~~~L~~H~~~H~~  391 (451)
                      .|.|    ..|++.+.+...|..|++.+||
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            4777    7787777777778777777663

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=89.94  E-value=0.18  Score=29.35  Aligned_cols=24  Identities=33%  Similarity=1.025  Sum_probs=13.7

Q ss_pred             eeccccccccCChHHHHHHHHHhcCCCceecccCcc
Q psy18077        296 FKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGK  331 (451)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  331 (451)
                      |+|..||..+....            .++.|+.|+.
T Consensus         2 ~~C~~CGy~y~~~~------------~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE------------APWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc------------CCCcCcCCCC
Confidence            56666666554322            5566666654

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2893|consensus

Probab=89.89  E-value=0.093  Score=45.01  Aligned_cols=43  Identities=30%  Similarity=0.631  Sum_probs=32.1

Q ss_pred             ccCcCccccCCHHHHHHHHHHhcCCCCcccccchhhcCChHhHHHHH
Q psy18077        205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHI  251 (451)
Q Consensus       205 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  251 (451)
                      .|-.|++.|....-|.+|++.    +.|+|.+|.+.+.+--.|..|.
T Consensus        12 wcwycnrefddekiliqhqka----khfkchichkkl~sgpglsihc   54 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHC   54 (341)
T ss_pred             eeeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeeh
Confidence            477788888888888888765    3388888888877776776664

>KOG4173|consensus

Probab=89.05  E-value=0.26  Score=41.41  Aligned_cols=49  Identities=27%  Similarity=0.692  Sum_probs=29.9

Q ss_pred             ccCcCccccCCHHHHHHHHHHh----------cCCCCccccc--chhhcCChHhHHHHHHH
Q psy18077        205 QCPHCSKSFSRPWLLQGHIRTH----------TGEKPFKCKV--CDKAFADKSNLRAHIQT  253 (451)
Q Consensus       205 ~C~~C~~~f~~~~~L~~H~~~h----------~~~~~~~C~~--C~~~f~~~~~l~~H~~~  253 (451)
                      .|..|.+.|.+...|..|+...          .|...|+|-+  |+..|.+...-+.|+-.
T Consensus       108 sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~  168 (253)
T KOG4173|consen  108 SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIR  168 (253)
T ss_pred             hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHH
Confidence            3555555555555555554332          2444577765  88888888887777754

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=87.96  E-value=1  Score=34.73  Aligned_cols=25  Identities=28%  Similarity=0.601  Sum_probs=23.2

Q ss_pred             ccc----ccccccCCChhhHHHHHhhhcC
Q psy18077        424 CQC----PHCSKSFSRPWLLQGHIRTHTG  448 (451)
Q Consensus       424 ~~C----~~C~~~f~~~~~l~~H~~~h~~  448 (451)
                      |.|    ..|++.+.+...+.+|++.+||
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            889    9999999999999999999886

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG4173|consensus

Probab=86.61  E-value=0.18  Score=42.31  Aligned_cols=86  Identities=23%  Similarity=0.401  Sum_probs=46.9

Q ss_pred             cCeeccc--cccccCChHHHHHHHHHhcCCCceecccCcccccChhhHHhcccccCCCccCCCCCcccCccccccccc--
Q psy18077        294 KPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQC--  369 (451)
Q Consensus       294 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~C--  369 (451)
                      ..|.|++  |...|.....+..|..+-++   -.|..|.+.|.+...|..|+...+..-|..     +...+...|.|  
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa-----~veRG~dMy~Clv  149 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQA-----LVERGQDMYQCLV  149 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHH-----HHHcCccHHHHHH
Confidence            3455655  55666666656666544333   246666666666666666653222111110     11111225777  


Q ss_pred             ccccccCCChHHHHHHHH
Q psy18077        370 RDCGKHYSTSSNLARHRQ  387 (451)
Q Consensus       370 ~~C~~~f~~~~~L~~H~~  387 (451)
                      ..|+..|.+...-..|+.
T Consensus       150 EgCt~KFkT~r~RkdH~I  167 (253)
T KOG4173|consen  150 EGCTEKFKTSRDRKDHMI  167 (253)
T ss_pred             HhhhhhhhhhhhhhhHHH
Confidence            458888888887788864

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=84.39  E-value=0.5  Score=36.21  Aligned_cols=30  Identities=23%  Similarity=0.716  Sum_probs=22.5

Q ss_pred             cccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCCh
Q psy18077        367 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSM  410 (451)
Q Consensus       367 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~  410 (451)
                      ..|+.||++|....              ..|..|++||..|.-.
T Consensus        10 R~Cp~CG~kFYDLn--------------k~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDLN--------------KDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccCC--------------CCCccCCCCCCccCcc
Confidence            57888888887642              5678888888887654

The function of members of this family is unknown.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=83.87  E-value=0.66  Score=29.95  Aligned_cols=30  Identities=17%  Similarity=0.474  Sum_probs=21.8

Q ss_pred             CCCCcCeeccccccccCChHHHHHHHHHhc
Q psy18077        290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHS  319 (451)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  319 (451)
                      ..|+.-+.|+.|+..|.......+|+..-+
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            356777788888888888777777776533

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=82.51  E-value=1  Score=34.50  Aligned_cols=11  Identities=27%  Similarity=0.987  Sum_probs=5.9

Q ss_pred             cccccccccCC
Q psy18077        148 QCRDCGKHYST  158 (451)
Q Consensus       148 ~C~~C~~~f~~  158 (451)
                      .|+.||+.|..
T Consensus        11 ~Cp~CG~kFYD   21 (108)
T PF09538_consen   11 TCPSCGAKFYD   21 (108)
T ss_pred             cCCCCcchhcc
Confidence            45555555544

The function of members of this family is unknown.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=82.32  E-value=0.64  Score=30.03  Aligned_cols=27  Identities=19%  Similarity=0.445  Sum_probs=16.2

Q ss_pred             ccccccccccccCCChHHHHHHHHhcc
Q psy18077        364 TISFQCRDCGKHYSTSSNLARHRQIHR  390 (451)
Q Consensus       364 ~~~~~C~~C~~~f~~~~~L~~H~~~H~  390 (451)
                      +.-++|+.|+..|....++.+|+..-|
T Consensus        15 E~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          15 EEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             ceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            335566666666666666666665444

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=82.09  E-value=0.67  Score=40.69  Aligned_cols=57  Identities=19%  Similarity=0.282  Sum_probs=28.6

Q ss_pred             CceecccCcccccChhhHHhccccc-CCCccCCCCCcccCcccccccccccccccCCCh
Q psy18077        322 KPFVCEKCGKAFALKSYLYKHEDSS-CLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTS  379 (451)
Q Consensus       322 ~~~~C~~C~~~f~~~~~L~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~  379 (451)
                      +.+.||+|+..|.++.-+....+.. ....|...-. .++..-=....|+.||.+|...
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~-~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYK-GVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCceEeeecCCCccccC-CCCCeeeeEEECCCCCCccccc
Confidence            5578888888888776555554321 0000000000 0111001146899999987644

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=81.95  E-value=0.48  Score=34.00  Aligned_cols=30  Identities=30%  Similarity=0.774  Sum_probs=15.3

Q ss_pred             CcccCccccccCChHHHHHHHHHcCCccccccccccCC
Q psy18077        397 ARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFS  434 (451)
Q Consensus       397 ~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~  434 (451)
                      .|.|+.|++.        .+.|.-++.+.|..|++.|+
T Consensus        35 ~~~Cp~C~~~--------~VkR~a~GIW~C~kCg~~fA   64 (89)
T COG1997          35 KHVCPFCGRT--------TVKRIATGIWKCRKCGAKFA   64 (89)
T ss_pred             CCcCCCCCCc--------ceeeeccCeEEcCCCCCeec
Confidence            4556666553        12333445556666665554

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=80.89  E-value=0.92  Score=26.58  Aligned_cols=10  Identities=30%  Similarity=0.826  Sum_probs=5.8

Q ss_pred             eecccccccc
Q psy18077        296 FKCKVCDKAF  305 (451)
Q Consensus       296 ~~C~~C~~~f  305 (451)
                      |+|..||..+
T Consensus         3 ~~C~~CG~i~   12 (34)
T cd00729           3 WVCPVCGYIH   12 (34)
T ss_pred             EECCCCCCEe
Confidence            5566666554

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>smart00531 TFIIE Transcription initiation factor IIE

Probab=80.57  E-value=0.69  Score=37.95  Aligned_cols=12  Identities=25%  Similarity=1.046  Sum_probs=6.0

Q ss_pred             cccccccccCCC
Q psy18077        367 FQCRDCGKHYST  378 (451)
Q Consensus       367 ~~C~~C~~~f~~  378 (451)
                      |.|+.|+..|..
T Consensus       100 Y~Cp~C~~~y~~  111 (147)
T smart00531      100 YKCPNCQSKYTF  111 (147)
T ss_pred             EECcCCCCEeeH
Confidence            555555555443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	451
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		5e-32
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-27
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		5e-19
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		4e-16
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		4e-13
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-11
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		5e-09
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-13
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		6e-10
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		5e-13
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		7e-08
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		6e-05
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-13
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-08
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-05
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		8e-13
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		1e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		9e-05
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		8e-13
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		1e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-12
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-07
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-12
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-09
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-06
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-12
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-08
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		5e-05
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		3e-12
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-11
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		5e-12
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		9e-10
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		9e-07
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		1e-11
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		1e-11
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		9e-04
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-11
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		4e-11
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-05
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		2e-11
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		1e-08
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		3e-06
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-11
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		6e-07
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		2e-04
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-11
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		5e-10
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		1e-10
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-05
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		3e-10
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		4e-06
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-09
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-06
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-09
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-06
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		3e-09
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-08
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		4e-06
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-04
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		3e-08
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		4e-08
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-05
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-07
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		5e-06
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		1e-07
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		3e-06
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-07
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		5e-06
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		2e-07
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		8e-07
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		8e-07
1x6h_A	86	Solution Structures Of The C2h2 Type Zinc Finger Do		9e-07
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		2e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		6e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		5e-04
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		1e-05
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		9e-05
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		9e-05
2emx_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2emx_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-04
1bbo_A	57	High-Resolution Solution Structure Of The Double Cy		2e-04
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		4e-04
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		4e-04
2ct1_A	77	Solution Structure Of The Zinc Finger Domain Of Tra		6e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  135 bits (340), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 111/190 (58%), Gaps = 14/190 (7%)
Query: 156 YSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH--NQICQCPHCSKSF 213
           + +SS++A   Q    P + K   CP+CGK +      + H RTH   +  +CP C KSF
Sbjct: 4   FGSSSSVA---QAALEPGE-KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSF 59
Query: 214 SRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKS 273
           S    L  H RTHTGEKP+KC  C K+F+ ++NLRAH +TH+  KP+ C +CGK+F+  +
Sbjct: 60  SDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLA 119
Query: 274 YLYKHEDXXXXXXXXXXXXEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAF 333
           +L  H+             EKP+KC  C K+F+ + NL  H +TH+  KP+ C +CGK+F
Sbjct: 120 HLRAHQ--------RTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSF 171
Query: 334 ALKSYLYKHE 343
           + +  L  H+
Sbjct: 172 SRRDALNVHQ 181

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 102/194 (52%), Gaps = 26/194 (13%)
Query: 228 GEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXX 287
           GEKP+ C  C K+F+   +L  H +TH+  KP+ C +CGK+F+ K  L +H+        
Sbjct: 18  GEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQ-------- 69
Query: 288 XXXXXEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXX 347
                EKP+KC  C K+F+ ++NLRAH +TH+  KP+ C +CGK+F+  ++L  H+    
Sbjct: 70  RTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT 129
Query: 348 XXXXXXXXNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLY 407
                              ++C +CGK +S   NL  H++ H      K   CP+CGK +
Sbjct: 130 GEK---------------PYKCPECGKSFSREDNLHTHQRTH---TGEKPYKCPECGKSF 171
Query: 408 VSMPAYSMHLRTHN 421
               A ++H RTH 
Sbjct: 172 SRRDALNVHQRTHT 185

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 79/158 (50%), Gaps = 20/158 (12%)
Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXXX 352
           EKP+ C  C K+F+   +L  H +TH+  KP+ C +CGK+F+ K  L +H+         
Sbjct: 19  EKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEK-- 76
Query: 353 XXXNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPA 412
                         ++C +CGK +S  +NL  H++ H      K   CP+CGK +  +  
Sbjct: 77  -------------PYKCPECGKSFSQRANLRAHQRTH---TGEKPYACPECGKSFSQLAH 120
Query: 413 YSMHLRTH--NQICQCPHCSKSFSRPWLLQGHIRTHTG 448
              H RTH   +  +CP C KSFSR   L  H RTHTG
Sbjct: 121 LRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG 158

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 53/75 (70%)
Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
           +CP C KSFS+   LQ H RTHTGEKP+KC  C K+F+  S+L+ H +TH+  KP+ C +
Sbjct: 6   KCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCPE 65
Query: 265 CGKAFALKSYLYKHE 279
           CGK+F+   +L +H+
Sbjct: 66  CGKSFSRSDHLSRHQ 80

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 229 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXXX 288
           EKP+KC  C K+F+  SNL+ H +TH+  KP+ C +CGK+F+  S L KH+         
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQ--------R 53
Query: 289 XXXXEKPFKCKVCDKAFADKSNLRAHIQTHSKVK 322
               EKP+KC  C K+F+   +L  H +TH   K
Sbjct: 54  THTGEKPYKCPECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 15/98 (15%)
Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXXX 352
           EKP+KC  C K+F+  SNL+ H +TH+  KP+ C +CGK+F+  S L KH+         
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEK-- 59
Query: 353 XXXNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHR 390
                         ++C +CGK +S S +L+RH++ H+
Sbjct: 60  -------------PYKCPECGKSFSRSDHLSRHQRTHQ 84

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 367 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH--NQIC 424
           ++C +CGK +S SSNL +H++ H      K   CP+CGK +        H RTH   +  
Sbjct: 5   YKCPECGKSFSQSSNLQKHQRTH---TGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 425 QCPHCSKSFSRPWLLQGHIRTH 446
           +CP C KSFSR   L  H RTH
Sbjct: 62  KCPECGKSFSRSDHLSRHQRTH 83

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
           C    C + FS+   L  HIR HTG+KPF+C++C + F+ +++L AHI+TH+  KPF C+
Sbjct: 7   CPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACD 66
Query: 264 KCGKAFA 270
            CG+ FA
Sbjct: 67  ICGRKFA 73

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 38/108 (35%)
Query: 229 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX 286
           E+P+ C V  CD+ F+ K+NL  HI+ H+                               
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHT------------------------------- 30
Query: 287 XXXXXXEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFA 334
                 +KPF+C++C + F+ +++L AHI+TH+  KPF C+ CG+ FA
Sbjct: 31  -----GQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRKFA 73

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 19/105 (18%)
Query: 293 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX 350
           E+P+ C V  CD+ F+ K+NL  HI+ H+  KPF C  C + F+ ++ L           
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASL----------- 50
Query: 351 XXXXXNGHLNKFTTIS-FQCRDCGKHYSTSSNLARHRQIHRSPDD 394
                N H+   T    F C  CG+ ++T     RH +IH    D
Sbjct: 51  -----NAHIRTHTGEKPFACDICGRKFATLHTRTRHTKIHLRQKD 90

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
           C    C + FSR   L  HIR HTG+KPF+C++C + F+   +L  HI+TH+  KPF C+
Sbjct: 7   CPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66
Query: 264 KCGKAFALKSYLYKH 278
            CG+ FA      +H
Sbjct: 67  ICGRKFARSDERKRH 81

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 229 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX 286
           E+P+ C V  CD+ F+  + L  HI+ H+  KPF C  C + F+   +L  H        
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH-------- 53
Query: 287 XXXXXXEKPFKCKVCDKAFADKSNLRAHIQTHSKVK 322
                 EKPF C +C + FA     + H + H + K
Sbjct: 54  IRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 17/104 (16%)
Query: 293 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX 350
           E+P+ C V  CD+ F+  + L  HI+ H+  KPF C  C + F+   +L  H        
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH-------- 53
Query: 351 XXXXXNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDD 394
                  H  +     F C  CG+ ++ S    RH +IH    D
Sbjct: 54  ----IRTHTGE---KPFACDICGRKFARSDERKRHTKIHLRQKD 90

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
           C    C + FSR   L  HIR HTG+KPF+C++C + F+   +L  HI+TH+  KPF C+
Sbjct: 7   CPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66
Query: 264 KCGKAFALKSYLYKH 278
            CG+ FA      +H
Sbjct: 67  ICGRKFARSDERKRH 81

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 229 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX 286
           E+P+ C V  CD+ F+  ++L  HI+ H+  KPF C  C + F+   +L  H        
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH-------- 53
Query: 287 XXXXXXEKPFKCKVCDKAFADKSNLRAHIQTHSKVK 322
                 EKPF C +C + FA     + H + H + K
Sbjct: 54  IRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 17/99 (17%)
Query: 293 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX 350
           E+P+ C V  CD+ F+  ++L  HI+ H+  KPF C  C + F+   +L  H        
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH-------- 53
Query: 351 XXXXXNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIH 389
                  H  +     F C  CG+ ++ S    RH +IH
Sbjct: 54  ----IRTHTGE---KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
           C    C + FSR   L  HIR HTG+KPF+C++C + F+   +L  HI+TH+  KPF C+
Sbjct: 7   CPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66
Query: 264 KCGKAFALKSYLYKH 278
            CG+ FA      +H
Sbjct: 67  ICGRKFARSDERKRH 81

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 229 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX 286
           E+P+ C V  CD+ F+    L  HI+ H+  KPF C  C + F+   +L  H        
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH-------- 53
Query: 287 XXXXXXEKPFKCKVCDKAFADKSNLRAHIQTHSKVK 322
                 EKPF C +C + FA     + H + H + K
Sbjct: 54  IRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 293 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX 350
           E+P+ C V  CD+ F+    L  HI+ H+  KPF C  C + F+   +L  H        
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH-------- 53
Query: 351 XXXXXNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIH 389
                  H  +     F C  CG+ ++ S    RH +IH
Sbjct: 54  ----IRTHTGE---KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
           C    C + FSR   L  HIR HTG+KPF+C++C + F+   +L  HI+TH+  KPF C+
Sbjct: 6   CPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 65
Query: 264 KCGKAFALKSYLYKH 278
            CG+ FA      +H
Sbjct: 66  ICGRKFARSDERKRH 80

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 258 KPFVC--EKCGKAFALKSYLYKHEDXXXXXXXXXXXXEKPFKCKVCDKAFADKSNLRAHI 315
           +P+ C  E C + F+    L +H              +KPF+C++C + F+   +L  HI
Sbjct: 2   RPYACPVESCDRRFSRSDELTRH--------IRIHTGQKPFQCRICMRNFSRSDHLTTHI 53
Query: 316 QTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +TH+  KPF C+ CG+ FA      +H
Sbjct: 54  RTHTGEKPFACDICGRKFARSDERKRH 80

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
           C    C + FSR   L  HIR HTG+KPF+C++C + F+   +L  HI+TH+  KPF C+
Sbjct: 7   CPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66
Query: 264 KCGKAFALKSYLYKH 278
            CG+ FA      +H
Sbjct: 67  ICGRKFARSDERKRH 81

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 258 KPFVC--EKCGKAFALKSYLYKHEDXXXXXXXXXXXXEKPFKCKVCDKAFADKSNLRAHI 315
           +P+ C  E C + F+    L +H              +KPF+C++C + F+   +L  HI
Sbjct: 3   RPYACPVESCDRRFSRSDELTRH--------IRIHTGQKPFQCRICMRNFSRSDHLTTHI 54
Query: 316 QTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +TH+  KPF C+ CG+ FA      +H
Sbjct: 55  RTHTGEKPFACDICGRKFARSDERKRH 81

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 43/67 (64%)
Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
           C    C + FS+   L  HIR HTG+KPF+C++C + F+  + L  HI+TH+  KPF C+
Sbjct: 7   CPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACD 66
Query: 264 KCGKAFA 270
            CG+ FA
Sbjct: 67  ICGRKFA 73

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 38/108 (35%)
Query: 229 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX 286
           E+P+ C V  CD+ F+ K+NL  HI+ H+                               
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHT------------------------------- 30
Query: 287 XXXXXXEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFA 334
                 +KPF+C++C + F+  + L  HI+TH+  KPF C+ CG+ FA
Sbjct: 31  -----GQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRKFA 73

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 19/105 (18%)
Query: 293 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX 350
           E+P+ C V  CD+ F+ K+NL  HI+ H+  KPF C  C + F+  + L           
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGL----------- 50
Query: 351 XXXXXNGHLNKFTTIS-FQCRDCGKHYSTSSNLARHRQIHRSPDD 394
                N H+   T    F C  CG+ ++T     RH +IH    D
Sbjct: 51  -----NQHIRTHTGEKPFACDICGRKFATLHTRDRHTKIHLRQKD 90

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
           C    C + FS+   L  HIR HTG+KPF+C++C + F+   +L  HI+TH+  KPF C+
Sbjct: 7   CPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66
Query: 264 KCGKAFALKSYLYKH 278
            CG+ FA      +H
Sbjct: 67  ICGRKFARSDERKRH 81

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 229 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX 286
           E+P+ C V  CD+ F+   +L  HI+ H+  KPF C  C + F+   +L  H        
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH-------- 53
Query: 287 XXXXXXEKPFKCKVCDKAFADKSNLRAHIQTHSKVK 322
                 EKPF C +C + FA     + H + H + K
Sbjct: 54  IRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 17/104 (16%)
Query: 293 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX 350
           E+P+ C V  CD+ F+   +L  HI+ H+  KPF C  C + F+   +L  H        
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH-------- 53
Query: 351 XXXXXNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDD 394
                  H  +     F C  CG+ ++ S    RH +IH    D
Sbjct: 54  ----IRTHTGE---KPFACDICGRKFARSDERKRHTKIHLRQKD 90

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 181 PQCGKLYVSMPAYSMHLRTHNQ----ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKV 236
           P C K Y  +    MH R H       C    C + FSR   L+ H R HTG KPF+CK 
Sbjct: 12  PGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT 71
Query: 237 CDKAFADKSNLRAHIQTHSKVKPFVCE--KCGKAFALKSYLYKHED 280
           C + F+   +L+ H +TH+  KPF C    C K FA    L +H +
Sbjct: 72  CQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN 117

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 203 ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC--KVCDKAFADKSNLRAHIQTHSKVKPF 260
           +C  P C+K + +   LQ H R HTGEKP++C  K C++ F+    L+ H + H+ VKPF
Sbjct: 8   MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF 67
Query: 261 VCEKCGKAFALKSYLYKHEDXXXXXXXXXXXXEKPFKCKV--CDKAFADKSNLRAHIQTH 318
            C+ C + F+   +L  H              EKPF C+   C K FA    L  H   H
Sbjct: 68  QCKTCQRKFSRSDHLKTH--------TRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
           C    C + FS    L  HIR HTG+KPF+C++C + F+   +L  HI+TH+  KPF C+
Sbjct: 7   CPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66
Query: 264 KCGKAFALKSYLYKH 278
            CG+ FA      +H
Sbjct: 67  ICGRKFARSDERKRH 81

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 229 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX 286
           E+P+ C V  CD+ F+D SNL  HI+ H+  KPF C  C + F+   +L  H        
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH-------- 53
Query: 287 XXXXXXEKPFKCKVCDKAFADKSNLRAHIQTHSKVK 322
                 EKPF C +C + FA     + H + H + K
Sbjct: 54  IRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 17/99 (17%)
Query: 293 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX 350
           E+P+ C V  CD+ F+D SNL  HI+ H+  KPF C  C + F+   +L  H        
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH-------- 53
Query: 351 XXXXXNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIH 389
                  H  +     F C  CG+ ++ S    RH +IH
Sbjct: 54  ----IRTHTGE---KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 203 ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPF 260
           IC    C  ++++ W LQ H+  HTGEKPF CK   C+K F    +L  H  TH+  K F
Sbjct: 14  ICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNF 73
Query: 261 VCEK--CGKAFALKSYLYKHEDXXXXXXXXXXXXEKPFKCKV--CDKAFADKSNLRAHIQ 316
            C+   C   F  K+ + KH +               + C    C KAF   + L+ H  
Sbjct: 74  TCDSDGCDLRFTTKANMKKHFNRFHNIKICV------YVCHFENCGKAFKKHNQLKVHQF 127
Query: 317 THSKVKPFVC--EKCGKAFALKSYLYKHE 343
           +H++  P+ C  E C K F+L S L +HE
Sbjct: 128 SHTQQLPYECPHEGCDKRFSLPSRLKRHE 156

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 227 TGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX 286
           +G    +C  C K F  K  L+ H + H+  KPF C KCGK +  K  L +HE       
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHE-----AR 57
Query: 287 XXXXXXEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
                 E+ F C VC + F  +  LR H+ +H+   P+ C  C + F  K  L  H
Sbjct: 58  NCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 297 KCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
           +C  C K F  K  L+ H + H+  KPF C KCGK +  K  L +HE
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHE 55

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 66/148 (44%), Gaps = 39/148 (26%)
Query: 180 CPQ--CGKLYVSMPAYSMHLRTHN-QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKV 236
           CP   C K++    A   HL TH  ++  C  C K+F     L+ H   HTGEKPF+C  
Sbjct: 8   CPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF 67
Query: 237 --CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXXXXXXXEK 294
             C K F+   NLR H++ H+  +P+VC                                
Sbjct: 68  EGCGKRFSLDFNLRTHVRIHTGDRPYVC-------------------------------- 95
Query: 295 PFKCKVCDKAFADKSNLRAHIQTHSKVK 322
           PF    C+K FA  +NL++HI TH+K K
Sbjct: 96  PFD--GCNKKFAQSTNLKSHILTHAKAK 121

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 17/116 (14%)
Query: 235 KVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXXXXXXXEK 294
           K C K F D S +R H+ TH   +  VC +CGKAF   S L +H+             EK
Sbjct: 11  KGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQ--------LVHTGEK 61
Query: 295 PFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVC--EKCGKAFA----LKSYLYKH 342
           PF+C    C K F+   NLR H++ H+  +P+VC  + C K FA    LKS++  H
Sbjct: 62  PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 51/126 (40%), Gaps = 23/126 (18%)
Query: 299 KVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXXXXXXNGH 358
           K C K F D S +R H+ TH   +  VC +CGKAF   S L +H+               
Sbjct: 11  KGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQ--------------- 54
Query: 359 LNKFTTISFQC--RDCGKHYSTSSNLARHRQIHRSPDDTKARTCP--QCGKLYVSMPAYS 414
           L       FQC    CGK +S   NL  H +IH      +   CP   C K +       
Sbjct: 55  LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH---TGDRPYVCPFDGCNKKFAQSTNLK 111
Query: 415 MHLRTH 420
            H+ TH
Sbjct: 112 SHILTH 117

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 44/74 (59%)
Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC 265
           C  C + F++ + L  H RTHT E+P+ C +C KAF  + +LR H   HSK KPF C++C
Sbjct: 20  CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQEC 79
Query: 266 GKAFALKSYLYKHE 279
           GK F     L  H+
Sbjct: 80  GKGFCQSRTLAVHK 93

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 258 KPFVCEKCGKAFALKSYLYKHEDXXXXXXXXXXXXEKPFKCKVCDKAFADKSNLRAHIQT 317
           K F+C+ CG+ F     L  HE             E+P+ C +C KAF  + +LR H   
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHE--------RTHTDERPYTCDICHKAFRRQDHLRDHRYI 67
Query: 318 HSKVKPFVCEKCGKAFALKSYLYKHE 343
           HSK KPF C++CGK F     L  H+
Sbjct: 68  HSKEKPFKCQECGKGFCQSRTLAVHK 93

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXXX 352
           +K F CK C + F    NL  H +TH+  +P+ C+ C KAF  + +L  H          
Sbjct: 15  KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEK-- 72
Query: 353 XXXNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIH 389
                         F+C++CGK +  S  LA H+ +H
Sbjct: 73  -------------PFKCQECGKGFCQSRTLAVHKTLH 96

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 232 FKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXXXXXX 291
           F CK+C K+F   S L  H+  HS  +P+ C+ CGK F  KS + KH             
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKH--------TFIHT 53
Query: 292 XEKPFKCKVCDKAFADKSNLRAHIQTHS 319
            EKP KC+VC KAF+  SNL  H + H+
Sbjct: 54  GEKPHKCQVCGKAFSQSSNLITHSRKHT 81

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 296 FKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXXXXXX 355
           F CK+C K+F   S L  H+  HS  +P+ C+ CGK F  KS + KH             
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPH--- 58
Query: 356 NGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIH 389
                       +C+ CGK +S SSNL  H + H
Sbjct: 59  ------------KCQVCGKAFSQSSNLITHSRKH 80

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 366 SFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMH--LRTHNQI 423
           SF C+ CGK +  SS L+ H  IH    DT+   C  CGK +        H  + T  + 
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIH---SDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP 57
Query: 424 CQCPHCSKSFSRPWLLQGHIRTHTG 448
            +C  C K+FS+   L  H R HTG
Sbjct: 58  HKCQVCGKAFSQSSNLITHSRKHTG 82

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 44/74 (59%)
Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
           +C  C K FSR   L+ H+R HTG KP+KCK CD A AD S+L  H++ HS  +PF C+ 
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 265 CGKAFALKSYLYKH 278
           C  A    S L  H
Sbjct: 70  CPYASRNSSQLTVH 83

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 231 PFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXXXXX 290
           P KC+VC K F+ K  L+ H++ H+ VKP+ C+ C  A A  S L KH            
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKH--------LRIH 59
Query: 291 XXEKPFKCKVCDKAFADKSNLRAHIQTHS 319
             E+PFKC++C  A  + S L  H+++H+
Sbjct: 60  SDERPFKCQICPYASRNSSQLTVHLRSHT 88

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 201 NQIC---QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKV--CDKAFADKSNLRAHIQTHS 255
           N +C   +CP   KSF   + L  HIR HTGEKPF C    C K FA   NL+ H +TH+
Sbjct: 57  NHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHT 116
Query: 256 KVKPFVC--EKCGKAFALKSYLYKH 278
             KPF C  E C + FA  S   KH
Sbjct: 117 GEKPFKCEFEGCDRRFANSSDRKKH 141

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 51/121 (42%), Gaps = 21/121 (17%)
Query: 235 KVCDKAFADKSNLRAHIQTHSKVKP----FVC--EKC---GKAFALKSYLYKHEDXXXXX 285
           K CD+ F+    L  H+       P     VC  E+C   GK+F  K  L  H       
Sbjct: 29  KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH------- 81
Query: 286 XXXXXXXEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVC--EKCGKAFALKSYLYK 341
                  EKPF C    C K FA   NL+ H +TH+  KPF C  E C + FA  S   K
Sbjct: 82  -IRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKK 140
Query: 342 H 342
           H
Sbjct: 141 H 141

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC--KVCDKAFADKSNLRAHIQTHSKVKPFV 261
           C  P C+K +++   L+ H+RTHTGEKP+KC  + CD  FA    L  H + H+  KPF 
Sbjct: 18  CDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQ 77
Query: 262 CEKCGKAFALKSYLYKH 278
           C  C ++F+   +L  H
Sbjct: 78  CGVCNRSFSRSDHLALH 94

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 237 CDKAFADKSNLRAHIQTHSKVKPFVC--EKCGKAFALKSYLYKHEDXXXXXXXXXXXXEK 294
           C K +   S+L+AH++TH+  KP+ C  E C   FA    L +H               K
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRH--------YRKHTGAK 74
Query: 295 PFKCKVCDKAFADKSNLRAHIQTH 318
           PF+C VC+++F+   +L  H++ H
Sbjct: 75  PFQCGVCNRSFSRSDHLALHMKRH 98

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 198 RTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKV--CDKAFADKSNLRAHIQTHS 255
           RT    C    C K++++   L+ H+RTHTGEKP+ C    C   FA    L  H + H+
Sbjct: 3   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 62
Query: 256 KVKPFVCEKCGKAFALKSYLYKH 278
             +PF C+KC +AF+   +L  H
Sbjct: 63  GHRPFQCQKCDRAFSRSDHLALH 85

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 10/84 (11%)
Query: 237 CDKAFADKSNLRAHIQTHSKVKPFVCE--KCGKAFALKSYLYKHEDXXXXXXXXXXXXEK 294
           C K +   S+L+AH++TH+  KP+ C+   CG  FA    L +H               +
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRH--------YRKHTGHR 65
Query: 295 PFKCKVCDKAFADKSNLRAHIQTH 318
           PF+C+ CD+AF+   +L  H++ H
Sbjct: 66  PFQCQKCDRAFSRSDHLALHMKRH 89

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 198 RTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKV--CDKAFADKSNLRAHIQTHS 255
           RT    C    C K++++   L+ H+RTHTGEKP+ C    C   FA    L  H + H+
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 256 KVKPFVCEKCGKAFALKSYLYKH 278
             +PF C+KC +AF+   +L  H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALH 84

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 10/84 (11%)
Query: 237 CDKAFADKSNLRAHIQTHSKVKPFVCE--KCGKAFALKSYLYKHEDXXXXXXXXXXXXEK 294
           C K +   S+L+AH++TH+  KP+ C+   CG  FA    L +H               +
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRH--------YRKHTGHR 64
Query: 295 PFKCKVCDKAFADKSNLRAHIQTH 318
           PF+C+ CD+AF+   +L  H++ H
Sbjct: 65  PFQCQKCDRAFSRSDHLALHMKRH 88

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSK 256
           +C +C K F   + L  H+RTHTGEKP+KC+ C+ A A K++LR H++ H K
Sbjct: 6   ECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK 57

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTH--SKVKPFVCE 263
           C  C K F   + L  H  +H+GEKP+ C VC   F  K  +  H+++H  S  KP++C+
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 264 KCGKAFALKSYLYKH 278
            CGK F+   +L  H
Sbjct: 70  SCGKGFSRPDHLNGH 84

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Query: 227 TGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX 286
           +G     C++C K F D  +L  H  +HS  KP+ C  CG  F  K  +  H        
Sbjct: 3   SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH------VR 56
Query: 287 XXXXXXEKPFKCKVCDKAFADKSNLRAHI-QTHS 319
                  KP+ C+ C K F+   +L  HI Q HS
Sbjct: 57  SHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 369 CRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQ------ 422
           C  CGK +    +L RH+  H      K  +CP CG  +      S H+R+H+       
Sbjct: 10  CEICGKIFRDVYHLNRHKLSH---SGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY 66
Query: 423 ICQCPHCSKSFSRPWLLQGHIR-THTG 448
           ICQ   C K FSRP  L GHI+  H+G
Sbjct: 67  ICQS--CGKGFSRPDHLNGHIKQVHSG 91

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 203 ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPF 260
           IC    C  ++++ W LQ H+  HTGEKPF CK   C+K F    +L  H  TH+  K F
Sbjct: 5   ICSFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNF 64
Query: 261 VCEK--CGKAFALKSYLYKH 278
            C+   C   F  K+ + KH
Sbjct: 65  TCDSDGCDLRFTTKANMKKH 84

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 195 MHLRTHN----QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC--KVCDKAFADKSNLR 248
           +H+R H       C    C KS+SR   L+ H+R+HTGEKP+ C  + C KAF++ S+  
Sbjct: 57  VHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRA 116
Query: 249 AHI-QTHSKVKPFVCE--KCGKAFALKSYLYKH 278
            H  +THS  KP+VC+   C K +   S L KH
Sbjct: 117 KHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKH 149

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 237 CDKAFADKSNLRAHIQT---HSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXXXXXXXE 293
           C + F  +  L  HI +   H + K FVC   G +  L+ +  ++              E
Sbjct: 9   CSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQY---MLVVHMRRHTGE 65
Query: 294 KPFKC--KVCDKAFADKSNLRAHIQTHSKVKPFVC--EKCGKAFALKSYLYKHED 344
           KP KC  + C K+++   NL+ H+++H+  KP++C  E C KAF+  S   KH++
Sbjct: 66  KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 209 CSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKA 268
           C KSF+       H+  H G +P+ C VC K F  K +L  H++ H+ +KP+ C  C K 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 269 FALKSYLYKH 278
           F  +   ++H
Sbjct: 75  FMWRDSFHRH 84

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 227 TGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXX 286
           +G+K + C+ C K+F  KS    H+  H  ++P+ C  CGK F +K +L  H        
Sbjct: 6   SGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI- 63
Query: 287 XXXXXXEKPFKCKVCDKAFADKSNLRAHIQTHSK 320
                  KP++C +C K F  + +   H+ + +K
Sbjct: 64  -------KPYECNICAKRFMWRDSFHRHVTSCTK 90

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 33/55 (60%)
Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKP 259
           +C  C KSFS    L  H RTHTGEKP+KC  C KAF  +S+L  H + H+   P
Sbjct: 20  KCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 294 KPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           + +KC  C K+F+  S+L  H +TH+  KP+ C++CGKAF  +S+L  H
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 31/50 (62%)
Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHS 255
           C  C K+FSR  +L  H R HTGEKP+KC  C KAF+  S L  H + H+
Sbjct: 17  CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT 66

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
           EKP+ C  C KAF+  S L  H + H+  KP+ C +CGKAF+  S L  H+
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ 62

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHS 255
           C    C + FSR   L  HIR HTG+KPF+C++C + F+   +L  HI+TH+
Sbjct: 22  CPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 230 KPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHED 280
           KPF+C++C + F+   +L  HI+TH+  KPF C+ CG+ FA      +H D
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD 52

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 294 KPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHED 344
           KPF+C++C + F+   +L  HI+TH+  KPF C+ CG+ FA      +H D
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD 52

>pdb|1X6H|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Transcriptional Repressor Ctcf Length = 86

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 224 RTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVK----PFVCEKCGKAFALKSYLYKHE 279
           RTHTGEKP+ C  CDK F  K  L  H + +         FVC KCGK F  ++ + +H 
Sbjct: 8   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHA 67
Query: 280 D 280
           D
Sbjct: 68  D 68

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 198 RTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC--KVCDKAFADKSNLRAHIQTH 254
           R  + IC  P C K++ +   L+ H RTHTGEKPF C  K C++ FA    L  H +TH
Sbjct: 14  RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 29/55 (52%)
Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKP 259
           +C  C  SF     L  H   HTGEKP++C +C   F   +NL+ H + HS  KP
Sbjct: 19  KCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 258 KPFVCEKCGKAFALKSYLYKHEDXXXXXXXXXXXXEKPFKCKVCDKAFADKSNLRAHIQT 317
           KP+ C++C  +F  K  L  H+             EKP++C +C   F   +NL+ H + 
Sbjct: 16  KPYKCDRCQASFRYKGNLASHK--------TVHTGEKPYRCNICGAQFNRPANLKTHTRI 67
Query: 318 HSKVKP 323
           HS  KP
Sbjct: 68  HSGEKP 73

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 228 GEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDXXXXXXX 287
           G   + C VC +++   ++LR H   HS  K + C  C K F L  Y  KHE        
Sbjct: 19  GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHE-------- 70
Query: 288 XXXXXEKPFKCKVCDKAFADKSNLRAHIQT 317
                E+ ++C  C K+F +   + +HI++
Sbjct: 71  IHHTGERRYQCLACGKSFINYQFMSSHIKS 100

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 232 FKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 278
           F C+VC +AFA + +L+ H ++H+  KP+ C  C +AF  +  L +H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 296 FKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           F C+VC +AFA + +L+ H ++H+  KP+ C  C +AF  +  L +H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>pdb|2EMX|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 273- 303) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 227 TGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKP 259
           +GEKPF C  C+KAF+ KS L  H QTH++ KP
Sbjct: 6   SGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP 38

>pdb|2EMX|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 273- 303) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKP 323
           EKPF C  C+KAF+ KS L  H QTH++ KP
Sbjct: 8   EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP 38

>pdb|1BBO|A Chain A, High-Resolution Solution Structure Of The Double Cys2His2 Zinc Finger From The Human Enhancer Binding Protein Mbp-1 Length = 57

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQT--HSK 256
           C  C     +P +L+ HIRTHT  +P+ C  C+ +F  K NL  H+++  HSK
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH 200
           F C  CGK Y  +S L+RHR+ H      + R+CP+CGK +      + HL+ H
Sbjct: 5   FFCNFCGKTYRDASGLSRHRRAHLG---YRPRSCPECGKCFRDQSEVNRHLKVH 55

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 367 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH 420
           F C  CGK Y  +S L+RHR+ H      + R+CP+CGK +      + HL+ H
Sbjct: 5   FFCNFCGKTYRDASGLSRHRRAHLG---YRPRSCPECGKCFRDQSEVNRHLKVH 55

>pdb|2CT1|A Chain A, Solution Structure Of The Zinc Finger Domain Of Transcriptional Repressor Ctcf Protein Length = 77

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 224 RTHTGEKPFKCKVCDKAFADKSNLRAHI-QTHSK-VKPFVCEKCGKAFALKSYLYKH 278
           RTH+GEKP++C +C   F     ++ HI Q H++ V  F C  C    A KS L  H
Sbjct: 8   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVH 64

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	451
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-48
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-47
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-44
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-41
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-41
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-39
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	8e-17
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-04
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-39
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-28
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-28
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-39
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-28
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-22
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-11
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-32
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-30
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-23
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-14
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-11
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-04
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-32
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-27
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	9e-22
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-15
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-31
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-28
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	9e-26
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	7e-20
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	9e-16
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-31
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	7e-25
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	9e-21
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-11
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-31
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-30
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-28
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-13
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-10
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-28
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-23
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-19
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-18
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-27
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-20
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-20
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-27
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-22
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-20
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-18
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-17
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	9e-13
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-26
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-24
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-20
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-18
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	9e-26
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-21
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-16
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-08
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-25
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-19
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-18
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-13
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-25
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-20
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-18
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-23
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-17
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-16
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-23
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-19
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-19
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	7e-18
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-11
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-22
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	7e-20
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-14
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	7e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-21
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-15
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-12
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	6e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-21
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-17
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-15
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	6e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-20
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-17
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-16
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	9e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-20
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-17
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-15
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-19
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-15
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-14
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	9e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-19
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-15
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-14
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	8e-14
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-10
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-10
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	8e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-19
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-17
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-16
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-14
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-14
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-16
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-12
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	8e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	8e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	9e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-15
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-10
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-14
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-11
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	8e-11
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-13
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-07
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-13
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-06
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-13
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-13
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-13
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-13
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-13
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-13
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-13
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-13
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-13
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-06
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-13
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-13
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-08
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-13
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-13
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-08
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-12
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-12
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-12
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-12
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	6e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-12
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-12
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-12
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	9e-08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	5e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-12
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-12
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-12
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-10
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	9e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-12
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-12
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-12
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-12
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-12
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-12
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-12
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	6e-07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-12
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-12
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-12
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-12
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-12
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-12
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-12
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-12
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-09
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	3e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	6e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-12
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-12
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-07
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-12
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-12
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-07
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-12
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-12
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-12
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-12
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-07
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-12
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-07
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-12
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-12
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-12
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-12
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-12
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-11
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	9e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-11
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	6e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	8e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-11
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-11
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-11
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-11
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-11
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-11
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-11
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-11
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-11
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-11
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-11
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-11
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-11
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-11
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-10
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-10
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-10
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	7e-07
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	5e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	5e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	7e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-10
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	9e-10
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-10
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	2e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-10
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-09
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	9e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-08
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-08
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	6e-08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	5e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	6e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	6e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	8e-08
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-07
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	4e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	6e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	8e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	4e-07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	4e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	6e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	6e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	7e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	4e-06
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	6e-06
2xqn_T	126	Testin, TESS; metal-binding protein, cytoskeleton,	1e-05
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	5e-05
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	2e-04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	1e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	2e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	6e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  161 bits (410), Expect = 9e-48
 Identities = 77/245 (31%), Positives = 110/245 (44%), Gaps = 68/245 (27%)

Query: 212 SFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFAL 271
           S               GEKP+ C  C K+F+   +L  H +TH+  KP+ C +CGK+F+ 
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61

Query: 272 KSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGK 331
           K  L +H+         + + EKP+KC  C K+F+ ++NLRAH +TH+  KP+ C +CGK
Sbjct: 62  KKDLTRHQ--------RTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGK 113

Query: 332 AFALKSYLYKH------EDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARH 385
           +F+  ++L  H      E     K Y                +C +CGK +S   NL  H
Sbjct: 114 SFSQLAHLRAHQRTHTGE-----KPY----------------KCPECGKSFSREDNLHTH 152

Query: 386 RQIHRSPDDT--KARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHI 443
           ++ H     T  K   CP+CG                          KSFSR   L  H 
Sbjct: 153 QRTH-----TGEKPYKCPECG--------------------------KSFSRRDALNVHQ 181

Query: 444 RTHTG 448
           RTHTG
Sbjct: 182 RTHTG 186

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  160 bits (407), Expect = 3e-47
 Identities = 75/241 (31%), Positives = 111/241 (46%), Gaps = 68/241 (28%)

Query: 157 STSSNLARHRQIHRSPDDT--KARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFS 214
             SS+      +         K   CP+CG                          KSFS
Sbjct: 4   FGSSSSVAQAALE-----PGEKPYACPECG--------------------------KSFS 32

Query: 215 RPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSY 274
           R   L  H RTHTGEKP+KC  C K+F+DK +L  H +TH+  KP+ C +CGK+F+ ++ 
Sbjct: 33  RSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRAN 92

Query: 275 LYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFA 334
           L  H+         + + EKP+ C  C K+F+  ++LRAH +TH+  KP+ C +CGK+F+
Sbjct: 93  LRAHQ--------RTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFS 144

Query: 335 LKSYLYKH------EDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQI 388
            +  L+ H      E     K Y                +C +CGK +S    L  H++ 
Sbjct: 145 REDNLHTHQRTHTGE-----KPY----------------KCPECGKSFSRRDALNVHQRT 183

Query: 389 H 389
           H
Sbjct: 184 H 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  152 bits (387), Expect = 2e-44
 Identities = 68/185 (36%), Positives = 103/185 (55%), Gaps = 25/185 (13%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDT--KARTCPQCGKLYVSMPAYSMHLRTHNQI- 203
           + C +CGK +S S +LA H++ H     T  K   CP+CGK +    +    L  H +  
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTH-----TGEKPYKCPECGKSF----SDKKDLTRHQRTH 72

Query: 204 -----CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVK 258
                 +CP C KSFS+   L+ H RTHTGEKP+ C  C K+F+  ++LRAH +TH+  K
Sbjct: 73  TGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEK 132

Query: 259 PFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTH 318
           P+ C +CGK+F+ +  L+ H+         + + EKP+KC  C K+F+ +  L  H +TH
Sbjct: 133 PYKCPECGKSFSREDNLHTHQ--------RTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

Query: 319 SKVKP 323
           +  K 
Sbjct: 185 TGKKT 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  145 bits (369), Expect = 1e-41
 Identities = 58/213 (27%), Positives = 84/213 (39%), Gaps = 44/213 (20%)

Query: 196 HLRTHNQ----ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCK--VCDKAFADKSNLRA 249
                      IC    C  ++++ W LQ H+  HTGEKPF CK   C+K F    +L  
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 250 HIQTHSKVKPFVCE--KCGKAFALKSYLYKHEDSSCLKSYDSSSSEK--PFKCKV--CDK 303
           H  TH+  K F C+   C   F  K+ + KH         +   + K   + C    C K
Sbjct: 63  HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHF--------NRFHNIKICVYVCHFENCGK 114

Query: 304 AFADKSNLRAHIQTHSKVKPFVC--EKCGKAFALKSYLYKHE----DSSCLKSYDSSSNG 357
           AF   + L+ H  +H++  P+ C  E C K F+L S L +HE       C K        
Sbjct: 115 AFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD------ 168

Query: 358 HLNKFTTISFQCRDCGKHYSTSSNLARHRQIHR 390
                      C   GK ++    L    + H+
Sbjct: 169 ----------SCSFVGKTWTLY--LKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  143 bits (364), Expect = 5e-41
 Identities = 54/221 (24%), Positives = 82/221 (37%), Gaps = 53/221 (23%)

Query: 221 GHIRTHTGEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCE--KCGKAFALKSYLY 276
           G        K + C    C  A+     L+AH+  H+  KPF C+   C K F    +L 
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 277 KHEDSSCLKSYDSSSSEKPFKCK--VCDKAFADKSNLRAHIQTHS--KVKPFVC--EKCG 330
           +H          + + EK F C    CD  F  K+N++ H       K+  +VC  E CG
Sbjct: 62  RHS--------LTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCG 113

Query: 331 KAFALKSYLYKH------EDSSCLKSYDSSSNGHLNKFTTISFQC--RDCGKHYSTSSNL 382
           KAF   + L  H      +       Y                +C    C K +S  S L
Sbjct: 114 KAFKKHNQLKVHQFSHTQQ-----LPY----------------ECPHEGCDKRFSLPSRL 152

Query: 383 ARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI 423
            RH ++H      K  +C   GK       ++++L+   + 
Sbjct: 153 KRHEKVHAGYPCKKDDSCSFVGK------TWTLYLKHVAEC 187

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  138 bits (351), Expect = 3e-39
 Identities = 56/207 (27%), Positives = 79/207 (38%), Gaps = 47/207 (22%)

Query: 147 FQC--RDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCG-KLYVSMPAYSMHLRTHNQI 203
           + C   DCG  Y+ +  L  H   H         T    G K +                
Sbjct: 13  YICSFADCGAAYNKNWKLQAHLCKH---------T----GEKPFP--------------- 44

Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCK--VCDKAFADKSNLRAHIQTHS--KVKP 259
           C+   C K F+    L  H  THTGEK F C    CD  F  K+N++ H       K+  
Sbjct: 45  CKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICV 104

Query: 260 FVC--EKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCK--VCDKAFADKSNLRAHI 315
           +VC  E CGKAF   + L  H+ S         + + P++C    CDK F+  S L+ H 
Sbjct: 105 YVCHFENCGKAFKKHNQLKVHQFSH--------TQQLPYECPHEGCDKRFSLPSRLKRHE 156

Query: 316 QTHSKVKPFVCEKCGKAFALKSYLYKH 342
           + H+       + C       +   KH
Sbjct: 157 KVHAGYPCKKDDSCSFVGKTWTLYLKH 183

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 77.6 bits (192), Expect = 8e-17
 Identities = 26/119 (21%), Positives = 39/119 (32%), Gaps = 17/119 (14%)

Query: 147 FQC--RDCGKHYSTSSNLARHRQIHRSPDDTKARTCP------QCGKLYVSMPAYSMHLR 198
           F C    C   ++T +N+ +H            + C        CGK +       +H  
Sbjct: 73  FTCDSDGCDLRFTTKANMKKHFNRF-----HNIKICVYVCHFENCGKAFKKHNQLKVHQF 127

Query: 199 THNQ----ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQT 253
           +H Q     C    C K FS P  L+ H + H G    K   C       +    H+  
Sbjct: 128 SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAE 186

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 4/37 (10%)

Query: 416 HLRTHNQ----ICQCPHCSKSFSRPWLLQGHIRTHTG 448
                      IC    C  ++++ W LQ H+  HTG
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTG 39

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  137 bits (348), Expect = 3e-39
 Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 34/179 (18%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQC 206
            +   C + + +   L  H        + K   C   G                     C
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG---------------------C 42

Query: 207 PHCSKSFSRPWLLQGHIRTHTGEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCE- 263
               + F   ++L  H+R HTGEKP KC    C K+++   NL+ H+++H+  KP++CE 
Sbjct: 43  SRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEH 102

Query: 264 -KCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKV--CDKAFADKSNLRAHIQTHS 319
             C KAF+  S   KH++        + S+EKP+ CK+  C K + D S+LR H++T  
Sbjct: 103 EGCSKAFSNASDRAKHQNR-------THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  108 bits (273), Expect = 2e-28
 Identities = 44/181 (24%), Positives = 70/181 (38%), Gaps = 48/181 (26%)

Query: 229 EKPFKCKVCDKAFADKSNLRAHIQT---HSKVKPFVCEKCG-----KAFALKSYLYKHED 280
           E   +   C + F  +  L  HI +   H + K FVC   G     + F  +  L  H  
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM- 59

Query: 281 SSCLKSYDSSSSEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCE--KCGKAFALK 336
                     + EKP KC    C K+++   NL+ H+++H+  KP++CE   C KAF+  
Sbjct: 60  -------RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNA 112

Query: 337 SYLYKHEDS--------SCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQI 388
           S   KH++          C                    +   C K Y+  S+L +H + 
Sbjct: 113 SDRAKHQNRTHSNEKPYVC--------------------KLPGCTKRYTDPSSLRKHVKT 152

Query: 389 H 389
            
Sbjct: 153 V 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  107 bits (269), Expect = 7e-28
 Identities = 49/259 (18%), Positives = 79/259 (30%), Gaps = 121/259 (46%)

Query: 204 CQCPHCSKSFSRPWLLQGHI---RTHTGEKPFKCKVCD-----KAFADKSNLRAHIQTHS 255
           C+   CS+ F     L  HI     H   K F C         + F  +  L  H++ H+
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 256 KVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKV--CDKAFADKSNLRA 313
                                                EKP KC    C K+++   NL+ 
Sbjct: 64  ------------------------------------GEKPHKCTFEGCRKSYSRLENLKT 87

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCG 373
           H+++H+  KP++CE  G                                         C 
Sbjct: 88  HLRSHTGEKPYMCEHEG-----------------------------------------CS 106

Query: 374 KHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQ----ICQCPHC 429
           K +S +S+ A+H                                RTH+     +C+ P C
Sbjct: 107 KAFSNASDRAKH------------------------------QNRTHSNEKPYVCKLPGC 136

Query: 430 SKSFSRPWLLQGHIRTHTG 448
           +K ++ P  L+ H++T  G
Sbjct: 137 TKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 54.1 bits (131), Expect = 5e-09
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 16/93 (17%)

Query: 147 FQC--RDCGKHYSTSSNLARHRQIHRSPDDT--KARTCPQ--CGKLYVSMPAYSMH-LRT 199
            +C    C K YS   NL  H + H     T  K   C    C K + +    + H  RT
Sbjct: 68  HKCTFEGCRKSYSRLENLKTHLRSH-----TGEKPYMCEHEGCSKAFSNASDRAKHQNRT 122

Query: 200 HNQ----ICQCPHCSKSFSRPWLLQGHIRTHTG 228
           H+     +C+ P C+K ++ P  L+ H++T  G
Sbjct: 123 HSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  135 bits (343), Expect = 7e-39
 Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 226 HTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLK 285
            +G    +C  C K F  K  L+ H + H+  KPF C KCGK +  K  L +HE      
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHE-----A 56

Query: 286 SYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
               + SE+ F C VC + F  +  LR H+ +H+   P+ C  C + F  K  L  H
Sbjct: 57  RNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  106 bits (268), Expect = 5e-28
 Identities = 33/134 (24%), Positives = 49/134 (36%), Gaps = 30/134 (22%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDT--KARTCPQCGKLYVSMPAYSMHLRTHNQIC 204
            +C  C K + +   L  H + H     T  K   CP+CGK Y        +L  H    
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKH-----TGEKPFECPKCGKCY----FRKENLLEH---- 54

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
                          +     +  E+ F C VC + F  +  LR H+ +H+   P+ C  
Sbjct: 55  ---------------EARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSS 99

Query: 265 CGKAFALKSYLYKH 278
           C + F  K  L  H
Sbjct: 100 CSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 92.2 bits (230), Expect = 1e-22
 Identities = 34/162 (20%), Positives = 52/162 (32%), Gaps = 52/162 (32%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCL---- 348
               +C  C K F  K  L+ H + H+  KPF C KCGK +  K  L +HE  +C+    
Sbjct: 5   SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE 64

Query: 349 KSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDT--KARTCPQCGKL 406
           + +                 C  C + +     L  H   H     T      C  C + 
Sbjct: 65  QVF----------------TCSVCQETFRRRMELRLHMVSH-----TGEMPYKCSSCSQQ 103

Query: 407 YVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTG 448
           +         L++H                      I+ H+G
Sbjct: 104 F----MQKKDLQSH---------------------MIKLHSG 120

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 60.6 bits (148), Expect = 1e-11
 Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 17/94 (18%)

Query: 147 FQCRDCGKHYSTSSNLARH---RQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI 203
           F+C  CGK Y    NL  H     ++RS    +  TC  C + +       M LR H   
Sbjct: 36  FECPKCGKCYFRKENLLEHEARNCMNRS---EQVFTCSVCQETF----RRRMELRLHMVS 88

Query: 204 ------CQCPHCSKSFSRPWLLQGH-IRTHTGEK 230
                  +C  CS+ F +   LQ H I+ H+G  
Sbjct: 89  HTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  117 bits (295), Expect = 5e-32
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 12/119 (10%)

Query: 221 GHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHED 280
           G     +G+K + C+ C K+F  KS    H+  H  ++P+ C  CGK F +K +L  H  
Sbjct: 1   GS-SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM- 57

Query: 281 SSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYL 339
                     +  KP++C +C K F  + +   H+   S  K +   K  +     S  
Sbjct: 58  -------KIHTGIKPYECNICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  111 bits (280), Expect = 6e-30
 Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 13/110 (11%)

Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
           CQC    KSF+       H+  H G +P+ C VC K F  K +L  H++ H+ +KP+ C 
Sbjct: 13  CQC---GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69

Query: 264 KCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRA 313
            C K F  +   ++H           +S  K ++    ++   + S   +
Sbjct: 70  ICAKRFMWRDSFHRH----------VTSCTKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 93.7 bits (234), Expect = 2e-23
 Identities = 30/131 (22%), Positives = 45/131 (34%), Gaps = 36/131 (27%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDT--KARTCPQCGKLYVSMPAYSMHLRTHNQIC 204
           + C  CGK ++  S   RH  +H        +   C  CG                    
Sbjct: 11  YPC-QCGKSFTHKSQRDRHMSMH-----LGLRPYGCGVCG-------------------- 44

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
                 K F     L GH++ HTG KP++C +C K F  + +   H+   S  K +   K
Sbjct: 45  ------KKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHV--TSCTKSYEAAK 96

Query: 265 CGKAFALKSYL 275
             +     S  
Sbjct: 97  AEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 68.6 bits (169), Expect = 1e-14
 Identities = 17/105 (16%), Positives = 28/105 (26%), Gaps = 35/105 (33%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDT--KARTCPQCGKLYVSMPAYSMHLRTHNQIC 204
           + C  CGK +    +L  H +IH     T  K   C  C                     
Sbjct: 38  YGCGVCGKKFKMKHHLVGHMKIH-----TGIKPYECNICA-------------------- 72

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRA 249
                 K F        H    +  K ++    ++   + S   +
Sbjct: 73  ------KRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 58.6 bits (143), Expect = 4e-11
 Identities = 27/147 (18%), Positives = 44/147 (29%), Gaps = 55/147 (37%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYD 352
           +K + C+ C K+F  KS    H+  H  ++P+ C  CGK F                   
Sbjct: 8   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKF------------------- 47

Query: 353 SSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDT--KARTCPQCGKLYVSM 410
                                       +L  H +IH     T  K   C  C K +  M
Sbjct: 48  ------------------------KMKHHLVGHMKIH-----TGIKPYECNICAKRF--M 76

Query: 411 PAYSMHLRTHN--QICQCPHCSKSFSR 435
              S H    +  +  +     ++ + 
Sbjct: 77  WRDSFHRHVTSCTKSYEAAKAEQNTTE 103

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 39.3 bits (93), Expect = 3e-04
 Identities = 19/84 (22%), Positives = 26/84 (30%), Gaps = 34/84 (40%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIHRSPDDT--KARTCPQCGKLYVSMPAYSMHLRTHNQIC 424
           + C  CGK ++  S   RH  +H        +   C  CG                    
Sbjct: 11  YPC-QCGKSFTHKSQRDRHMSMH-----LGLRPYGCGVCG-------------------- 44

Query: 425 QCPHCSKSFSRPWLLQGHIRTHTG 448
                 K F     L GH++ HTG
Sbjct: 45  ------KKFKMKHHLVGHMKIHTG 62

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  116 bits (293), Expect = 5e-32
 Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 8/102 (7%)

Query: 225 THTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCL 284
           +     P KC+VC K F+ K  L+ H++ H+ VKP+ C+ C  A A  S L KH      
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL----- 56

Query: 285 KSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
                 S E+PFKC++C  A  + S L  H+++H+       
Sbjct: 57  ---RIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  104 bits (262), Expect = 1e-27
 Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 8/94 (8%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
           +C  C K FSR   L+ H+R HTG KP+KCK CD A AD S+L  H++ HS  +PF C+ 
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69

Query: 265 CGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKC 298
           C  A    S L  H          S + +     
Sbjct: 70  CPYASRNSSQLTVHL--------RSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 88.3 bits (220), Expect = 9e-22
 Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 33/118 (27%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDT--KARTCPQCGKLYVSMPAYSMHLRTHNQIC 204
            +C  CGK +S    L  H + H     T  K   C  C                     
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCH-----TGVKPYKCKTCD-------------------- 43

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
                  + +    L  H+R H+ E+PFKC++C  A  + S L  H+++H+       
Sbjct: 44  ------YAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 69.0 bits (170), Expect = 6e-15
 Identities = 31/158 (19%), Positives = 48/158 (30%), Gaps = 76/158 (48%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYD 352
             P KC+VC K F+ K  L+ H++ H+ VKP+ C+ C  A                    
Sbjct: 6   SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAA------------------- 46

Query: 353 SSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDT--KARTCPQCGKLYVSM 410
                                   + SS+L +H +IH     +  +   C  C       
Sbjct: 47  ------------------------ADSSSLNKHLRIH-----SDERPFKCQICPY----- 72

Query: 411 PAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTG 448
                                +      L  H+R+HTG
Sbjct: 73  ---------------------ASRNSSQLTVHLRSHTG 89

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  115 bits (290), Expect = 3e-31
 Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 13/125 (10%)

Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC- 262
           C    C+K F     ++ H+ TH G +   C  C KAF + S L+ H   H+  KPF C 
Sbjct: 8   CPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 66

Query: 263 -EKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKV--CDKAFADKSNLRAHIQTHS 319
            E CGK F+L   L  H            + ++P+ C    C+K FA  +NL++HI TH+
Sbjct: 67  FEGCGKRFSLDFNLRTHVRIH--------TGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 118

Query: 320 KVKPF 324
           K K  
Sbjct: 119 KAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  106 bits (268), Expect = 5e-28
 Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 15/120 (12%)

Query: 229 EKPFKC--KVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKS 286
            +   C  K C K F D S +R H+ TH   +  VC +CGKAF   S L +H+       
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQ------- 54

Query: 287 YDSSSSEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVC--EKCGKAFALKSYLYKH 342
               + EKPF+C    C K F+   NLR H++ H+  +P+VC  + C K FA  + L  H
Sbjct: 55  -LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH 113

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  100 bits (252), Expect = 9e-26
 Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 20/126 (15%)

Query: 147 FQC--RDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI- 203
             C  + C K +  +S + +H   H      +   C +CGK +V     S  L+ H  + 
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTH----GPRVHVCAECGKAFV----ESSKLKRHQLVH 57

Query: 204 -------CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKV--CDKAFADKSNLRAHIQTH 254
                  C    C K FS  + L+ H+R HTG++P+ C    C+K FA  +NL++HI TH
Sbjct: 58  TGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

Query: 255 SKVKPF 260
           +K K  
Sbjct: 118 AKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 84.1 bits (209), Expect = 7e-20
 Identities = 47/167 (28%), Positives = 61/167 (36%), Gaps = 61/167 (36%)

Query: 293 EKPFKC--KVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH------ED 344
            +   C  K C K F D S +R H+ TH   +  VC +CGKAF   S L +H      E 
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLVHTGE- 60

Query: 345 SSCLKSYDSSSNGHLNKFTTISFQC--RDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQ 402
               K +                QC    CGK +S   NL  H +IH         T   
Sbjct: 61  ----KPF----------------QCTFEGCGKRFSLDFNLRTHVRIH---------T--- 88

Query: 403 CG-KLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTG 448
            G + YV               C    C+K F++   L+ HI TH  
Sbjct: 89  -GDRPYV---------------CPFDGCNKKFAQSTNLKSHILTHAK 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 72.5 bits (179), Expect = 9e-16
 Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 21/99 (21%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDT--KARTCP--QCGKLYVSMPAYSMHLRTHNQ 202
             C +CGK +  SS L RH+ +H     T  K   C    CGK +    +   +LRTH +
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVH-----TGEKPFQCTFEGCGKRF----SLDFNLRTHVR 85

Query: 203 I--------CQCPHCSKSFSRPWLLQGHIRTHTGEKPFK 233
           I        C    C+K F++   L+ HI TH   K  +
Sbjct: 86  IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  114 bits (288), Expect = 4e-31
 Identities = 33/108 (30%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 219 LQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 278
             G       +K F CK C + F    NL  H +TH+  +P+ C+ C KAF  + +L  H
Sbjct: 5   SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH 64

Query: 279 EDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
                       S EKPFKC+ C K F     L  H   H +      
Sbjct: 65  RYIH--------SKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 97.5 bits (244), Expect = 7e-25
 Identities = 37/142 (26%), Positives = 50/142 (35%), Gaps = 41/142 (28%)

Query: 159 SSNLARHRQIHRSPDDT--KARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRP 216
           SS  +  R           K   C  CG                          + F++ 
Sbjct: 2   SSGSSGGRLPS-----KTKKEFICKFCG--------------------------RHFTKS 30

Query: 217 WLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLY 276
           + L  H RTHT E+P+ C +C KAF  + +LR H   HSK KPF C++CGK F     L 
Sbjct: 31  YNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA 90

Query: 277 KHEDSSCLKSYDSSSSEKPFKC 298
            H+                   
Sbjct: 91  VHK--------TLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 85.9 bits (214), Expect = 9e-21
 Identities = 32/118 (27%), Positives = 43/118 (36%), Gaps = 33/118 (27%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDT--KARTCPQCGKLYVSMPAYSMHLRTHNQIC 204
           F C+ CG+H++ S NL  H + H     T  +  TC  C                     
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTH-----TDERPYTCDICH-------------------- 52

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
                 K+F R   L+ H   H+ EKPFKC+ C K F     L  H   H +      
Sbjct: 53  ------KAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 59.4 bits (145), Expect = 3e-11
 Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 17/90 (18%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIHRSPDDT--KARTCPQCGKLYVSMPAYSMHLRTHNQI- 423
           F C+ CG+H++ S NL  H + H     T  +  TC  C K +        HLR H  I 
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTH-----TDERPYTCDICHKAF----RRQDHLRDHRYIH 68

Query: 424 -----CQCPHCSKSFSRPWLLQGHIRTHTG 448
                 +C  C K F +   L  H   H  
Sbjct: 69  SKEKPFKCQECGKGFCQSRTLAVHKTLHMQ 98

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 45.1 bits (108), Expect = 2e-06
 Identities = 18/78 (23%), Positives = 26/78 (33%), Gaps = 17/78 (21%)

Query: 379 SSNLARHRQIHRSPDDT--KARTCPQCGKLYVSMPAYSMHLRTHNQI------CQCPHCS 430
           SS  +  R           K   C  CG+ +      S +L  H +         C  C 
Sbjct: 2   SSGSSGGRLPS-----KTKKEFICKFCGRHF----TKSYNLLIHERTHTDERPYTCDICH 52

Query: 431 KSFSRPWLLQGHIRTHTG 448
           K+F R   L+ H   H+ 
Sbjct: 53  KAFRRQDHLRDHRYIHSK 70

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  115 bits (290), Expect = 7e-31
 Identities = 47/163 (28%), Positives = 62/163 (38%), Gaps = 26/163 (15%)

Query: 151 DCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH--------NQ 202
             G            + I    +   +R    C + + +M     H+           N 
Sbjct: 2   SSGSSGQPIKQELSCKWID---EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNH 58

Query: 203 ICQ---CPHCSKSFSRPWLLQGHIRTHTGEKPFKCKV--CDKAFADKSNLRAHIQTHSKV 257
           +C    CP   KSF   + L  HIR HTGEKPF C    C K FA   NL+ H +TH+  
Sbjct: 59  VCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGE 118

Query: 258 KPFVC--EKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKC 298
           KPF C  E C + FA  S   KH            +S+K    
Sbjct: 119 KPFKCEFEGCDRRFANSSDRKKHM--------HVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  113 bits (285), Expect = 3e-30
 Identities = 40/147 (27%), Positives = 51/147 (34%), Gaps = 21/147 (14%)

Query: 209 CSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFV------- 261
              S                +     K CD+ F+    L  H+       P         
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 262 --CEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKV--CDKAFADKSNLRAHIQT 317
             C + GK+F  K  L  H            + EKPF C    C K FA   NL+ H +T
Sbjct: 63  EECPREGKSFKAKYKLVNHI--------RVHTGEKPFPCPFPGCGKIFARSENLKIHKRT 114

Query: 318 HSKVKPFVC--EKCGKAFALKSYLYKH 342
           H+  KPF C  E C + FA  S   KH
Sbjct: 115 HTGEKPFKCEFEGCDRRFANSSDRKKH 141

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  108 bits (273), Expect = 2e-28
 Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 12/128 (9%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIH------RSPDDTKARTCPQCGKLYVSMPAYSMHLRTH 200
              + C + +ST   L  H  +       ++        CP+ GK + +      H+R H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 201 NQ----ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKV--CDKAFADKSNLRAHIQTH 254
                  C  P C K F+R   L+ H RTHTGEKPFKC+   CD+ FA+ S+ + H+  H
Sbjct: 86  TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145

Query: 255 SKVKPFVC 262
           +  K    
Sbjct: 146 TSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 66.2 bits (162), Expect = 4e-13
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 10/92 (10%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIH------RSPDDTKARTCPQCGKLYVSMPAYSMHLRTH 420
              + C + +ST   L  H  +       ++        CP+ GK + +      H+R H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 421 NQ----ICQCPHCSKSFSRPWLLQGHIRTHTG 448
                  C  P C K F+R   L+ H RTHTG
Sbjct: 86  TGEKPFPCPFPGCGKIFARSENLKIHKRTHTG 117

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 56.5 bits (137), Expect = 7e-10
 Identities = 20/87 (22%), Positives = 31/87 (35%), Gaps = 11/87 (12%)

Query: 373 GKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH--------NQIC 424
           G   S+   + +        +   +R    C + + +M     H+           N +C
Sbjct: 1   GSSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 425 Q---CPHCSKSFSRPWLLQGHIRTHTG 448
               CP   KSF   + L  HIR HTG
Sbjct: 61  YWEECPREGKSFKAKYKLVNHIRVHTG 87

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  107 bits (269), Expect = 2e-28
 Identities = 45/137 (32%), Positives = 57/137 (41%), Gaps = 33/137 (24%)

Query: 147 FQC--RDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCG-KLYVSMPAYSMHLRTHNQI 203
           F C    C K Y   S+L  H + H         T    G K Y                
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKH---------T----GEKPYQ--------------- 38

Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
           C    C + FSR   L+ H R HTG KPF+CK C + F+   +L+ H +TH+  KPF C 
Sbjct: 39  CDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCR 98

Query: 264 K--CGKAFALKSYLYKH 278
              C K FA    L +H
Sbjct: 99  WPSCQKKFARSDELVRH 115

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 94.1 bits (235), Expect = 2e-23
 Identities = 38/175 (21%), Positives = 63/175 (36%), Gaps = 69/175 (39%)

Query: 227 TGEKPFKCK--VCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCL 284
           + ++PF C    C+K +   S+L+ H + H+                             
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHT----------------------------- 32

Query: 285 KSYDSSSSEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
                   EKP++C    C++ F+    L+ H + H+ VKPF C+ C + F+   +L  H
Sbjct: 33  -------GEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTH 85

Query: 343 ------EDSSCLKSYDSSSNGHLNKFTTISFQCR--DCGKHYSTSSNLARHRQIH 389
                 E     K +                 CR   C K ++ S  L RH  +H
Sbjct: 86  TRTHTGE-----KPF----------------SCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 81.0 bits (201), Expect = 7e-19
 Identities = 38/168 (22%), Positives = 61/168 (36%), Gaps = 60/168 (35%)

Query: 290 SSSEKPFKCK--VCDKAFADKSNLRAHIQTHSKVKPFVCEK--CGKAFALKSYLYKH--- 342
           +S ++PF C    C+K +   S+L+ H + H+  KP+ C+   C + F+    L +H   
Sbjct: 1   ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR 60

Query: 343 ---EDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKART 399
                    K +                QC+ C + +S S +L  H + H         T
Sbjct: 61  HTGV-----KPF----------------QCKTCQRKFSRSDHLKTHTRTH---------T 90

Query: 400 CPQCG-KLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTH 446
               G K +                C+ P C K F+R   L  H   H
Sbjct: 91  ----GEKPFS---------------CRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 80.3 bits (199), Expect = 2e-18
 Identities = 38/113 (33%), Positives = 48/113 (42%), Gaps = 35/113 (30%)

Query: 147 FQC--RDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCG-KLYVSMPAYSMHLRTHNQI 203
           +QC  +DC + +S S  L RH++ H     T        G K +                
Sbjct: 37  YQCDFKDCERRFSRSDQLKRHQRRH-----T--------GVKPF---------------- 67

Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKV--CDKAFADKSNLRAHIQTH 254
            QC  C + FSR   L+ H RTHTGEKPF C+   C K FA    L  H   H
Sbjct: 68  -QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 45.2 bits (108), Expect = 3e-06
 Identities = 24/85 (28%), Positives = 28/85 (32%), Gaps = 31/85 (36%)

Query: 367 FQC--RDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCG-KLYVSMPAYSMHLRTHNQI 423
           F C    C K Y   S+L  H + H         T    G K Y                
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKH---------T----GEKPYQ--------------- 38

Query: 424 CQCPHCSKSFSRPWLLQGHIRTHTG 448
           C    C + FSR   L+ H R HTG
Sbjct: 39  CDFKDCERRFSRSDQLKRHQRRHTG 63

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score =  102 bits (258), Expect = 4e-27
 Identities = 31/75 (41%), Positives = 45/75 (60%)

Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
           C    C + FS+   L  HIR HTG+KPF+C++C + F+   +L  HI+TH+  KPF C+
Sbjct: 7   CPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66

Query: 264 KCGKAFALKSYLYKH 278
            CG+ FA      +H
Sbjct: 67  ICGRKFARSDERKRH 81

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 84.4 bits (210), Expect = 2e-20
 Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 38/116 (32%)

Query: 229 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKS 286
           E+P+ C V  CD+ F+   +L  HI+ H+                               
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHT------------------------------- 30

Query: 287 YDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
                 +KPF+C++C + F+   +L  HI+TH+  KPF C+ CG+ FA      +H
Sbjct: 31  -----GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 81

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 83.3 bits (207), Expect = 5e-20
 Identities = 36/111 (32%), Positives = 48/111 (43%), Gaps = 33/111 (29%)

Query: 147 FQCR--DCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCG-KLYVSMPAYSMHLRTHNQI 203
           + C    C + +S S +L RH +IH         T    G K +                
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIH---------T----GQKPF---------------- 35

Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTH 254
            QC  C ++FSR   L  HIRTHTGEKPF C +C + FA     + H + H
Sbjct: 36  -QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 62.9 bits (154), Expect = 9e-13
 Identities = 32/160 (20%), Positives = 48/160 (30%), Gaps = 78/160 (48%)

Query: 293 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKS 350
           E+P+ C V  CD+ F+   +L  HI+ H+  KPF                          
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPF-------------------------- 35

Query: 351 YDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDT--KARTCPQCGKLYV 408
                            QCR C +++S S +L  H + H     T  K   C  CG    
Sbjct: 36  -----------------QCRICMRNFSRSDHLTTHIRTH-----TGEKPFACDICG---- 69

Query: 409 SMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTG 448
                                 + F+R    + H + H  
Sbjct: 70  ----------------------RKFARSDERKRHTKIHLR 87

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score =  102 bits (257), Expect = 5e-27
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
           QC  C ++FSR   L  HIRTHTGEKPF C +C + FA     + H        P + +K
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDK 63

Query: 265 CGKAFALKSYLYKH 278
             +  +   +L   
Sbjct: 64  VEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 88.3 bits (220), Expect = 7e-22
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 12/92 (13%)

Query: 230 KPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDS 289
           KPF+C++C + F+   +L  HI+TH+  KPF C+ CG+ FA      +H D         
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD--------- 52

Query: 290 SSSEKPFKCKVCDKAFADKSNLRAHIQ---TH 318
                P      ++  +   +L   +      
Sbjct: 53  IQHILPILEDKVEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 84.1 bits (209), Expect = 2e-20
 Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 9/86 (10%)

Query: 257 VKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQ 316
           +KPF C  C + F+   +L  H          + + EKPF C +C + FA     + H  
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHI--------RTHTGEKPFACDICGRKFARSDERKRHRD 52

Query: 317 THSKVKPFVCEKCGKAFALKSYLYKH 342
                 P + +K  +  +   +L   
Sbjct: 53  IQHI-LPILEDKVEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 77.9 bits (193), Expect = 4e-18
 Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 16/97 (16%)

Query: 294 KPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDS 353
           KPF+C++C + F+   +L  HI+TH+  KPF C+ CG+ FA      +H D         
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI-------- 53

Query: 354 SSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHR 390
                               +  S + +L       +
Sbjct: 54  ----QHIL----PILEDKVEELLSKNYHLENEVARLK 82

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 75.2 bits (186), Expect = 3e-17
 Identities = 20/112 (17%), Positives = 34/112 (30%), Gaps = 35/112 (31%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCG-KLYVSMPAYSMHLRTHNQICQ 205
           FQCR C +++S S +L  H + H     T        G K +                  
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTH-----T--------GEKPF-----------------A 33

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQ---TH 254
           C  C + F+R    + H        P      ++  +   +L   +      
Sbjct: 34  CDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 62.9 bits (154), Expect = 9e-13
 Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 19/92 (20%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIHRSPDDT--KARTCPQCGKLYVSMPAYSMHLRTHNQI- 423
           FQCR C +++S S +L  H + H     T  K   C  CG+ +    A S   + H  I 
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTH-----TGEKPFACDICGRKF----ARSDERKRHRDIQ 54

Query: 424 ----CQCPHCSKSFSRPWLL---QGHIRTHTG 448
                      +  S+ + L      ++   G
Sbjct: 55  HILPILEDKVEELLSKNYHLENEVARLKKLVG 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score =  101 bits (253), Expect = 2e-26
 Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 7/95 (7%)

Query: 226 HTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLK 285
            +G     C++C K F D  +L  H  +HS  KP+ C  CG  F  K  +  H       
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH------V 55

Query: 286 SYDSSSSEKPFKCKVCDKAFADKSNLRAHIQ-THS 319
                S  KP+ C+ C K F+   +L  HI+  HS
Sbjct: 56  RSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 96.4 bits (241), Expect = 1e-24
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHS--KVKPFVC 262
            C  C K F   + L  H  +H+GEKP+ C VC   F  K  +  H+++H     KP++C
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68

Query: 263 EKCGKAFALKSYLYKH 278
           + CGK F+   +L  H
Sbjct: 69  QSCGKGFSRPDHLNGH 84

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 83.3 bits (207), Expect = 5e-20
 Identities = 29/101 (28%), Positives = 40/101 (39%), Gaps = 20/101 (19%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHE---DSSCLK 349
                C++C K F D  +L  H  +HS  KP+ C  CG  F  K  +  H    D S  K
Sbjct: 5   SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK 64

Query: 350 SYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQ-IH 389
            Y                 C+ CGK +S   +L  H + +H
Sbjct: 65  PY----------------ICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 79.1 bits (196), Expect = 2e-18
 Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 36/114 (31%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDT--KARTCPQCGKLYVSMPAYSMHLRTHNQIC 204
             C  CGK +    +L RH+  H     +  K  +CP CG                    
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSH-----SGEKPYSCPVCG-------------------- 42

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGE--KPFKCKVCDKAFADKSNLRAHIQ-THS 255
                   F R   +  H+R+H G   KP+ C+ C K F+   +L  HI+  HS
Sbjct: 43  ------LRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 19/84 (22%), Positives = 27/84 (32%), Gaps = 33/84 (39%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIHRSPDDT--KARTCPQCGKLYVSMPAYSMHLRTHNQIC 424
             C  CGK +    +L RH+  H     +  K  +CP CG                    
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSH-----SGEKPYSCPVCG-------------------- 42

Query: 425 QCPHCSKSFSRPWLLQGHIRTHTG 448
                   F R   +  H+R+H G
Sbjct: 43  ------LRFKRKDRMSYHVRSHDG 60

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 99.1 bits (248), Expect = 9e-26
 Identities = 25/115 (21%), Positives = 34/115 (29%), Gaps = 32/115 (27%)

Query: 219 LQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 278
                RTHTGEKP+ C  CDK F  K  L  H + +                        
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH----------------------- 39

Query: 279 EDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAF 333
                    D +     F C  C K F  ++ +  H    +       E  G + 
Sbjct: 40  ---------DPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 86.0 bits (214), Expect = 5e-21
 Identities = 16/84 (19%), Positives = 27/84 (32%), Gaps = 10/84 (11%)

Query: 196 HLRTHNQI------CQCPHCSKSFSRPWLLQGHIRTHTGE----KPFKCKVCDKAFADKS 245
              +  +         C HC K+F +  LL  H + +         F C  C K F  ++
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 246 NLRAHIQTHSKVKPFVCEKCGKAF 269
            +  H    +       E  G + 
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 74.1 bits (183), Expect = 1e-16
 Identities = 14/96 (14%), Positives = 25/96 (26%), Gaps = 27/96 (28%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIH-RSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQ 205
           + C  C K +     L  H + +        A  C +CG                     
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCG--------------------- 54

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAF 241
                K+F+R   +  H     G    + +    + 
Sbjct: 55  -----KTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 62.2 bits (152), Expect = 1e-12
 Identities = 20/101 (19%), Positives = 32/101 (31%), Gaps = 24/101 (23%)

Query: 310 NLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHE-----DSSCLKSYDSSSNGHLNKFTT 364
           +  +  +TH+  KP+ C  C K F  K  L  H       +    ++             
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAF------------- 48

Query: 365 ISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGK 405
               C  CGK ++  + +ARH      P           G 
Sbjct: 49  ---VCSKCGKTFTRRNTMARHADNCAGP---DGVEGENSGP 83

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 49.8 bits (120), Expect = 3e-08
 Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 27/83 (32%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIH-RSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQ 425
           + C  C K +     L  H + +        A  C +CG                     
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCG--------------------- 54

Query: 426 CPHCSKSFSRPWLLQGHIRTHTG 448
                K+F+R   +  H     G
Sbjct: 55  -----KTFTRRNTMARHADNCAG 72

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 97.6 bits (244), Expect = 4e-25
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 198 RTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKV--CDKAFADKSNLRAHIQTHS 255
           RT    C    C K++++   L+ H+RTHTGEKP+ C    C   FA    L  H + H+
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 256 KVKPFVCEKCGKAFALKSYLYKH 278
             +PF C+KC +AF+   +L  H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALH 84

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 82.6 bits (205), Expect = 1e-19
 Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 4/80 (5%)

Query: 179 TCPQCGKLYVSMPAYSMHLRTHNQ----ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
               CGK Y        HLRTH       C    C   F+R   L  H R HTG +PF+C
Sbjct: 9   DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC 68

Query: 235 KVCDKAFADKSNLRAHIQTH 254
           + CD+AF+   +L  H++ H
Sbjct: 69  QKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 79.1 bits (196), Expect = 1e-18
 Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 34/117 (29%)

Query: 226 HTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLK 285
            T         C K +   S+L+AH++TH+  KP+ C+  G                   
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDG------------------- 42

Query: 286 SYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
                          C   FA    L  H + H+  +PF C+KC +AF+   +L  H
Sbjct: 43  ---------------CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALH 84

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 65.6 bits (161), Expect = 1e-13
 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 17/99 (17%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC--EKCGKAFALKSYLYKHEDSSCLKS 350
                   C K +   S+L+AH++TH+  KP+ C  + CG  FA    L +H        
Sbjct: 5   THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK----- 59

Query: 351 YDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIH 389
                  H        FQC+ C + +S S +LA H + H
Sbjct: 60  -------HTGH---RPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 46.0 bits (110), Expect = 8e-07
 Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 4/54 (7%)

Query: 399 TCPQCGKLYVSMPAYSMHLRTHNQ----ICQCPHCSKSFSRPWLLQGHIRTHTG 448
               CGK Y        HLRTH       C    C   F+R   L  H R HTG
Sbjct: 9   DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG 62

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 418 RTHNQICQCPHCSKSFSRPWLLQGHIRTHTG 448
           RT    C    C K++++   L+ H+RTHTG
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTG 32

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 96.9 bits (242), Expect = 8e-25
 Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 196 HLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC--KVCDKAFADKSNLRAHIQT 253
             R H   C  P C+K +++   L+ H+RTHTGEKP+KC  + CD  FA    L  H + 
Sbjct: 12  KRRIH--YCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK 69

Query: 254 HSKVKPFVCEKCGKAFALKSYLYKH 278
           H+  KPF C  C ++F+   +L  H
Sbjct: 70  HTGAKPFQCGVCNRSFSRSDHLALH 94

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 85.4 bits (212), Expect = 1e-20
 Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 11/102 (10%)

Query: 157 STSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQ----ICQCPHCSKS 212
            +S      R+IH           P C K+Y        HLRTH       C    C   
Sbjct: 4   GSSGPDLEKRRIHYCD-------YPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWR 56

Query: 213 FSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTH 254
           F+R   L  H R HTG KPF+C VC+++F+   +L  H++ H
Sbjct: 57  FARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 78.4 bits (194), Expect = 3e-18
 Identities = 31/131 (23%), Positives = 45/131 (34%), Gaps = 38/131 (29%)

Query: 212 SFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFAL 271
           S           R H  + P     C K +   S+L+AH++TH+  KP+ C   G     
Sbjct: 2   SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEG----- 52

Query: 272 KSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGK 331
                                        CD  FA    L  H + H+  KPF C  C +
Sbjct: 53  -----------------------------CDWRFARSDELTRHYRKHTGAKPFQCGVCNR 83

Query: 332 AFALKSYLYKH 342
           +F+   +L  H
Sbjct: 84  SFSRSDHLALH 94

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 53.0 bits (128), Expect = 3e-09
 Identities = 33/165 (20%), Positives = 49/165 (29%), Gaps = 72/165 (43%)

Query: 285 KSYDSSSSEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
            S       +   C    C K +   S+L+AH++TH+  KP+ C   G            
Sbjct: 5   SSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEG------------ 52

Query: 343 EDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQ 402
                                        C   ++ S  L RH + H     T A     
Sbjct: 53  -----------------------------CDWRFARSDELTRHYRKH-----TGA----- 73

Query: 403 CGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHT 447
             K +                 QC  C++SFSR   L  H++ H 
Sbjct: 74  --KPF-----------------QCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 23/76 (30%), Positives = 27/76 (35%), Gaps = 11/76 (14%)

Query: 377 STSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQ----ICQCPHCSKS 432
            +S      R+IH           P C K+Y        HLRTH       C    C   
Sbjct: 4   GSSGPDLEKRRIHYCD-------YPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWR 56

Query: 433 FSRPWLLQGHIRTHTG 448
           F+R   L  H R HTG
Sbjct: 57  FARSDELTRHYRKHTG 72

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 11/82 (13%)

Query: 152 CGKHYSTSSNLARHRQIHRSPDDTKAR----TCPQCGKLYVSMPAYSMHLRTHNQI--CQ 205
           C K Y+ SS+L  H + H     T  +    T   C   +      + H R H      Q
Sbjct: 23  CTKVYTKSSHLKAHLRTH-----TGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQ 77

Query: 206 CPHCSKSFSRPWLLQGHIRTHT 227
           C  C++SFSR   L  H++ H 
Sbjct: 78  CGVCNRSFSRSDHLALHMKRHQ 99

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 92.2 bits (230), Expect = 2e-23
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 219 LQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHS--KVKPFVCEKCGKAFALKSYLY 276
                RTH+GEKP++C +C   F     ++ HI       V  F C  C    A KS L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 277 KH 278
            H
Sbjct: 63  VH 64

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 76.0 bits (188), Expect = 1e-17
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGE--KPFKCKVCDKAFADKSNLRAHI 251
             RTH+  +  +C  C   F++   ++ HI     E    F C  CD   A KS+L  H+
Sbjct: 6   SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65

Query: 252 QT-HSKVKPF 260
           +  HS   P 
Sbjct: 66  RKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 72.9 bits (180), Expect = 2e-16
 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHS--KVKPFVCEKCGKAFALKSYLYKH 342
           EKP++C +C   F     ++ HI       V  F C  C    A KS L  H
Sbjct: 13  EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVH 64

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 54.5 bits (132), Expect = 7e-10
 Identities = 14/87 (16%), Positives = 25/87 (28%), Gaps = 28/87 (32%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQC 206
           ++C  C   ++ S  +  H     +          +    +                  C
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHT----------ENVAKF-----------------HC 48

Query: 207 PHCSKSFSRPWLLQGHIRT-HTGEKPF 232
           PHC    +R   L  H+R  H+   P 
Sbjct: 49  PHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 17/81 (20%), Positives = 26/81 (32%), Gaps = 14/81 (17%)

Query: 310 NLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQC 369
           +  +  +THS  KP+ C  C   F     +  H             +          F C
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHI---------LQKHTENVA----KFHC 48

Query: 370 RDCGKHYSTSSNLARH-RQIH 389
             C    +  S+L  H R+ H
Sbjct: 49  PHCDTVIARKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 46.7 bits (112), Expect = 4e-07
 Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 12/75 (16%)

Query: 381 NLARHRQIHRSPDDT--KARTCPQCGKLYVSMPAYSMHLRTHNQIC----QCPHCSKSFS 434
           +     + H     +  K   C  C   +       MH+   +        CPHC    +
Sbjct: 2   SSGSSGRTH-----SGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIA 56

Query: 435 RPWLLQGHIRT-HTG 448
           R   L  H+R  H+ 
Sbjct: 57  RKSDLGVHLRKQHSY 71

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 92.1 bits (230), Expect = 3e-23
 Identities = 29/74 (39%), Positives = 40/74 (54%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
            C  C KSF R   L  H+  H+  +P+ C+ C K F  KS+++ H   H+  KP  C+ 
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62

Query: 265 CGKAFALKSYLYKH 278
           CGKAF+  S L  H
Sbjct: 63  CGKAFSQSSNLITH 76

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 81.7 bits (203), Expect = 2e-19
 Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 8/87 (9%)

Query: 232 FKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSS 291
           F CK+C K+F   S L  H+  HS  +P+ C+ CGK F  KS + KH            +
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT--------FIHT 53

Query: 292 SEKPFKCKVCDKAFADKSNLRAHIQTH 318
            EKP KC+VC KAF+  SNL  H + H
Sbjct: 54  GEKPHKCQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 80.5 bits (200), Expect = 4e-19
 Identities = 38/109 (34%), Positives = 48/109 (44%), Gaps = 29/109 (26%)

Query: 146 SFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQ 205
           SF C+ CGK +  SS L+ H  IH    DT+   C  CG                     
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIH---SDTRPYPCQYCG--------------------- 36

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTH 254
                K F +   ++ H   HTGEKP KC+VC KAF+  SNL  H + H
Sbjct: 37  -----KRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 77.1 bits (191), Expect = 7e-18
 Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 8/83 (9%)

Query: 260 FVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHS 319
           F C+ CGK+F   S L  H            S  +P+ C+ C K F  KS+++ H   H+
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIH--------SDTRPYPCQYCGKRFHQKSDMKKHTFIHT 53

Query: 320 KVKPFVCEKCGKAFALKSYLYKH 342
             KP  C+ CGKAF+  S L  H
Sbjct: 54  GEKPHKCQVCGKAFSQSSNLITH 76

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 59.0 bits (144), Expect = 2e-11
 Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 13/89 (14%)

Query: 366 SFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI-- 423
           SF C+ CGK +  SS L+ H  IH    DT+   C  CGK +         ++ H  I  
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIH---SDTRPYPCQYCGKRF----HQKSDMKKHTFIHT 53

Query: 424 ----CQCPHCSKSFSRPWLLQGHIRTHTG 448
                +C  C K+FS+   L  H R HTG
Sbjct: 54  GEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 90.3 bits (225), Expect = 1e-22
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 204 CQCPHCSKSFSRPWLLQGHIR-THTGEKPFKCK--VCDKAFADKSNLRAHIQTHSKVKPF 260
           C  P C + FS    L  H +  H  +K F C    C K+F  K +L+ H++ HS  + +
Sbjct: 10  CDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDY 69

Query: 261 VCEKCGKAF 269
           +CE  G + 
Sbjct: 70  ICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 82.6 bits (205), Expect = 7e-20
 Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 37/111 (33%)

Query: 226 HTGEKPFKCKV--CDKAFADKSNLRAHI-QTHSKVKPFVCEKCGKAFALKSYLYKHEDSS 282
            +G     C    C + F+++  L  H    H   K F C +                  
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPA---------------- 45

Query: 283 CLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAF 333
                             C K+F  K +L+ H++ HS  + ++CE  G + 
Sbjct: 46  ------------------CGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 66.8 bits (164), Expect = 3e-14
 Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 13/72 (18%)

Query: 179 TCPQCGKLYVSMPAYSMHLRTHNQI---------CQCPHCSKSFSRPWLLQGHIRTHTGE 229
             P CG+++    +   +L  H +          C  P C KSF+    L+ H++ H+  
Sbjct: 11  DFPGCGRIF----SNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDT 66

Query: 230 KPFKCKVCDKAF 241
           + + C+    + 
Sbjct: 67  RDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 55.2 bits (134), Expect = 3e-10
 Identities = 19/116 (16%), Positives = 30/116 (25%), Gaps = 47/116 (40%)

Query: 293 EKPFKCKV--CDKAFADKSNLRAHI-QTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLK 349
                C    C + F+++  L  H    H   K F C +                     
Sbjct: 5   SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPA------------------- 45

Query: 350 SYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGK 405
                                 CGK ++   +L  H ++H    DT+   C   G 
Sbjct: 46  ----------------------CGKSFNFKKHLKEHMKLHS---DTRDYICEFSGP 76

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 13/59 (22%)

Query: 399 TCPQCGKLYVSMPAYSMHLRTHNQI---------CQCPHCSKSFSRPWLLQGHIRTHTG 448
             P CG+++    +   +L  H +          C  P C KSF+    L+ H++ H+ 
Sbjct: 11  DFPGCGRIF----SNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 37.5 bits (88), Expect = 7e-04
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 5/41 (12%)

Query: 147 FQC--RDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGK 185
           F C    CGK ++   +L  H ++H    DT+   C   G 
Sbjct: 39  FSCPEPACGKSFNFKKHLKEHMKLHS---DTRDYICEFSGP 76

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 86.5 bits (215), Expect = 3e-21
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)

Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFV 261
           C   +C K+F +   L+ H  +HT + P++C    CDK F+  S L+ H + H+      
Sbjct: 4   CHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKK 63

Query: 262 CEKCGKAFALKSYLYKH 278
            + C       +   KH
Sbjct: 64  DDSCSFVGKTWTLYLKH 80

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 69.2 bits (170), Expect = 4e-15
 Identities = 20/81 (24%), Positives = 27/81 (33%), Gaps = 5/81 (6%)

Query: 179 TCPQCGKLYVSMPAYSMHLRTHNQ----ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
               CGK +       +H  +H Q     C    C K FS P  L+ H + H G    K 
Sbjct: 5   HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64

Query: 235 KVCDKAFADKSNLRAHIQ-TH 254
             C       +    H+   H
Sbjct: 65  DSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 62.3 bits (152), Expect = 1e-12
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 10/83 (12%)

Query: 262 CEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKV--CDKAFADKSNLRAHIQTHS 319
            E CGKAF   + L  H+ S         + + P++C    CDK F+  S L+ H + H+
Sbjct: 6   FENCGKAFKKHNQLKVHQFSH--------TQQLPYECPHEGCDKRFSLPSRLKRHEKVHA 57

Query: 320 KVKPFVCEKCGKAFALKSYLYKH 342
                  + C       +   KH
Sbjct: 58  GYPCKKDDSCSFVGKTWTLYLKH 80

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 51.9 bits (125), Expect = 6e-09
 Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 18/98 (18%)

Query: 296 FKCKV--CDKAFADKSNLRAHIQTHSKVKPFVC--EKCGKAFALKSYLYKHEDSSCLKSY 351
           + C    C KAF   + L+ H  +H++  P+ C  E C K F+L S L +HE        
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV------ 55

Query: 352 DSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIH 389
                 H          C   GK ++    L    + H
Sbjct: 56  ------HAGYPCKKDDSCSFVGKTWTLY--LKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 399 TCPQCGKLYVSMPAYSMHLRTHNQ----ICQCPHCSKSFSRPWLLQGHIRTHTG 448
               CGK +       +H  +H Q     C    C K FS P  L+ H + H G
Sbjct: 5   HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 40.7 bits (96), Expect = 5e-05
 Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 4/56 (7%)

Query: 147 FQC--RDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH 200
           ++C    C K +S  S L RH ++H      K  +C   GK +     +      H
Sbjct: 32  YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH--VAECH 85

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 86.0 bits (214), Expect = 4e-21
 Identities = 20/60 (33%), Positives = 27/60 (45%)

Query: 219 LQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 278
              H      +KP+KC  C  +F  K NL +H   H+  KP+ C  CG  F   + L  H
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 75.2 bits (186), Expect = 3e-17
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 6/73 (8%)

Query: 194 SMHLRTHNQI------CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNL 247
             H   H+ +       +C  C  SF     L  H   HTGEKP++C +C   F   +NL
Sbjct: 2   GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANL 61

Query: 248 RAHIQTHSKVKPF 260
           + H + HS  KP+
Sbjct: 62  KTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 69.4 bits (171), Expect = 3e-15
 Identities = 19/50 (38%), Positives = 26/50 (52%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +KP+KC  C  +F  K NL +H   H+  KP+ C  CG  F   + L  H
Sbjct: 15  DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 51.7 bits (125), Expect = 6e-09
 Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 31/87 (35%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCG-KLYVSMPAYSMHLRTHNQICQ 205
           ++C  C   +    NLA H+ +H              G K Y                 +
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVH-------------TGEKPY-----------------R 47

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPF 232
           C  C   F+RP  L+ H R H+GEKP+
Sbjct: 48  CNICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 46.7 bits (112), Expect = 4e-07
 Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 17/78 (21%)

Query: 379 SSNLARHRQIHRSPDDT--KARTCPQCGKLYVSMPAYSMHLRTHNQI------CQCPHCS 430
             +   H  +         K   C +C   +     Y  +L +H  +       +C  C 
Sbjct: 2   GHHHHHHSHMT-----HSDKPYKCDRCQASF----RYKGNLASHKTVHTGEKPYRCNICG 52

Query: 431 KSFSRPWLLQGHIRTHTG 448
             F+RP  L+ H R H+G
Sbjct: 53  AQFNRPANLKTHTRIHSG 70

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 84.1 bits (209), Expect = 2e-20
 Identities = 17/55 (30%), Positives = 24/55 (43%)

Query: 224 RTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 278
            + +   P KC  C  + + K+ LR H + H   +PF C  C       S L KH
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH 56

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 74.5 bits (184), Expect = 4e-17
 Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC 265
           C  CS S S    L+ H R H  ++PFKC  C       SNL  H++             
Sbjct: 12  CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS--GPSS 69

Query: 266 G 266
           G
Sbjct: 70  G 70

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 71.8 bits (177), Expect = 4e-16
 Identities = 19/52 (36%), Positives = 24/52 (46%)

Query: 291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           SS  P KC  C  + + K+ LR H + H   +PF C  C       S L KH
Sbjct: 5   SSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH 56

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 47.9 bits (115), Expect = 9e-08
 Identities = 15/89 (16%), Positives = 28/89 (31%), Gaps = 31/89 (34%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCG-KLYVSMPAYSMHLRTHNQICQ 205
            +C +C    S+ + L  H +IH             C  + +                 +
Sbjct: 10  EKCSECSYSCSSKAALRIHERIH-------------CTDRPF-----------------K 39

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           C +CS    +P  L  H++   G+     
Sbjct: 40  CNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 15/94 (15%), Positives = 28/94 (29%), Gaps = 32/94 (34%)

Query: 317 THSKVKPFVCEKCGKAFALKSYLYKH------EDSSCLKSYDSSSNGHLNKFTTISFQCR 370
           + S   P  C +C  + + K+ L  H      +     + +                +C 
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCTD-----RPF----------------KCN 41

Query: 371 DCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCG 404
            C       SNL++H +           + P  G
Sbjct: 42  YCSFDTKQPSNLSKHMKKF-----HGDMSGPSSG 70

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 31/83 (37%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCG-KLYVSMPAYSMHLRTHNQICQ 425
            +C +C    S+ + L  H +IH             C  + +                 +
Sbjct: 10  EKCSECSYSCSSKAALRIHERIH-------------CTDRPF-----------------K 39

Query: 426 CPHCSKSFSRPWLLQGHIRTHTG 448
           C +CS    +P  L  H++   G
Sbjct: 40  CNYCSFDTKQPSNLSKHMKKFHG 62

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 83.8 bits (208), Expect = 2e-20
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 224 RTHTGEKPFKCKVCDKAFADKSNLRAHIQT--HSKVKPFVCEKCGKAFALKSYLYKHE 279
            T  GE  ++CKVC + +   SN   H  T     VK + C  C K F  K  +  H 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 73.7 bits (182), Expect = 8e-17
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 205 QCPHCSKSFSRPWLLQGHIRT--HTGEKPFKCKVCDKAFADKSNLRAHIQTHSKV 257
           +C  CS+ ++       H  T      K + C  C K F  K N+ AH++   K+
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 70.3 bits (173), Expect = 1e-15
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQT--HSKVKPFVCEKCGKAFALKSYLYKHE 343
           E  ++CKVC + +   SN   H  T     VK + C  C K F  K  +  H 
Sbjct: 8   EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 49.9 bits (120), Expect = 2e-08
 Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 27/82 (32%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQC 206
           ++C+ C + Y+  SN  RH       +           K+Y                  C
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNV----------KVY-----------------PC 43

Query: 207 PHCSKSFSRPWLLQGHIRTHTG 228
           P C K F+R   +  H++    
Sbjct: 44  PFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 49.9 bits (120), Expect = 2e-08
 Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 27/82 (32%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQC 426
           ++C+ C + Y+  SN  RH       +           K+Y                  C
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNV----------KVY-----------------PC 43

Query: 427 PHCSKSFSRPWLLQGHIRTHTG 448
           P C K F+R   +  H++    
Sbjct: 44  PFCFKEFTRKDNMTAHVKIIHK 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 80.6 bits (200), Expect = 3e-19
 Identities = 26/61 (42%), Positives = 35/61 (57%)

Query: 219 LQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 278
             G    H+GEKP+ C  C KAF+  S L  H + H+  KP+ C +CGKAF+  S L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 279 E 279
           +
Sbjct: 62  Q 62

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 68.7 bits (169), Expect = 5e-15
 Identities = 25/56 (44%), Positives = 31/56 (55%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPF 260
            C  C K+FSR  +L  H R HTGEKP+KC  C KAF+  S L  H + H+     
Sbjct: 16  GCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 65.6 bits (161), Expect = 6e-14
 Identities = 23/51 (45%), Positives = 31/51 (60%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
           EKP+ C  C KAF+  S L  H + H+  KP+ C +CGKAF+  S L  H+
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ 62

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 53.6 bits (130), Expect = 1e-09
 Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 27/85 (31%)

Query: 311 LRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH------EDSSCLKSYDSSSNGHLNKFTT 364
                  HS  KP+ C +CGKAF+  S L +H      E     K Y             
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE-----KPY------------- 43

Query: 365 ISFQCRDCGKHYSTSSNLARHRQIH 389
              +C +CGK +S +S L  H++IH
Sbjct: 44  ---KCLECGKAFSQNSGLINHQRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 50.9 bits (123), Expect = 9e-09
 Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 31/87 (35%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCG-KLYVSMPAYSMHLRTHNQICQ 205
           + C +CGK +S SS L +H+++H              G K Y                 +
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHT-------------GEKPY-----------------K 44

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPF 232
           C  C K+FS+   L  H R HT     
Sbjct: 45  CLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 31/83 (37%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCG-KLYVSMPAYSMHLRTHNQICQ 425
           + C +CGK +S SS L +H+++H              G K Y                 +
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHT-------------GEKPY-----------------K 44

Query: 426 CPHCSKSFSRPWLLQGHIRTHTG 448
           C  C K+FS+   L  H R HT 
Sbjct: 45  CLECGKAFSQNSGLINHQRIHTS 67

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 80.6 bits (200), Expect = 3e-19
 Identities = 21/60 (35%), Positives = 33/60 (55%)

Query: 219 LQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 278
                      + +KC  C K+F+  S+L  H +TH+  KP+ C++CGKAF  +S+L  H
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 69.0 bits (170), Expect = 4e-15
 Identities = 27/56 (48%), Positives = 33/56 (58%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPF 260
           +C  C KSFS    L  H RTHTGEKP+KC  C KAF  +S+L  H + H+   P 
Sbjct: 20  KCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 67.1 bits (165), Expect = 2e-14
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 8/83 (9%)

Query: 242 ADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVC 301
               +         + + + C++CGK+F+  S L KH          + + EKP+KC  C
Sbjct: 1   GSSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHR--------RTHTGEKPYKCDEC 52

Query: 302 DKAFADKSNLRAHIQTHSKVKPF 324
            KAF  +S+L  H + H+   P 
Sbjct: 53  GKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 65.5 bits (161), Expect = 8e-14
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
            + +KC  C K+F+  S+L  H +TH+  KP+ C++CGKAF  +S+L  H
Sbjct: 16  RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 56.7 bits (138), Expect = 1e-10
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 13/81 (16%)

Query: 159 SSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI------CQCPHCSKS 212
           S +  R     R     +   C +CGK +    ++S  L  H +        +C  C K+
Sbjct: 3   SGSSGRSEWQQRE---RRRYKCDECGKSF----SHSSDLSKHRRTHTGEKPYKCDECGKA 55

Query: 213 FSRPWLLQGHIRTHTGEKPFK 233
           F +   L GH R HTG  P  
Sbjct: 56  FIQRSHLIGHHRVHTGSGPSS 76

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 55.9 bits (136), Expect = 2e-10
 Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 27/90 (30%)

Query: 306 ADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH------EDSSCLKSYDSSSNGHL 359
               +         + + + C++CGK+F+  S L KH      E     K Y        
Sbjct: 1   GSSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE-----KPY-------- 47

Query: 360 NKFTTISFQCRDCGKHYSTSSNLARHRQIH 389
                   +C +CGK +   S+L  H ++H
Sbjct: 48  --------KCDECGKAFIQRSHLIGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.5 bits (109), Expect = 8e-07
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 13/76 (17%)

Query: 379 SSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI------CQCPHCSKS 432
           S +  R     R     +   C +CGK +    ++S  L  H +        +C  C K+
Sbjct: 3   SGSSGRSEWQQRE---RRRYKCDECGKSF----SHSSDLSKHRRTHTGEKPYKCDECGKA 55

Query: 433 FSRPWLLQGHIRTHTG 448
           F +   L GH R HTG
Sbjct: 56  FIQRSHLIGHHRVHTG 71

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 80.1 bits (198), Expect = 6e-19
 Identities = 17/110 (15%), Positives = 32/110 (29%), Gaps = 34/110 (30%)

Query: 226 HTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLK 285
            +G    +C++C      K++L  H + H++                             
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETV--------------------------- 34

Query: 286 SYDSSSSEKPFKCKVCDKAFADKSNLRAHIQT-HSKVKPFVCEKCGKAFA 334
                 +   F C+ C K F    ++ AH    H  +     E  G +  
Sbjct: 35  ------AALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGPSSG 78

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 74.7 bits (184), Expect = 4e-17
 Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 4/70 (5%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHT---GEKPFKCKVCDKAFADKSNLRAHIQT-HSKVKPF 260
           QC  C  +  +   L  H R H        F C+ C K F    ++ AH    H  +   
Sbjct: 9   QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA 68

Query: 261 VCEKCGKAFA 270
             E  G +  
Sbjct: 69  PQESSGPSSG 78

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 70.5 bits (173), Expect = 1e-15
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHSKV---KPFVCEKCGKAFALKSYLYKH 342
           SS     +C++C      K++L  H + H++      F CE CGK F     +  H
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAH 57

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 50.1 bits (120), Expect = 2e-08
 Identities = 14/93 (15%), Positives = 21/93 (22%), Gaps = 26/93 (27%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQC 206
            QC  CG      ++L  H++ H          C  CG                      
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCG---------------------- 45

Query: 207 PHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDK 239
               K F +P  +  H            +    
Sbjct: 46  ----KRFEKPDSVAAHRSKSHPALLLAPQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 49.7 bits (119), Expect = 3e-08
 Identities = 12/54 (22%), Positives = 19/54 (35%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH 420
            QC  CG      ++L  H++ H          C  CGK +    + + H    
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 72.1 bits (178), Expect = 2e-16
 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQ-THS 255
            C  C+++F+R   L+ H R+HT EKP+ C +C++AF  +  L  H Q  HS
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 67.5 bits (166), Expect = 1e-14
 Identities = 18/50 (36%), Positives = 31/50 (62%)

Query: 230 KPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 279
           + F C+VC +AFA + +L+ H ++H+  KP+ C  C +AF  +  L +H 
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 67.5 bits (166), Expect = 1e-14
 Identities = 18/50 (36%), Positives = 31/50 (62%)

Query: 294 KPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
           + F C+VC +AFA + +L+ H ++H+  KP+ C  C +AF  +  L +H 
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 62.9 bits (154), Expect = 4e-13
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 9/63 (14%)

Query: 258 KPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQ- 316
           + FVCE C +AFA + +L +H  S         ++EKP+ C +C++AF  +  L  H Q 
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH--------TNEKPYPCGLCNRAFTRRDLLIRHAQK 52

Query: 317 THS 319
            HS
Sbjct: 53  IHS 55

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 45.9 bits (110), Expect = 3e-07
 Identities = 15/86 (17%), Positives = 25/86 (29%), Gaps = 32/86 (37%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKAR--TCPQCGKLYVSMPAYSMHLRTHNQIC 204
           F C  C + ++   +L RH + H     T  +   C  C + +         L  H Q  
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSH-----TNEKPYPCGLCNRAF----TRRDLLIRHAQ-- 51

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEK 230
                              + H+G  
Sbjct: 52  -------------------KIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 43.2 bits (103), Expect = 3e-06
 Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 11/58 (18%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKAR--TCPQCGKLYVSMPAYSMHLRTHNQ 422
           F C  C + ++   +L RH + H     T  +   C  C + +         L  H Q
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSH-----TNEKPYPCGLCNRAF----TRRDLLIRHAQ 51

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 71.6 bits (176), Expect = 5e-16
 Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 196 HLRTHNQ--ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQT 253
           ++    +   C    C + FSR   L  HIR HTG+KPF+C++C + F+   +L  HI+T
Sbjct: 12  YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71

Query: 254 HS 255
           H+
Sbjct: 72  HT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 60.4 bits (147), Expect = 4e-12
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)

Query: 219 LQGHIRTHTGEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLY 276
           L  ++      +P+ C V  CD+ F+    L  HI+ H+  KPF C  C + F+   +L 
Sbjct: 9   LLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLT 66

Query: 277 KH 278
            H
Sbjct: 67  TH 68

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 54.6 bits (132), Expect = 5e-10
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 293 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
            +P+ C V  CD+ F+    L  HI+ H+  KPF C  C + F+   +L  H
Sbjct: 17  MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH 68

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 54.2 bits (131), Expect = 8e-10
 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 12/77 (15%)

Query: 245 SNLRAHIQTHSKVKPFVC--EKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCD 302
           +NL  ++    +  P+ C  E C + F+    L +H            + +KPF+C++C 
Sbjct: 7   NNLLNYVVPKMR--PYACPVESCDRRFSRSDELTRH--------IRIHTGQKPFQCRICM 56

Query: 303 KAFADKSNLRAHIQTHS 319
           + F+   +L  HI+TH+
Sbjct: 57  RNFSRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 9/75 (12%)

Query: 377 STSSNLARHRQIHRSPDDTKARTCP--QCGKLYVSMPAYSMHLRTHNQI--CQCPHCSKS 432
              +NL  +          +   CP   C + +      + H+R H      QC  C ++
Sbjct: 4   HPMNNLLNYVVPK-----MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRN 58

Query: 433 FSRPWLLQGHIRTHT 447
           FSR   L  HIRTHT
Sbjct: 59  FSRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 36.9 bits (86), Expect = 8e-04
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)

Query: 416 HLRTHNQ--ICQCPHCSKSFSRPWLLQGHIRTHTG 448
           ++    +   C    C + FSR   L  HIR HTG
Sbjct: 12  YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTG 46

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 36.9 bits (86), Expect = 9e-04
 Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 31/83 (37%)

Query: 147 FQCR--DCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQIC 204
           + C    C + +S S  L RH +IH     T         K +                 
Sbjct: 20  YACPVESCDRRFSRSDELTRHIRIH-----TGQ-------KPF----------------- 50

Query: 205 QCPHCSKSFSRPWLLQGHIRTHT 227
           QC  C ++FSR   L  HIRTHT
Sbjct: 51  QCRICMRNFSRSDHLTTHIRTHT 73

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 69.5 bits (171), Expect = 2e-15
 Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQ-THSKVKPFVCEKCGKAFA 270
              + +  KP+ C+ C K F+   +L  HI+  H+  +P  C+      +
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 61.4 bits (150), Expect = 1e-12
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 291 SSEKPFKCKVCDKAFADKSNLRAHIQ-THSKVKPFVCEKCGKAFA 334
           S  KP+ C+ C K F+   +L  HI+  H+  +P  C+      +
Sbjct: 8   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 61.1 bits (149), Expect = 2e-12
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 206 CPHCSKSFSRPWLLQGHI-RTHTGEKPFKCKVCDKAFAD 243
           C  C K FSRP  L GHI + HT E+P KC+V     + 
Sbjct: 15  CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 55.7 bits (135), Expect = 1e-10
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 7/59 (11%)

Query: 249 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFAD 307
           +   + S  KP++C+ CGK F+   +L  H            +SE+P KC+V     + 
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQ-------VHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + S  KP++C+ CGK F+   +L  H
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGH 31

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 67.5 bits (164), Expect = 5e-14
 Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 3/101 (2%)

Query: 219 LQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 278
            + +    TG   F+CK C  A+     L  H+   +        +       +    + 
Sbjct: 7   GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRWSKPRK 65

Query: 279 EDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHS 319
              S L+      ++K  KC  C  +F    +L  H+    
Sbjct: 66  --RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 59.0 bits (142), Expect = 5e-11
 Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 3/98 (3%)

Query: 245 SNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKA 304
           S+ + +    +    F C+ C  A+     L  H + +     D+    +         +
Sbjct: 5   SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDN---HETDNNNPKRWS 61

Query: 305 FADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              K +L          K   C  CG +F     L  H
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 58.2 bits (140), Expect = 8e-11
 Identities = 17/106 (16%), Positives = 31/106 (29%), Gaps = 10/106 (9%)

Query: 157 STSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH-------NQICQCPHC 209
           S+ S+   +  I           C  C   Y ++   ++H+          ++       
Sbjct: 2   SSGSSGKLYGSIFTG---ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPK 58

Query: 210 SKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHS 255
             S  R   L         +K  KC  C  +F    +L  H+    
Sbjct: 59  RWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 52.8 bits (126), Expect = 6e-09
 Identities = 17/113 (15%), Positives = 36/113 (31%), Gaps = 13/113 (11%)

Query: 309 SNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQ 368
           S+ + +    +    F C+ C  A+     L  H + +          GH   +   + +
Sbjct: 5   SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNET----------GH---YRDDNHE 51

Query: 369 CRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHN 421
             +      +        ++    D  K   C  CG  + S+   S+H+    
Sbjct: 52  TDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 42.8 bits (100), Expect = 2e-05
 Identities = 21/103 (20%), Positives = 33/103 (32%), Gaps = 5/103 (4%)

Query: 350 SYDSSSNGHLNKFT-TISFQCRDCGKHYSTSSNLARHRQI--HRSPDDTKARTCPQCGKL 406
           S  SS   + + FT    F+C+DC   Y T   L  H     H   D+ +          
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 407 YVSMPAYSMHLRTH--NQICQCPHCSKSFSRPWLLQGHIRTHT 447
                +           ++ +C +C  SF     L  H+    
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 63.7 bits (156), Expect = 2e-13
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 221 GHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPF 260
           G   +  GEKP+ C++C   F     L++H++ H+   P 
Sbjct: 1   GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPF 324
           EKP+ C++C   F     L++H++ H+   P 
Sbjct: 9   EKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 10/28 (35%), Positives = 12/28 (42%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPF 232
            C  C   F     L+ H+R HTG  P 
Sbjct: 13  PCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 9/30 (30%), Positives = 11/30 (36%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
               +    KP+ CE CG  F     L  H
Sbjct: 1   GSSGSSGGEKPYPCEICGTRFRHLQTLKSH 30

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 9/24 (37%), Positives = 11/24 (45%)

Query: 425 QCPHCSKSFSRPWLLQGHIRTHTG 448
            C  C   F     L+ H+R HTG
Sbjct: 13  PCEICGTRFRHLQTLKSHLRIHTG 36

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 221 GHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPF 260
           G   +  GEKP+KC+ C   F   ++LRAH+  H+   P 
Sbjct: 1   GSSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPF 324
           EKP+KC+ C   F   ++LRAH+  H+   P 
Sbjct: 9   EKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 9/28 (32%), Positives = 13/28 (46%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPF 232
           +C  C   F +   L+ H+  HTG  P 
Sbjct: 13  KCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              +    KP+ CE CG  F   ++L  H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAH 30

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 3e-13
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TGEKP+KC  C KAF  KS L  H Q+H+  +    
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 6e-08
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKP+KC  C KAF  KS L  H Q+H+  +    
Sbjct: 10  EKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 196 HLRTH--NQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C K+F+R   L  H ++HTGE+    
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + +  KP+ C  CGKAF  KS L+ H
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIH 31

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 4e-13
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TGEKPF+CK C   F+   +L  H+++H +  P   
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.0 bits (115), Expect = 5e-08
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKPF+CK C   F+   +L  H+++H +  P   
Sbjct: 10  EKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.6 bits (114), Expect = 7e-08
 Identities = 10/30 (33%), Positives = 13/30 (43%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           QC  C  +FS    L  H+R+H    P   
Sbjct: 14  QCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 9e-06
 Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 8/50 (16%)

Query: 249 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKC 298
           +   + +  KPF C++CG  F+    L+KH          S     P   
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHL--------RSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
           +   + +  KPF C++CG  F+    L+KH 
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHL 32

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 425 QCPHCSKSFSRPWLLQGHIRTHTG 448
           QC  C  +FS    L  H+R+H  
Sbjct: 14  QCKECGMNFSWSCSLFKHLRSHER 37

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 4e-13
 Identities = 16/43 (37%), Positives = 22/43 (51%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + TGEKP+KC  C K+F  KS LR H + H+  +      
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS 45

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           EKP+KC  C K+F  KS LR H + H+  +      
Sbjct: 10  EKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS 45

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C KSF+    L+ H + HTGE+    
Sbjct: 14  KCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP+ C  CGK+F  KS L  H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIH 31

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 62.2 bits (152), Expect = 5e-13
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCG 266
              + +GEKPFKC+ C K F   S   +H ++HS  KP      G
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.9 bits (115), Expect = 6e-08
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCG 330
           EKPFKC+ C K F   S   +H ++HS  KP      G
Sbjct: 10  EKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C K F        H R+H+GEKP   
Sbjct: 14  KCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 8e-05
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + S  KPF CE+CGK F   S  Y H
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSH 31

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 6e-13
 Identities = 20/42 (47%), Positives = 24/42 (57%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKPF+C  C KAF  KSNL  H +TH+  KP    
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 18/35 (51%), Positives = 21/35 (60%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKPF+C  C KAF  KSNL  H +TH+  KP    
Sbjct: 10  EKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C K+F+    L  H RTHTGEKP   
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 6e-05
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KPF C +C KAF  KS L  H
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVH 31

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 6e-13
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + + EKP+KC+ C K +  + NL  H + H   K      
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS 45

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 6e-08
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           EKP+KC+ C K +  + NL  H + H   K      
Sbjct: 10  EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS 45

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           C  C K ++R   L  H R H GEK    
Sbjct: 15  CEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 8/50 (16%)

Query: 249 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKC 298
           +   + S  KP+ CE CGK +  +  L  H+             EK    
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQ--------RVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 7e-05
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + S  KP+ CE CGK +  +  L  H
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMH 31

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 62.1 bits (152), Expect = 6e-13
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TGEKP++C  C KAF  KSNL  H +TH+       
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKP++C  C KAF  KSNL  H +TH+       
Sbjct: 10  EKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           C  C K+F+    L  H RTHTGE     
Sbjct: 15  CNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP+ C +C KAF  KS L  H
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVH 31

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 6e-13
 Identities = 19/42 (45%), Positives = 26/42 (61%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKP++CKVC KAF  K++L  H +TH+  KP    
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 9e-08
 Identities = 17/35 (48%), Positives = 23/35 (65%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKP++CKVC KAF  K++L  H +TH+  KP    
Sbjct: 10  EKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCK 235
              +    +  +C  CSK+F++   L  H +THTGEKP    
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP+ C+ C KAF  K++L +H
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQH 31

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 61.8 bits (151), Expect = 6e-13
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              +  GEK +KC+ CD  F+  S+LR H   H   KP     
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS 45

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           EK +KC+ CD  F+  S+LR H   H   KP     
Sbjct: 10  EKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS 45

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           C  C   FS+   L+ H   H GEKP   
Sbjct: 15  CRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 10/50 (20%), Positives = 17/50 (34%), Gaps = 8/50 (16%)

Query: 249 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKC 298
           +   +    K + C +C   F+  S L  H+        +    EKP   
Sbjct: 2   SSGSSGMGEKTWKCRECDMCFSQASSLRLHQ--------NVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 7/30 (23%), Positives = 12/30 (40%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   +    K + C +C   F+  S L  H
Sbjct: 2   SSGSSGMGEKTWKCRECDMCFSQASSLRLH 31

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 61.7 bits (151), Expect = 7e-13
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TG KP+ C  C KAF  KS L  H +TH+       
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
            KP+ C  C KAF  KS L  H +TH+       
Sbjct: 10  MKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 12/30 (40%), Positives = 13/30 (43%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
            C  C K+F     L  H RTHTGE     
Sbjct: 14  VCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.9 bits (97), Expect = 2e-05
 Identities = 14/31 (45%), Positives = 20/31 (64%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
           +   + + +KP+VC +CGKAF  KSYL  H 
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHT 32

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.7 bits (151), Expect = 8e-13
 Identities = 18/43 (41%), Positives = 24/43 (55%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + TGE+P+ C VC KAF D+SNL  H + H+  KP     
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS 45

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 9e-08
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           E+P+ C VC KAF D+SNL  H + H+  KP     
Sbjct: 10  ERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS 45

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
            C  C K+F+    L  H + HTGEKP   
Sbjct: 14  ICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  +P++C  CGKAF  +S L KH
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKH 31

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 8e-13
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKP++C  C KAF D+SNL  H + H+  KP    
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKP++C  C KAF D+SNL  H + H+  KP    
Sbjct: 10  EKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C K+F+    L  H + HTGEKP   
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP+ C +CGKAF  +S L+ H
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTH 31

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 8e-13
 Identities = 19/43 (44%), Positives = 23/43 (53%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + TGEKP+KC  C KAF  +S+L  H  THS  KP     
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS 45

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 9e-08
 Identities = 17/36 (47%), Positives = 20/36 (55%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           EKP+KC  C KAF  +S+L  H  THS  KP     
Sbjct: 10  EKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS 45

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C K+F     L  H  TH+GEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
              + +  KP+ C +CGKAF  +S L  H+
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQ 32

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.7 bits (151), Expect = 8e-13
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKPFKC +C K+F  +S L  H   H+  KP    
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKPFKC +C K+F  +S L  H   H+  KP    
Sbjct: 10  EKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 12/29 (41%), Positives = 12/29 (41%)

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           C  C KSF     L  H   HT EKP   
Sbjct: 15  CDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
           +   + +  KPF C+ CGK+F  +S L +H 
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHS 32

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 61.4 bits (150), Expect = 9e-13
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              +  G  P+KC  C+K+F+ K  L  H + H++ KP     
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS 45

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
             P+KC  C+K+F+ K  L  H + H++ KP     
Sbjct: 10  VNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS 45

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 14/29 (48%), Positives = 14/29 (48%)

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           C  C KSFS    L  H R HT EKP   
Sbjct: 15  CSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 8/50 (16%)

Query: 249 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKC 298
           +   + + V P+ C +C K+F+ K  L  H+           + EKP   
Sbjct: 2   SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQ--------RMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
           +   + + V P+ C +C K+F+ K  L  H+
Sbjct: 2   SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQ 32

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              +  GEKP+ C  C KAF+ KS L  H++THS  KP    
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +   C  C K+FS    L  H+RTH+GEKP   
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 17/35 (48%), Positives = 21/35 (60%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKP+ C  C KAF+ KS L  H++THS  KP    
Sbjct: 10  EKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 13/31 (41%), Positives = 19/31 (61%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
           +   + +  KP+ C +CGKAF+ KSYL  H 
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHM 32

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + TGEKP++C VC KAF+  ++L  H + HS  KP     
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           EKP++C VC KAF+  ++L  H + HS  KP     
Sbjct: 10  EKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C K+FS    L  H R H+GEKP   
Sbjct: 14  ECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + +  KP+ C+ C KAF+  + L +H
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQH 31

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + +GEKP+ C  C K F+ KS L AH +TH+  KP    
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKP+ C  C K F+ KS L AH +TH+  KP    
Sbjct: 10  EKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 9e-07
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              + +  +   C  C K+FS+  +L  H RTHTGEKP   
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + S  KP+ C +CGK F+ KS L  H
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAH 31

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 16/43 (37%), Positives = 22/43 (51%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + +GEKPFKC+ C K F   S L +H + H+  KP     
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS 45

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 15/36 (41%), Positives = 19/36 (52%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           EKPFKC+ C K F   S L +H + H+  KP     
Sbjct: 10  EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS 45

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C K F++   L  H R HTGEKP   
Sbjct: 14  KCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + S  KPF CE+CGK F   S L+ H
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSH 31

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 61.0 bits (149), Expect = 2e-12
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TG KP+ C  C K F+ KS L  H ++H+ VKP   
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
            KP+ C  C K F+ KS L  H ++H+ VKP   
Sbjct: 10  VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
            C  C+K+FS    L  H R+HTG KP   
Sbjct: 14  GCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 39.4 bits (93), Expect = 6e-05
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + + VKP+ C +C K F+LKS L  H
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVH 31

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 2e-12
 Identities = 18/43 (41%), Positives = 21/43 (48%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + TGEKP+KC  C KAF   SNL  H   H+  KP     
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS 45

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 16/36 (44%), Positives = 18/36 (50%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           EKP+KC  C KAF   SNL  H   H+  KP     
Sbjct: 10  EKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS 45

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C K+F     L  H   HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP+ C +CGKAF   S L  H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRAHSNLTTH 31

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TGE PF C  C K F  K+NL  H + H+  +P   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           E PF C  C K F  K+NL  H + H+  +P   
Sbjct: 10  ENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +        C  C K F+    L  H + HTGE+P   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +   PF+C +CGK F  K+ L  H
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIH 31

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKP+KC+ C K F  + +L  H   H+  KP    
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKP+KC+ C K F  + +L  H   H+  KP    
Sbjct: 10  EKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 12/29 (41%), Positives = 12/29 (41%)

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           C  C K F     L  H   HTGEKP   
Sbjct: 15  CEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP+ CE+CGK F  +  LY H
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTH 31

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.7 bits (148), Expect = 2e-12
 Identities = 18/41 (43%), Positives = 20/41 (48%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TGEKP KC  C KAF  KS L  H +TH   K    
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.2 bits (113), Expect = 9e-08
 Identities = 16/34 (47%), Positives = 17/34 (50%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKP KC  C KAF  KS L  H +TH   K    
Sbjct: 10  EKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    + C+C  C K+F     L  H RTH  +K    
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 8/50 (16%)

Query: 249 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKC 298
           +   + +  KP  C +CGKAF  KS L  H+         +   +K    
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQ--------RTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.5 bits (93), Expect = 5e-05
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP  C +CGKAF  KS L  H
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMH 31

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + TGEKP+KC+ C K +  K NL  H + H+  +P     
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS 45

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           EKP+KC+ C K +  K NL  H + H+  +P     
Sbjct: 10  EKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS 45

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           C  C K ++  + L  H + HTGE+P   
Sbjct: 15  CEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP+ CEKCGK +  K  L  H
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMH 31

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + TG K F+C  C KAF  KS L  H + H+  KP     
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
            K F+C  C KAF  KS L  H + H+  KP     
Sbjct: 10  GKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C K+F+R   L  H + HTGEKP   
Sbjct: 14  ECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  K F C +CGKAF  KS L  H
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMH 31

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 60.3 bits (147), Expect = 2e-12
 Identities = 16/40 (40%), Positives = 23/40 (57%)

Query: 221 GHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPF 260
           G   +  GEKP++C  C KAF+ K +L  HI+ H+   P 
Sbjct: 1   GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 14/32 (43%), Positives = 20/32 (62%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPF 324
           EKP++C  C KAF+ K +L  HI+ H+   P 
Sbjct: 9   EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPF 232
              +    +  +C  C K+FS+   L  HIR HTG  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
               +    KP+ C++CGKAF+ K  L  H
Sbjct: 1   GSSGSSGGEKPYRCDQCGKAFSQKGSLIVH 30

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 61.2 bits (149), Expect = 2e-12
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 6/70 (8%)

Query: 191 PAYSMHLRTHNQ----ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKV--CDKAFADK 244
              S      ++    IC  P C K++ +   L+ H RTHTGEKPF C    C++ FA  
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62

Query: 245 SNLRAHIQTH 254
             L  H +TH
Sbjct: 63  DELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 56.2 bits (136), Expect = 1e-10
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 219 LQGHIRTHTGEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVC--EKCGKAFALKSY 274
             G     +  +   C    C K +   S+L+AH +TH+  KPF C  + C + FA    
Sbjct: 5   SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64

Query: 275 LYKH 278
           L +H
Sbjct: 65  LSRH 68

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 47.8 bits (114), Expect = 1e-07
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)

Query: 289 SSSSEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVC--EKCGKAFALKSYLYKH 342
            SS  +   C    C K +   S+L+AH +TH+  KPF C  + C + FA    L +H
Sbjct: 11  DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRH 68

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 39.7 bits (93), Expect = 9e-05
 Identities = 19/64 (29%), Positives = 23/64 (35%), Gaps = 6/64 (9%)

Query: 389 HRSPDDTKARTC--PQCGKLYVSMPAYSMHLRTHNQ----ICQCPHCSKSFSRPWLLQGH 442
                  ++  C  P CGK Y        H RTH       C    C + F+R   L  H
Sbjct: 9   QIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRH 68

Query: 443 IRTH 446
            RTH
Sbjct: 69  RRTH 72

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKP++C VC KAF+ + +L  H + HS  KP    
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKP++C VC KAF+ + +L  H + HS  KP    
Sbjct: 10  EKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C K+FS    L  H R H+G+KP   
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 9e-04
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + +  KP+ C  CGKAF+ +  L  H
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVH 31

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + +GEKP++C  C KAF  KS L  H +TH+ V     
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKP++C  C KAF  KS L  H +TH+ V     
Sbjct: 10  EKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C K+F    LL  H RTH G      
Sbjct: 14  ECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 14/31 (45%), Positives = 18/31 (58%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
           +   + S  KP+ C +CGKAF  KS L  HE
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHE 32

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + TGEKP++C  C KAF+ +S+L  H   H+  KP     
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           EKP++C  C KAF+ +S+L  H   H+  KP     
Sbjct: 10  EKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCK 235
           +C  C K+FS    L  H   HTG+KP    
Sbjct: 14  ECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 11/30 (36%), Positives = 19/30 (63%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
              + +  KP+ C +CGKAF+++S L  H+
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQ 32

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 3e-12
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + +GEKP+KC  C K +  + +L  H + H+  K      
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS 45

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           EKP+KC  C K +  + +L  H + H+  K      
Sbjct: 10  EKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS 45

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C K + R   L  H R HTGEK    
Sbjct: 14  KCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + S  KP+ C +CGK +  +  L  H
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFH 31

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 60.2 bits (147), Expect = 3e-12
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TGEKPFKC  C K F+ +S L  H + H+  KP   
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKPFKC  C K F+ +S L  H + H+  KP   
Sbjct: 10  EKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 44.4 bits (106), Expect = 9e-07
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C K FSR   L  H + HTGEKP   
Sbjct: 14  KCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KPF C +CGK F+ +S L  H
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVH 31

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.9 bits (146), Expect = 3e-12
 Identities = 16/43 (37%), Positives = 22/43 (51%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + TGEKP+KC  C KAF D S+   H + H+  +P     
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           EKP+KC  C KAF D S+   H + H+  +P     
Sbjct: 10  EKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 8e-06
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C K+F        H R HTG++P   
Sbjct: 14  KCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
           +   + +  KP+ C +CGKAF   S   +H+
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQ 32

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 59.9 bits (146), Expect = 3e-12
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TG+KPF+C  C K+F  K NL  H + H+  K    
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           +KPF+C  C K+F  K NL  H + H+  K    
Sbjct: 10  QKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C HC KSF     L  H R HTGEK    
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KPF C  CGK+F  K  L  H
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTH 31

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 3e-12
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + TG KP+ C  C KAF+  S+L  H   H+  KP     
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS 45

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
            KP+ C  C KAF+  S+L  H   H+  KP     
Sbjct: 10  VKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS 45

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 8e-06
 Identities = 13/30 (43%), Positives = 14/30 (46%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
            C  C K+FS    L  H   HTGEKP   
Sbjct: 14  MCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + + VKP++C +CGKAF++ S L  H
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTH 31

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 3e-12
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + TGE+ ++C  C KAF  KS L  H + H   KP     
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           E+ ++C  C KAF  KS L  H + H   KP     
Sbjct: 10  ERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C K+F +   L  H R H GEKP   
Sbjct: 14  ECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + +  + + C +CGKAF  KS L  H
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMH 31

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 4e-12
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKP+ C  C K+F  KS+L  H + H+  KP    
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 5e-07
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKP+ C  C K+F  KS+L  H + H+  KP    
Sbjct: 10  EKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 14/30 (46%), Positives = 15/30 (50%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
            C  C KSF +   L  H R HTGEKP   
Sbjct: 14  ICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/30 (36%), Positives = 20/30 (66%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP++C +CGK+F  KS+L +H
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRH 31

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 4e-12
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKPF C  C KAF+D   L  H + H+  KP    
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 5e-07
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKPF C  C KAF+D   L  H + H+  KP    
Sbjct: 10  EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 14/30 (46%), Positives = 15/30 (50%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
            C  C K+FS    L  H R HTGEKP   
Sbjct: 14  DCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
           +   + +  KPF C  CGKAF+    L +H 
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHR 32

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 59.4 bits (145), Expect = 4e-12
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKPF+C  C K+F+  S L  H + H+  KP    
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKPF+C  C K+F+  S L  H + H+  KP    
Sbjct: 10  EKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 15/30 (50%), Positives = 16/30 (53%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C KSFS    L  H R HTGEKP   
Sbjct: 14  ECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + +  KPF C +CGK+F++ S L  H
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATH 31

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 4e-12
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + +G+KP++CK C K F    +L  H + H+  +      
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS 45

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           +KP++CK C K F    +L  H + H+  +      
Sbjct: 10  KKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS 45

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCK 235
           +C  C K+F +   L  H R HTGE+     
Sbjct: 14  ECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 10/51 (19%), Positives = 20/51 (39%), Gaps = 8/51 (15%)

Query: 249 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCK 299
           +   + S  KP+ C++C K F    +L +H+           + E+     
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHK--------RVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + S  KP+ C++C K F    +L +H
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQH 31

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 5e-12
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKP+ C  C KAF  +SNL  H + H+K KP    
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKP+ C  C KAF  +SNL  H + H+K KP    
Sbjct: 10  EKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +   C  C K+F+    L  H + HT +KP   
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 9e-05
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP++C +CGKAF ++S L KH
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKH 31

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 59.6 bits (145), Expect = 5e-12
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 222 HIRTHTGEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKPF C    C   F+    L  H ++HS VKP    
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 51.1 bits (123), Expect = 5e-09
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 4/43 (9%)

Query: 196 HLRTHNQ----ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +        C  P C   FSR   L  H R+H+G KP   
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 293 EKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKPF C    C   F+    L  H ++HS VKP    
Sbjct: 10  EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 4/37 (10%)

Query: 416 HLRTHNQ----ICQCPHCSKSFSRPWLLQGHIRTHTG 448
              +        C  P C   FSR   L  H R+H+G
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG 39

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 36.5 bits (85), Expect = 6e-04
 Identities = 13/52 (25%), Positives = 18/52 (34%), Gaps = 10/52 (19%)

Query: 249 AHIQTHSKVKPFVC--EKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKC 298
           +   + +  KPF C    CG  F+    L +H          S S  KP   
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRH--------RRSHSGVKPSGP 45

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 5e-12
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKP+ C+ C KAF   S L+ H + H+  KP    
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKP+ C+ C KAF   S L+ H + H+  KP    
Sbjct: 10  EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 14/29 (48%), Positives = 15/29 (51%)

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           C  C K+F     LQ H R HTGEKP   
Sbjct: 15  CEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP+ CE+CGKAF   S L +H
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEH 31

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 5e-12
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + +GEKP+KC  C KAF   ++L  H + H+  +P     
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS 45

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           EKP+KC  C KAF   ++L  H + H+  +P     
Sbjct: 10  EKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS 45

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C K+F R   L  H R HTG +P   
Sbjct: 14  KCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + S  KP+ C +CGKAF   ++L +H
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEH 31

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 5e-12
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TGEKP++C +C K+F  KS L  H Q H+  KP   
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKP++C +C K+F  KS L  H Q H+  KP   
Sbjct: 10  EKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCK 235
              +    +  +C  C KSF++   L  H + HTGEKP    
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + +  KP+ C  CGK+F  KS L+ H
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVH 31

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 59.5 bits (145), Expect = 5e-12
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + TGEK +KC  C K F+  S L  H + H+  KP     
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 45.2 bits (108), Expect = 5e-07
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           EK +KC  C K F+  S L  H + H+  KP     
Sbjct: 10  EKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 196 HLRTH--NQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C K FSR   L  H + HTGEKP   
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + +  K + C +CGK F+  S L +H
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQH 31

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.0 bits (144), Expect = 6e-12
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + TGEKP+KC  C K F   S+L  H   H+  KP     
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS 45

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 5e-07
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           EKP+KC  C K F   S+L  H   H+  KP     
Sbjct: 10  EKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS 45

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 13/30 (43%), Positives = 14/30 (46%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C K F R   L  H   HTGEKP   
Sbjct: 14  KCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 6e-12
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TGEKP+KC VC K+F   S+L  H + H+  KP   
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKP+KC VC K+F   S+L  H + H+  KP   
Sbjct: 10  EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 14/29 (48%), Positives = 14/29 (48%)

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           C  C KSF     L  H R HTGEKP   
Sbjct: 15  CDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 7e-04
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP+ C+ C K+F   S L  H
Sbjct: 2   SSGSSGTGEKPYKCDVCHKSFRYGSSLTVH 31

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 7e-12
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TGE P++C  C KAF+ K  L +H +TH+  KP   
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 15/30 (50%), Positives = 18/30 (60%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C K+FSR + L  H RTH GEKP   
Sbjct: 14  ECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           E P++C  C KAF+ K  L +H +TH+  KP   
Sbjct: 10  ENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + +   P+ C +CGKAF+ K  L  H
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISH 31

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 7e-12
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 221 GHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
               +  G+K FKC  C K F   S+L  H + H+  KP   
Sbjct: 2   SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 9e-07
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           +K FKC  C K F   S+L  H + H+  KP   
Sbjct: 10  KKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    ++ +C  C K+F++   L  H R HTGEKP   
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  K F C +C K F   S L  H
Sbjct: 2   SSGSSGAGKKLFKCNECKKTFTQSSSLTVH 31

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.0 bits (144), Expect = 7e-12
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + +GEKPFKCK C KAF    +L +H++ H+  KP    
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKPFKCK C KAF    +L +H++ H+  KP    
Sbjct: 10  EKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 9e-07
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              + +  +  +C  C K+F +   L  H+R HTGEKP   
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + S  KPF C++CGKAF    +L  H
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASH 31

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 8e-12
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + TGEKPFKC  C K++  + +L  H + H+  KP     
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 7e-07
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           EKPFKC  C K++  + +L  H + H+  KP     
Sbjct: 10  EKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C KS+++   L  H R HTGEKP   
Sbjct: 14  KCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 8e-12
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              +  GEK +KC VC K F+  S+L+ H + H+  KP   
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C K FS+   LQ H R HTGEKP   
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 7e-07
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EK +KC VC K F+  S+L+ H + H+  KP   
Sbjct: 10  EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 9e-12
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + TGEKP +C+ C K+F+  S L  H + H+   P     
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS 45

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           EKP +C+ C K+F+  S L  H + H+   P     
Sbjct: 10  EKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS 45

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C KSFS    L  H R HTGE P   
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + +  KP  C +CGK+F+  S L  H
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVH 31

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 9e-12
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + +GE+PFKC  C K F  +S+L  H++ HS+ K    
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           E+PFKC  C K F  +S+L  H++ HS+ K    
Sbjct: 10  ERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           C  C K F R   L GH+R H+ EK    
Sbjct: 15  CNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 6e-05
 Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 8/49 (16%)

Query: 250 HIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKC 298
              + S  +PF C +CGK F  +S+L  H            S EK    
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHL--------RLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + S  +PF C +CGK F  +S+L  H
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGH 31

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 58.7 bits (143), Expect = 9e-12
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TG++P++C  C KAF  KS+L  H ++H+  KP   
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.2 bits (108), Expect = 5e-07
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCK 235
              +    +  +C  C K+F     L  H R+HTGEKP    
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           ++P++C  C KAF  KS+L  H ++H+  KP   
Sbjct: 10  QRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + +  +P+ C +CGKAF  KS L  H
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICH 31

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 1e-11
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TGEKP++C  C K+F  KS L  H + H+   P   
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKP++C  C K+F  KS L  H + H+   P   
Sbjct: 10  EKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C KSF +   L  H R HTGE P   
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 5e-04
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP+ C  CGK+F  KS L+ H
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVH 31

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 1e-11
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKP+KC  C K F   S+L  H + H+ VKP    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 8e-07
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKP+KC  C K F   S+L  H + H+ VKP    
Sbjct: 10  EKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C K F++   L  H R HTG KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + TGEKP+KC  C K F   S L  H + H+  KP     
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS 45

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 9e-07
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           EKP+KC  C K F   S L  H + H+  KP     
Sbjct: 10  EKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS 45

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 13/30 (43%), Positives = 14/30 (46%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C K F     L  H R HTGEKP   
Sbjct: 14  KCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + +  KP+ C +CGK F   SYL +H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRH 31

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 59.0 bits (142), Expect = 1e-11
 Identities = 19/53 (35%), Positives = 30/53 (56%)

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVK 258
           C  C     +P +L+ HIRTHT  +P+ C  C+ +F  K NL  H+++ +  K
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.8 bits (113), Expect = 9e-08
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 8/63 (12%)

Query: 260 FVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHS 319
           ++CE+CG      S L KH  +         +  +P+ C  C+ +F  K NL  H+++ +
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTH--------TDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53

Query: 320 KVK 322
             K
Sbjct: 54  HSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.4 bits (112), Expect = 1e-07
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 232 FKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 278
           + C+ C       S L+ HI+TH+ V+P+ C  C  +F  K  L KH
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKH 48

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.4 bits (112), Expect = 1e-07
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 296 FKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           + C+ C       S L+ HI+TH+ V+P+ C  C  +F  K  L KH
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKH 48

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 43.6 bits (102), Expect = 3e-06
 Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 179 TCPQCGKLYVSMPAYSMHLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEK 230
            C +CG           H+RTH   +   C +C+ SF     L  H+++    K
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.5 bits (89), Expect = 1e-04
 Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 2/52 (3%)

Query: 399 TCPQCGKLYVSMPAYSMHLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTG 448
            C +CG           H+RTH   +   C +C+ SF     L  H+++   
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TGEKP++C  C KAFA K+NL  H + H+  KP   
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 16/34 (47%), Positives = 21/34 (61%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKP++C  C KAFA K+NL  H + H+  KP   
Sbjct: 10  EKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C K+F++   L  H R HTGEKP   
Sbjct: 14  RCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP+ C +CGKAFA K+ L +H
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQH 31

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKP+KC  C KAF+  S L  H + H+  KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKP+KC  C KAF+  S L  H + H+  KP    
Sbjct: 10  EKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C K+FS+   L  H R HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + +  KP+ C +CGKAF+  S L +H
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARH 31

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKP+ C VC KAF   ++L  H++ H++       
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKP+ C VC KAF   ++L  H++ H++       
Sbjct: 10  EKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 10/31 (32%), Positives = 12/31 (38%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCK 235
            C  C K+F     L  H+R HT E      
Sbjct: 14  SCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + +  KP+ C  CGKAF L ++L +H
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQH 31

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 58.4 bits (142), Expect = 1e-11
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKP+ CK C K+F   S L  H + HS  KP    
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 13/31 (41%), Positives = 14/31 (45%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCK 235
            C  C KSF     L  H R H+GEKP    
Sbjct: 14  NCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKP+ CK C K+F   S L  H + HS  KP    
Sbjct: 10  EKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP+ C++CGK+F   S L KH
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKH 31

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKP+KC  C K F   S+L  H   H+  KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKP+KC  C K F   S+L  H   H+  KP    
Sbjct: 10  EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.2 bits (103), Expect = 2e-06
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C K F++   L  H   HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP+ C +CGK F   S+L +H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRH 31

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + +GEKPF+C+ C K F   S+L +H + H+  KP   
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              + +  +  QC  C K F++   L  H R HTGEKP   
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKPF+C+ C K F   S+L +H + H+  KP   
Sbjct: 10  EKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + S  KPF CE+CGK F   S+L+ H
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSH 31

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TGE+ ++C  C KAFA KS L  H + H+  KP   
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           E+ ++C  C KAFA KS L  H + H+  KP   
Sbjct: 10  ERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C K+F+R   L  H R HTGEKP   
Sbjct: 14  ECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + +  + + C +CGKAFA KS L  H
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMH 31

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TGEK + CK C K+F+    L  H + HS  KP   
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 15/30 (50%), Positives = 16/30 (53%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
            C  C KSFSR   L  H R H+GEKP   
Sbjct: 14  NCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EK + CK C K+F+    L  H + HS  KP   
Sbjct: 10  EKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
           +   + +  K + C++CGK+F+    L KHE
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHE 32

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
              + TGE+P KC  C K+F   ++L  H + H+  KP     
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C KSF +   L  H R HTGEKP   
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 328
           E+P KC  C K+F   ++L  H + H+  KP     
Sbjct: 10  ERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TGEKP+KC+VC KAF   S+L  H   HS  +P   
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKP+KC+VC KAF   S+L  H   HS  +P   
Sbjct: 10  EKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 8e-06
 Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C K+F     L  H   H+GE+P   
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + +  KP+ C+ CGKAF + S+L +H
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQH 31

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TG KP++C  C KAF+  S L  H + H+  KP    
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
            KP++C  C KAF+  S L  H + H+  KP    
Sbjct: 10  GKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 15/30 (50%), Positives = 17/30 (56%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           QC  C K+FS+   L  H R HTGEKP   
Sbjct: 14  QCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP+ C +CGKAF+  S L +H
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARH 31

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + +GE+P+ C  C K F   S+L  H++ H + K    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 5e-07
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           C  C K+F R   L  H++ H  EK    
Sbjct: 15  CNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 7e-07
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           E+P+ C  C K F   S+L  H++ H + K    
Sbjct: 10  ERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 8/49 (16%)

Query: 250 HIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKC 298
              + S  +P+ C +CGK F   S+L +H              EK    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHL--------KRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
              + S  +P+ C +CGK F   S+L +H 
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHL 32

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKP+KC  C K F   S+L  H   H+  KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKP+KC  C K F   S+L  H   H+  KP    
Sbjct: 10  EKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C K F++   L  H   HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP+ C +CGK F   S+L +H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARH 31

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 57.2 bits (139), Expect = 3e-11
 Identities = 19/39 (48%), Positives = 24/39 (61%)

Query: 224 RTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              +GEKPF C  C+KAF+ KS L  H QTH++ KP   
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 18/34 (52%), Positives = 22/34 (64%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKPF C  C+KAF+ KS L  H QTH++ KP   
Sbjct: 8   EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.8 bits (107), Expect = 7e-07
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
            C  C K+FS    L  H +TH  EKP   
Sbjct: 12  GCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 39.1 bits (92), Expect = 7e-05
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 8/46 (17%)

Query: 253 THSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKC 298
             S  KPF C  C KAF+ KSYL  H+         + + EKP   
Sbjct: 4   GSSGEKPFGCSCCEKAFSSKSYLLVHQ--------QTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 14/26 (53%), Positives = 15/26 (57%)

Query: 317 THSKVKPFVCEKCGKAFALKSYLYKH 342
             S  KPF C  C KAF+ KSYL  H
Sbjct: 4   GSSGEKPFGCSCCEKAFSSKSYLLVH 29

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 3e-11
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TGEKP+KC  C K F   S+L  H + H+  KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           EKP+KC  C K F   S+L  H + H+  KP    
Sbjct: 10  EKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C K F++   L  H R HTG KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 3e-11
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + TG+KP+KC  C K F   S+L  H   H+  KP    
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           +KP+KC  C K F   S+L  H   H+  KP    
Sbjct: 10  KKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C K F++   L  H   HTGEKP   
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 8e-04
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP+ C +CGK F   S+L +H
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARH 31

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 4e-11
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + +GEKP+ C  C KAF   + L  H + H+  KP   
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              + +  +   C +C K+F     L  H R HTGEKP   
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKP+ C  C KAF   + L  H + H+  KP   
Sbjct: 10  EKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + S  KP+VC+ CGKAF L + L +H
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRH 31

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.7 bits (138), Expect = 4e-11
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + +GEKP+KC  C K F   S+L  H + H+  KP   
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              + +  +  +C  C K F++   L  H R HTGEKP   
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKP+KC  C K F   S+L  H + H+  KP   
Sbjct: 10  EKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + S  KP+ C +CGK F   S+L  H
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNH 31

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.8 bits (138), Expect = 4e-11
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              +  GE+  +C  C K F   SN   H + H+  KP   
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           E+  +C  C K F   SN   H + H+  KP   
Sbjct: 10  ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              + +  +  +C  C K F +      H R HTGEKP   
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 7/29 (24%), Positives = 10/29 (34%)

Query: 250 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 278
              +    +   C  CGK F   S   +H
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQH 31

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 7/29 (24%), Positives = 10/29 (34%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              +    +   C  CGK F   S   +H
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQH 31

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIH 169
            +C DCGK +  +SN  +HR+IH
Sbjct: 13  HRCSDCGKFFLQASNFIQHRRIH 35

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIH 389
            +C DCGK +  +SN  +HR+IH
Sbjct: 13  HRCSDCGKFFLQASNFIQHRRIH 35

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 56.7 bits (138), Expect = 4e-11
 Identities = 16/41 (39%), Positives = 24/41 (58%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TGEKP++CK C KAF+  ++L  H + H+  KP   
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 196 HLRTHN--QICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
              +    +  +C  C K+FS+   L  H R HTGEKP   
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKP++CK C KAF+  ++L  H + H+  KP   
Sbjct: 10  EKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 9e-11
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              +  GEKP++C  C K+F+    L  H  TH++ KP   
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKP++C  C K+F+    L  H  TH++ KP   
Sbjct: 10  EKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 15/30 (50%), Positives = 16/30 (53%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           QC  C KSFS  + L  H  THT EKP   
Sbjct: 14  QCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 8/50 (16%)

Query: 249 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKC 298
           +   +    KP+ C +CGK+F+    L +H          + + EKP   
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHW--------ITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   +    KP+ C +CGK+F+    L +H
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQH 31

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + TGE P++C  C K F+ K  L +H +THS       
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           E P++C  C K F+ K  L +H +THS       
Sbjct: 10  ENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           C  C K FSR   L  H +TH+G+     
Sbjct: 15  CCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 249 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 278
           +   + +   P+ C +CGK F+ K  L  H
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSH 31

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +   P+ C +CGK F+ K  L  H
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSH 31

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 224 RTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              +GE P++C  C KAF  K  L +H +TH+       
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           +C  C K+F+R   L  H RTH GE     
Sbjct: 12  ECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           E P++C  C KAF  K  L +H +TH+       
Sbjct: 8   ENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/47 (25%), Positives = 17/47 (36%), Gaps = 8/47 (17%)

Query: 252 QTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKC 298
              S   P+ C +CGKAF  K  L  H+         + + E     
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQ--------RTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 316 QTHSKVKPFVCEKCGKAFALKSYLYKHE 343
              S   P+ C +CGKAF  K  L  H+
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQ 30

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 55.0 bits (133), Expect = 1e-10
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 221 GHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPF 260
           G   +  GE P+ C  C K+F  + +L  H ++ S+  P 
Sbjct: 1   GSSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 45.7 bits (109), Expect = 3e-07
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 286 SYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPF 324
           S  SS  E P+ C  C K+F  + +L  H ++ S+  P 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFK 233
            C  C KSF++   L  H R+ +   P  
Sbjct: 13  LCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.9 bits (133), Expect = 2e-10
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + +  K  +C  C + F  KS+L  H + H+  KP   
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           SS K  +C  C + F  KS+L  H + H+  KP   
Sbjct: 8   SSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 250 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 278
              + S  K   C +CG+ F LKS+L +H
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQH 31

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + S  K   C +CG+ F LKS+L +H
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQH 31

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 13/30 (43%), Positives = 15/30 (50%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           QC  C + F+    L  H R HTGEKP   
Sbjct: 14  QCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 55.1 bits (132), Expect = 3e-10
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 7/61 (11%)

Query: 219 LQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH 278
                + H G++  KC  C   F           T S+ K  +CEKC K    ++ L K 
Sbjct: 6   SGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNKD 58

Query: 279 E 279
           E
Sbjct: 59  E 59

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 45.8 bits (108), Expect = 7e-07
 Identities = 16/80 (20%), Positives = 23/80 (28%), Gaps = 15/80 (18%)

Query: 245 SNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKA 304
            +     + H   +   C KCG  F  +S L               S  K   C+ C K 
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTL---------------SRRKTPMCEKCRKD 48

Query: 305 FADKSNLRAHIQTHSKVKPF 324
              ++ L       S  K  
Sbjct: 49  SCQEAALNKDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 42.0 bits (98), Expect = 1e-05
 Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 158 TSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPW 217
           +S +  + ++IH      +++ C +CG +++     S           C  C K   +  
Sbjct: 2   SSGSSGKRQKIHLG---DRSQKCSKCGIIFIRRSTLSRRKTP-----MCEKCRKDSCQEA 53

Query: 218 LLQGHIRTHTGEKPF 232
            L       +G+K  
Sbjct: 54  ALNKDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 40.4 bits (94), Expect = 5e-05
 Identities = 12/81 (14%), Positives = 21/81 (25%), Gaps = 22/81 (27%)

Query: 309 SNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQ 368
            +     + H   +   C KCG  F  +S L + +                      +  
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK----------------------TPM 41

Query: 369 CRDCGKHYSTSSNLARHRQIH 389
           C  C K     + L +     
Sbjct: 42  CEKCRKDSCQEAALNKDEGNE 62

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 37.7 bits (87), Expect = 5e-04
 Identities = 11/56 (19%), Positives = 16/56 (28%), Gaps = 7/56 (12%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPF 260
           +C  C   F           T +  K   C+ C K    ++ L       S  K  
Sbjct: 20  KCSKCGIIFI-------RRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 37.3 bits (86), Expect = 7e-04
 Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 8/71 (11%)

Query: 378 TSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPW 437
           +S +  + ++IH      +++ C +CG +++     S           C  C K   +  
Sbjct: 2   SSGSSGKRQKIHLG---DRSQKCSKCGIIFIRRSTLSRRKTP-----MCEKCRKDSCQEA 53

Query: 438 LLQGHIRTHTG 448
            L       +G
Sbjct: 54  ALNKDEGNESG 64

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 55.7 bits (134), Expect = 4e-10
 Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 9/73 (12%)

Query: 199 THNQICQCPHCSKSFSRPWLLQGHI-RTHTGEKPFKCKVC--------DKAFADKSNLRA 249
                     C ++FS    L  H+   H G       VC         K+F  K  L  
Sbjct: 21  EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80

Query: 250 HIQTHSKVKPFVC 262
           HI+ H+  K    
Sbjct: 81  HIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 54.6 bits (131), Expect = 9e-10
 Identities = 21/89 (23%), Positives = 26/89 (29%), Gaps = 22/89 (24%)

Query: 147 FQCRDCGKHYSTSSNLARH-RQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQ 205
              + C + +ST   L  H    H    +     C                         
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEE--------------------- 64

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
           CP   KSF   + L  HIR HTGEK    
Sbjct: 65  CPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 53.0 bits (127), Expect = 3e-09
 Identities = 17/103 (16%), Positives = 25/103 (24%), Gaps = 29/103 (28%)

Query: 225 THTGEKPFKCKVCDKAFADKSNLRAHIQ-THSKVKPFVCEKCGKAFALKSYLYKHEDSSC 283
               +     K CD+ F+    L  H+   H          C                  
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC------------------ 60

Query: 284 LKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
                        +C    K+F  K  L  HI+ H+  K    
Sbjct: 61  ----------YWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 40.3 bits (94), Expect = 1e-04
 Identities = 19/83 (22%), Positives = 24/83 (28%), Gaps = 22/83 (26%)

Query: 367 FQCRDCGKHYSTSSNLARH-RQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQ 425
              + C + +ST   L  H    H    +     C                         
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEE--------------------- 64

Query: 426 CPHCSKSFSRPWLLQGHIRTHTG 448
           CP   KSF   + L  HIR HTG
Sbjct: 65  CPREGKSFKAKYKLVNHIRVHTG 87

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 53.5 bits (129), Expect = 4e-10
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 221 GHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKV 257
           G  R  TG KPF+C  CD++F+   +L  H + H  V
Sbjct: 1   GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKV 321
            KPF+C  CD++F+   +L  H + H  V
Sbjct: 9   IKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 53.7 bits (130), Expect = 6e-10
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHI-QTHSKVKPFVC 262
              + TG+KP++C  C KAF   ++L  H    H+  KP   
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 39.1 bits (92), Expect = 7e-05
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHI-QTHSKVKPFVC 326
           +KP++C  C KAF   ++L  H    H+  KP   
Sbjct: 10  KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 205 QCPHCSKSFSRPWLLQGHIR-THTGEKPFKC 234
           +C  C K+F +   L  H R  HTGEKP   
Sbjct: 14  ECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
           +   + +  KP+ C +CGKAF   + L +H
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRH 31

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 53.0 bits (128), Expect = 1e-09
 Identities = 10/41 (24%), Positives = 16/41 (39%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              + T  K + C  C KAF    +L  H + H++      
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 9/34 (26%), Positives = 14/34 (41%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
            K + C  C KAF    +L  H + H++      
Sbjct: 10  SKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.0 bits (84), Expect = 9e-04
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + +  K + C +CGKAF    +L +H
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRH 31

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.6 bits (127), Expect = 1e-09
 Identities = 13/42 (30%), Positives = 16/42 (38%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 263
              + +GEK   C  C K F   S LR H + H   K     
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.3 bits (95), Expect = 2e-05
 Identities = 13/37 (35%), Positives = 14/37 (37%)

Query: 291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           S EK   C  C K F   S LR H + H   K     
Sbjct: 8   SGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.5 bits (93), Expect = 5e-05
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 250 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 278
              + S  K   C++CGK F   S L  H
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIH 31

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.5 bits (93), Expect = 5e-05
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKH 342
              + S  K   C++CGK F   S L  H
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIH 31

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.2 bits (87), Expect = 4e-04
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKC 234
            C  C K+F     L+ H R H GEK    
Sbjct: 14  TCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 10/37 (27%), Positives = 20/37 (54%)

Query: 224 RTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPF 260
              +G++ ++C+ C K+F  K +L  H + H+   P 
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 289 SSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPF 324
            SS ++ ++C+ C K+F  K +L  H + H+   P 
Sbjct: 4   GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPF 232
           +C  C KSF +   L  H R HTG  P 
Sbjct: 12  ECQECGKSFRQKGSLTLHERIHTGSGPS 39

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 50.3 bits (119), Expect = 4e-08
 Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 1/91 (1%)

Query: 163 ARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGH 222
           +         ++ +   C  C     S+     H R       CP+CS  F  P L Q H
Sbjct: 2   SSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEH 61

Query: 223 IRTHTGEKPFKCKVCDKAFADKSNLRAHIQT 253
             +    K   C  C + F    ++  H   
Sbjct: 62  -ESKCEYKKLTCLECMRTFKSSFSIWRHQVE 91

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 45.3 bits (106), Expect = 2e-06
 Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 3/75 (4%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK 264
           QC  C+   S       H R         C  C   F      + H ++  + K   C +
Sbjct: 18  QCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEH-ESKCEYKKLTCLE 74

Query: 265 CGKAFALKSYLYKHE 279
           C + F     +++H+
Sbjct: 75  CMRTFKSSFSIWRHQ 89

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 45.3 bits (106), Expect = 2e-06
 Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 11/90 (12%)

Query: 228 GEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSY 287
            ++ ++C++C+   +      +H +        VC  C   F       +HE        
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHE-------- 62

Query: 288 DSSSSEKPFKCKVCDKAFADKSNLRAHIQT 317
            S    K   C  C + F    ++  H   
Sbjct: 63  -SKCEYKKLTCLECMRTFKSSFSIWRHQVE 91

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 42.6 bits (99), Expect = 2e-05
 Identities = 15/95 (15%), Positives = 34/95 (35%), Gaps = 18/95 (18%)

Query: 292 SEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSY 351
           +++ ++C++C+   +      +H +        VC  C   F       +HE     K  
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHESKCEYKK- 69

Query: 352 DSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHR 386
                            C +C + + +S ++ RH+
Sbjct: 70  ---------------LTCLECMRTFKSSFSIWRHQ 89

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.5 bits (91), Expect = 3e-04
 Identities = 13/86 (15%), Positives = 26/86 (30%), Gaps = 11/86 (12%)

Query: 258 KPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQT 317
           + + C  C    +       HE                  C  C   F      + H ++
Sbjct: 15  EVYQCRLCNAKLSSLLEQGSHE----------RLCRNAAVCPYCSLRFFSPELKQEH-ES 63

Query: 318 HSKVKPFVCEKCGKAFALKSYLYKHE 343
             + K   C +C + F     +++H+
Sbjct: 64  KCEYKKLTCLECMRTFKSSFSIWRHQ 89

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 47.7 bits (114), Expect = 6e-08
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 224 RTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 262
              +GEKP+ C  C + F+D + L  H + H+       
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.9 bits (86), Expect = 5e-04
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC 326
           EKP+ C  C + F+D + L  H + H+       
Sbjct: 8   EKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.5 bits (85), Expect = 6e-04
 Identities = 8/27 (29%), Positives = 15/27 (55%)

Query: 253 THSKVKPFVCEKCGKAFALKSYLYKHE 279
             S  KP+ C +C + F+  + L +H+
Sbjct: 4   GSSGEKPYSCAECKETFSDNNRLVQHQ 30

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.5 bits (85), Expect = 6e-04
 Identities = 8/27 (29%), Positives = 15/27 (55%)

Query: 317 THSKVKPFVCEKCGKAFALKSYLYKHE 343
             S  KP+ C +C + F+  + L +H+
Sbjct: 4   GSSGEKPYSCAECKETFSDNNRLVQHQ 30

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 49.9 bits (118), Expect = 8e-08
 Identities = 19/120 (15%), Positives = 36/120 (30%), Gaps = 14/120 (11%)

Query: 203 ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKC----KVCDKAFADKSNLRAHIQTHSKVK 258
           +          +   L + H  T   ++  +      + +    D+S+    +     + 
Sbjct: 14  LSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAIS 73

Query: 259 PFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTH 318
            FVC  C   F+    L +H             +E    C VC K F    +   H+   
Sbjct: 74  QFVCPLCLMPFSSSVSLKQHI----------RYTEHTKVCPVCKKEFTSTDSALDHVCKK 123

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 49.2 bits (116), Expect = 2e-07
 Identities = 23/112 (20%), Positives = 32/112 (28%), Gaps = 4/112 (3%)

Query: 143 NNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQ 202
           N++        +       L   ++             PQ   L  S   Y +       
Sbjct: 16  NHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQ--LLDESSYLYRLLASKAIS 73

Query: 203 ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTH 254
              CP C   FS    L+ HIR    E    C VC K F    +   H+   
Sbjct: 74  QFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKK 123

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 45.3 bits (106), Expect = 4e-06
 Identities = 15/81 (18%), Positives = 23/81 (28%), Gaps = 2/81 (2%)

Query: 198 RTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKV 257
           R    I +    +            +        F C +C   F+   +L+ HI+     
Sbjct: 41  RLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE-- 98

Query: 258 KPFVCEKCGKAFALKSYLYKH 278
              VC  C K F        H
Sbjct: 99  HTKVCPVCKKEFTSTDSALDH 119

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 44.5 bits (104), Expect = 6e-06
 Identities = 12/66 (18%), Positives = 19/66 (28%)

Query: 385 HRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIR 444
           +     +        CP C   + S  +   H+R       CP C K F+       H+ 
Sbjct: 62  YLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVC 121

Query: 445 THTGGT 450
                 
Sbjct: 122 KKHNIC 127

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 44.2 bits (103), Expect = 8e-06
 Identities = 22/125 (17%), Positives = 37/125 (29%), Gaps = 14/125 (11%)

Query: 218 LLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYK 277
             + ++  H G       V  +       L    +   +          +     SYLY+
Sbjct: 9   GSKKYLSNHKG---IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYR 65

Query: 278 HEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKS 337
                      +S +   F C +C   F+   +L+ HI+        VC  C K F    
Sbjct: 66  LL---------ASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTD 114

Query: 338 YLYKH 342
               H
Sbjct: 115 SALDH 119

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 45.6 bits (108), Expect = 4e-07
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHS 255
              +  GE PFKC  CD+ F  ++ L  H +TH+
Sbjct: 3   SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHA 36

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 39.8 bits (93), Expect = 4e-05
 Identities = 13/31 (41%), Positives = 19/31 (61%)

Query: 289 SSSSEKPFKCKVCDKAFADKSNLRAHIQTHS 319
           S + E PFKC  CD+ F  ++ L  H +TH+
Sbjct: 6   SGAGENPFKCSKCDRVFTQRNYLVQHERTHA 36

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 36.8 bits (85), Expect = 6e-04
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 249 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 279
           +   + +   PF C KC + F  ++YL +HE
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHE 32

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 36.8 bits (85), Expect = 6e-04
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 313 AHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
           +   + +   PF C KC + F  ++YL +HE
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHE 32

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 44.9 bits (106), Expect = 7e-07
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 224 RTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC 265
            +    K   C++C K F D  +L  H  +HS  KP+     
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 43.4 bits (102), Expect = 2e-06
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 289 SSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC 329
           S  + K   C++C K F D  +L  H  +HS  KP+     
Sbjct: 6   SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 42.6 bits (100), Expect = 4e-06
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVC 237
             C  C K F   + L  H  +H+GEKP+     
Sbjct: 13  VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 47.9 bits (113), Expect = 6e-06
 Identities = 27/241 (11%), Positives = 56/241 (23%), Gaps = 19/241 (7%)

Query: 51  DYASDSSDLDDDDDDPRLQINEDEAEMSDPVSTSSQSSSEPVASFDPAYDHLYNLTQLAE 110
             +S   +   +  D       D+       +T+   +S     +               
Sbjct: 10  GKSSGKGNDSTERSDDGSSQLRDKQNNKAGPATTEPGTSNR-EQYRARPGIASVQRATES 68

Query: 111 VSLAYFNQSNSFNRKSVICNTKDVDTSTANNNNNESFQCRDCGKHYSTSSNLARHRQIHR 170
             L   N       K        V+  +   +  +        K    +           
Sbjct: 69  AELPMKNNDEGTPDKKGNTRGDLVNEHSEAKDEADEATQ----KQAKDTDKSKAQVTYSD 124

Query: 171 SPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEK 230
           +  +             V     S       +I +    S   S+     G   T +   
Sbjct: 125 TGINNANELSRSGN---VDNEGGSNQKPMSTRIAEAT--SAIVSKHPARVGLPPTASSGH 179

Query: 231 PFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSS 290
            ++C VC        +L AH+ +H                L S   +   +  + S+ + 
Sbjct: 180 GYQCHVCSAVLFSPLDLDAHVASHGL---------HGNMTLTSSEIQRHITEFISSWQNH 230

Query: 291 S 291
            
Sbjct: 231 P 231

>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens} Length = 126

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 9/126 (7%)

Query: 229 EKPFKCKVCDKAFADKSNLRAHIQT-HSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSY 287
           EKP +C  CD+        +A  Q  H  +K F C  C    A + Y+  ++   C   Y
Sbjct: 2   EKP-RCAGCDELIFSNEYTQAENQNWH--LKHFCCFDCDSILAGEIYVMVNDKPVCKPCY 58

Query: 288 DSSSSEKPFKCKVCDKAFADKSNLRAHIQT--HSKVKPFVCEKCGKAFALKSYLYKHEDS 345
             + +     C+ C  A   +     +     H+  + F+C  C K    + ++      
Sbjct: 59  VKNHAV---VCQGCHNAIDPEVQRVTYNNFSWHASTECFLCSCCSKCLIGQKFMPVEGMV 115

Query: 346 SCLKSY 351
            C    
Sbjct: 116 FCSVEC 121

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 39.8 bits (93), Expect = 5e-05
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 5/42 (11%)

Query: 218 LLQGHIRTHTGEKP---FKCKV--CDKAFADKSNLRAHIQTH 254
           L +G I  +  E P   F+C    C K F  + N+R+HIQTH
Sbjct: 2   LPRGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 38.3 bits (89), Expect = 2e-04
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 284 LKSYDSSSSEKPFKCKV--CDKAFADKSNLRAHIQTH 318
           +  Y     +K F+C    C K F  + N+R+HIQTH
Sbjct: 7   IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 38.0 bits (89), Expect = 1e-04
 Identities = 15/28 (53%), Positives = 18/28 (64%)

Query: 203 ICQCPHCSKSFSRPWLLQGHIRTHTGEK 230
           +C   +C K F+R   LQ H RTHTGEK
Sbjct: 4   MCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEK 230
            C  C+++F+R   L+ H R+HT EK
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEK 29

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 36.2 bits (84), Expect = 6e-04
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 198 RTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEK 230
           + H  IC    C K + +   L+ H+R HTGE+
Sbjct: 7   KQH--ICHIQGCGKVYGKTSHLRAHLRWHTGER 37

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	451
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.98
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.93
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.88
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.88
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.88
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.87
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.87
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.87
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.87
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.86
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.86
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.78
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.76
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.76
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.75
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.73
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.73
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.72
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.72
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.72
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.71
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.71
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.7
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.68
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.68
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.68
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.68
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.67
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.67
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.66
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.66
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.64
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.62
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.61
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.61
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.61
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.56
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.56
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.56
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.53
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.49
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.47
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.46
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.46
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.45
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.45
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.44
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.43
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.42
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.42
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.41
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.41
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.4
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.4
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.4
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.4
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.39
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.38
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.37
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.37
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.36
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.36
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.34
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.34
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.34
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.33
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.31
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.3
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.29
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.28
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.27
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.25
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.23
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.2
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.19
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.17
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.16
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.13
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.11
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.07
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.03
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.03
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.03
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.02
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.01
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.01
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.0
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.0
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.0
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.0
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.0
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.99
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.99
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.97
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.97
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.96
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.95
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.94
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.91
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.89
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.88
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.88
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.88
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.87
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.87
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.86
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.86
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.85
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.85
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.85
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.84
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.84
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.84
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.84
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.83
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.83
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.83
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.83
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.83
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.83
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.82
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.82
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.82
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.81
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.79
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.79
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.79
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.79
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.79
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.78
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.77
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.77
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.75
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.75
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.74
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.73
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.72
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.72
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.71
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.71
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.68
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.67
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.66
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.66
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.63
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.62
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.59
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.54
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.49
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.48
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.46
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.43
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.41
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.37
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.36
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.35
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.33
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.26
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.26
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.25
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.25
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.24
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.23
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.22
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.2
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.2
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.19
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.18
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.15
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.15
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.14
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.43
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.13
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.13
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.12
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.11
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.09
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.09
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.08
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.08
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.07
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.06
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.06
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.05
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.05
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.04
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.3
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.03
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.03
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.02
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.02
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.01
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.01
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.98
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.98
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.94
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.93
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.92
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.92
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.15
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.9
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.9
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.12
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.11
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.87
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.08
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.84
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.82
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.71
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.71
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.66
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.56
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.08
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.74
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.49
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.33
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.31
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.23
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.15
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.73
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.1
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	92.29
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	90.96
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	86.37
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	85.11
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	84.57
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	80.13
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	80.06

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=8.8e-38  Score=271.60  Aligned_cols=181  Identities=37%  Similarity=0.740  Sum_probs=121.3

Q ss_pred             HhHHHHHHHcCCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccCChHHHHHHHHHhcCCCce
Q psy18077        245 SNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPF  324 (451)
Q Consensus       245 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  324 (451)
                      ..|..|++.|.++++|.|++|++.|.+...|..|++.|        .++++|.|+.|++.|.+...|..|+++|+++++|
T Consensus         7 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h--------~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   78 (190)
T 2i13_A            7 SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTH--------TGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPY   78 (190)
T ss_dssp             ------------------------CCSSHHHHHGGGCC-----------CCEECTTTCCEESSHHHHHHHHHHHHCCCCE
T ss_pred             ccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHc--------CCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCc
Confidence            45566666666677777777777777777777776655        5566777777777777777777777777777777


Q ss_pred             ecccCcccccChhhHHhcccccCCCccCCCCCcccCcccccccccccccccCCChHHHHHHHHhccCCCCCCCcccCccc
Q psy18077        325 VCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCG  404 (451)
Q Consensus       325 ~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~  404 (451)
                      .|+.|++.|.+...|..|++.+.+               ..+|.|++|++.|.+...|..|+++|++   +++|.|++|+
T Consensus        79 ~C~~C~~~f~~~~~l~~H~~~h~~---------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~  140 (190)
T 2i13_A           79 KCPECGKSFSQRANLRAHQRTHTG---------------EKPYACPECGKSFSQLAHLRAHQRTHTG---EKPYKCPECG  140 (190)
T ss_dssp             ECTTTCCEESCHHHHHHHHHHHHT---------------CCCEECTTTCCEESSHHHHHHHHHHHHC---CCCEECTTTC
T ss_pred             cCcccCCccCCHHHHHHHHHhcCC---------------CCCCcCCCCCCccCCHHHHHHHHHHhCC---CCCeECCCCC
Confidence            888888778777777777754432               2368888888888888889999998886   7899999999


Q ss_pred             cccCChHHHHHHHHHcCC--ccccccccccCCChhhHHHHHhhhcCCCC
Q psy18077        405 KLYVSMPAYSMHLRTHNQ--ICQCPHCSKSFSRPWLLQGHIRTHTGGTN  451 (451)
Q Consensus       405 ~~f~~~~~l~~H~~~H~~--~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  451 (451)
                      +.|.+...|..|+++|++  +|+|++|++.|.+...|..|+++|+|++|
T Consensus       141 ~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~  189 (190)
T 2i13_A          141 KSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT  189 (190)
T ss_dssp             CEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC-----
T ss_pred             cccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            999999999999999865  49999999999999999999999999886

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=7.7e-37  Score=265.64  Aligned_cols=181  Identities=36%  Similarity=0.763  Sum_probs=133.9

Q ss_pred             HHHHHHHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCe
Q psy18077        217 WLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPF  296 (451)
Q Consensus       217 ~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~  296 (451)
                      ..|..|++.|.++++|.|++|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|++.|        .++++|
T Consensus         7 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h--------~~~~~~   78 (190)
T 2i13_A            7 SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTH--------TGEKPY   78 (190)
T ss_dssp             ------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHH--------HCCCCE
T ss_pred             ccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhc--------CCCCCc
Confidence            567788888888889999999999999999999999888888999999999999999999998877        567889


Q ss_pred             eccccccccCChHHHHHHHHHhcCCCceecccCcccccChhhHHhcccccCCCccCCCCCcccCcccccccccccccccC
Q psy18077        297 KCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHY  376 (451)
Q Consensus       297 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f  376 (451)
                      .|+.|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|++.+.+               ..+|.|++|++.|
T Consensus        79 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---------------~~~~~C~~C~~~f  143 (190)
T 2i13_A           79 KCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG---------------EKPYKCPECGKSF  143 (190)
T ss_dssp             ECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHC---------------CCCEECTTTCCEE
T ss_pred             cCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCC---------------CCCeECCCCCccc
Confidence            9999999999999999999999999999999999999999999999865433               3478999999999


Q ss_pred             CChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHcCCc
Q psy18077        377 STSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI  423 (451)
Q Consensus       377 ~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~  423 (451)
                      .+...|..|+++|++   +++|.|++|++.|.+...|..|+++|++.
T Consensus       144 ~~~~~L~~H~~~H~~---~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  187 (190)
T 2i13_A          144 SREDNLHTHQRTHTG---EKPYKCPECGKSFSRRDALNVHQRTHTGK  187 (190)
T ss_dssp             SCHHHHHHHHHHHHC---CCCEECTTTCCEESSHHHHHHHHTTC---
T ss_pred             CCHHHHHHHHHhcCC---CCCeECCCCCCccCCHHHHHHHHHhcCCC
Confidence            999999999999986   88999999999999999999999999764

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.98  E-value=3.1e-32  Score=236.57  Aligned_cols=168  Identities=27%  Similarity=0.512  Sum_probs=126.1

Q ss_pred             CCCeec--ccccccccChHHHHhchhhcCCCCcCCCCCCcCeec--cccccccCChHHHHHHHHHhcCCCceecc--cCc
Q psy18077        257 VKPFVC--EKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKC--KVCDKAFADKSNLRAHIQTHSKVKPFVCE--KCG  330 (451)
Q Consensus       257 ~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~  330 (451)
                      .++|.|  +.|++.|.+...|..|++.|        .++++|.|  ..|++.|.+...|..|+++|+++++|.|+  .|+
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h--------~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~   81 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKH--------TGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCD   81 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHH--------HCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCC
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhc--------CCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCC
Confidence            344555  34555555555555555544        44556666  56777777777777777777777777777  677


Q ss_pred             ccccChhhHHhcccccCCCccCCCCCcccCccccccccc--ccccccCCChHHHHHHHHhccCCCCCCCcccCc--cccc
Q psy18077        331 KAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQC--RDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQ--CGKL  406 (451)
Q Consensus       331 ~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~--C~~~  406 (451)
                      +.|.+...|..|++..+.             ....+|.|  +.|++.|.+...|..|+++|++   ++||.|+.  |++.
T Consensus        82 ~~f~~~~~l~~H~~~~h~-------------~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~---~~~~~C~~~~C~k~  145 (190)
T 1tf6_A           82 LRFTTKANMKKHFNRFHN-------------IKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ---QLPYECPHEGCDKR  145 (190)
T ss_dssp             CEESCHHHHHHHHHTTSS-------------TTTSCCEECSSSSCEECSSHHHHHHHHGGGSS---SCSSBCCSSSCCCB
T ss_pred             CccCCHHHHHHHHHHhcC-------------CCcceeeCCCCCCccccCCHHHHHHHHHHhCC---CCCccCCCCCCCch
Confidence            777777777777632111             11236888  8899999999999999999986   89999988  9999


Q ss_pred             cCChHHHHHHHHHcCCcccccc---ccccCCChhhHHHHHhhhcCC
Q psy18077        407 YVSMPAYSMHLRTHNQICQCPH---CSKSFSRPWLLQGHIRTHTGG  449 (451)
Q Consensus       407 f~~~~~l~~H~~~H~~~~~C~~---C~~~f~~~~~l~~H~~~h~~~  449 (451)
                      |.+...|..|+++|++ |+|.+   |++.|.+...|..|+++|+|+
T Consensus       146 F~~~~~L~~H~~~H~~-~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          146 FSLPSRLKRHEKVHAG-YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             CSSHHHHHHHHTSSCS-CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             hcCHHHHHHHHHHhCC-CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            9999999999999998 99999   999999999999999999985

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=1.6e-30  Score=225.77  Aligned_cols=166  Identities=31%  Similarity=0.616  Sum_probs=110.5

Q ss_pred             CCccc--CcCccccCCHHHHHHHHHHhcCCCCccc--ccchhhcCChHhHHHHHHHcCCCCCeecc--cccccccChHHH
Q psy18077        202 QICQC--PHCSKSFSRPWLLQGHIRTHTGEKPFKC--KVCDKAFADKSNLRAHIQTHSKVKPFVCE--KCGKAFALKSYL  275 (451)
Q Consensus       202 ~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l  275 (451)
                      .+|.|  +.|++.|.+...|..|++.|.++++|.|  ..|++.|.+...|..|++.|.++++|.|.  .|++.|.+...|
T Consensus        11 ~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   90 (190)
T 1tf6_A           11 KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANM   90 (190)
T ss_dssp             CCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHH
T ss_pred             cceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHH
Confidence            36677  5677777777777777777777777777  66777777777777777777777777777  677777777777


Q ss_pred             HhchhhcCCCCcCCCCCCcCeec--cccccccCChHHHHHHHHHhcCCCceeccc--CcccccChhhHHhcccccCCCcc
Q psy18077        276 YKHEDSSCLKSYDSSSSEKPFKC--KVCDKAFADKSNLRAHIQTHSKVKPFVCEK--CGKAFALKSYLYKHEDSSCLKSY  351 (451)
Q Consensus       276 ~~H~~~~~~~~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~~~~~~~  351 (451)
                      ..|++..+.      .+.++|.|  ..|++.|.+...|..|+++|++++||.|+.  |++.|.+...|.+|++.|.+   
T Consensus        91 ~~H~~~~h~------~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---  161 (190)
T 1tf6_A           91 KKHFNRFHN------IKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---  161 (190)
T ss_dssp             HHHHHTTSS------TTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---
T ss_pred             HHHHHHhcC------CCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---
Confidence            777633221      23566777  667777777777777777777777666655  66666666666666543221   


Q ss_pred             CCCCCcccCccccccccccc---ccccCCChHHHHHHHHhccC
Q psy18077        352 DSSSNGHLNKFTTISFQCRD---CGKHYSTSSNLARHRQIHRS  391 (451)
Q Consensus       352 ~~~~~~~~~~~~~~~~~C~~---C~~~f~~~~~L~~H~~~H~~  391 (451)
                                     |.|..   |++.|.+...|..|+++|++
T Consensus       162 ---------------~~C~~~~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          162 ---------------YPCKKDDSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             ---------------CCCCSTTTCCCCCSCHHHHHHHHTTCC-
T ss_pred             ---------------CcCCCCCcCCCccccHHHHHHHHHhhcC
Confidence                           45555   66666666666666655553

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=2.1e-26  Score=192.84  Aligned_cols=147  Identities=34%  Similarity=0.712  Sum_probs=114.0

Q ss_pred             ccccccccccccCChHhHHHHHhhhcCCCCCCCcccccccccccCHHHHHHHHHHcCCCcccCcCccccCCHHHHHHHHH
Q psy18077        145 ESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIR  224 (451)
Q Consensus       145 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~C~~C~~~f~~~~~L~~H~~  224 (451)
                      .+|.|..|++.|.+...|..|++.++...+.++|.|..|+                     |..|++.|.+...|..|++
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~---------------------C~~c~~~f~~~~~l~~H~~   60 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG---------------------CSRELRPFKAQYMLVVHMR   60 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTT---------------------CTTTTCCCSSHHHHHHHTH
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCC---------------------ccchhhhhhhHHHHHHHHH
Confidence            4577888888888888888888743222256778777663                     7777888888888888888


Q ss_pred             HhcCCCCccccc--chhhcCChHhHHHHHHHcCCCCCeeccc--ccccccChHHHHhch-hhcCCCCcCCCCCCcCeecc
Q psy18077        225 THTGEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEK--CGKAFALKSYLYKHE-DSSCLKSYDSSSSEKPFKCK  299 (451)
Q Consensus       225 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~~~~~~~~~~~~~~~~~C~  299 (451)
                      .|+++++|.|.+  |++.|.+...|..|++.|.++++|.|++  |++.|.+...|..|+ +.|        .++++|.|+
T Consensus        61 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H--------~~~~~~~C~  132 (155)
T 2gli_A           61 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH--------SNEKPYVCK  132 (155)
T ss_dssp             HHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTT--------CSCCCEECC
T ss_pred             hcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhc--------CCCCCeeCC
Confidence            888888888875  8888888888888888888888888887  888888888888887 555        566778887


Q ss_pred             c--cccccCChHHHHHHHHHhcC
Q psy18077        300 V--CDKAFADKSNLRAHIQTHSK  320 (451)
Q Consensus       300 ~--C~~~f~~~~~l~~H~~~h~~  320 (451)
                      +  |++.|.+...|..|+++|+|
T Consensus       133 ~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          133 LPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             STTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCCCccccCCHHHHHHHHHhhcC
Confidence            7  88888888888888777764

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=2.4e-26  Score=192.48  Aligned_cols=137  Identities=28%  Similarity=0.500  Sum_probs=92.4

Q ss_pred             cCeeccccccccCChHHHHHHHH---HhcCCCceecccC-----cccccChhhHHhcccccCCCccCCCCCcccCccccc
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQ---THSKVKPFVCEKC-----GKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTI  365 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~---~h~~~~~~~C~~C-----~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~  365 (451)
                      .+|.|+.|++.|.+...|..|++   +|.++++|.|++|     ++.|.+...|..|++.+.+               ..
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~---------------~~   66 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG---------------EK   66 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC---------------CC
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCC---------------CC
Confidence            34566666666666666666665   4555566665532     3666666666666654322               23


Q ss_pred             cccccc--ccccCCChHHHHHHHHhccCCCCCCCcccCc--cccccCChHHHHHHH-HHcCCc--ccccc--ccccCCCh
Q psy18077        366 SFQCRD--CGKHYSTSSNLARHRQIHRSPDDTKARTCPQ--CGKLYVSMPAYSMHL-RTHNQI--CQCPH--CSKSFSRP  436 (451)
Q Consensus       366 ~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~H~~~--~~C~~--C~~~f~~~  436 (451)
                      +|.|++  |++.|.+...|..|+++|++   +++|.|++  |++.|.+...|..|+ ++|.+.  |+|++  |++.|.+.
T Consensus        67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~  143 (155)
T 2gli_A           67 PHKCTFEGCRKSYSRLENLKTHLRSHTG---EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDP  143 (155)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTT---CCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSH
T ss_pred             CccCCCCCCCCcccCHHHHHHHHHHcCC---CCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCH
Confidence            567764  77777777777777777775   67777777  777777777777777 667543  77877  88888888


Q ss_pred             hhHHHHHhhhcC
Q psy18077        437 WLLQGHIRTHTG  448 (451)
Q Consensus       437 ~~l~~H~~~h~~  448 (451)
                      ..|..|+++|||
T Consensus       144 ~~L~~H~~~hhg  155 (155)
T 2gli_A          144 SSLRKHVKTVHG  155 (155)
T ss_dssp             HHHHHHHHHSCC
T ss_pred             HHHHHHHHhhcC
Confidence            888888877775

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=1.9e-23  Score=167.74  Aligned_cols=113  Identities=27%  Similarity=0.577  Sum_probs=82.1

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccCcccccChhhHHhcccccCCCccCCCCCcccCcccccccccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCR  370 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~C~  370 (451)
                      +++++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|++.++            ......+|.|+
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~------------~~~~~~~~~C~   70 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNC------------MNRSEQVFTCS   70 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCC------------CCSCCCCEECS
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhh------------cCCCCCCeECC
Confidence            567889999999999999999999999998888888888888888877777765321            11223356676


Q ss_pred             cccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHH
Q psy18077        371 DCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLR  418 (451)
Q Consensus       371 ~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  418 (451)
                      +|++.|.+...|..|+++|++   ++||.|++|++.|.+...|..|++
T Consensus        71 ~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~  115 (124)
T 2dlq_A           71 VCQETFRRRMELRLHMVSHTG---EMPYKCSSCSQQFMQKKDLQSHMI  115 (124)
T ss_dssp             SSCCEESSHHHHHHHHHHHSS---SCSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCccCCHHHHHHHHHHcCC---CCCccCCCccchhCCHHHHHHHHH
Confidence            777777666667777666664   566666666666666666666665

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=6.9e-23  Score=164.43  Aligned_cols=114  Identities=35%  Similarity=0.742  Sum_probs=95.0

Q ss_pred             cCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccC
Q psy18077        227 TGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFA  306 (451)
Q Consensus       227 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~  306 (451)
                      .++++|.|.+|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+..++.     +.++++|.|.+|++.|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~-----~~~~~~~~C~~C~~~f~   77 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM-----NRSEQVFTCSVCQETFR   77 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCC-----CSCCCCEECSSSCCEES
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhc-----CCCCCCeECCCCCCccC
Confidence            3567788888888888888888888888888888888888888888888888775422     25678899999999999


Q ss_pred             ChHHHHHHHHHhcCCCceecccCcccccChhhHHhcccc
Q psy18077        307 DKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDS  345 (451)
Q Consensus       307 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  345 (451)
                      +...|..|+++|++++||.|++|++.|.+...|.+|++.
T Consensus        78 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  116 (124)
T 2dlq_A           78 RRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK  116 (124)
T ss_dssp             SHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999864

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.88  E-value=6.3e-23  Score=163.37  Aligned_cols=112  Identities=29%  Similarity=0.669  Sum_probs=82.2

Q ss_pred             CCCcCeeccc--cccccCChHHHHHHHHHhcCCCceecc--cCcccccChhhHHhcccccCCCccCCCCCcccCcccccc
Q psy18077        291 SSEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCE--KCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTIS  366 (451)
Q Consensus       291 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~  366 (451)
                      +++++|.|.+  |++.|.+...|..|+++|.++++|.|+  .|++.|.+...|..|++.+.+               ..+
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---------------~~~   66 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG---------------VKP   66 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHC---------------CCC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCC---------------CCC
Confidence            4678888987  999999999999998888888888887  577777777777777654322               235


Q ss_pred             cccccccccCCChHHHHHHHHhccCCCCCCCccc--CccccccCChHHHHHHHHHc
Q psy18077        367 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTC--PQCGKLYVSMPAYSMHLRTH  420 (451)
Q Consensus       367 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~H  420 (451)
                      |.|++|++.|.+...|..|+++|++   +++|.|  +.|++.|.+...|..|+++|
T Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           67 FQCKTCQRKFSRSDHLKTHTRTHTG---EKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHHT---CCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             ccCCccCchhCCHHHHHHHHHHhcC---CCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            6777777777777777777777765   666777  56777777777777776665

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.88  E-value=1.1e-23  Score=169.93  Aligned_cols=108  Identities=25%  Similarity=0.483  Sum_probs=90.2

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVC  301 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C  301 (451)
                      |.++|.|+++|.|.+|++.|.+...|..|+++|.+++||.|++|++.|.+...|..|++.|        ++++||.|++|
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H--------~~~k~~~C~~C   84 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHH--------TGERRYQCLAC   84 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHH--------HTCCCEEESSS
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhcccc--------CCCccccCCCC
Confidence            3456778888888888888888888888888888888888888888888888888888877        77888999999


Q ss_pred             ccccCChHHHHHHHHHhcCCC------ceecccCcccccChh
Q psy18077        302 DKAFADKSNLRAHIQTHSKVK------PFVCEKCGKAFALKS  337 (451)
Q Consensus       302 ~~~f~~~~~l~~H~~~h~~~~------~~~C~~C~~~f~~~~  337 (451)
                      ++.|.+...|..|+++|++++      +|+|..|++.|....
T Consensus        85 ~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~  126 (133)
T 2lt7_A           85 GKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQY  126 (133)
T ss_dssp             CCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCCC
T ss_pred             CCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhcc
Confidence            999999999999988887654      588888988876543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.87  E-value=1.1e-22  Score=161.90  Aligned_cols=111  Identities=33%  Similarity=0.783  Sum_probs=91.5

Q ss_pred             cCCCCccccc--chhhcCChHhHHHHHHHcCCCCCeecc--cccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccc
Q psy18077        227 TGEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCE--KCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCD  302 (451)
Q Consensus       227 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~  302 (451)
                      .++++|.|.+  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|++.|        .++++|.|.+|+
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h--------~~~~~~~C~~C~   73 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH--------TGVKPFQCKTCQ   73 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHH--------HCCCCEECTTTC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHc--------CCCCCccCCccC
Confidence            4567788876  888888888888888888888888887  6888888888888888777        567788888888


Q ss_pred             cccCChHHHHHHHHHhcCCCceec--ccCcccccChhhHHhcccc
Q psy18077        303 KAFADKSNLRAHIQTHSKVKPFVC--EKCGKAFALKSYLYKHEDS  345 (451)
Q Consensus       303 ~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~~  345 (451)
                      +.|.+...|..|+++|+++++|.|  +.|++.|.+...|.+|++.
T Consensus        74 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  118 (119)
T 2jp9_A           74 RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM  118 (119)
T ss_dssp             CEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred             chhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhc
Confidence            888888888888888888888888  7888888888888888753

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.87  E-value=2e-23  Score=168.32  Aligned_cols=113  Identities=19%  Similarity=0.334  Sum_probs=99.2

Q ss_pred             HHHHcCCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        250 HIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       250 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      |.++|.|+++|.|++|++.|.+...|..|++.|        .++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H--------~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   84 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIH--------SWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLAC   84 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHH--------HCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSS
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHc--------CCCCCeeCCccCeecccccchhhhccccCCCccccCCCC
Confidence            445688999999999999999999999999988        788999999999999999999999999999999999999


Q ss_pred             cccccChhhHHhcccccCCCccCCCCCcccCcccccccccccccccCCCh
Q psy18077        330 GKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTS  379 (451)
Q Consensus       330 ~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~  379 (451)
                      ++.|.+.+.|..|++.+++....         ....+|+|.+|++.|...
T Consensus        85 ~k~F~~~~~L~~H~~~hh~~~p~---------~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           85 GKSFINYQFMSSHIKSVHSQDPS---------GDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             CCEESSHHHHHHHHHHHTCCCTT---------SSSCCEEECCCCSSCCCC
T ss_pred             CCCcCCHHHHHHHhHHhcCCCCC---------CCCCCeecCCCCchhhhc
Confidence            99999999999999887664311         112368899998887654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.87  E-value=1.3e-22  Score=162.80  Aligned_cols=113  Identities=32%  Similarity=0.583  Sum_probs=98.0

Q ss_pred             CCCceecc--cCcccccChhhHHhcccccCCCccCCCCCcccCcccccccccccccccCCChHHHHHHHHhccCCCCCCC
Q psy18077        320 KVKPFVCE--KCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKA  397 (451)
Q Consensus       320 ~~~~~~C~--~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  397 (451)
                      ++++|.|+  .|++.|.+...|..|++.+                ...+|.|++|++.|.+...|..|+++|++   +++
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h----------------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~   62 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH----------------GPRVHVCAECGKAFVESSKLKRHQLVHTG---EKP   62 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG----------------SCCCEECTTTCCEESSHHHHHHHGGGTSC---CCC
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc----------------CCCCeECCCCCchhCCHHHHHHHHHHcCC---CCC
Confidence            36789999  8999999999999998643                34479999999999999999999999986   899


Q ss_pred             cccCc--cccccCChHHHHHHHHHcCCc--ccccc--ccccCCChhhHHHHHhhhcCCCC
Q psy18077        398 RTCPQ--CGKLYVSMPAYSMHLRTHNQI--CQCPH--CSKSFSRPWLLQGHIRTHTGGTN  451 (451)
Q Consensus       398 ~~C~~--C~~~f~~~~~l~~H~~~H~~~--~~C~~--C~~~f~~~~~l~~H~~~h~~~~~  451 (451)
                      |.|.+  |++.|.+...|..|+++|++.  |.|++  |++.|.+...|..|+++|++++|
T Consensus        63 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~  122 (124)
T 1ubd_C           63 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN  122 (124)
T ss_dssp             EECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC----
T ss_pred             eeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHccccc
Confidence            99986  999999999999999999754  99964  99999999999999999999875

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.87  E-value=1.9e-22  Score=168.62  Aligned_cols=88  Identities=38%  Similarity=0.671  Sum_probs=59.1

Q ss_pred             cccccchhhcCChHhHHHHHHHcCCCCCeeccc--ccccccChHHHHhchhhcCCCCcCCCCCCcCeeccc--cccccCC
Q psy18077        232 FKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK--CGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKV--CDKAFAD  307 (451)
Q Consensus       232 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~  307 (451)
                      |.|.+|++.|.+...|..|++.|.++++|.|.+  |++.|.+...|..|++.|        .++++|.|.+  |++.|.+
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h--------~~~~~~~C~~~~C~k~f~~  134 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH--------TGEKPFKCEFEGCDRRFAN  134 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTT--------CSSCSBCCSSTTCCCCBSS
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhh--------CCCCCccCCCCCCCCccCC
Confidence            566666666666666666666666666666665  666666666666666655        5556677765  7777777


Q ss_pred             hHHHHHHHHHhcCCCceecc
Q psy18077        308 KSNLRAHIQTHSKVKPFVCE  327 (451)
Q Consensus       308 ~~~l~~H~~~h~~~~~~~C~  327 (451)
                      ...|..|+++|++++||.|.
T Consensus       135 ~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          135 SSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             HHHHHHSSTTTTSCCCSCSC
T ss_pred             HHHHHHHHHHhcCCCCCCCC
Confidence            77777777777777777664

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.86  E-value=4.3e-22  Score=166.42  Aligned_cols=122  Identities=25%  Similarity=0.485  Sum_probs=94.3

Q ss_pred             CCcCeeccccccccCChHHHHHHHHH-hcCCCceecccCcccccChhhHHhcccccCCCccCCCCCcccCcccccccccc
Q psy18077        292 SEKPFKCKVCDKAFADKSNLRAHIQT-HSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCR  370 (451)
Q Consensus       292 ~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~C~  370 (451)
                      ...+|.|..|++.|.+...|..|+++ |.+..+.....|                                   ..|.|+
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~-----------------------------------~~~~C~   66 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-----------------------------------YWEECP   66 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCC-----------------------------------CBTTCT
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccc-----------------------------------cccCCC
Confidence            44567777777777777777777766 554443222111                                   147888


Q ss_pred             cccccCCChHHHHHHHHhccCCCCCCCcccCc--cccccCChHHHHHHHHHcCCc--ccccc--ccccCCChhhHHHHHh
Q psy18077        371 DCGKHYSTSSNLARHRQIHRSPDDTKARTCPQ--CGKLYVSMPAYSMHLRTHNQI--CQCPH--CSKSFSRPWLLQGHIR  444 (451)
Q Consensus       371 ~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~--~~C~~--C~~~f~~~~~l~~H~~  444 (451)
                      +|++.|.+...|..|+++|++   +++|.|.+  |++.|.+...|..|+++|++.  |+|.+  |++.|.+...|..|++
T Consensus        67 ~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~  143 (155)
T 2rpc_A           67 REGKSFKAKYKLVNHIRVHTG---EKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH  143 (155)
T ss_dssp             TSSCCCSSHHHHHHHTHHHHC---CCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSST
T ss_pred             CcccccCCHHHHHHHHHhcCC---CCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHH
Confidence            899999999999999988886   78899988  999999999999999988764  88987  9999999999999999


Q ss_pred             hhcCCCC
Q psy18077        445 THTGGTN  451 (451)
Q Consensus       445 ~h~~~~~  451 (451)
                      +|+|++|
T Consensus       144 ~H~~~k~  150 (155)
T 2rpc_A          144 VHTSDKS  150 (155)
T ss_dssp             TTTSCCC
T ss_pred             HhcCCCC
Confidence            9988876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.86  E-value=3e-22  Score=160.65  Aligned_cols=113  Identities=38%  Similarity=0.750  Sum_probs=63.6

Q ss_pred             CcccC--cCccccCCHHHHHHHHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeeccc--ccccccChHHHHhc
Q psy18077        203 ICQCP--HCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK--CGKAFALKSYLYKH  278 (451)
Q Consensus       203 ~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H  278 (451)
                      +|.|+  .|++.|.+...|..|+++| +.++|.|.+|++.|.+...|..|++.|.++++|.|.+  |++.|.+...|..|
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H   83 (124)
T 1ubd_C            5 TIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH   83 (124)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHH
T ss_pred             cccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHH
Confidence            34555  5555555555666666555 5555666666666666666666666666666666654  66666666666666


Q ss_pred             hhhcCCCCcCCCCCCcCeecc--ccccccCChHHHHHHHHHhcCCCce
Q psy18077        279 EDSSCLKSYDSSSSEKPFKCK--VCDKAFADKSNLRAHIQTHSKVKPF  324 (451)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  324 (451)
                      ++.|        .++++|.|+  .|++.|.+...|..|+++|++++++
T Consensus        84 ~~~h--------~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           84 VRIH--------TGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHH--------HCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHh--------CCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            5555        445556663  3666666666666666666655554

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.78  E-value=8.4e-19  Score=136.23  Aligned_cols=88  Identities=27%  Similarity=0.514  Sum_probs=82.2

Q ss_pred             cccccccccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHcCCc--cccccccccCCChhh
Q psy18077        361 KFTTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI--CQCPHCSKSFSRPWL  438 (451)
Q Consensus       361 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~--~~C~~C~~~f~~~~~  438 (451)
                      .....+|.|.+|++.|.+...|..|+++|++   +++|.|.+|++.|.+...|..|+++|++.  |+|.+|++.|.+...
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   88 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTD---ERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRT   88 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCC---SCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCC---CCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHH
Confidence            3445689999999999999999999999986   89999999999999999999999999764  999999999999999


Q ss_pred             HHHHHhhhcCCCC
Q psy18077        439 LQGHIRTHTGGTN  451 (451)
Q Consensus       439 l~~H~~~h~~~~~  451 (451)
                      |..|+++|++++|
T Consensus        89 L~~H~~~H~~~~~  101 (106)
T 2ee8_A           89 LAVHKTLHMQTSS  101 (106)
T ss_dssp             HHHHHHHTTSCCC
T ss_pred             HHHHHHHhCCCCC
Confidence            9999999999885

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=4.5e-19  Score=135.06  Aligned_cols=85  Identities=27%  Similarity=0.531  Sum_probs=80.2

Q ss_pred             ccccccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHcCCc--cccccccccCCChhhHHH
Q psy18077        364 TISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI--CQCPHCSKSFSRPWLLQG  441 (451)
Q Consensus       364 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~--~~C~~C~~~f~~~~~l~~  441 (451)
                      ..+|.|.+|++.|.+...|..|+++|++   +++|.|..|++.|.+...|..|+++|++.  |+|++|++.|.+...|..
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMRCHTG---VKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGGGCCC---CCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHhcCC---CCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            3479999999999999999999999986   89999999999999999999999999764  999999999999999999


Q ss_pred             HHhhhcCCCC
Q psy18077        442 HIRTHTGGTN  451 (451)
Q Consensus       442 H~~~h~~~~~  451 (451)
                      |+++|+|+++
T Consensus        83 H~~~h~~~~~   92 (96)
T 2dmd_A           83 HLRSHTGDSG   92 (96)
T ss_dssp             HHTTCCSCCC
T ss_pred             HHHHhcCCCC
Confidence            9999999874

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.76  E-value=4.8e-19  Score=133.18  Aligned_cols=84  Identities=26%  Similarity=0.556  Sum_probs=77.0

Q ss_pred             cccccc--cccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHcCCc--cccccccccCCChhhHH
Q psy18077        365 ISFQCR--DCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI--CQCPHCSKSFSRPWLLQ  440 (451)
Q Consensus       365 ~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~--~~C~~C~~~f~~~~~l~  440 (451)
                      .+|.|+  .|++.|.+...|..|+++|++   .++|.|..|++.|.+...|..|+++|++.  |.|++|++.|.+...|.
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   79 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTG---QKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK   79 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHC---CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCC---CCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHH
Confidence            479998  599999999999999999996   89999999999999999999999999654  99999999999999999


Q ss_pred             HHHhhhcCCCC
Q psy18077        441 GHIRTHTGGTN  451 (451)
Q Consensus       441 ~H~~~h~~~~~  451 (451)
                      .|+++|+|+++
T Consensus        80 ~H~~~H~~~k~   90 (90)
T 1a1h_A           80 RHTKIHLRQKD   90 (90)
T ss_dssp             HHHGGGGC---
T ss_pred             HHHHHhcccCC
Confidence            99999999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.76  E-value=4.2e-19  Score=130.90  Aligned_cols=80  Identities=38%  Similarity=0.672  Sum_probs=75.7

Q ss_pred             ccccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHcCCc--cccccccccCCChhhHHHHH
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI--CQCPHCSKSFSRPWLLQGHI  443 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~--~~C~~C~~~f~~~~~l~~H~  443 (451)
                      +|.|++|++.|.+...|..|+++|++   +++|.|..|++.|.+...|..|+++|++.  |+|++|++.|.+...|..|+
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   77 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSD---TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHS   77 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHT---CCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCC---CCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHH
Confidence            58999999999999999999999986   89999999999999999999999999754  99999999999999999999


Q ss_pred             hhhcC
Q psy18077        444 RTHTG  448 (451)
Q Consensus       444 ~~h~~  448 (451)
                      ++|+|
T Consensus        78 ~~H~g   82 (82)
T 2kmk_A           78 RKHTG   82 (82)
T ss_dssp             HHHC-
T ss_pred             HhhCC
Confidence            99986

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.75  E-value=2.7e-18  Score=133.29  Aligned_cols=92  Identities=35%  Similarity=0.665  Sum_probs=78.6

Q ss_pred             cCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccC
Q psy18077        227 TGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFA  306 (451)
Q Consensus       227 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~  306 (451)
                      ..+++|.|.+|++.|.+...|..|++.|.++++|.|.+|++.|.....|..|++.|        .++++|.|.+|++.|.
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h--------~~~~~~~C~~C~~~f~   84 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIH--------SKEKPFKCQECGKGFC   84 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGS--------CCCCTTSCSSSCCCCS
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHh--------CCCCCeECCCcCCccc
Confidence            34567888888888888888888888888888888888888888888888888777        6678899999999999


Q ss_pred             ChHHHHHHHHHhcCCCceec
Q psy18077        307 DKSNLRAHIQTHSKVKPFVC  326 (451)
Q Consensus       307 ~~~~l~~H~~~h~~~~~~~C  326 (451)
                      ....|..|+++|+++++|.+
T Consensus        85 ~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           85 QSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             SHHHHHHHHHHTTSCCCCCC
T ss_pred             CHHHHHHHHHHhCCCCCCcC
Confidence            99999999999999888864

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=5.5e-18  Score=128.98  Aligned_cols=85  Identities=40%  Similarity=0.773  Sum_probs=37.6

Q ss_pred             CCCcccccchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccCCh
Q psy18077        229 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADK  308 (451)
Q Consensus       229 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~  308 (451)
                      +++|.|.+|++.|.+...|..|++.|.++++|.|.+|++.|.....|..|++.|        .++++|.|.+|++.|...
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h--------~~~~~~~C~~C~~~f~~~   77 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH--------SDERPFKCQICPYASRNS   77 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHS--------CCCCCEECSSSSCEESSH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHh--------CCCCCccCCCCCCccCCH
Confidence            344444444444444444444444444444444444444444444444444333        333444444444444444


Q ss_pred             HHHHHHHHHhcCC
Q psy18077        309 SNLRAHIQTHSKV  321 (451)
Q Consensus       309 ~~l~~H~~~h~~~  321 (451)
                      ..|..|+++|+++
T Consensus        78 ~~l~~H~~~h~~~   90 (96)
T 2dmd_A           78 SQLTVHLRSHTGD   90 (96)
T ss_dssp             HHHHHHHTTCCSC
T ss_pred             HHHHHHHHHhcCC
Confidence            4444444444443

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=8.8e-18  Score=127.58  Aligned_cols=84  Identities=36%  Similarity=0.723  Sum_probs=77.5

Q ss_pred             ccccccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHcCC----ccccccccccCCChhhH
Q psy18077        364 TISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQ----ICQCPHCSKSFSRPWLL  439 (451)
Q Consensus       364 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~----~~~C~~C~~~f~~~~~l  439 (451)
                      ..+|.|.+|++.|.+...|..|+++|++   +++|.|..|++.|.+...|..|+++|++    +|+|++|++.|.+...|
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKLSHSG---EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHHHSCS---SCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCeECCCCCCccCChHHHHHHHHhcCC---CCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            3479999999999999999999999986   8999999999999999999999999974    49999999999999999


Q ss_pred             HHHHh-hhcCCC
Q psy18077        440 QGHIR-THTGGT  450 (451)
Q Consensus       440 ~~H~~-~h~~~~  450 (451)
                      ..|++ +|.++.
T Consensus        82 ~~H~~~~H~~~~   93 (95)
T 2yt9_A           82 NGHIKQVHSGPS   93 (95)
T ss_dssp             HHHHHHTSCCCS
T ss_pred             HHHHHHhcCCCC
Confidence            99996 677653

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.8e-18  Score=134.49  Aligned_cols=94  Identities=16%  Similarity=0.331  Sum_probs=79.5

Q ss_pred             HHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccc
Q psy18077        223 IRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCD  302 (451)
Q Consensus       223 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~  302 (451)
                      ++.|.++++|.|.+|++.|.+...|..|++.|  .++|.|.+|++.|.....|..|+. |        .++++|.|.+|+
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H--------~~~~~~~C~~C~   76 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-K--------CEYKKLTCLECM   76 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-H--------CSTGGGEEGGGT
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-c--------CCCCCccCcccc
Confidence            45677888889999999998888899998888  468888889888888888888885 6        677889999999


Q ss_pred             cccCChHHHHHHHH-HhcCCCceecc
Q psy18077        303 KAFADKSNLRAHIQ-THSKVKPFVCE  327 (451)
Q Consensus       303 ~~f~~~~~l~~H~~-~h~~~~~~~C~  327 (451)
                      +.|.....|..|++ +|.++++|.|.
T Consensus        77 ~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           77 RTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             EECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             chhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            99999999999986 78888888774

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=8.4e-19  Score=138.38  Aligned_cols=103  Identities=20%  Similarity=0.314  Sum_probs=85.6

Q ss_pred             HHHHHHHHHhcCCCCcccccchhhcCChHhHHHHHHH--cCCCCCee-cccccccc--cChHHHHhchhhcCCCCcCCCC
Q psy18077        217 WLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQT--HSKVKPFV-CEKCGKAF--ALKSYLYKHEDSSCLKSYDSSS  291 (451)
Q Consensus       217 ~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~~~~~~~~~~~  291 (451)
                      ..|..|+++|+++++|.|.+|++.|.+...|..|++.  |.+.+++. |.+|++.|  .....|..|++.|        .
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H--------~   76 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKE--------D   76 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSC--------C
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhcc--------C
Confidence            3467788889999999999999999999999999998  77677654 99999888  8888888888776        7


Q ss_pred             CCcCeeccccccccCChHHHHHHHHHhcCCCceecc
Q psy18077        292 SEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  327 (451)
Q Consensus       292 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (451)
                      ++++|.|.+|++.|.....|..|+++|+......++
T Consensus        77 ~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           77 AQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             CCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             CCcceECCCCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence            788899999999999999999999888766655444

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=5.1e-18  Score=131.97  Aligned_cols=88  Identities=23%  Similarity=0.355  Sum_probs=59.2

Q ss_pred             CCCcccccccccccCHHHHHHHHHHcCCCcccCcCccccCCHHHHHHHHHHhcCCCCcccccchhhcCChHhHHHHHH-H
Q psy18077        175 TKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQ-T  253 (451)
Q Consensus       175 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~  253 (451)
                      .++|.|.+|++.|.....|..|++.|..+|.|..|++.|.....|..|++ |.++++|.|.+|++.|.+...|..|++ .
T Consensus        14 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~   92 (107)
T 1wjp_A           14 KEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEV   92 (107)
T ss_dssp             CCCCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHT
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHH
Confidence            34444444444444444444444444446667777777777777777775 777888888888888888888888886 7


Q ss_pred             cCCCCCeecc
Q psy18077        254 HSKVKPFVCE  263 (451)
Q Consensus       254 h~~~~~~~C~  263 (451)
                      |.++++|.|.
T Consensus        93 H~~~~~~~~~  102 (107)
T 1wjp_A           93 HNQNNMAPTS  102 (107)
T ss_dssp             SCCCCCCCCC
T ss_pred             cCCCCCCCCC
Confidence            7777777664

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.71  E-value=5.2e-18  Score=127.41  Aligned_cols=84  Identities=32%  Similarity=0.769  Sum_probs=41.0

Q ss_pred             CCcccc--cchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccCC
Q psy18077        230 KPFKCK--VCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFAD  307 (451)
Q Consensus       230 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~  307 (451)
                      ++|.|+  .|++.|.+...|..|++.|.++++|.|.+|++.|.+...|..|++.|        .++++|.|..|++.|.+
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h--------~~~~~~~C~~C~~~f~~   74 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH--------TGEKPFACDICGRKFAR   74 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHH--------HCCCCEECTTTCCEESS
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHc--------CCCCCccCCCCCchhCC
Confidence            445554  35555555555555555554444444444444444444444444444        33444555555555555


Q ss_pred             hHHHHHHHHHhcCC
Q psy18077        308 KSNLRAHIQTHSKV  321 (451)
Q Consensus       308 ~~~l~~H~~~h~~~  321 (451)
                      ...|..|+++|+++
T Consensus        75 ~~~l~~H~~~H~~~   88 (90)
T 1a1h_A           75 SDERKRHTKIHLRQ   88 (90)
T ss_dssp             HHHHHHHHGGGGC-
T ss_pred             HHHHHHHHHHhccc
Confidence            55555555555443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.71  E-value=7.5e-18  Score=132.89  Aligned_cols=96  Identities=19%  Similarity=0.290  Sum_probs=62.7

Q ss_pred             HHHHhchhhcCCCCcCCCCCCcCeeccccccccCChHHHHHHHHH--hcCCCcee-cccCcccc--cChhhHHhcccccC
Q psy18077        273 SYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQT--HSKVKPFV-CEKCGKAF--ALKSYLYKHEDSSC  347 (451)
Q Consensus       273 ~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~L~~H~~~~~  347 (451)
                      ..|..|++.|        .++++|.|.+|++.|.....|..|+++  |.+.+++. |++|++.|  .....|..|++.+.
T Consensus         5 ~~l~~H~~~H--------~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~   76 (115)
T 2dmi_A            5 SSGKLYGSIF--------TGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED   76 (115)
T ss_dssp             CCCCCCCCCC--------CCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCC
T ss_pred             hhhhhheeee--------CCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccC
Confidence            3455666555        667778888888888888888888777  65555543 77777766  66666666664332


Q ss_pred             CCccCCCCCcccCcccccccccccccccCCChHHHHHHHHhccC
Q psy18077        348 LKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQIHRS  391 (451)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  391 (451)
                                     ...+|.|++|++.|.+...|..|+++|+.
T Consensus        77 ---------------~~~~~~C~~C~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           77 ---------------AQKVLKCMYCGHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             ---------------CCSSCBCSSSCCBCSSHHHHHHHHHHTTT
T ss_pred             ---------------CCcceECCCCCCccCCHHHHHHHHHHhCC
Confidence                           22356666666666666666666666654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.70  E-value=1e-17  Score=123.40  Aligned_cols=70  Identities=39%  Similarity=0.813  Sum_probs=28.7

Q ss_pred             cccCcCccccCCHHHHHHHHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccccccccChH
Q psy18077        204 CQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKS  273 (451)
Q Consensus       204 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  273 (451)
                      |.|..|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|+++++|.|+.|++.|.+..
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   71 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSS   71 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHH
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChH
Confidence            3444444444444444444444444444444444444444444444444443333333333333333333

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.68  E-value=1.1e-16  Score=122.65  Aligned_cols=83  Identities=30%  Similarity=0.524  Sum_probs=77.1

Q ss_pred             ccccccccc--ccccCCChHHHHHHHHhccCCCCCCCcccC--ccccccCChHHHHHHHHHcCCc--cccccccccCCCh
Q psy18077        363 TTISFQCRD--CGKHYSTSSNLARHRQIHRSPDDTKARTCP--QCGKLYVSMPAYSMHLRTHNQI--CQCPHCSKSFSRP  436 (451)
Q Consensus       363 ~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~H~~~--~~C~~C~~~f~~~  436 (451)
                      ...+|.|.+  |++.|.+...|..|+++|++   +++|.|.  .|++.|.+...|..|+++|++.  |+|++|++.|.+.
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   88 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTG---EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRS   88 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSC---CCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCC---CCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCH
Confidence            345799997  99999999999999999986   8999997  5999999999999999999865  9999999999999


Q ss_pred             hhHHHHHhhhcC
Q psy18077        437 WLLQGHIRTHTG  448 (451)
Q Consensus       437 ~~l~~H~~~h~~  448 (451)
                      ..|..|+++|+|
T Consensus        89 ~~l~~H~~~H~~  100 (100)
T 2ebt_A           89 DHLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHHCC
T ss_pred             HHHHHHHHHhCC
Confidence            999999999985

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.68  E-value=2.8e-17  Score=121.90  Aligned_cols=78  Identities=23%  Similarity=0.455  Sum_probs=75.2

Q ss_pred             cccc--ccccccCCChHHHHHHHHhccCCCCCCCcccCc--cccccCChHHHHHHHHHcCCcccccc---ccccCCChhh
Q psy18077        366 SFQC--RDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQ--CGKLYVSMPAYSMHLRTHNQICQCPH---CSKSFSRPWL  438 (451)
Q Consensus       366 ~~~C--~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~C~~---C~~~f~~~~~  438 (451)
                      ||.|  +.|++.|.+...|..|+++|++   +++|.|+.  |++.|.+...|..|+++|++ |.|..   |++.|.+...
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQ---QLPYECPHEGCDKRFSLPSRLKRHEKVHAG-YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHT---TCCEECCSTTCCCEESSHHHHHHHHHHHHS-EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCC---CCCeeCCCCCCcCccCCHHHHHHHHHHhCC-CCCCCCCCCCCccCCHHH
Confidence            5899  9999999999999999999997   89999998  99999999999999999999 99999   9999999999


Q ss_pred             HHHHHhhhc
Q psy18077        439 LQGHIRTHT  447 (451)
Q Consensus       439 l~~H~~~h~  447 (451)
                      |..|+++||
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            999999986

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=5.9e-17  Score=122.97  Aligned_cols=82  Identities=34%  Similarity=0.660  Sum_probs=39.4

Q ss_pred             CCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccCC
Q psy18077        228 GEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFAD  307 (451)
Q Consensus       228 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~  307 (451)
                      ++++|.|.+|++.|.+...|..|++.|.++++|.|.+|++.|.+...|..|++.|.+.      ..++|.|.+|++.|.+
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~------~~~~~~C~~C~~~f~~   77 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS------VGKPYICQSCGKGFSR   77 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCC------CCSSBCCSSSCCCBSS
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCC------CCCceECCCccchhCC
Confidence            3444555555555555555555555555544455554444444444444444444110      0144555555555555


Q ss_pred             hHHHHHHH
Q psy18077        308 KSNLRAHI  315 (451)
Q Consensus       308 ~~~l~~H~  315 (451)
                      ...|..|+
T Consensus        78 ~~~L~~H~   85 (95)
T 2yt9_A           78 PDHLNGHI   85 (95)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            55555554

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=6.4e-17  Score=126.41  Aligned_cols=86  Identities=30%  Similarity=0.715  Sum_probs=64.0

Q ss_pred             HhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccc
Q psy18077        225 THTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKA  304 (451)
Q Consensus       225 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~  304 (451)
                      .|.++++|.| .|++.|.+...|..|++.|.++++|.|.+|++.|.+...|..|++.|        .++++|.|.+|++.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h--------~~~~~~~C~~C~~~   74 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH--------TGIKPYECNICAKR   74 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT--------CCCCCEECSSSCCE
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHc--------CCCCCeeCCCCcch
Confidence            3567777777 77777777777777777777777777777777777777777777665        55667777777777


Q ss_pred             cCChHHHHHHHHHhc
Q psy18077        305 FADKSNLRAHIQTHS  319 (451)
Q Consensus       305 f~~~~~l~~H~~~h~  319 (451)
                      |.....|..|+++|+
T Consensus        75 f~~~~~l~~H~~~~~   89 (110)
T 2csh_A           75 FMWRDSFHRHVTSCT   89 (110)
T ss_dssp             ESCHHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHcc
Confidence            777777777777665

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.67  E-value=2.7e-17  Score=111.72  Aligned_cols=56  Identities=29%  Similarity=0.561  Sum_probs=42.0

Q ss_pred             CCCcccCccccccCChHHHHHHHHHcCCc--cccccccccCCChhhHHHHHhhhcCCC
Q psy18077        395 TKARTCPQCGKLYVSMPAYSMHLRTHNQI--CQCPHCSKSFSRPWLLQGHIRTHTGGT  450 (451)
Q Consensus       395 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~--~~C~~C~~~f~~~~~l~~H~~~h~~~~  450 (451)
                      +|||.|.+|++.|.....|..|+++|++.  |+|++|+++|.+...|..|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            57777777777777777777777777543  777777777888888888888877764

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.2e-16  Score=124.88  Aligned_cols=53  Identities=38%  Similarity=0.758  Sum_probs=39.4

Q ss_pred             CCCCcCeeccccccccCChHHHHHHHHHhcCCCceecccCcccccChhhHHhcc
Q psy18077        290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHE  343 (451)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  343 (451)
                      ++++++|.| .|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|+
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   57 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM   57 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHH
Confidence            467788888 78888888888888888888777777766666666555555554

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.66  E-value=9.9e-18  Score=125.26  Aligned_cols=81  Identities=21%  Similarity=0.413  Sum_probs=76.2

Q ss_pred             cccccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHcCCc-cccccccccCCChhhHHHHH
Q psy18077        365 ISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI-CQCPHCSKSFSRPWLLQGHI  443 (451)
Q Consensus       365 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~-~~C~~C~~~f~~~~~l~~H~  443 (451)
                      .+|.|++|++.|.+...|..|+++|++   ++||.|..|++.|.+...|..|+++|++. |.|..|++.|.+...|..|+
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~---~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTG---EKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC---CCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCC---CCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHH
Confidence            379999999999999999999999997   89999999999999999999999999865 99999999999999999999


Q ss_pred             hhhcC
Q psy18077        444 RTHTG  448 (451)
Q Consensus       444 ~~h~~  448 (451)
                      +.+++
T Consensus        79 ~~~h~   83 (88)
T 1llm_C           79 ARLKK   83 (88)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.66  E-value=1e-16  Score=108.87  Aligned_cols=57  Identities=35%  Similarity=0.669  Sum_probs=52.0

Q ss_pred             CcCeeccccccccCChHHHHHHHHHhcCCCceecccCcccccChhhHHhcccccCCC
Q psy18077        293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLK  349 (451)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~  349 (451)
                      |+||.|.+|++.|...+.|..|+++|++++||.|++|++.|...+.|.+|++.|.|+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            689999999999999999999999999999999999999999999999999887665

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.64  E-value=1.5e-16  Score=119.14  Aligned_cols=80  Identities=33%  Similarity=0.627  Sum_probs=74.9

Q ss_pred             ccccccc--ccccCCChHHHHHHHHhccCCCCCCCcccC--ccccccCChHHHHHHHHHcCCc--cccccccccCCChhh
Q psy18077        365 ISFQCRD--CGKHYSTSSNLARHRQIHRSPDDTKARTCP--QCGKLYVSMPAYSMHLRTHNQI--CQCPHCSKSFSRPWL  438 (451)
Q Consensus       365 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~H~~~--~~C~~C~~~f~~~~~  438 (451)
                      .+|.|++  |++.|.+...|..|+++|++   +++|.|+  .|++.|.+...|..|+++|++.  |.|++|++.|.+...
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   80 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTG---EKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDH   80 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCS---SCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCC---CCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHH
Confidence            3699999  99999999999999999986   8999997  5999999999999999999754  999999999999999


Q ss_pred             HHHHHhhhc
Q psy18077        439 LQGHIRTHT  447 (451)
Q Consensus       439 l~~H~~~h~  447 (451)
                      |..|+++|.
T Consensus        81 l~~H~~~H~   89 (89)
T 2wbs_A           81 LALHMKRHF   89 (89)
T ss_dssp             HHHHGGGGC
T ss_pred             HHHHHHhhC
Confidence            999999984

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.62  E-value=7.7e-17  Score=129.83  Aligned_cols=81  Identities=20%  Similarity=0.250  Sum_probs=68.8

Q ss_pred             ccccccccccC------CChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHcCCccccccccccCCChhhH
Q psy18077        366 SFQCRDCGKHY------STSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLL  439 (451)
Q Consensus       366 ~~~C~~C~~~f------~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l  439 (451)
                      .+.|++|.+.|      .....|..|+ .|++   ++||.|.+|++.|.....|..|+++|.++|.|++|++.|.+...|
T Consensus        41 ~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~---~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l  116 (129)
T 2wbt_A           41 RLIRAIVKTLIHNPQLLDESSYLYRLL-ASKA---ISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSA  116 (129)
T ss_dssp             HHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHH---HCSEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHH
T ss_pred             cccchhhhcccCCCcccCCHHHHHHHH-HhCC---CCCeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHH
Confidence            45555555444      4667777777 5775   899999999999999999999999997789999999999999999


Q ss_pred             HHHHhhhcCCC
Q psy18077        440 QGHIRTHTGGT  450 (451)
Q Consensus       440 ~~H~~~h~~~~  450 (451)
                      ..|+++|+|.-
T Consensus       117 ~~H~~~h~~~~  127 (129)
T 2wbt_A          117 LDHVCKKHNIC  127 (129)
T ss_dssp             HHHHHHTTCCC
T ss_pred             HHHHHHHCCcc
Confidence            99999999863

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.61  E-value=4.5e-17  Score=121.66  Aligned_cols=83  Identities=28%  Similarity=0.568  Sum_probs=65.6

Q ss_pred             CcCeeccccccccCChHHHHHHHHHhcCCCceecccCcccccChhhHHhcccccCCCccCCCCCcccCcccccccccccc
Q psy18077        293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDC  372 (451)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C  372 (451)
                      ++||.|.+|++.|.....|..|+++|++++||.|+.|++.|.....|..|++.++                ..+|.|..|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~----------------~~~~~c~~C   64 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH----------------ILPILEDKV   64 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT----------------HHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC----------------CCcchHHHH
Confidence            4688899999999999999999988988888888888888888888888875432                235777777


Q ss_pred             cccCCChHHHHHHHHhccC
Q psy18077        373 GKHYSTSSNLARHRQIHRS  391 (451)
Q Consensus       373 ~~~f~~~~~L~~H~~~H~~  391 (451)
                      ++.|.+...|..|++.+++
T Consensus        65 ~~~f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           65 EELLSKNYHLENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhHHHHHHHHH
Confidence            7777777777777776654

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.61  E-value=1e-15  Score=114.51  Aligned_cols=82  Identities=32%  Similarity=0.665  Sum_probs=65.5

Q ss_pred             CCCeeccc--ccccccChHHHHhchhhcCCCCcCCCCCCcCeecc--ccccccCChHHHHHHHHHhcCCCceecccCccc
Q psy18077        257 VKPFVCEK--CGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCK--VCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKA  332 (451)
Q Consensus       257 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  332 (451)
                      ..+|.|.+  |++.|.+...|..|++.|        .++++|.|+  .|++.|.....|..|+++|+++++|.|+.|++.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h--------~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   74 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTH--------TGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRA   74 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTS--------CSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCE
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhc--------CCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcc
Confidence            35677777  777777777777777666        566788886  588888888888888888888888888888888


Q ss_pred             ccChhhHHhccccc
Q psy18077        333 FALKSYLYKHEDSS  346 (451)
Q Consensus       333 f~~~~~L~~H~~~~  346 (451)
                      |.+...|..|++.|
T Consensus        75 f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           75 FSRSDHLALHMKRH   88 (89)
T ss_dssp             ESSHHHHHHHGGGG
T ss_pred             cCCHHHHHHHHHhh
Confidence            88888888887643

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.61  E-value=1.2e-15  Score=116.81  Aligned_cols=81  Identities=33%  Similarity=0.749  Sum_probs=37.4

Q ss_pred             Cccccc--chhhcCChHhHHHHHHHcCCCCCeecc--cccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccC
Q psy18077        231 PFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCE--KCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFA  306 (451)
Q Consensus       231 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~  306 (451)
                      +|.|.+  |++.|.+...|..|++.|.++++|.|.  .|++.|.....|..|++.|        .++++|.|.+|++.|.
T Consensus        15 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h--------~~~~~~~C~~C~~~f~   86 (100)
T 2ebt_A           15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH--------TGAKPFQCGVCNRSFS   86 (100)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHH--------TSCCSCBCSSSCCBCS
T ss_pred             ceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHh--------CCCCCeECCCCcCccC
Confidence            344443  444444444444444444444444443  2444444444444444443        3334444444444444


Q ss_pred             ChHHHHHHHHHhc
Q psy18077        307 DKSNLRAHIQTHS  319 (451)
Q Consensus       307 ~~~~l~~H~~~h~  319 (451)
                      ....|..|+++|+
T Consensus        87 ~~~~l~~H~~~H~   99 (100)
T 2ebt_A           87 RSDHLALHMKRHQ   99 (100)
T ss_dssp             SHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHhC
Confidence            4444444444443

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=9.9e-16  Score=116.68  Aligned_cols=74  Identities=15%  Similarity=0.311  Sum_probs=67.8

Q ss_pred             cCCChHHHHHHHHhccCCCCCCCcccCccccccC-ChHHHHHHHHHcCC---ccccccccccCCChhhHHHHHhhhcCCC
Q psy18077        375 HYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYV-SMPAYSMHLRTHNQ---ICQCPHCSKSFSRPWLLQGHIRTHTGGT  450 (451)
Q Consensus       375 ~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~-~~~~l~~H~~~H~~---~~~C~~C~~~f~~~~~l~~H~~~h~~~~  450 (451)
                      .+.....+..|+++|.+   +++|.|.+|++.|. ....|..|+++|++   +|+|.+|++.|.+...|..|+++|++++
T Consensus         5 s~~~~~~~~~h~~~h~~---~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~k   81 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHE---RGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAK   81 (98)
T ss_dssp             CCCCCCSCSHHHHTTTT---TSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSC
T ss_pred             CCCCCCcHHHHHHHhcc---CCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCC
Confidence            45566778899999986   89999999999999 99999999999986   4999999999999999999999999988


Q ss_pred             C
Q psy18077        451 N  451 (451)
Q Consensus       451 ~  451 (451)
                      |
T Consensus        82 p   82 (98)
T 2gqj_A           82 P   82 (98)
T ss_dssp             S
T ss_pred             C
Confidence            6

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.56  E-value=2.8e-15  Score=111.00  Aligned_cols=78  Identities=28%  Similarity=0.570  Sum_probs=56.0

Q ss_pred             Ceec--cccccccCChHHHHHHHHHhcCCCceeccc--CcccccChhhHHhcccccCCCccCCCCCcccCcccccccccc
Q psy18077        295 PFKC--KVCDKAFADKSNLRAHIQTHSKVKPFVCEK--CGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCR  370 (451)
Q Consensus       295 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~C~  370 (451)
                      ||.|  +.|++.|.....|..|+++|+++++|.|+.  |++.|.+...|.+|++.+.+                  |.|.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~------------------~~C~   62 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG------------------YPCK   62 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS------------------EECC
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC------------------CCCC
Confidence            5778  778888888888888888888888888776  77777777777777643311                  5666


Q ss_pred             c---ccccCCChHHHHHHHHhcc
Q psy18077        371 D---CGKHYSTSSNLARHRQIHR  390 (451)
Q Consensus       371 ~---C~~~f~~~~~L~~H~~~H~  390 (451)
                      .   |++.|.+...|..|+++|+
T Consensus        63 ~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           63 KDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             SCSSCCCEESSHHHHHHHHHHCC
T ss_pred             CCCCCCCccCCHHHHHHHHHhcC
Confidence            6   6666666666666666654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=4.3e-15  Score=108.31  Aligned_cols=72  Identities=31%  Similarity=0.690  Sum_probs=61.2

Q ss_pred             CCCCCeeccc--ccccccChHHHHhchh-hcCCCCcCCCCCCcCeeccc--cccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        255 SKVKPFVCEK--CGKAFALKSYLYKHED-SSCLKSYDSSSSEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       255 ~~~~~~~C~~--C~~~f~~~~~l~~H~~-~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|..  |++.|.+...|..|++ .|        .++++|.|.+  |++.|.....|..|+++|++++||.|++|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H--------~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   74 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH--------IHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS   74 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGG--------GSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSS
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHh--------CCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCC
Confidence            4567788876  8888888888888887 45        5678899998  99999999999999999999999999999


Q ss_pred             ccccc
Q psy18077        330 GKAFA  334 (451)
Q Consensus       330 ~~~f~  334 (451)
                      ++.|.
T Consensus        75 ~k~F~   79 (79)
T 2dlk_A           75 GPSSG   79 (79)
T ss_dssp             SCCCC
T ss_pred             CCCCC
Confidence            99884

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=2.6e-15  Score=111.42  Aligned_cols=83  Identities=23%  Similarity=0.385  Sum_probs=63.3

Q ss_pred             HHHHHHHcCCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccCChHHHHHHHHHhcCCCceec
Q psy18077        247 LRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC  326 (451)
Q Consensus       247 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  326 (451)
                      |..|+++|.++++|.|.+|++.|.....|..|++.++...    ..+++|.|.+|++.|.....|..|+++|++++++.|
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~----~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~   78 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN----FVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEG   78 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS----CCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCc----CCCcceECCCCCChhCCHHHHHHHHHHccCCCCccc
Confidence            4456667777777777777777777777777776553221    123789999999999999999999999999999999


Q ss_pred             ccCcccc
Q psy18077        327 EKCGKAF  333 (451)
Q Consensus       327 ~~C~~~f  333 (451)
                      ..|+..|
T Consensus        79 ~~~~~~~   85 (86)
T 1x6h_A           79 ENSGPSS   85 (86)
T ss_dssp             CCCCCCC
T ss_pred             CCCCCCC
Confidence            9998765

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=8e-15  Score=108.77  Aligned_cols=79  Identities=33%  Similarity=0.609  Sum_probs=56.9

Q ss_pred             HHHHHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCC----CCeecccccccccChHHHHhchhhcCCCCcCCCCCCc
Q psy18077        219 LQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKV----KPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEK  294 (451)
Q Consensus       219 L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~  294 (451)
                      |..|+++|.++++|.|.+|++.|.+...|..|++.|+..    ++|.|.+|++.|.....|..|++.|        .+++
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h--------~~~~   74 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNC--------AGPD   74 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHC--------CCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHc--------cCCC
Confidence            445677777777777777777777777777777766654    5677777777777777777777766        5667


Q ss_pred             Ceecccccccc
Q psy18077        295 PFKCKVCDKAF  305 (451)
Q Consensus       295 ~~~C~~C~~~f  305 (451)
                      ++.|..|+..|
T Consensus        75 ~~~~~~~~~~~   85 (86)
T 1x6h_A           75 GVEGENSGPSS   85 (86)
T ss_dssp             SCCCCCCCCCC
T ss_pred             CcccCCCCCCC
Confidence            77777777654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=3.8e-14  Score=103.21  Aligned_cols=61  Identities=33%  Similarity=0.695  Sum_probs=42.1

Q ss_pred             CccccCCHHHHHHHHH-HhcCCCCccccc--chhhcCChHhHHHHHHHcCCCCCeecccccccc
Q psy18077        209 CSKSFSRPWLLQGHIR-THTGEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAF  269 (451)
Q Consensus       209 C~~~f~~~~~L~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  269 (451)
                      |++.|.+...|..|++ .|.++++|.|.+  |++.|.+...|..|+++|++++||.|.+|++.|
T Consensus        15 C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A           15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             TCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            6666666666666666 566666777766  777777777777777777767777777776666

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.46  E-value=6.4e-14  Score=100.55  Aligned_cols=57  Identities=26%  Similarity=0.511  Sum_probs=36.6

Q ss_pred             CCCcccCccccccCChHHHHHHHHHcCCc--cccccccccCCChhhHHHHHhhhcCCCC
Q psy18077        395 TKARTCPQCGKLYVSMPAYSMHLRTHNQI--CQCPHCSKSFSRPWLLQGHIRTHTGGTN  451 (451)
Q Consensus       395 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~--~~C~~C~~~f~~~~~l~~H~~~h~~~~~  451 (451)
                      +++|.|..|++.|.+...|..|+++|++.  |+|.+|++.|.+...|..|+++|+|++|
T Consensus        15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             CCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            55666666666666666666666666533  6666666666666666666666666665

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=4.8e-14  Score=102.12  Aligned_cols=64  Identities=36%  Similarity=0.724  Sum_probs=39.8

Q ss_pred             CCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccCChHHHHHHHHHhcCCCceec
Q psy18077        255 SKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC  326 (451)
Q Consensus       255 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  326 (451)
                      .++++|.|.+|++.|.....|..|++.|        .++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h--------~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRTH--------TGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTT--------CCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHc--------CCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3455566666666666666666665554        445666666666666666666666666666666665

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=5.3e-14  Score=99.79  Aligned_cols=57  Identities=25%  Similarity=0.441  Sum_probs=38.6

Q ss_pred             CCCcccCccccccCChHHHHHHHHHcCCc--cccccccccCCChhhHHHHHhhhcCCCC
Q psy18077        395 TKARTCPQCGKLYVSMPAYSMHLRTHNQI--CQCPHCSKSFSRPWLLQGHIRTHTGGTN  451 (451)
Q Consensus       395 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~--~~C~~C~~~f~~~~~l~~H~~~h~~~~~  451 (451)
                      +++|.|.+|++.|.+...|..|+++|++.  |+|++|++.|.+...|..|+++|++++|
T Consensus         7 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            7 GHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            56666666666666666666666666543  6677777777777777777777776654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=7.8e-14  Score=105.27  Aligned_cols=73  Identities=16%  Similarity=0.292  Sum_probs=66.0

Q ss_pred             ccCCChHHHHHHHHhccCCCCCCCcccCcccccc-CChHHHHHHHHHcCCc--cccccccccCCChhhHHHH-HhhhcCC
Q psy18077        374 KHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLY-VSMPAYSMHLRTHNQI--CQCPHCSKSFSRPWLLQGH-IRTHTGG  449 (451)
Q Consensus       374 ~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f-~~~~~l~~H~~~H~~~--~~C~~C~~~f~~~~~l~~H-~~~h~~~  449 (451)
                      ..|.....|..|++.|.+   +++|.|..|++.| .+...|..|+++| +.  |.|.+|++.|.+...|..| +++|+++
T Consensus        14 ~~~~~~~~~~~~~~~~~~---~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVD---KGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHH---TSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCCchHHHHHHHHhcC---CCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            467888899999999986   8999999999999 9999999999999 54  9999999999999999999 8899865


Q ss_pred             C
Q psy18077        450 T  450 (451)
Q Consensus       450 ~  450 (451)
                      .
T Consensus        90 p   90 (96)
T 2ctd_A           90 P   90 (96)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=3.1e-14  Score=101.58  Aligned_cols=56  Identities=34%  Similarity=0.592  Sum_probs=35.6

Q ss_pred             CCCcccCccccccCChHHHHHHHHHcCC--ccccccccccCCChhhHHHHHhhhcCCC
Q psy18077        395 TKARTCPQCGKLYVSMPAYSMHLRTHNQ--ICQCPHCSKSFSRPWLLQGHIRTHTGGT  450 (451)
Q Consensus       395 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~--~~~C~~C~~~f~~~~~l~~H~~~h~~~~  450 (451)
                      +++|.|.+|++.|.....|..|+++|++  +|+|++|++.|.+...|..|+++|+++.
T Consensus        12 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           12 EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            5666666666666666666666666643  3666666666666666666666666553

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=2.3e-14  Score=103.78  Aligned_cols=65  Identities=23%  Similarity=0.440  Sum_probs=52.5

Q ss_pred             HHHHHHhccCCCCCCCcccCccccccCChHHHHHHHH-HcCC---ccccccccccCCChhhHHHHHhhhcCC
Q psy18077        382 LARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLR-THNQ---ICQCPHCSKSFSRPWLLQGHIRTHTGG  449 (451)
Q Consensus       382 L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~H~~---~~~C~~C~~~f~~~~~l~~H~~~h~~~  449 (451)
                      |.+|+++|.+   ++||.|.+|++.|.+...|..|++ .|.+   +|+|++|++.|.+...|..|+++||+.
T Consensus         3 ~~~H~~~H~~---~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGRTHSG---EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCSC---CCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCccccccCC---CCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            4457788876   788888888888888888888887 5653   488888888888888888888886654

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=2.7e-14  Score=108.66  Aligned_cols=76  Identities=21%  Similarity=0.309  Sum_probs=47.3

Q ss_pred             CChHhHHHHHHHcCCCCCeeccccccccc-ChHHHHhchhhcCCCCcCCCCC-CcCeeccccccccCChHHHHHHHHHhc
Q psy18077        242 ADKSNLRAHIQTHSKVKPFVCEKCGKAFA-LKSYLYKHEDSSCLKSYDSSSS-EKPFKCKVCDKAFADKSNLRAHIQTHS  319 (451)
Q Consensus       242 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~~~~~~~~~~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~  319 (451)
                      .....+..|++.|.++++|.|.+|++.|. ....|..|++.|        .+ +++|.|.+|++.|.....|..|+++|+
T Consensus         7 ~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h--------~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~   78 (98)
T 2gqj_A            7 GPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVC--------QKLQDALKCQHCRKQFKSKAGLNYHTMAEH   78 (98)
T ss_dssp             CCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHH--------HHHHHHHSCSSSCCCCSCHHHHHHHHHHHS
T ss_pred             CCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHH--------cCCCCCEECCCCCCccCCHHHHHHHHHHHc
Confidence            33344555666666666666666666666 666666666555        33 456777777777777777777777777


Q ss_pred             CCCcee
Q psy18077        320 KVKPFV  325 (451)
Q Consensus       320 ~~~~~~  325 (451)
                      +++|+.
T Consensus        79 ~~kp~~   84 (98)
T 2gqj_A           79 SAKPSD   84 (98)
T ss_dssp             CSCSSC
T ss_pred             CCCCCC
Confidence            766644

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=1.1e-13  Score=104.87  Aligned_cols=72  Identities=15%  Similarity=0.194  Sum_probs=54.1

Q ss_pred             CCCCCeecccccccccChHHHHhchhh-cCCCCcCCCCCCcCeeccccccccCChHHHHHH-HHHhcCCCceecccCcc
Q psy18077        255 SKVKPFVCEKCGKAFALKSYLYKHEDS-SCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAH-IQTHSKVKPFVCEKCGK  331 (451)
Q Consensus       255 ~~~~~~~C~~C~~~f~~~~~l~~H~~~-~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~  331 (451)
                      .|++||.|..|++.|.....|..|++. |.+     ..+++||.|.+|++.|.....|..| +++|++++||.|.++..
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~-----~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPN-----VVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSS-----CCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCC-----CCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            466777777777777777777777753 411     0346788899999999999999999 78899999999987543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.41  E-value=2.4e-13  Score=97.53  Aligned_cols=60  Identities=35%  Similarity=0.843  Sum_probs=27.1

Q ss_pred             CCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccCChHHHHHHHHHhcCCCce
Q psy18077        257 VKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPF  324 (451)
Q Consensus       257 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  324 (451)
                      +++|.|..|++.|.+...|..|++.|        .++++|.|.+|++.|.....|..|+++|++++||
T Consensus        15 ~~~~~C~~C~k~f~~~~~l~~H~~~H--------~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           15 DKPYKCDRCQASFRYKGNLASHKTVH--------TGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCSBCCTTSSCCBSCHHHHHHHHHHH--------CCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCeECCCCCceeCCHHHHHHHHHHc--------CCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            33444444444444444444444333        3334444444555555555555555555554443

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=1.9e-13  Score=98.84  Aligned_cols=56  Identities=38%  Similarity=0.784  Sum_probs=30.8

Q ss_pred             cCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchhhc
Q psy18077        227 TGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSS  282 (451)
Q Consensus       227 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  282 (451)
                      .++++|.|.+|++.|.+...|..|++.|.++++|.|.+|++.|.....|..|++.|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H   69 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH   69 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGS
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHh
Confidence            34455555555555555555555555555555555555555555555555555544

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.40  E-value=7.2e-14  Score=112.30  Aligned_cols=121  Identities=16%  Similarity=0.243  Sum_probs=74.5

Q ss_pred             cCCCCccccccccccccCChHhHHHHHhhhcCCCCCCCcccccccccccCHHHHHHHHHHcCCCcccCcCccccCCHHHH
Q psy18077        140 NNNNNESFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSFSRPWLL  219 (451)
Q Consensus       140 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~C~~C~~~f~~~~~L  219 (451)
                      .+.+.++|.|...+....  ..+..+.+.+......+.+.|++|.+.|..                    ...|.....|
T Consensus         6 ~~~~~k~~~~~~k~~~~~--~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~--------------------~~~~~~~~~l   63 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIH--VTLEELKRYHQLTPEQKRLIRAIVKTLIHN--------------------PQLLDESSYL   63 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEE--CCHHHHHHHTTSCHHHHHHHHHHHHHHHHC--------------------GGGTTTHHHH
T ss_pred             hcccccccccccCCeeee--ecHHhhhccccCChhhCcccchhhhcccCC--------------------CcccCCHHHH
Confidence            345677787766543322  123334333321112345667776655542                    2334455666


Q ss_pred             HHHHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchhhcCCC
Q psy18077        220 QGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLK  285 (451)
Q Consensus       220 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  285 (451)
                      ..|+ .|+++++|.|.+|++.|.....|..|++.|  ++||.|.+|++.|.....|..|++.|++.
T Consensus        64 ~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           64 YRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             HHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            6666 466777777777777777777777777777  67777777777777777777777776543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.40  E-value=2.3e-13  Score=92.10  Aligned_cols=53  Identities=26%  Similarity=0.498  Sum_probs=35.8

Q ss_pred             ccccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHcC
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHN  421 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~  421 (451)
                      +|.|++|++.|.+...|..|+++|++   ++||.|+.|++.|.....|..|+++|+
T Consensus         4 ~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            4 SRECSYCGKFFRSNYYLNIHLRTHTG---EKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             -CBCTTTCCBCSCHHHHHHHHHHHHC---CCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CccCCCCcchhCChHHHHHHHHHcCC---CCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            56677777777777777777777665   666777777766666666666666665

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=2.3e-13  Score=103.23  Aligned_cols=65  Identities=23%  Similarity=0.379  Sum_probs=32.6

Q ss_pred             CCCCcccccchhhcCChHhHHHHHH-Hc---CCCCCeecccccccccChHHHHhc-hhhcCCCCcCCCCCCcCeeccc
Q psy18077        228 GEKPFKCKVCDKAFADKSNLRAHIQ-TH---SKVKPFVCEKCGKAFALKSYLYKH-EDSSCLKSYDSSSSEKPFKCKV  300 (451)
Q Consensus       228 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~~~~~~~~~~~~~~C~~  300 (451)
                      |++||.|..|++.|.....|..|++ .|   .+++||.|.+|++.|.....|..| ++.|        ++++||.|.+
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~H--------tgekpy~C~~   84 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYH--------PGEENFKLTM   84 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTS--------TTCCCEEEEE
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhc--------CCCCCeeCCc
Confidence            4445555555555555555555554 24   334455555555555555555555 4444        4445555554

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.40  E-value=3e-13  Score=91.56  Aligned_cols=52  Identities=19%  Similarity=0.542  Sum_probs=26.3

Q ss_pred             cccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHcC
Q psy18077        367 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHN  421 (451)
Q Consensus       367 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~  421 (451)
                      |.|++|++.|.+...|..|+++|++   +++|.|+.|++.|.+...|..|+++|+
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~   53 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHTD---VRPYHCTYCNFSFKTKGNLTKHMKSKA   53 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSS---CCCEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcCC---CCCccCCCCCchhcCHHHHHHHHHHhc
Confidence            4555555555555555555555543   445555555444444444444444443

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.39  E-value=1.9e-13  Score=92.51  Aligned_cols=54  Identities=30%  Similarity=0.580  Sum_probs=48.1

Q ss_pred             CCCcccCccccccCChHHHHHHHHHcCC--ccccccccccCCChhhHHHHHhhhcC
Q psy18077        395 TKARTCPQCGKLYVSMPAYSMHLRTHNQ--ICQCPHCSKSFSRPWLLQGHIRTHTG  448 (451)
Q Consensus       395 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~--~~~C~~C~~~f~~~~~l~~H~~~h~~  448 (451)
                      +++|.|..|++.|.+...|..|+++|++  +|+|++|++.|.+...|..|+++||+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            6899999999999999999999999965  49999999999999999999999985

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.38  E-value=4.8e-13  Score=90.52  Aligned_cols=55  Identities=24%  Similarity=0.498  Sum_probs=52.0

Q ss_pred             CcccCccccccCChHHHHHHHHHcCCc--cccccccccCCChhhHHHHHhhhcCCCC
Q psy18077        397 ARTCPQCGKLYVSMPAYSMHLRTHNQI--CQCPHCSKSFSRPWLLQGHIRTHTGGTN  451 (451)
Q Consensus       397 ~~~C~~C~~~f~~~~~l~~H~~~H~~~--~~C~~C~~~f~~~~~l~~H~~~h~~~~~  451 (451)
                      ||.|..|++.|.+...|..|+++|++.  |.|++|++.|.+...|..|+++|++++.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kk   57 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK   57 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccCC
Confidence            699999999999999999999999864  9999999999999999999999999873

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=3.2e-13  Score=101.87  Aligned_cols=61  Identities=20%  Similarity=0.356  Sum_probs=26.0

Q ss_pred             HHHHHHHHHhcCCCCcccccchhhc-CChHhHHHHHHHcCCCCCeecccccccccChHHHHhc
Q psy18077        217 WLLQGHIRTHTGEKPFKCKVCDKAF-ADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH  278 (451)
Q Consensus       217 ~~L~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  278 (451)
                      ..|..|++.|.++++|.|..|++.| .+...|..|++.| ++++|.|.+|++.|.....|..|
T Consensus        20 ~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H   81 (96)
T 2ctd_A           20 SLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYH   81 (96)
T ss_dssp             CHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHH
T ss_pred             hHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHH
Confidence            3344444444444444444444444 4444444444444 44444444333333333333333

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.37  E-value=6.2e-13  Score=97.13  Aligned_cols=56  Identities=27%  Similarity=0.481  Sum_probs=52.0

Q ss_pred             CCCCCcCeeccccccccCChHHHHHHHHHhcCCCceecccCcccccChhhHHhccc
Q psy18077        289 SSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHED  344 (451)
Q Consensus       289 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  344 (451)
                      .....++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|.+|++
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   77 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHIN   77 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHH
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCc
Confidence            34677889999999999999999999999999999999999999999999999975

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=7.8e-13  Score=93.64  Aligned_cols=57  Identities=33%  Similarity=0.515  Sum_probs=26.9

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccCcccccChhhHHhcccccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSC  347 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~~  347 (451)
                      .++++|.|.+|++.|.....|..|+++|+++++|.|++|++.|.....|.+|++.+.
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   61 (70)
T 1x5w_A            5 SSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH   61 (70)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHh
Confidence            334444444444444444444444444444444444444444444444444444443

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.36  E-value=9.2e-13  Score=96.21  Aligned_cols=55  Identities=20%  Similarity=0.513  Sum_probs=44.6

Q ss_pred             cccccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHH-HcCC
Q psy18077        365 ISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLR-THNQ  422 (451)
Q Consensus       365 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~H~~  422 (451)
                      .+|.|++|++.|.+...|.+|+++|++   ++||.|.+|++.|.+...|..|++ .|.+
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~---~k~~~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHLRLLHA---AQVFPCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHHHTTSC---SSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             CCEECCCCCCCcCcHHHHhhhhhhccC---CCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence            368888888888888888888888886   788888888888888888888864 4544

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=4.2e-13  Score=93.86  Aligned_cols=54  Identities=24%  Similarity=0.628  Sum_probs=30.4

Q ss_pred             CCCcccCccccccCChHHHHHHHHH-c-C--CccccccccccCCChhhHHHHHhhhcC
Q psy18077        395 TKARTCPQCGKLYVSMPAYSMHLRT-H-N--QICQCPHCSKSFSRPWLLQGHIRTHTG  448 (451)
Q Consensus       395 ~~~~~C~~C~~~f~~~~~l~~H~~~-H-~--~~~~C~~C~~~f~~~~~l~~H~~~h~~  448 (451)
                      ++||.|+.|++.|.+...|..|+++ | .  ++|+|++|++.|.+...|..|+++|||
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            5555555555555555555555555 4 1  225566666666666666666655554

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=5.5e-13  Score=96.42  Aligned_cols=58  Identities=31%  Similarity=0.606  Sum_probs=38.1

Q ss_pred             CCCcCeeccccccccCChHHHHHHHH-HhcCC-CceecccCcccccChhhHHhcccccCC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQ-THSKV-KPFVCEKCGKAFALKSYLYKHEDSSCL  348 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~L~~H~~~~~~  348 (451)
                      .++++|.|.+|++.|.....|..|++ .|.+. ++|.|++|++.|.....|..|++.+++
T Consensus        11 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A           11 SGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             SCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            56666777777777777777777765 45543 667777777777777777777665443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=9e-13  Score=93.89  Aligned_cols=58  Identities=41%  Similarity=0.721  Sum_probs=36.4

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccCcccccChhhHHhcccccCC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCL  348 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~  348 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|++.|.....|.+|++.+.+
T Consensus        10 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   67 (72)
T 1x6e_A           10 SGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS   67 (72)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred             CCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence            5556666666666666666666666666666666666666666666666666655443

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=4.1e-15  Score=106.59  Aligned_cols=71  Identities=18%  Similarity=0.285  Sum_probs=57.5

Q ss_pred             hHHHHHHHHHhcCCCceecccCcccccChhhHHhcccccCCCccCCCCCcccCcccccccccccccccCCChHHHHHHHH
Q psy18077        308 KSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSNLARHRQ  387 (451)
Q Consensus       308 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~  387 (451)
                      ...|..|+++|.+++||.|++|++.|.....|..                      ..+|.|++|++.|.+...|..|++
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~----------------------~~~~~C~~C~~~f~~~~~l~~H~~   60 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR----------------------RKTPMCEKCRKDSCQEAALNKDEG   60 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC----------------------SSSCCCHHHHHTCSCCCSSCCCSS
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc----------------------CCCCCCCCCChhhcCHHHHHHHHH
Confidence            3456678888888888889888888887766544                      336889999999999999999998


Q ss_pred             hccCCCCCCCcccCcc
Q psy18077        388 IHRSPDDTKARTCPQC  403 (451)
Q Consensus       388 ~H~~~~~~~~~~C~~C  403 (451)
                      +|++   +++|.|++|
T Consensus        61 ~H~~---~~~~~C~~C   73 (73)
T 2ctu_A           61 NESG---KKTSGPSSG   73 (73)
T ss_dssp             CCCC---CCCSSCCCC
T ss_pred             hhcC---CCCCCCCCC
Confidence            8886   788999887

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=3.1e-15  Score=107.22  Aligned_cols=71  Identities=21%  Similarity=0.263  Sum_probs=53.2

Q ss_pred             hHhHHHHHHHcCCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccCChHHHHHHHHHhcCCCc
Q psy18077        244 KSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKP  323 (451)
Q Consensus       244 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  323 (451)
                      ...|..|++.|.++++|.|.+|++.|.+...|..               +++|.|..|++.|.....|..|+++|++++|
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~---------------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~   67 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR---------------RKTPMCEKCRKDSCQEAALNKDEGNESGKKT   67 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC---------------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc---------------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCC
Confidence            3456667777777777777777777777665543               4678888888888888888888888888888


Q ss_pred             eecccC
Q psy18077        324 FVCEKC  329 (451)
Q Consensus       324 ~~C~~C  329 (451)
                      |.|++|
T Consensus        68 ~~C~~C   73 (73)
T 2ctu_A           68 SGPSSG   73 (73)
T ss_dssp             SSCCCC
T ss_pred             CCCCCC
Confidence            888776

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=2.1e-12  Score=88.27  Aligned_cols=53  Identities=25%  Similarity=0.570  Sum_probs=32.5

Q ss_pred             ccccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHH-HHcC
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHL-RTHN  421 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~H~  421 (451)
                      +|.|++|++.|.+...|..|+++|++   +++|.|+.|++.|.+...|..|+ ++|.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN---EKPYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTS---SCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCC---CCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence            46666666666666666666666654   55666666666666666666664 3444

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=2.3e-12  Score=88.08  Aligned_cols=55  Identities=25%  Similarity=0.582  Sum_probs=50.6

Q ss_pred             CCcccCccccccCChHHHHHHHHHcCCc--cccccccccCCChhhHHHHH-hhhcCCC
Q psy18077        396 KARTCPQCGKLYVSMPAYSMHLRTHNQI--CQCPHCSKSFSRPWLLQGHI-RTHTGGT  450 (451)
Q Consensus       396 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~--~~C~~C~~~f~~~~~l~~H~-~~h~~~~  450 (451)
                      +||.|..|++.|.+...|..|+++|++.  |.|++|++.|.+...|..|+ ++|.++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            5899999999999999999999999764  99999999999999999997 6788764

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=2.7e-12  Score=93.00  Aligned_cols=50  Identities=24%  Similarity=0.478  Sum_probs=28.4

Q ss_pred             CCCcccCccccccCChHHHHHHHHHcC-----CccccccccccCCChhhHHHHHh
Q psy18077        395 TKARTCPQCGKLYVSMPAYSMHLRTHN-----QICQCPHCSKSFSRPWLLQGHIR  444 (451)
Q Consensus       395 ~~~~~C~~C~~~f~~~~~l~~H~~~H~-----~~~~C~~C~~~f~~~~~l~~H~~  444 (451)
                      +++|.|.+|++.|.....|..|+++|+     ++|.|.+|++.|.+...|..|++
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~   59 (78)
T 2d9h_A            5 SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRS   59 (78)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHH
T ss_pred             CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHH
Confidence            555555555555555555555555553     23555556666655556666653

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=3.3e-12  Score=89.17  Aligned_cols=59  Identities=25%  Similarity=0.589  Sum_probs=52.4

Q ss_pred             cccccccccccccCCChHHHHHHHHh-ccCCCCCCCcccCccccccCChHHHHHHHHHcCCc
Q psy18077        363 TTISFQCRDCGKHYSTSSNLARHRQI-HRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI  423 (451)
Q Consensus       363 ~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~  423 (451)
                      +..+|.|+.|++.|.+...|..|+++ |..  ++++|.|+.|++.|.+...|..|+++|++.
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~--~~~~~~C~~C~k~f~~~~~L~~H~~~~H~i   66 (66)
T 2drp_A            7 GEHTYRCKVCSRVYTHISNFCRHYVTSHKR--NVKVYPCPFCFKEFTRKDNMTAHVKIIHKI   66 (66)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSS--SCCCEECTTTCCEESCHHHHHHHHHHHTC-
T ss_pred             CCcceECCCCcchhCCHHHHHHHHHHHcCC--CCcCeECCCCCCccCCHHHHHHHHHHHcCC
Confidence            34589999999999999999999998 522  389999999999999999999999999863

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=5.9e-12  Score=91.16  Aligned_cols=57  Identities=28%  Similarity=0.549  Sum_probs=46.6

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcC---CCceecccCcccccChhhHHhcccccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSK---VKPFVCEKCGKAFALKSYLYKHEDSSC  347 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~L~~H~~~~~  347 (451)
                      +++++|.|.+|++.|.....|..|+++|++   +++|.|++|++.|.....|.+|++.++
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   62 (78)
T 2d9h_A            3 SGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH   62 (78)
T ss_dssp             CSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTS
T ss_pred             CCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhC
Confidence            677888888888888888888888888875   788888888888888888888885433

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=6.6e-12  Score=89.60  Aligned_cols=55  Identities=29%  Similarity=0.635  Sum_probs=36.7

Q ss_pred             ccccccc--cccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHcC
Q psy18077        364 TISFQCR--DCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHN  421 (451)
Q Consensus       364 ~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~  421 (451)
                      ..+|.|+  .|++.|.+...|..|+++|.+   +++|.|.+|++.|.....|..|+++|+
T Consensus        17 ~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           17 MRPYACPVESCDRRFSRSDELTRHIRIHTG---QKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCEECSSTTBCCEESSHHHHHHHHHHHHC---CCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccCCcCCCCCCccCCHHHHHHHHHhhCC---CCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            3367775  477777777777777777665   566777777777776666766666653

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.20  E-value=1.8e-11  Score=87.27  Aligned_cols=57  Identities=30%  Similarity=0.680  Sum_probs=52.4

Q ss_pred             CCCCcCeecc--ccccccCChHHHHHHHHHhcCCCceecccCcccccChhhHHhccccc
Q psy18077        290 SSSEKPFKCK--VCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSS  346 (451)
Q Consensus       290 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~  346 (451)
                      +.++++|.|+  .|++.|.....|..|+++|.++++|.|++|++.|.....|.+|++.|
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            3678999997  59999999999999999999999999999999999999999998754

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1.3e-11  Score=86.01  Aligned_cols=58  Identities=24%  Similarity=0.498  Sum_probs=53.4

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecc-cCcccccChhhHHhcccccCCCc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE-KCGKAFALKSYLYKHEDSSCLKS  350 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~L~~H~~~~~~~~  350 (451)
                      .++++|.|..|++.|. ...|..|+++ ++++||.|+ .|++.|..++.|..|++.||...
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            5678999999999999 9999999999 999999999 99999999999999998887653

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.17  E-value=2.3e-11  Score=91.68  Aligned_cols=59  Identities=27%  Similarity=0.376  Sum_probs=36.7

Q ss_pred             ccCcCccccCCHHHHHHHHHH-hcCCCC--------cccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        205 QCPHCSKSFSRPWLLQGHIRT-HTGEKP--------FKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       205 ~C~~C~~~f~~~~~L~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      .|..|++.|.....|..|+++ |.++++        |.|.+|++.|.+...|..|+++|++++||.|.
T Consensus        27 ~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            455555555555556666555 555544        66666666666666666666666666666664

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.16  E-value=2.3e-11  Score=91.71  Aligned_cols=33  Identities=27%  Similarity=0.299  Sum_probs=30.6

Q ss_pred             eeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        296 FKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      |.|..|++.|.....|..|+++|++++||.|+.
T Consensus        63 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             TTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             cCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            889999999999999999999999999999963

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=2.4e-11  Score=84.71  Aligned_cols=50  Identities=24%  Similarity=0.454  Sum_probs=24.3

Q ss_pred             ccccccccccCCChHHHHHHHHhccCCCCCCCcccC-ccccccCChHHHHHHHHHc
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCP-QCGKLYVSMPAYSMHLRTH  420 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~-~C~~~f~~~~~l~~H~~~H  420 (451)
                      +|.|..|++.|. .+.|..|+++ .+   ++||.|+ .|++.|.....|..|+++|
T Consensus        10 ~~~C~~C~k~f~-~~~L~~H~~~-~~---~~p~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A           10 TQPCTYCTKEFV-FDTIQSHQYQ-CP---RLPVACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             EEECSSSCCEEE-HHHHHHHHHH-CS---SSEEECTTCCSCCEEETTTHHHHHHTT
T ss_pred             CeeccccCCccC-HHHHHHHHHH-cC---CcCccCCcccCcccccHHHHHHHHHhh
Confidence            455555555555 5555555544 32   4445554 4544444444444444444

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=6.6e-11  Score=78.73  Aligned_cols=47  Identities=30%  Similarity=0.614  Sum_probs=43.5

Q ss_pred             CCCCCcCeeccccccccCChHHHHHHHH-HhcCCCceecccCcccccC
Q psy18077        289 SSSSEKPFKCKVCDKAFADKSNLRAHIQ-THSKVKPFVCEKCGKAFAL  335 (451)
Q Consensus       289 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  335 (451)
                      .+.++++|.|.+|++.|.....|..|++ +|++++||.|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4478899999999999999999999997 8999999999999999975

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.9e-11  Score=75.73  Aligned_cols=39  Identities=31%  Similarity=0.560  Sum_probs=37.2

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      +++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            8 TGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.08  E-value=6.8e-11  Score=75.78  Aligned_cols=39  Identities=36%  Similarity=0.648  Sum_probs=37.1

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      +++++|.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            8 TGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7e-11  Score=75.70  Aligned_cols=39  Identities=33%  Similarity=0.506  Sum_probs=37.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            8 TGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.2e-11  Score=75.65  Aligned_cols=39  Identities=36%  Similarity=0.618  Sum_probs=37.2

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            8 TGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=8.6e-11  Score=75.28  Aligned_cols=39  Identities=36%  Similarity=0.641  Sum_probs=37.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            8 SGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=8.8e-11  Score=74.42  Aligned_cols=39  Identities=49%  Similarity=0.721  Sum_probs=37.1

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            6 SGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             SSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.5e-11  Score=75.56  Aligned_cols=39  Identities=41%  Similarity=0.706  Sum_probs=37.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            8 TGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=8.7e-11  Score=75.24  Aligned_cols=39  Identities=36%  Similarity=0.561  Sum_probs=37.1

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            8 TGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             SSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.07  E-value=1.3e-10  Score=82.56  Aligned_cols=55  Identities=35%  Similarity=0.599  Sum_probs=44.5

Q ss_pred             ccccccccc--ccccCCChHHHHHHHHhccCCCCCCCcccCc--cccccCChHHHHHHHHHc
Q psy18077        363 TTISFQCRD--CGKHYSTSSNLARHRQIHRSPDDTKARTCPQ--CGKLYVSMPAYSMHLRTH  420 (451)
Q Consensus       363 ~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~H  420 (451)
                      ...+|.|..  |++.|.....|..|+++|++   +++|.|.+  |++.|.....|..|+++|
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~---~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTG---EKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHHHHHHHHSS---SCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccCceeCCCCCCccccCCHHHHHHHHHhcCC---CCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            344788887  88888888888888888876   78888865  888888888888888765

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.07  E-value=2e-10  Score=81.53  Aligned_cols=56  Identities=36%  Similarity=0.670  Sum_probs=51.6

Q ss_pred             CCCCcCeeccc--cccccCChHHHHHHHHHhcCCCceeccc--CcccccChhhHHhcccc
Q psy18077        290 SSSEKPFKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEK--CGKAFALKSYLYKHEDS  345 (451)
Q Consensus       290 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~  345 (451)
                      ....++|.|..  |++.|.....|..|+++|++++||.|++  |++.|.....|.+|++.
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            36678999999  9999999999999999999999999975  99999999999999863

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=8e-11  Score=75.43  Aligned_cols=39  Identities=38%  Similarity=0.652  Sum_probs=37.2

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            8 SGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.7e-11  Score=75.51  Aligned_cols=39  Identities=31%  Similarity=0.556  Sum_probs=37.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|...+.|..|+++|++++||.|+.|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            8 SGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             SCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.2e-11  Score=75.64  Aligned_cols=39  Identities=33%  Similarity=0.488  Sum_probs=36.8

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            8 TGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=6.8e-11  Score=75.76  Aligned_cols=39  Identities=38%  Similarity=0.695  Sum_probs=36.6

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      +++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            8 TGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             SSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.07  E-value=9.1e-11  Score=75.16  Aligned_cols=39  Identities=38%  Similarity=0.641  Sum_probs=37.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            8 TGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=6.9e-11  Score=75.74  Aligned_cols=39  Identities=38%  Similarity=0.687  Sum_probs=36.6

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            8 TGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=9.7e-11  Score=75.02  Aligned_cols=39  Identities=41%  Similarity=0.629  Sum_probs=36.7

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      +++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            8 TGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=8.9e-11  Score=75.21  Aligned_cols=39  Identities=38%  Similarity=0.704  Sum_probs=36.9

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            8 TGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=9.2e-11  Score=75.14  Aligned_cols=39  Identities=38%  Similarity=0.707  Sum_probs=36.7

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            8 TGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.06  E-value=8e-11  Score=75.42  Aligned_cols=39  Identities=33%  Similarity=0.564  Sum_probs=36.6

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            8 TGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=7.4e-11  Score=75.59  Aligned_cols=39  Identities=36%  Similarity=0.629  Sum_probs=37.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      +++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            8 TGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7.7e-11  Score=75.50  Aligned_cols=39  Identities=36%  Similarity=0.606  Sum_probs=36.1

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            8 TGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=9.8e-11  Score=74.99  Aligned_cols=39  Identities=36%  Similarity=0.555  Sum_probs=36.4

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            8 SGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7e-11  Score=75.71  Aligned_cols=39  Identities=33%  Similarity=0.594  Sum_probs=35.9

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            8 TGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.05  E-value=6.8e-11  Score=75.76  Aligned_cols=39  Identities=36%  Similarity=0.587  Sum_probs=35.9

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            8 TGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            788999999999999999999999999999999999887

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1e-10  Score=74.93  Aligned_cols=39  Identities=41%  Similarity=0.486  Sum_probs=36.9

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            8 TGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.05  E-value=7e-11  Score=75.71  Aligned_cols=39  Identities=36%  Similarity=0.566  Sum_probs=36.1

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            8 MGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            788999999999999999999999999999999999887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=7.6e-11  Score=75.53  Aligned_cols=39  Identities=33%  Similarity=0.497  Sum_probs=36.2

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            8 SSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7.9e-11  Score=75.46  Aligned_cols=39  Identities=36%  Similarity=0.591  Sum_probs=36.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            8 TGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.1e-10  Score=74.82  Aligned_cols=39  Identities=44%  Similarity=0.659  Sum_probs=37.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            8 SGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-10  Score=74.57  Aligned_cols=40  Identities=35%  Similarity=0.610  Sum_probs=37.8

Q ss_pred             CCCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      +.++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            7 GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3788999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=8.7e-11  Score=75.25  Aligned_cols=39  Identities=31%  Similarity=0.527  Sum_probs=36.2

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            8 TGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.3e-11  Score=76.28  Aligned_cols=44  Identities=34%  Similarity=0.451  Sum_probs=37.2

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            66778888888888888888888888888888888888888876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=8.7e-11  Score=75.25  Aligned_cols=39  Identities=36%  Similarity=0.548  Sum_probs=35.6

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            8 TGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             CCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            778899999999999999999999999999999999887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1.6e-10  Score=73.95  Aligned_cols=39  Identities=26%  Similarity=0.297  Sum_probs=37.2

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=9.3e-11  Score=75.11  Aligned_cols=39  Identities=33%  Similarity=0.370  Sum_probs=36.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            8 SGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            788999999999999999999999999999999999887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.6e-10  Score=74.00  Aligned_cols=40  Identities=40%  Similarity=0.602  Sum_probs=37.4

Q ss_pred             CCCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      +.++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            7 GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3788999999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.1e-10  Score=74.80  Aligned_cols=39  Identities=38%  Similarity=0.620  Sum_probs=36.2

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            8 TGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            788999999999999999999999999999999999887

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=4.2e-11  Score=75.95  Aligned_cols=44  Identities=43%  Similarity=0.646  Sum_probs=35.2

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|.+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45677788888888888888888888888888888888888776

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.1e-10  Score=74.80  Aligned_cols=39  Identities=41%  Similarity=0.685  Sum_probs=35.7

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      +++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            8 SGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            778899999999999999999999999999999999887

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.03  E-value=5.2e-11  Score=76.34  Aligned_cols=45  Identities=36%  Similarity=0.583  Sum_probs=36.9

Q ss_pred             HHHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        221 GHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       221 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      +|+++|.++++|.|.+|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366778888888888888888888888888888888888888776

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.03  E-value=1.1e-10  Score=74.81  Aligned_cols=39  Identities=38%  Similarity=0.549  Sum_probs=36.0

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      +++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            8 TGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            788999999999999999999999999999999999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=9.1e-11  Score=75.15  Aligned_cols=39  Identities=38%  Similarity=0.654  Sum_probs=36.1

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      +++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            8 TGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999887

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.03  E-value=5e-11  Score=76.39  Aligned_cols=44  Identities=39%  Similarity=0.586  Sum_probs=37.3

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66778888888888888888888888888888888888888876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.2e-10  Score=74.58  Aligned_cols=39  Identities=33%  Similarity=0.518  Sum_probs=36.4

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            8 SVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.1e-10  Score=74.71  Aligned_cols=39  Identities=33%  Similarity=0.585  Sum_probs=36.0

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            8 TGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            788999999999999999999999999999999999887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.2e-10  Score=74.62  Aligned_cols=39  Identities=44%  Similarity=0.665  Sum_probs=36.1

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            8 AGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            788999999999999999999999999999999999887

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.8e-10  Score=73.79  Aligned_cols=40  Identities=30%  Similarity=0.481  Sum_probs=37.9

Q ss_pred             CCCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      +.++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            7 GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            3788999999999999999999999999999999999988

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.3e-11  Score=76.28  Aligned_cols=44  Identities=39%  Similarity=0.628  Sum_probs=35.0

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56677778888888888888888888888888888888888776

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.02  E-value=1.5e-10  Score=74.15  Aligned_cols=40  Identities=30%  Similarity=0.584  Sum_probs=37.2

Q ss_pred             CCCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      +.++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            7 GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3788999999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.3e-11  Score=75.93  Aligned_cols=45  Identities=36%  Similarity=0.507  Sum_probs=36.9

Q ss_pred             HHHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        221 GHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       221 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      +|+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366778888888888888888888888888888888888888776

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.9e-11  Score=76.44  Aligned_cols=44  Identities=32%  Similarity=0.515  Sum_probs=35.8

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|+++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66777888888888888888888888888888888888888776

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.1e-11  Score=75.97  Aligned_cols=44  Identities=39%  Similarity=0.642  Sum_probs=36.0

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66777888888888888888888888888888888888888776

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.8e-11  Score=75.77  Aligned_cols=45  Identities=40%  Similarity=0.566  Sum_probs=36.0

Q ss_pred             HHHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        221 GHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       221 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      +|+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366777888888888888888888888888888888888888765

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.1e-11  Score=76.38  Aligned_cols=44  Identities=39%  Similarity=0.634  Sum_probs=34.1

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            56677777778888888888888888888877777777777766

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.2e-11  Score=76.33  Aligned_cols=44  Identities=34%  Similarity=0.545  Sum_probs=32.6

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777765

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.4e-11  Score=76.25  Aligned_cols=44  Identities=36%  Similarity=0.566  Sum_probs=35.6

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            66677888888888888888888888888888888888888776

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.6e-11  Score=76.16  Aligned_cols=44  Identities=39%  Similarity=0.568  Sum_probs=33.9

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777778888888888877778888777777777777766

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=4.6e-11  Score=76.59  Aligned_cols=44  Identities=36%  Similarity=0.504  Sum_probs=31.4

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666777777777777777777777777777777777777665

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.01  E-value=5.3e-11  Score=76.27  Aligned_cols=44  Identities=34%  Similarity=0.519  Sum_probs=34.4

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            56677777788888888888888888888877877777777766

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.4e-10  Score=74.27  Aligned_cols=39  Identities=41%  Similarity=0.704  Sum_probs=35.8

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      +++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            8 TGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            788999999999999999999999999999999999875

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.6e-11  Score=76.16  Aligned_cols=44  Identities=34%  Similarity=0.584  Sum_probs=35.9

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            66777888888888888888888888888888888888888776

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7.6e-11  Score=75.53  Aligned_cols=39  Identities=33%  Similarity=0.625  Sum_probs=34.2

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      +++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            8 TGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            778888888899988888888889888888888988887

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.2e-10  Score=74.53  Aligned_cols=39  Identities=33%  Similarity=0.623  Sum_probs=36.0

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            8 TGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             SSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            788999999999999999999999999999999999887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=6.3e-11  Score=75.92  Aligned_cols=44  Identities=32%  Similarity=0.573  Sum_probs=35.8

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            66677888888888888888888888888888888888888776

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5e-11  Score=76.38  Aligned_cols=45  Identities=33%  Similarity=0.459  Sum_probs=36.3

Q ss_pred             HHHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        221 GHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       221 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      +|+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366778888888888888888888888888888888888888776

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7e-11  Score=75.69  Aligned_cols=44  Identities=32%  Similarity=0.498  Sum_probs=33.9

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56677777777888888878777777778777777777777766

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.2e-11  Score=75.94  Aligned_cols=44  Identities=39%  Similarity=0.598  Sum_probs=35.0

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56677788888888888888888888888888888888887776

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5e-11  Score=76.41  Aligned_cols=44  Identities=36%  Similarity=0.556  Sum_probs=31.0

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            55666777777777777777777777777777777777777665

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=2.2e-10  Score=74.11  Aligned_cols=43  Identities=30%  Similarity=0.553  Sum_probs=39.8

Q ss_pred             CCCCCcCeeccccccccCChHHHHHHHHHhcCCCceecccCcc
Q psy18077        289 SSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGK  331 (451)
Q Consensus       289 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  331 (451)
                      .+.++++|.|.+|++.|.....|..|+++|++++||.|++|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3477899999999999999999999999999999999999985

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7e-11  Score=75.72  Aligned_cols=44  Identities=41%  Similarity=0.597  Sum_probs=33.5

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777766

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.4e-11  Score=75.87  Aligned_cols=44  Identities=32%  Similarity=0.486  Sum_probs=34.1

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56677777778888888888888888888877777777777766

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7e-11  Score=75.71  Aligned_cols=44  Identities=39%  Similarity=0.645  Sum_probs=33.8

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777777787788777777777777777777777777765

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5.6e-11  Score=76.18  Aligned_cols=44  Identities=36%  Similarity=0.542  Sum_probs=32.6

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777765

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.00  E-value=5.8e-11  Score=76.11  Aligned_cols=44  Identities=34%  Similarity=0.518  Sum_probs=33.3

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777765

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.8e-11  Score=75.75  Aligned_cols=44  Identities=36%  Similarity=0.570  Sum_probs=36.6

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678888888888888888888888888888888888888776

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5.5e-11  Score=76.19  Aligned_cols=44  Identities=41%  Similarity=0.644  Sum_probs=35.8

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            66777888888888888888888888888888888888888776

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.00  E-value=5.3e-11  Score=76.28  Aligned_cols=44  Identities=36%  Similarity=0.539  Sum_probs=31.6

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777665

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5.4e-11  Score=76.26  Aligned_cols=45  Identities=27%  Similarity=0.490  Sum_probs=36.2

Q ss_pred             HHHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        221 GHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       221 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            366777888888888888888888888888888888888888776

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.3e-11  Score=75.91  Aligned_cols=44  Identities=27%  Similarity=0.400  Sum_probs=32.8

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777766

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.8e-11  Score=75.77  Aligned_cols=44  Identities=41%  Similarity=0.450  Sum_probs=35.3

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677788888888888888888888888888888888888776

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=5.7e-11  Score=76.14  Aligned_cols=44  Identities=25%  Similarity=0.385  Sum_probs=32.3

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777665

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=8.6e-11  Score=75.28  Aligned_cols=44  Identities=36%  Similarity=0.550  Sum_probs=35.0

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|.+|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56677778888888888888888888888888888888888776

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=6.2e-11  Score=75.97  Aligned_cols=44  Identities=34%  Similarity=0.537  Sum_probs=31.1

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566777777777777777777777777777777777777665

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3.4e-10  Score=72.44  Aligned_cols=39  Identities=44%  Similarity=0.712  Sum_probs=36.8

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            8 SGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            788999999999999999999999999999999999875

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=7.7e-11  Score=75.51  Aligned_cols=44  Identities=36%  Similarity=0.613  Sum_probs=32.5

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777665

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.99  E-value=3.9e-10  Score=71.76  Aligned_cols=42  Identities=31%  Similarity=0.571  Sum_probs=39.3

Q ss_pred             CCCCCcCeeccccccccCChHHHHHHHHHhcCCCceecccCc
Q psy18077        289 SSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCG  330 (451)
Q Consensus       289 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  330 (451)
                      .++++++|.|.+|++.|.....|..|+++|+++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            347889999999999999999999999999999999999996

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=8.7e-11  Score=75.26  Aligned_cols=44  Identities=20%  Similarity=0.216  Sum_probs=35.8

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677888888888888888888888888888888888888776

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=7.4e-11  Score=75.60  Aligned_cols=44  Identities=39%  Similarity=0.590  Sum_probs=35.8

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            56677888888888888888888888888888888888888776

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.99  E-value=6.7e-11  Score=75.78  Aligned_cols=44  Identities=39%  Similarity=0.505  Sum_probs=31.7

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777665

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=7.1e-11  Score=75.67  Aligned_cols=44  Identities=30%  Similarity=0.334  Sum_probs=32.4

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777665

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=6.6e-11  Score=75.81  Aligned_cols=44  Identities=34%  Similarity=0.571  Sum_probs=32.1

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777665

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.97  E-value=1e-10  Score=74.86  Aligned_cols=44  Identities=30%  Similarity=0.535  Sum_probs=34.0

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45667777778888888888888888888877877777777766

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=5.4e-11  Score=76.25  Aligned_cols=44  Identities=36%  Similarity=0.576  Sum_probs=34.2

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56677777788888888888888888888877777777777766

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.4e-10  Score=73.48  Aligned_cols=39  Identities=31%  Similarity=0.551  Sum_probs=36.1

Q ss_pred             CCCcCeeccccccccCChHHHHHHHH-HhcCCCceecccC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQ-THSKVKPFVCEKC  329 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  329 (451)
                      .++++|.|.+|++.|.....|..|++ +|++++||.|+.|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            8 TGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             CCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            78899999999999999999999999 9999999999887

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=9.6e-11  Score=75.05  Aligned_cols=44  Identities=27%  Similarity=0.440  Sum_probs=34.8

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45667778888888888888888888888888888888888776

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.1e-10  Score=74.85  Aligned_cols=44  Identities=41%  Similarity=0.642  Sum_probs=32.7

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777654

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.96  E-value=4.9e-11  Score=81.87  Aligned_cols=49  Identities=20%  Similarity=0.417  Sum_probs=42.8

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecccCcccccChhhHHhc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKH  342 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  342 (451)
                      .+++||.|+.|++.|.....|.   ++|++++||.|+.|++.|.....+..+
T Consensus        10 ~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A           10 TNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             CCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccccc
Confidence            7889999999999999888876   789999999999999999887765544

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5.7e-11  Score=76.11  Aligned_cols=44  Identities=34%  Similarity=0.573  Sum_probs=25.8

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|+++++|.|.+|++.|.+...|..|+++|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44555555566666666666666666666655655555555554

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.4e-10  Score=74.65  Aligned_cols=44  Identities=32%  Similarity=0.507  Sum_probs=33.6

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHH-HcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQ-THSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.....|..|++ .|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            5666777777777777777777777777777 7777777777766

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.2e-10  Score=71.96  Aligned_cols=42  Identities=33%  Similarity=0.585  Sum_probs=38.8

Q ss_pred             CCCCCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        288 DSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       288 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      ..+.++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345889999999999999999999999999999999999987

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.94  E-value=5.7e-10  Score=71.35  Aligned_cols=38  Identities=37%  Similarity=0.635  Sum_probs=35.8

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            8 TGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            78899999999999999999999999999999999974

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.7e-10  Score=73.82  Aligned_cols=44  Identities=39%  Similarity=0.637  Sum_probs=34.8

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677788888888888888888888888888888888887764

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=4.1e-10  Score=74.82  Aligned_cols=46  Identities=26%  Similarity=0.577  Sum_probs=30.1

Q ss_pred             hcCCCCcccccchhhcCChHhHHHHHH-HcCCCCCeecccccccccC
Q psy18077        226 HTGEKPFKCKVCDKAFADKSNLRAHIQ-THSKVKPFVCEKCGKAFAL  271 (451)
Q Consensus       226 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  271 (451)
                      |.++++|.|.+|++.|.....|..|++ .|.+++||.|.+|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            455666666666666666666666665 6666666666666666654

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=6.7e-10  Score=70.99  Aligned_cols=38  Identities=45%  Similarity=0.704  Sum_probs=35.8

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            8 TGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            78899999999999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=6.7e-10  Score=70.99  Aligned_cols=38  Identities=45%  Similarity=0.789  Sum_probs=35.7

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         8 ~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            8 TGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            78899999999999999999999999999999999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=7.3e-10  Score=70.82  Aligned_cols=38  Identities=34%  Similarity=0.640  Sum_probs=35.7

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            8 TGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            78899999999999999999999999999999999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=8e-10  Score=70.64  Aligned_cols=41  Identities=39%  Similarity=0.632  Sum_probs=37.8

Q ss_pred             CCCCCcCeeccccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        289 SSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       289 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      .+.++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34788999999999999999999999999999999999987

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.91  E-value=7.3e-10  Score=69.27  Aligned_cols=37  Identities=35%  Similarity=0.600  Sum_probs=34.0

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  327 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (451)
                      +++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            6 SGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            7789999999999999999999999999999999985

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=7.5e-10  Score=70.75  Aligned_cols=38  Identities=37%  Similarity=0.677  Sum_probs=35.8

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            8 TGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            78899999999999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=5.8e-10  Score=71.30  Aligned_cols=38  Identities=37%  Similarity=0.593  Sum_probs=35.0

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            8 TGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            78899999999999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=7.3e-10  Score=70.81  Aligned_cols=38  Identities=47%  Similarity=0.739  Sum_probs=35.2

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            8 TGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            78899999999999999999999999999999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.1e-09  Score=68.47  Aligned_cols=37  Identities=30%  Similarity=0.576  Sum_probs=34.5

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  327 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            6 SGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            7889999999999999999999999999999999984

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=6.4e-10  Score=71.10  Aligned_cols=38  Identities=37%  Similarity=0.635  Sum_probs=34.8

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|..|++.|.....|..|+++|++++||.|++
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            8 TGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            78899999999999999999999999999999999874

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=9.7e-10  Score=70.24  Aligned_cols=38  Identities=34%  Similarity=0.588  Sum_probs=35.7

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            8 AGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            78899999999999999999999999999999999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=9e-10  Score=70.38  Aligned_cols=38  Identities=32%  Similarity=0.617  Sum_probs=35.5

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            8 TGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             SSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            78899999999999999999999999999999999963

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1e-09  Score=69.37  Aligned_cols=37  Identities=41%  Similarity=0.675  Sum_probs=34.7

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  327 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            8 TGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            7889999999999999999999999999999999985

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=9.9e-10  Score=70.20  Aligned_cols=37  Identities=41%  Similarity=0.656  Sum_probs=35.2

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  327 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            8 TGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            7889999999999999999999999999999999996

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.7e-10  Score=70.69  Aligned_cols=38  Identities=34%  Similarity=0.647  Sum_probs=35.0

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            8 TGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             SSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             CCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            78899999999999999999999999999999999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.88  E-value=3.3e-10  Score=70.85  Aligned_cols=42  Identities=31%  Similarity=0.535  Sum_probs=31.4

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            455677777777777777777777777777777777777764

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.8e-10  Score=70.68  Aligned_cols=38  Identities=34%  Similarity=0.628  Sum_probs=34.7

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            8 TGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            78899999999999999999999999999999999874

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.9e-10  Score=70.67  Aligned_cols=38  Identities=37%  Similarity=0.630  Sum_probs=34.7

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            8 MGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            78899999999999999999999999999999999964

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.88  E-value=3.5e-10  Score=72.34  Aligned_cols=43  Identities=37%  Similarity=0.580  Sum_probs=35.3

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeeccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  264 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  264 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6677888888888888888888888888888888888888863

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.7e-10  Score=70.70  Aligned_cols=38  Identities=37%  Similarity=0.649  Sum_probs=34.4

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            8 TGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            77899999999999999999999999999999999864

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.1e-10  Score=70.87  Aligned_cols=38  Identities=34%  Similarity=0.641  Sum_probs=34.2

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      +++++|.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            8 TGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            77889999999999999999999999999999999864

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=8.4e-10  Score=70.52  Aligned_cols=38  Identities=42%  Similarity=0.730  Sum_probs=34.8

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            8 TGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            78899999999999999999999999999999999964

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5e-10  Score=70.01  Aligned_cols=42  Identities=26%  Similarity=0.514  Sum_probs=33.9

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            456778888888888888888888888888888888888773

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=8e-10  Score=70.63  Aligned_cols=38  Identities=39%  Similarity=0.710  Sum_probs=34.4

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            8 SGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            77899999999999999999999999999999999864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.1e-09  Score=69.99  Aligned_cols=38  Identities=34%  Similarity=0.580  Sum_probs=34.9

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         8 ~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            8 TGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             SSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            78899999999999999999999999999999999964

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=3.8e-10  Score=72.16  Aligned_cols=43  Identities=35%  Similarity=0.584  Sum_probs=34.9

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeeccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  264 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  264 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            6677888888888888888888888888888888888888763

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.2e-09  Score=69.05  Aligned_cols=37  Identities=32%  Similarity=0.662  Sum_probs=34.5

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  327 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (451)
                      .+++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            8 AGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             SCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            7889999999999999999999999999999999984

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.2e-10  Score=70.84  Aligned_cols=38  Identities=37%  Similarity=0.648  Sum_probs=34.6

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            8 TGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            77899999999999999999999999999999999864

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.2e-09  Score=69.75  Aligned_cols=38  Identities=29%  Similarity=0.558  Sum_probs=35.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            8 SGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            78899999999999999999999999999999999963

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=4.2e-10  Score=71.96  Aligned_cols=43  Identities=37%  Similarity=0.580  Sum_probs=33.8

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeeccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  264 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  264 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            5667777888888888888888888888888888888887753

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=4.4e-10  Score=71.86  Aligned_cols=43  Identities=44%  Similarity=0.641  Sum_probs=35.2

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeeccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  264 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  264 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            6677888888888888888888888888888888888888863

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=1.1e-09  Score=69.65  Aligned_cols=42  Identities=29%  Similarity=0.584  Sum_probs=33.5

Q ss_pred             HhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeeccccc
Q psy18077        225 THTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCG  266 (451)
Q Consensus       225 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  266 (451)
                      .|.++++|.|.+|++.|.....|..|++.|.++++|.|++|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            467778888888888888888888888888888888888775

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.9e-10  Score=70.41  Aligned_cols=38  Identities=42%  Similarity=0.682  Sum_probs=34.5

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            8 TGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            78899999999999999999999999999999999864

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=4.5e-10  Score=71.81  Aligned_cols=43  Identities=44%  Similarity=0.716  Sum_probs=34.7

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeeccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  264 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  264 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6677788888888888888888888888888888888888763

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5e-10  Score=71.58  Aligned_cols=43  Identities=35%  Similarity=0.590  Sum_probs=35.1

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeeccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  264 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  264 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6677888888888888888888888888888888888888763

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=4.5e-10  Score=71.81  Aligned_cols=43  Identities=35%  Similarity=0.574  Sum_probs=33.5

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeeccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  264 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  264 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667777788888888888888888888888888888877753

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=3.9e-10  Score=72.12  Aligned_cols=42  Identities=38%  Similarity=0.555  Sum_probs=32.3

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            566777777777777777777777777777777777777775

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.85  E-value=8.1e-10  Score=73.35  Aligned_cols=51  Identities=29%  Similarity=0.384  Sum_probs=40.5

Q ss_pred             ccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccCChHHHHHHHHHhcCCCcee
Q psy18077        267 KAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFV  325 (451)
Q Consensus       267 ~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  325 (451)
                      +.|.....|..|++.|        .++++|.|.+|++.|.....|..|+++|++++||.
T Consensus         4 k~~~~~~~l~~h~~~H--------~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRS--------QSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCSCSSCCCCCHHHH--------TSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cccCCCcchhhHHHhc--------CCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            5566777777777777        67788888888888888888888888888888773

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.1e-10  Score=71.21  Aligned_cols=43  Identities=33%  Similarity=0.527  Sum_probs=35.5

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeeccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  264 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  264 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5677888888888888888888888888888888888888863

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=9.9e-10  Score=69.42  Aligned_cols=37  Identities=35%  Similarity=0.544  Sum_probs=33.6

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  327 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            8 TGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            7788999999999999999999999999999999885

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=4.7e-10  Score=71.72  Aligned_cols=42  Identities=36%  Similarity=0.598  Sum_probs=32.7

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            566777777888888888888888888888778777777775

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=4.7e-10  Score=71.75  Aligned_cols=43  Identities=37%  Similarity=0.591  Sum_probs=34.0

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeeccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  264 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  264 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            5667778888888888888888888888888888888887753

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=4.9e-10  Score=71.64  Aligned_cols=43  Identities=47%  Similarity=0.672  Sum_probs=33.5

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeeccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  264 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  264 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667777788888888888888888888888888888877753

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=5.3e-10  Score=71.51  Aligned_cols=43  Identities=35%  Similarity=0.574  Sum_probs=33.7

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeeccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  264 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  264 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5667777888888888888888888888888888888887753

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=4.9e-10  Score=71.63  Aligned_cols=42  Identities=43%  Similarity=0.635  Sum_probs=33.9

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            666777888888888888888888888888888888888775

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.2e-09  Score=69.81  Aligned_cols=38  Identities=39%  Similarity=0.722  Sum_probs=35.7

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            8 SGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             SCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            78899999999999999999999999999999999963

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1e-09  Score=70.18  Aligned_cols=39  Identities=41%  Similarity=0.667  Sum_probs=34.4

Q ss_pred             CCCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      +.++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            7 GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            378889999999999999999999999999999999864

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=4.5e-10  Score=71.81  Aligned_cols=43  Identities=37%  Similarity=0.617  Sum_probs=34.8

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeeccc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  264 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  264 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            6677788888888888888888888888888888888888763

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=6.6e-10  Score=71.05  Aligned_cols=42  Identities=26%  Similarity=0.509  Sum_probs=34.7

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.....|..|+++|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566788888888888888888888888888888888888875

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=5.2e-10  Score=71.53  Aligned_cols=42  Identities=36%  Similarity=0.544  Sum_probs=32.4

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            566777777788888888888878888887777777777775

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.84  E-value=2.1e-09  Score=67.07  Aligned_cols=36  Identities=28%  Similarity=0.603  Sum_probs=34.0

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceec
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC  326 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  326 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         7 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            7 GGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            788999999999999999999999999999999987

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=6.8e-10  Score=70.20  Aligned_cols=42  Identities=40%  Similarity=0.614  Sum_probs=34.0

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            667778888888888888888888888888888888888774

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.84  E-value=3.6e-11  Score=82.54  Aligned_cols=53  Identities=23%  Similarity=0.408  Sum_probs=37.0

Q ss_pred             HHHHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHH
Q psy18077        220 QGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYL  275 (451)
Q Consensus       220 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  275 (451)
                      ..|+++|.++++|.|+.|++.|.....|.   +.|.+++||.|.+|++.|.....+
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            34666777777777777777777766665   667777777777777777665543

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=4.7e-10  Score=71.73  Aligned_cols=42  Identities=40%  Similarity=0.653  Sum_probs=30.2

Q ss_pred             HHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        224 RTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       224 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      ++|.++++|.|.+|++.|.....|..|++.|.+++||.|.+|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            456677777777777777777777777777777777777665

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.2e-09  Score=68.96  Aligned_cols=37  Identities=32%  Similarity=0.576  Sum_probs=33.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  327 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            8 TGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            7788999999999999999999999999999999885

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.6e-09  Score=67.62  Aligned_cols=36  Identities=36%  Similarity=0.736  Sum_probs=34.1

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceec
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC  326 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  326 (451)
                      .++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         7 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            7 GGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            788999999999999999999999999999999987

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=5.3e-10  Score=70.70  Aligned_cols=42  Identities=33%  Similarity=0.527  Sum_probs=32.3

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            566777777788888888888888888887777777777774

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=5.9e-10  Score=71.28  Aligned_cols=42  Identities=36%  Similarity=0.647  Sum_probs=32.0

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            566677777777777777777777777777777777777775

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=5e-10  Score=71.61  Aligned_cols=42  Identities=38%  Similarity=0.605  Sum_probs=30.9

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            556677777777777777777777777777777777777775

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.4e-09  Score=69.49  Aligned_cols=37  Identities=32%  Similarity=0.646  Sum_probs=35.2

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  327 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            8 TGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             CCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            7889999999999999999999999999999999996

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=6.3e-10  Score=71.13  Aligned_cols=42  Identities=33%  Similarity=0.577  Sum_probs=35.1

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            667788888888888888888888888888888888888875

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=5.2e-10  Score=71.52  Aligned_cols=42  Identities=33%  Similarity=0.606  Sum_probs=33.1

Q ss_pred             HHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        224 RTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       224 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      ++|.++++|.|.+|++.|.+...|..|++.|.+++||.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            457777888888888888888888888888887888887776

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.4e-09  Score=68.75  Aligned_cols=37  Identities=22%  Similarity=0.425  Sum_probs=33.5

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  327 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (451)
                      .++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            8 HTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            7788999999999999999999999999999999884

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.83  E-value=1.2e-09  Score=70.46  Aligned_cols=42  Identities=29%  Similarity=0.513  Sum_probs=25.7

Q ss_pred             hcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecccccc
Q psy18077        226 HTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGK  267 (451)
Q Consensus       226 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  267 (451)
                      |.++++|.|.+|++.|.+...|..|+++|.+++||.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            345556666666666666666666666666666666666653

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.83  E-value=3.4e-09  Score=66.54  Aligned_cols=40  Identities=25%  Similarity=0.406  Sum_probs=36.7

Q ss_pred             CCCCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        289 SSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       289 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++++|.|..|++.|.....|..|+++|++++||.|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            3478899999999999999999999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=5.2e-10  Score=71.52  Aligned_cols=42  Identities=43%  Similarity=0.679  Sum_probs=32.0

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            566677777777777777777777777777777777777775

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.4e-09  Score=69.48  Aligned_cols=38  Identities=37%  Similarity=0.666  Sum_probs=34.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            8 TGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            77899999999999999999999999999999999863

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=5.3e-10  Score=71.51  Aligned_cols=42  Identities=43%  Similarity=0.634  Sum_probs=30.3

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            456677777777777777777777777777777777777765

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.5e-09  Score=69.33  Aligned_cols=38  Identities=34%  Similarity=0.559  Sum_probs=34.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcC-CCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSK-VKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~  328 (451)
                      .++++|.|.+|++.|.....|..|+++|++ ++||.|++
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            8 QKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            778899999999999999999999999999 99999864

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=6.6e-10  Score=70.25  Aligned_cols=42  Identities=36%  Similarity=0.498  Sum_probs=32.3

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            566777777788888888888888888888777777777774

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.82  E-value=3.7e-10  Score=75.02  Aligned_cols=50  Identities=24%  Similarity=0.356  Sum_probs=37.8

Q ss_pred             cccCCHHHHHHHHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCe
Q psy18077        211 KSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPF  260 (451)
Q Consensus       211 ~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  260 (451)
                      +.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|++++||
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            45666666777777777777888888888888888888888777777765

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=7.4e-10  Score=70.02  Aligned_cols=42  Identities=31%  Similarity=0.591  Sum_probs=34.0

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            667778888888888888888888888888888888888774

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=6.8e-10  Score=70.96  Aligned_cols=43  Identities=40%  Similarity=0.587  Sum_probs=34.6

Q ss_pred             HHHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        221 GHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       221 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      +|+++|.++++|.|.+|++.|.....|..|++.|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            3667778888888888888888888888888888888888775

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=2.8e-09  Score=67.29  Aligned_cols=38  Identities=21%  Similarity=0.308  Sum_probs=35.2

Q ss_pred             CCCCcCeeccccccccCChHHHHHHHHHhcCCCceecc
Q psy18077        290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  327 (451)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (451)
                      +.++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            7 GAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            37889999999999999999999999999999999985

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=4.6e-09  Score=67.02  Aligned_cols=40  Identities=30%  Similarity=0.450  Sum_probs=36.8

Q ss_pred             CCCCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        289 SSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       289 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .+.++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            4478899999999999999999999999999999999964

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.1e-09  Score=68.50  Aligned_cols=36  Identities=39%  Similarity=0.773  Sum_probs=30.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceec
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC  326 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  326 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         7 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            7 GGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            677888888888888888888888888888888877

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.9e-09  Score=68.80  Aligned_cols=39  Identities=38%  Similarity=0.706  Sum_probs=34.5

Q ss_pred             CCCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      +.++++|.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            7 GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            378889999999999999999999999999999999863

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.8e-09  Score=68.20  Aligned_cols=37  Identities=24%  Similarity=0.475  Sum_probs=34.0

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  327 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         8 ~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            8 TDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            7889999999999999999999999999999999884

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.79  E-value=1e-09  Score=68.59  Aligned_cols=41  Identities=27%  Similarity=0.554  Sum_probs=31.9

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeec
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC  262 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  262 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            45667777888888888888888888888888888777776

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=6.9e-10  Score=70.96  Aligned_cols=42  Identities=31%  Similarity=0.466  Sum_probs=30.6

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCC-CCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSK-VKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.+ ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55667777777777777777777777777777777 7777775

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=7.4e-10  Score=70.81  Aligned_cols=42  Identities=36%  Similarity=0.658  Sum_probs=35.4

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.....|..|+++|.+++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            667788888888888888888888888888888888888886

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=1.7e-09  Score=67.49  Aligned_cols=36  Identities=28%  Similarity=0.700  Sum_probs=32.0

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceec
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC  326 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  326 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         7 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            7 GGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            778889999999999999999999999999988887

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=9.2e-10  Score=70.33  Aligned_cols=42  Identities=38%  Similarity=0.621  Sum_probs=32.5

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566777777788888888888888888888777777777775

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=6.3e-10  Score=69.55  Aligned_cols=41  Identities=37%  Similarity=0.703  Sum_probs=26.9

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeec
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC  262 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  262 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            45556666666666666666666666666666666666655

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=7.7e-10  Score=69.16  Aligned_cols=41  Identities=27%  Similarity=0.639  Sum_probs=29.0

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeec
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC  262 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  262 (451)
                      |+++|.++++|.|.+|++.|.+...|..|++.|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45566677777777777777777777777777777777665

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1e-09  Score=70.11  Aligned_cols=42  Identities=40%  Similarity=0.671  Sum_probs=31.3

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455677777777777777777777777777777777777775

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=9e-10  Score=69.63  Aligned_cols=42  Identities=19%  Similarity=0.315  Sum_probs=29.6

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            556667777777777777777777777777777777777663

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=4.4e-09  Score=66.72  Aligned_cols=40  Identities=35%  Similarity=0.601  Sum_probs=36.3

Q ss_pred             CCCCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        289 SSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       289 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .+.++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            3478899999999999999999999999999999999974

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=1.5e-09  Score=68.57  Aligned_cols=42  Identities=19%  Similarity=0.229  Sum_probs=33.8

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            456677888888888888888888888888888888888774

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=7.1e-10  Score=69.31  Aligned_cols=41  Identities=34%  Similarity=0.671  Sum_probs=31.0

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeec
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC  262 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  262 (451)
                      |+++|.++++|.|..|++.|.+...|..|++.|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            45667777777777777777777777777777777777766

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=4.9e-09  Score=66.15  Aligned_cols=37  Identities=43%  Similarity=0.592  Sum_probs=33.8

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceecc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  327 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (451)
                      .++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            8 SGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            7889999999999999999999999999999999873

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=8.4e-10  Score=70.52  Aligned_cols=43  Identities=33%  Similarity=0.578  Sum_probs=35.5

Q ss_pred             HHHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        221 GHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       221 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      .|+++|.++++|.|.+|++.|.....|..|++.|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667788888888888888888888888888888888888875

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=6.9e-09  Score=66.80  Aligned_cols=40  Identities=35%  Similarity=0.572  Sum_probs=36.9

Q ss_pred             CCCCcCeecc--ccccccCChHHHHHHHHHhcCCCceecccC
Q psy18077        290 SSSEKPFKCK--VCDKAFADKSNLRAHIQTHSKVKPFVCEKC  329 (451)
Q Consensus       290 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (451)
                      +.++++|.|.  .|++.|.....|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            7 GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4788999998  899999999999999999999999999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.1e-09  Score=69.23  Aligned_cols=41  Identities=24%  Similarity=0.401  Sum_probs=30.1

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeec
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC  262 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  262 (451)
                      |+++|.++++|.|.+|++.|.....|..|+++|.+++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            55667777777777777777777777777777777777766

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=6.5e-09  Score=64.43  Aligned_cols=37  Identities=30%  Similarity=0.590  Sum_probs=33.6

Q ss_pred             CCCCcCeeccccccccCChHHHHHHHHHhcCCCceec
Q psy18077        290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC  326 (451)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  326 (451)
                      +.++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4778999999999999999999999999999999987

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.4e-09  Score=67.61  Aligned_cols=41  Identities=39%  Similarity=0.547  Sum_probs=32.1

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeec
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC  262 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  262 (451)
                      |+++|.++++|.|.+|++.|.....|..|++.|.+++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            56677777888888888888888888888888887777766

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.71  E-value=5.7e-09  Score=65.47  Aligned_cols=40  Identities=23%  Similarity=0.419  Sum_probs=31.3

Q ss_pred             HhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeeccc
Q psy18077        225 THTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  264 (451)
Q Consensus       225 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  264 (451)
                      +|.++++|.|..|++.|.....|..|++.|.+++||.|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4677778888888888888888888888888888887753

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=4e-09  Score=67.28  Aligned_cols=41  Identities=29%  Similarity=0.429  Sum_probs=32.8

Q ss_pred             HHHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        223 IRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       223 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      +++|.++++|.|.+|++.|.+...|..|++.|.+++||.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            34677788888888888888888888888888888888875

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=2.9e-09  Score=68.63  Aligned_cols=42  Identities=38%  Similarity=0.598  Sum_probs=29.1

Q ss_pred             HHhcCCCCcccc--cchhhcCChHhHHHHHHHcCCCCCeecccc
Q psy18077        224 RTHTGEKPFKCK--VCDKAFADKSNLRAHIQTHSKVKPFVCEKC  265 (451)
Q Consensus       224 ~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  265 (451)
                      ++|.++++|.|.  .|++.|.....|..|++.|.+++||.|.+|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            456666777776  677777777777777777777777777665

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=4e-09  Score=75.11  Aligned_cols=65  Identities=18%  Similarity=0.331  Sum_probs=52.2

Q ss_pred             HHHhchhhcCCCCcCCCCCCcCeeccccccccCChHHHHHHHHHhcCCCceecccCcccccChhhHHhcccccCCC
Q psy18077        274 YLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLK  349 (451)
Q Consensus       274 ~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~  349 (451)
                      .|..|++.+        .+++++.|..|++.|. ...|..|+ .|.+++||.|+.|++.|. ...|..|++.+.+.
T Consensus         4 ~L~~H~~~~--------c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            4 GSSGHEETE--------CPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCSCCCCCC--------CCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             HHHhhCccc--------CCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            355666555        6778999999999995 88999999 889999999999999877 58899998755443

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=3.3e-09  Score=67.30  Aligned_cols=40  Identities=38%  Similarity=0.648  Sum_probs=28.8

Q ss_pred             HHhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeecc
Q psy18077        224 RTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCE  263 (451)
Q Consensus       224 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  263 (451)
                      ++|.++++|.|.+|++.|.....|..|++.|.+++||.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            3566777777777777777777777777777777777765

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=2.8e-09  Score=75.95  Aligned_cols=51  Identities=18%  Similarity=0.368  Sum_probs=29.3

Q ss_pred             ccccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHcCC
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQ  422 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  422 (451)
                      +|.|..|++.|. ...|..|+ .|.+   ++||.|+.|++.|. ...|..|+++|.+
T Consensus        17 ~~~C~~C~~~~~-~~~L~~H~-~~c~---~~~~~C~~C~~~~~-~~~l~~H~~~c~~   67 (75)
T 2d9k_A           17 LAVCQHCDLELS-ILKLKEHE-DYCG---ARTELCGNCGRNVL-VKDLKTHPEVCGR   67 (75)
T ss_dssp             CEECSSSCCEEC-HHHHHHHH-HHHH---HCEEECSSSCCEEE-TTGGGTHHHHBTT
T ss_pred             ccCCcccChHhh-HHHHHHHH-hHcC---CCceEcccCCCcCc-HHHHHHHHHHccC
Confidence            456666666663 56666665 5554   55666666666554 3556666655543

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=8.5e-09  Score=63.88  Aligned_cols=38  Identities=26%  Similarity=0.592  Sum_probs=25.9

Q ss_pred             HhcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeec
Q psy18077        225 THTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC  262 (451)
Q Consensus       225 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  262 (451)
                      +|.++++|.|.+|++.|.....|..|++.|.+++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            45666667777777777777777777766766666665

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.62  E-value=5.2e-09  Score=76.95  Aligned_cols=56  Identities=14%  Similarity=0.292  Sum_probs=47.1

Q ss_pred             CCCCCcCeeccccccccCChHHHHHHHHHhcCCCceecccCcccccChhhHHhcccccCC
Q psy18077        289 SSSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCL  348 (451)
Q Consensus       289 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~  348 (451)
                      .+.++++|.|.+|++.|.....|..|+++|++++||.|..|.    ....|..|.+.+.+
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            347899999999999999999999999999999999997765    45566777665544

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.59  E-value=3.9e-08  Score=66.54  Aligned_cols=39  Identities=28%  Similarity=0.476  Sum_probs=35.4

Q ss_pred             CCCCcCeeccc--cccccCChHHHHHHH-HHhcCCCceeccc
Q psy18077        290 SSSEKPFKCKV--CDKAFADKSNLRAHI-QTHSKVKPFVCEK  328 (451)
Q Consensus       290 ~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~  328 (451)
                      .++++||.|.+  |++.|...+.|..|+ ++|++++||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            48899999976  999999999999998 6899999999864

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.54  E-value=4.8e-08  Score=59.62  Aligned_cols=36  Identities=17%  Similarity=0.514  Sum_probs=32.4

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceec
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC  326 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  326 (451)
                      +++++|.|.+|++.|.....|..|+++|++++||.+
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            567899999999999999999999999999999875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.49  E-value=8.5e-08  Score=56.04  Aligned_cols=32  Identities=28%  Similarity=0.465  Sum_probs=29.5

Q ss_pred             cCeeccccccccCChHHHHHHHHHhcCCCcee
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHSKVKPFV  325 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  325 (451)
                      +||.|.+|++.|.....|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47999999999999999999999999999885

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.48  E-value=4.5e-08  Score=58.89  Aligned_cols=35  Identities=17%  Similarity=0.400  Sum_probs=21.7

Q ss_pred             HHHhccCCCCCCCcccCccccccCChHHHHHHHHHcCC
Q psy18077        385 HRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQ  422 (451)
Q Consensus       385 H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  422 (451)
                      |+++|.+   ++||.|+.|++.|.....|..|+++|++
T Consensus         2 H~~~h~~---~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTG---IKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCC---SSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCC---CCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            4455554   5666666666666666666666666654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=3.5e-08  Score=59.42  Aligned_cols=28  Identities=39%  Similarity=0.768  Sum_probs=17.1

Q ss_pred             cccccccccCCChhhHHHHHhhhcCCCC
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRTHTGGTN  451 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~  451 (451)
                      |.|.+|++.|.+...|..|+++|++++|
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A           10 YSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             cCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            5555666666666666666666666654

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.46  E-value=1.1e-07  Score=55.63  Aligned_cols=29  Identities=34%  Similarity=0.500  Sum_probs=20.1

Q ss_pred             ccccccccccCCChhhHHHHHhhhcCCCC
Q psy18077        423 ICQCPHCSKSFSRPWLLQGHIRTHTGGTN  451 (451)
Q Consensus       423 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  451 (451)
                      +|.|++|++.|.+...|..|+++|+|++|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~   30 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGE   30 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            46677777777777777777777777664

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.43  E-value=8.9e-08  Score=58.39  Aligned_cols=37  Identities=16%  Similarity=0.473  Sum_probs=24.2

Q ss_pred             hcCCCCcccccchhhcCChHhHHHHHHHcCCCCCeec
Q psy18077        226 HTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVC  262 (451)
Q Consensus       226 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  262 (451)
                      |.++++|.|.+|++.|.....|..|++.|.+++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            3456667777777777777777777777766666654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.41  E-value=9.6e-09  Score=75.51  Aligned_cols=64  Identities=11%  Similarity=0.194  Sum_probs=44.5

Q ss_pred             cccccccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHcCCccccccccccC
Q psy18077        363 TTISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPHCSKSF  433 (451)
Q Consensus       363 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f  433 (451)
                      ...+|.|++|++.|.....|..|+++|++   ++||+|..|.    ....|..|.+.|.+.|..-.....|
T Consensus        22 ~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~---ekp~~C~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~   85 (88)
T 1x6f_A           22 QNSTYQCKHCDSKLQSTAELTSHLNIHNE---EFQKRAKRQE----RRKQLLSKQKYADGAFADFKQESGP   85 (88)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHHH---HHHHHCCCCS----CCCCCCCCCCCCCCSSSCCCCCCCC
T ss_pred             CCCCCcCCCCCCEeCCHHHHHHHHHHhCC---CCCcccchhh----hHHHHHhhhcccccccccccccCCC
Confidence            34578888888888888888888888876   7888887654    3445666777777665444444443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=2.5e-07  Score=55.54  Aligned_cols=34  Identities=29%  Similarity=0.696  Sum_probs=29.5

Q ss_pred             CCCCcCeeccccccccCChHHHHHHHHHhcCCCc
Q psy18077        290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKP  323 (451)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  323 (451)
                      +.++++|.|..|++.|.....|..|+++|++++|
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            3778899999999999999999999999988765

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.40  E-value=2.8e-07  Score=54.44  Aligned_cols=33  Identities=27%  Similarity=0.521  Sum_probs=28.2

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKP  323 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  323 (451)
                      .++++|.|..|++.|.....|..|+++|++++|
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            3 SGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            577889999999999999999999988888764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=3e-07  Score=55.31  Aligned_cols=32  Identities=38%  Similarity=0.655  Sum_probs=28.1

Q ss_pred             CCCCcCeeccc--cccccCChHHHHHHHHHhcCC
Q psy18077        290 SSSEKPFKCKV--CDKAFADKSNLRAHIQTHSKV  321 (451)
Q Consensus       290 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  321 (451)
                      ..+++||.|++  |++.|...+.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            37789999986  999999999999999999875

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.37  E-value=8.7e-08  Score=57.60  Aligned_cols=35  Identities=37%  Similarity=0.719  Sum_probs=24.1

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcCC
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSK  256 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  256 (451)
                      |+++|.++++|.|+.|++.|.....|..|++.|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            45566677777777777777777777777766654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.36  E-value=2.9e-07  Score=54.42  Aligned_cols=33  Identities=33%  Similarity=0.771  Sum_probs=26.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKP  323 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  323 (451)
                      .++++|.|.+|++.|.....|..|+++|++++|
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            3 SGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            567788888888888888888888888877664

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.35  E-value=2e-07  Score=55.19  Aligned_cols=28  Identities=21%  Similarity=0.402  Sum_probs=16.2

Q ss_pred             cccccccccCCChhhHHHHHhhhcCCCC
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRTHTGGTN  451 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~  451 (451)
                      |+|.+|++.|.+...|..|+++|++++|
T Consensus         8 ~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            8 FVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             EECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             eeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5555555555555555556666655554

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.33  E-value=3e-07  Score=62.25  Aligned_cols=39  Identities=26%  Similarity=0.450  Sum_probs=29.6

Q ss_pred             hcCCCCccccc--chhhcCChHhHHHHH-HHcCCCCCeeccc
Q psy18077        226 HTGEKPFKCKV--CDKAFADKSNLRAHI-QTHSKVKPFVCEK  264 (451)
Q Consensus       226 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~  264 (451)
                      ..+++||+|..  |+++|.....|..|+ ++|++++||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            45778888865  888888888888886 5788888887753

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.32  E-value=2.8e-07  Score=54.46  Aligned_cols=34  Identities=26%  Similarity=0.558  Sum_probs=24.0

Q ss_pred             hcCCCCcccccchhhcCChHhHHHHHHHcCCCCC
Q psy18077        226 HTGEKPFKCKVCDKAFADKSNLRAHIQTHSKVKP  259 (451)
Q Consensus       226 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  259 (451)
                      |.++++|.|.+|++.|.....|..|++.|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5566777777777777777777777777766653

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=8.3e-07  Score=52.74  Aligned_cols=33  Identities=45%  Similarity=0.719  Sum_probs=28.2

Q ss_pred             CCCCcCeeccccccccCChHHHHHHHHHhcCCC
Q psy18077        290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      +.++++|.|..|++.|.....|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            367889999999999999999999999988763

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=5.3e-07  Score=54.24  Aligned_cols=28  Identities=21%  Similarity=0.363  Sum_probs=15.5

Q ss_pred             CCCcccCc--cccccCChHHHHHHHHHcCC
Q psy18077        395 TKARTCPQ--CGKLYVSMPAYSMHLRTHNQ  422 (451)
Q Consensus       395 ~~~~~C~~--C~~~f~~~~~l~~H~~~H~~  422 (451)
                      ++||+|++  |++.|.....|..|+++|++
T Consensus         7 ekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            7 GILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            55555554  55555555555555555543

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.26  E-value=5.5e-07  Score=50.87  Aligned_cols=29  Identities=24%  Similarity=0.356  Sum_probs=23.2

Q ss_pred             ccccccccccCCChhhHHHHHhhhcCCCC
Q psy18077        423 ICQCPHCSKSFSRPWLLQGHIRTHTGGTN  451 (451)
Q Consensus       423 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  451 (451)
                      +|.|.+|++.|.....|..|+++|++++|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            47788888888888888888888887765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.26  E-value=7.3e-07  Score=53.78  Aligned_cols=34  Identities=32%  Similarity=0.710  Sum_probs=30.9

Q ss_pred             CCCcCeecc--ccccccCChHHHHHHHHHhcCCCce
Q psy18077        291 SSEKPFKCK--VCDKAFADKSNLRAHIQTHSKVKPF  324 (451)
Q Consensus       291 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  324 (451)
                      +++++|.|.  .|++.|.....|..|+++|++++||
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            578899999  5999999999999999999999887

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.25  E-value=9e-07  Score=52.61  Aligned_cols=33  Identities=55%  Similarity=0.883  Sum_probs=27.0

Q ss_pred             CCCCcCeeccccccccCChHHHHHHHHHhcCCC
Q psy18077        290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      +.++++|.|.+|++.|.....|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            367788888888888888888888888887653

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.25  E-value=6.4e-07  Score=50.19  Aligned_cols=28  Identities=32%  Similarity=0.623  Sum_probs=19.3

Q ss_pred             ccccccccccCCChhhHHHHHhhhcCCC
Q psy18077        423 ICQCPHCSKSFSRPWLLQGHIRTHTGGT  450 (451)
Q Consensus       423 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  450 (451)
                      +|.|++|++.|.+...|..|+++|++++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            4667777777777777777777776654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.24  E-value=4.5e-07  Score=53.69  Aligned_cols=31  Identities=32%  Similarity=0.640  Sum_probs=25.5

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      .+++||.|+.|++.|...+.|..|+       ||.|..
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            6788888888888888888888887       677754

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.23  E-value=5e-07  Score=50.68  Aligned_cols=28  Identities=36%  Similarity=0.552  Sum_probs=20.4

Q ss_pred             ccccccccccCCChhhHHHHHhhhcCCC
Q psy18077        423 ICQCPHCSKSFSRPWLLQGHIRTHTGGT  450 (451)
Q Consensus       423 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  450 (451)
                      +|.|+.|++.|.+...|..|+++|+|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            4677777777777777777777777664

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=1.3e-06  Score=51.93  Aligned_cols=33  Identities=42%  Similarity=0.742  Sum_probs=28.3

Q ss_pred             CCCCcCeeccccccccCChHHHHHHHHHhcCCC
Q psy18077        290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      +.++++|.|..|++.|.....|..|+++|++++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            367789999999999999999999999998764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.22  E-value=5e-07  Score=50.64  Aligned_cols=28  Identities=32%  Similarity=0.669  Sum_probs=20.3

Q ss_pred             ccccccccccCCChhhHHHHHhhhcCCC
Q psy18077        423 ICQCPHCSKSFSRPWLLQGHIRTHTGGT  450 (451)
Q Consensus       423 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  450 (451)
                      +|.|.+|++.|.....|..|+++|+|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            4677777777777777777777777664

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=1.4e-06  Score=51.71  Aligned_cols=33  Identities=33%  Similarity=0.568  Sum_probs=28.1

Q ss_pred             CCCCcCeeccccccccCChHHHHHHHHHhcCCC
Q psy18077        290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      +.++++|.|.+|++.|.....|..|+++|++++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            367888999999999999999999999988764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=8.7e-07  Score=52.68  Aligned_cols=31  Identities=23%  Similarity=0.598  Sum_probs=24.0

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKV  321 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (451)
                      .++++|.|.+|++.|.....|..|+++|+++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            5 SSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            5677788888888888888888888777765

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.20  E-value=6e-08  Score=56.25  Aligned_cols=29  Identities=34%  Similarity=0.494  Sum_probs=23.0

Q ss_pred             ccccccccccCCChhhHHHHHhhhcCCCC
Q psy18077        423 ICQCPHCSKSFSRPWLLQGHIRTHTGGTN  451 (451)
Q Consensus       423 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  451 (451)
                      +|+|.+|++.|.+...|..|+++|++++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            47788888888888888888888888775

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=1.3e-06  Score=52.30  Aligned_cols=33  Identities=42%  Similarity=0.695  Sum_probs=27.6

Q ss_pred             CCCCcCeeccccccccCCh-HHHHHHHHHhcCCC
Q psy18077        290 SSSEKPFKCKVCDKAFADK-SNLRAHIQTHSKVK  322 (451)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~~  322 (451)
                      +.++++|.|..|++.|... ..|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            3678889999999999988 89999998888753

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=4.3e-07  Score=54.52  Aligned_cols=28  Identities=18%  Similarity=0.387  Sum_probs=18.5

Q ss_pred             CCCcccCccccccCChHHHHHH-HHHcCC
Q psy18077        395 TKARTCPQCGKLYVSMPAYSMH-LRTHNQ  422 (451)
Q Consensus       395 ~~~~~C~~C~~~f~~~~~l~~H-~~~H~~  422 (451)
                      ++||+|..|++.|.....|..| +++|++
T Consensus         7 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            7 GHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            5666666666666666666666 666654

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.19  E-value=8.2e-07  Score=49.65  Aligned_cols=28  Identities=32%  Similarity=0.718  Sum_probs=21.4

Q ss_pred             ccccccccccCCChhhHHHHHhhhcCCC
Q psy18077        423 ICQCPHCSKSFSRPWLLQGHIRTHTGGT  450 (451)
Q Consensus       423 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  450 (451)
                      +|.|+.|++.|.+...|..|+++|++++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            4677788888888888888888877764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.18  E-value=1.1e-06  Score=50.28  Aligned_cols=28  Identities=46%  Similarity=0.675  Sum_probs=20.8

Q ss_pred             ccccc--cccccCCChhhHHHHHhhhcCCC
Q psy18077        423 ICQCP--HCSKSFSRPWLLQGHIRTHTGGT  450 (451)
Q Consensus       423 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  450 (451)
                      +|.|+  .|++.|.+...|..|+++|+|++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            46776  77777777777777777777764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.15  E-value=9.8e-07  Score=49.79  Aligned_cols=28  Identities=36%  Similarity=0.579  Sum_probs=16.9

Q ss_pred             ccccccccccCCChhhHHHHHhhhcCCC
Q psy18077        423 ICQCPHCSKSFSRPWLLQGHIRTHTGGT  450 (451)
Q Consensus       423 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  450 (451)
                      +|.|.+|++.|.....|..|+++|+|++
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            3556666666666666666666666553

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=6.1e-07  Score=53.75  Aligned_cols=27  Identities=22%  Similarity=0.569  Sum_probs=14.2

Q ss_pred             CCCcccCccccccCCh-HHHHHHHHHcC
Q psy18077        395 TKARTCPQCGKLYVSM-PAYSMHLRTHN  421 (451)
Q Consensus       395 ~~~~~C~~C~~~f~~~-~~l~~H~~~H~  421 (451)
                      ++||.|..|++.|... ..|..|+++|+
T Consensus         7 ~k~~~C~~C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            7 GRAMKCPYCDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             CCCEECSSSSCEECSSCHHHHHHHHHHH
T ss_pred             CCCeECCCCChhhccCHHHHHHHHHhcC
Confidence            4555555555555555 55555555443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.14  E-value=1e-06  Score=52.11  Aligned_cols=30  Identities=23%  Similarity=0.482  Sum_probs=21.7

Q ss_pred             CCCCcccCccccccCChHHHHHHHHHcCCcccccc
Q psy18077        394 DTKARTCPQCGKLYVSMPAYSMHLRTHNQICQCPH  428 (451)
Q Consensus       394 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~  428 (451)
                      +++||.|+.|+++|.....|..|+     +|.|..
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~-----py~C~~   34 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ-----AYYCSH   34 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH-----HHTSTT
T ss_pred             CccCeECCCCCCccCCHhHccCcC-----CeECcC
Confidence            367777777777777777777777     566653

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=7.3e-07  Score=53.04  Aligned_cols=27  Identities=15%  Similarity=0.289  Sum_probs=14.6

Q ss_pred             CCCcccCccccccCChHHHHHHHHHcC
Q psy18077        395 TKARTCPQCGKLYVSMPAYSMHLRTHN  421 (451)
Q Consensus       395 ~~~~~C~~C~~~f~~~~~l~~H~~~H~  421 (451)
                      ++||.|.+|++.|.....|..|+++|+
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elv_A            7 GLLYDCHICERKFKNELDRDRHMLVHG   33 (36)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHhc
Confidence            455555555555555555555555544

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.43  E-value=2.9e-07  Score=51.74  Aligned_cols=28  Identities=43%  Similarity=0.855  Sum_probs=19.9

Q ss_pred             ccccccccccCCChhhHHHHHhhhcCCC
Q psy18077        423 ICQCPHCSKSFSRPWLLQGHIRTHTGGT  450 (451)
Q Consensus       423 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  450 (451)
                      +|.|.+|++.|.+...|..|+++|+|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            4667777777777777777777777654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.13  E-value=1.3e-06  Score=51.79  Aligned_cols=27  Identities=30%  Similarity=0.492  Sum_probs=14.5

Q ss_pred             CCCcccCccccccCChHHHHHHHHHcC
Q psy18077        395 TKARTCPQCGKLYVSMPAYSMHLRTHN  421 (451)
Q Consensus       395 ~~~~~C~~C~~~f~~~~~l~~H~~~H~  421 (451)
                      +++|.|.+|++.|.....|..|+++|+
T Consensus         7 ~~~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            7 GKTHLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCCeecCcCCCCcCchHHHHHHHHHhc
Confidence            455555555555555555555555554

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.13  E-value=1.5e-06  Score=47.76  Aligned_cols=25  Identities=36%  Similarity=0.606  Sum_probs=12.7

Q ss_pred             CCcccCccccccCChHHHHHHHHHc
Q psy18077        396 KARTCPQCGKLYVSMPAYSMHLRTH  420 (451)
Q Consensus       396 ~~~~C~~C~~~f~~~~~l~~H~~~H  420 (451)
                      +||.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            3455555555555555555555544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.12  E-value=1.5e-06  Score=47.74  Aligned_cols=26  Identities=31%  Similarity=0.572  Sum_probs=18.2

Q ss_pred             cccccccccCCChhhHHHHHhhhcCC
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRTHTGG  449 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~h~~~  449 (451)
                      |+|.+|++.|.+...|..|+++|+|+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            56777777777777777777777653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=1.6e-06  Score=51.53  Aligned_cols=27  Identities=22%  Similarity=0.362  Sum_probs=14.5

Q ss_pred             CCCcccCccccccCChHHHHHHHHHcC
Q psy18077        395 TKARTCPQCGKLYVSMPAYSMHLRTHN  421 (451)
Q Consensus       395 ~~~~~C~~C~~~f~~~~~l~~H~~~H~  421 (451)
                      ++||.|.+|++.|.....|..|+++|+
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            7 GKPFKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             CCSEECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            455555555555555555555555554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=1.3e-06  Score=51.78  Aligned_cols=32  Identities=38%  Similarity=0.664  Sum_probs=22.2

Q ss_pred             hcCCCCcccccchhhcCChHhHHHHHHHcCCC
Q psy18077        226 HTGEKPFKCKVCDKAFADKSNLRAHIQTHSKV  257 (451)
Q Consensus       226 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  257 (451)
                      |.++++|.|.+|++.|.....|..|++.|.++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            55666777777777777777777777766654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.09  E-value=2.1e-06  Score=49.33  Aligned_cols=28  Identities=29%  Similarity=0.497  Sum_probs=19.0

Q ss_pred             ccccc--cccccCCChhhHHHHHhhhcCCC
Q psy18077        423 ICQCP--HCSKSFSRPWLLQGHIRTHTGGT  450 (451)
Q Consensus       423 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  450 (451)
                      +|.|.  .|++.|.+...|..|+++|+|++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            46666  67777777777777777776654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.09  E-value=1.6e-06  Score=48.11  Aligned_cols=24  Identities=29%  Similarity=0.624  Sum_probs=9.8

Q ss_pred             CcccCccccccCChHHHHHHHHHc
Q psy18077        397 ARTCPQCGKLYVSMPAYSMHLRTH  420 (451)
Q Consensus       397 ~~~C~~C~~~f~~~~~l~~H~~~H  420 (451)
                      ||.|..|++.|.....|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTTS
T ss_pred             CccCCCCCcccCCHHHHHHHHHhc
Confidence            344444444444444444444333

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.08  E-value=1.3e-06  Score=52.67  Aligned_cols=35  Identities=29%  Similarity=0.667  Sum_probs=24.0

Q ss_pred             hcCCCCcccc--cchhhcCChHhHHHHHHHcCCCCCe
Q psy18077        226 HTGEKPFKCK--VCDKAFADKSNLRAHIQTHSKVKPF  260 (451)
Q Consensus       226 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  260 (451)
                      |+++++|.|.  .|++.|.....|..|++.|.+++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4566677777  4777777777777777777766654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.08  E-value=1.3e-06  Score=48.11  Aligned_cols=24  Identities=29%  Similarity=0.602  Sum_probs=10.6

Q ss_pred             CcccCccccccCChHHHHHHHHHc
Q psy18077        397 ARTCPQCGKLYVSMPAYSMHLRTH  420 (451)
Q Consensus       397 ~~~C~~C~~~f~~~~~l~~H~~~H  420 (451)
                      ||.|..|++.|.....|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHhc
Confidence            444444444444444444444433

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.07  E-value=1.1e-07  Score=55.03  Aligned_cols=30  Identities=33%  Similarity=0.593  Sum_probs=18.9

Q ss_pred             CeeccccccccCChHHHHHHHHHhcCCCce
Q psy18077        295 PFKCKVCDKAFADKSNLRAHIQTHSKVKPF  324 (451)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  324 (451)
                      ||.|..|++.|...+.|..|+++|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            566666666666666666666666666654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.06  E-value=2.6e-06  Score=47.91  Aligned_cols=29  Identities=34%  Similarity=0.848  Sum_probs=22.6

Q ss_pred             cCeeccccccccCChHHHHHHHHHhcCCC
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      ++|.|..|++.|.....|..|+++|++++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            57888888888888888888888877653

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.06  E-value=4.1e-06  Score=57.23  Aligned_cols=28  Identities=25%  Similarity=0.525  Sum_probs=16.3

Q ss_pred             ccccccccccccCCChHHHHHHHHhccC
Q psy18077        364 TISFQCRDCGKHYSTSSNLARHRQIHRS  391 (451)
Q Consensus       364 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~  391 (451)
                      .++|.|..|++.|.+.+.|..|+++|++
T Consensus        11 ekpy~C~~CgK~F~~~s~L~~H~r~Htg   38 (66)
T 2epp_A           11 AGILPCGLCGKVFTDANRLRQHEAQHGV   38 (66)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ccCcCCCCCCCccCCHHHHHhhhhhhCC
Confidence            3456666666666666666666666554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.05  E-value=3.4e-06  Score=50.41  Aligned_cols=32  Identities=31%  Similarity=0.701  Sum_probs=27.5

Q ss_pred             CCCcCeeccc--cccccCChHHHHHHHHHhcCCC
Q psy18077        291 SSEKPFKCKV--CDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       291 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      +++++|.|.+  |++.|...+.|..|+++|++++
T Consensus         4 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            6788999985  9999999999999999998764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=3e-06  Score=50.70  Aligned_cols=31  Identities=35%  Similarity=0.598  Sum_probs=22.9

Q ss_pred             CCCcCeeccccccccCChHHHHHH-HHHhcCC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAH-IQTHSKV  321 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  321 (451)
                      .+++||.|..|++.|.....|..| +++|+++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            5 SSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            567777777777777777777777 7777653

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.04  E-value=2.4e-06  Score=48.19  Aligned_cols=28  Identities=32%  Similarity=0.647  Sum_probs=20.8

Q ss_pred             ccccccccccCCChhhHHHH-HhhhcCCC
Q psy18077        423 ICQCPHCSKSFSRPWLLQGH-IRTHTGGT  450 (451)
Q Consensus       423 ~~~C~~C~~~f~~~~~l~~H-~~~h~~~~  450 (451)
                      +|.|..|++.|.+...|..| +++|+|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            46777777777777778778 57777764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.04  E-value=3.5e-06  Score=46.98  Aligned_cols=29  Identities=38%  Similarity=0.886  Sum_probs=23.5

Q ss_pred             cCeeccccccccCChHHHHHHHHHhcCCC
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            46888888888888888888888887653

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.30  E-value=6.3e-07  Score=50.69  Aligned_cols=28  Identities=43%  Similarity=0.814  Sum_probs=17.8

Q ss_pred             ccccccccccCCChhhHHHHHhhhcCCC
Q psy18077        423 ICQCPHCSKSFSRPWLLQGHIRTHTGGT  450 (451)
Q Consensus       423 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  450 (451)
                      +|.|.+|++.|.+...|..|+++|++++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            3566666666666666666666666553

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.03  E-value=2.5e-06  Score=47.68  Aligned_cols=28  Identities=32%  Similarity=0.585  Sum_probs=21.1

Q ss_pred             cCeeccccccccCChHHHHHHHHHhcCC
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHSKV  321 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (451)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            4677777777777777777777777765

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.03  E-value=2e-06  Score=47.67  Aligned_cols=27  Identities=37%  Similarity=0.690  Sum_probs=25.2

Q ss_pred             CccccccccccCCChhhHHHHHhhhcC
Q psy18077        422 QICQCPHCSKSFSRPWLLQGHIRTHTG  448 (451)
Q Consensus       422 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  448 (451)
                      ++|.|++|++.|.+...|..|+++|+|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            468999999999999999999999985

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.02  E-value=2.5e-06  Score=54.48  Aligned_cols=28  Identities=36%  Similarity=0.660  Sum_probs=17.2

Q ss_pred             CCCcccCccccccCChHHHHHHHH-HcCC
Q psy18077        395 TKARTCPQCGKLYVSMPAYSMHLR-THNQ  422 (451)
Q Consensus       395 ~~~~~C~~C~~~f~~~~~l~~H~~-~H~~  422 (451)
                      ++||.|.+|++.|.....|..|++ +|++
T Consensus         5 ~kp~~C~~C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            5 DKPYACDICGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             TSCEECTTTCCEESSHHHHHHHHHHSSCC
T ss_pred             CcCEECCCcCcccCCHHHHHHHhhhhcCC
Confidence            566666666666666666666666 5554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.02  E-value=3.7e-06  Score=46.88  Aligned_cols=29  Identities=41%  Similarity=0.858  Sum_probs=24.4

Q ss_pred             cCeeccccccccCChHHHHHHHHHhcCCC
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      ++|.|..|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47889999999999999999998888764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.01  E-value=3e-06  Score=54.15  Aligned_cols=32  Identities=25%  Similarity=0.721  Sum_probs=21.5

Q ss_pred             CCCcCeeccccccccCChHHHHHHHH-HhcCCC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQ-THSKVK  322 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~  322 (451)
                      +++++|.|.+|++.|.....|..|++ +|+++.
T Consensus         3 t~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            3 DRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             TTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            56677777777777777777777777 666653

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=3e-06  Score=50.25  Aligned_cols=32  Identities=34%  Similarity=0.688  Sum_probs=20.8

Q ss_pred             hcCCCCcccccchhhcCChHhHHHHHHHcCCC
Q psy18077        226 HTGEKPFKCKVCDKAFADKSNLRAHIQTHSKV  257 (451)
Q Consensus       226 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  257 (451)
                      |.++++|.|..|++.|.....|..|+++|.++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            45566666666666666666666666666554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.98  E-value=4.5e-06  Score=46.90  Aligned_cols=30  Identities=37%  Similarity=0.702  Sum_probs=24.3

Q ss_pred             cCeeccccccccCChHHHHHHHHHhcCCCc
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHSKVKP  323 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  323 (451)
                      ++|.|..|++.|.....|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            468888888888888888888888887653

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.98  E-value=4.3e-06  Score=45.86  Aligned_cols=26  Identities=38%  Similarity=0.824  Sum_probs=18.8

Q ss_pred             cCeeccccccccCChHHHHHHHHHhc
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHS  319 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~  319 (451)
                      +||.|..|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            56777777777777777777777663

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.94  E-value=4.5e-06  Score=46.46  Aligned_cols=29  Identities=41%  Similarity=0.717  Sum_probs=23.6

Q ss_pred             cCeeccccccccCChHHHHHHHHHhcCCC
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            46888888888888888888888887753

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.93  E-value=4.6e-06  Score=45.65  Aligned_cols=25  Identities=28%  Similarity=0.846  Sum_probs=14.5

Q ss_pred             ccccccccccCCChHHHHHHHHhcc
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQIHR  390 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~H~  390 (451)
                      +|.|..|++.|.+.+.|..|+++|+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcC
Confidence            3556666666666666666665554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.92  E-value=5.7e-06  Score=47.44  Aligned_cols=29  Identities=34%  Similarity=0.791  Sum_probs=21.7

Q ss_pred             cCeecc--ccccccCChHHHHHHHHHhcCCC
Q psy18077        294 KPFKCK--VCDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       294 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      +||.|.  .|++.|.....|..|+++|++++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            577777  68888887778888877777653

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.92  E-value=3.6e-06  Score=46.22  Aligned_cols=25  Identities=24%  Similarity=0.806  Sum_probs=14.5

Q ss_pred             cCeeccccccccCChHHHHHHHHHh
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTH  318 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h  318 (451)
                      +||.|..|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4555666666666666666655544

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.15  E-value=1.4e-06  Score=47.39  Aligned_cols=20  Identities=30%  Similarity=0.750  Sum_probs=7.3

Q ss_pred             cccCccccccCChHHHHHHH
Q psy18077        398 RTCPQCGKLYVSMPAYSMHL  417 (451)
Q Consensus       398 ~~C~~C~~~f~~~~~l~~H~  417 (451)
                      |.|..|++.|.....|..|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~   22 (26)
T 2lvu_A            3 YVCERCGKRFVQSSQLANHI   22 (26)
Confidence            33333333333333333333

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.90  E-value=5.5e-06  Score=47.12  Aligned_cols=28  Identities=36%  Similarity=0.794  Sum_probs=20.4

Q ss_pred             cCeecc--ccccccCChHHHHHHHHHhcCC
Q psy18077        294 KPFKCK--VCDKAFADKSNLRAHIQTHSKV  321 (451)
Q Consensus       294 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  321 (451)
                      +||.|.  .|++.|...+.|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            367776  7777777777777777777765

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.90  E-value=7.2e-07  Score=56.82  Aligned_cols=27  Identities=26%  Similarity=0.404  Sum_probs=13.6

Q ss_pred             CCCcccC--ccccccCChHHHHHHHHHcC
Q psy18077        395 TKARTCP--QCGKLYVSMPAYSMHLRTHN  421 (451)
Q Consensus       395 ~~~~~C~--~C~~~f~~~~~l~~H~~~H~  421 (451)
                      ++||.|.  .|++.|.....|..|+++|+
T Consensus        16 ~k~~~C~~~~C~k~F~~~~~L~~H~~~H~   44 (47)
T 1ncs_A           16 DKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             TTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             CCCeECCCCCCCCccCCHHHHHHHHHHcc
Confidence            4555553  35555555555555555444

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.12  E-value=1.6e-06  Score=48.52  Aligned_cols=28  Identities=43%  Similarity=0.838  Sum_probs=19.3

Q ss_pred             cCeeccccccccCChHHHHHHHHHhcCC
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHSKV  321 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (451)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3567777777777777777777776654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.11  E-value=1.7e-06  Score=47.02  Aligned_cols=26  Identities=35%  Similarity=0.654  Sum_probs=23.9

Q ss_pred             CccccccccccCCChhhHHHHHhhhc
Q psy18077        422 QICQCPHCSKSFSRPWLLQGHIRTHT  447 (451)
Q Consensus       422 ~~~~C~~C~~~f~~~~~l~~H~~~h~  447 (451)
                      ++|.|++|++.|.+...|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            35899999999999999999999985

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.87  E-value=1.1e-05  Score=55.13  Aligned_cols=41  Identities=22%  Similarity=0.369  Sum_probs=33.1

Q ss_pred             CCCCcCeeccccccccCChHHHHHHHHHhcCCCceecccCcc
Q psy18077        290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGK  331 (451)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  331 (451)
                      ..+++||.|..|++.|.....|..|+++|++.. ..+.+++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~~   48 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYIDL   48 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-cccccccC
Confidence            367899999999999999999999999998864 34555443

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.08  E-value=2e-06  Score=48.49  Aligned_cols=28  Identities=36%  Similarity=0.827  Sum_probs=19.6

Q ss_pred             cCeeccccccccCChHHHHHHHHHhcCC
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHSKV  321 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (451)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4677777777777777777777776654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.84  E-value=6.6e-06  Score=49.12  Aligned_cols=32  Identities=31%  Similarity=0.634  Sum_probs=20.9

Q ss_pred             hcCCCCccccc--chhhcCChHhHHHHHHHcCCC
Q psy18077        226 HTGEKPFKCKV--CDKAFADKSNLRAHIQTHSKV  257 (451)
Q Consensus       226 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  257 (451)
                      |.++++|.|.+  |++.|.....|..|+++|.++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45666677763  777777777777776666554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.82  E-value=3.5e-06  Score=53.54  Aligned_cols=32  Identities=41%  Similarity=0.773  Sum_probs=24.8

Q ss_pred             CCCcCeecc--ccccccCChHHHHHHHHHhcCCC
Q psy18077        291 SSEKPFKCK--VCDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       291 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      .++++|.|.  .|++.|...+.|..|+++|++++
T Consensus        14 ~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           14 MPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             ETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             CCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            667888885  58888888888888888887753

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.71  E-value=1.4e-05  Score=44.40  Aligned_cols=24  Identities=33%  Similarity=0.661  Sum_probs=12.4

Q ss_pred             cccc--cccccCCChhhHHHHHhhhc
Q psy18077        424 CQCP--HCSKSFSRPWLLQGHIRTHT  447 (451)
Q Consensus       424 ~~C~--~C~~~f~~~~~l~~H~~~h~  447 (451)
                      |.|.  .|++.|.+...|..|+++|+
T Consensus         3 ~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            3 YVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             EEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            4455  55555555555555555554

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.71  E-value=1.1e-05  Score=45.31  Aligned_cols=27  Identities=30%  Similarity=0.672  Sum_probs=16.5

Q ss_pred             CeeccccccccCChHHHHHH-HHHhcCC
Q psy18077        295 PFKCKVCDKAFADKSNLRAH-IQTHSKV  321 (451)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H-~~~h~~~  321 (451)
                      ||.|..|++.|.....|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            56666666666666666666 4555554

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.66  E-value=2.1e-05  Score=43.64  Aligned_cols=25  Identities=20%  Similarity=0.537  Sum_probs=12.1

Q ss_pred             CcccC--ccccccCChHHHHHHHHHcC
Q psy18077        397 ARTCP--QCGKLYVSMPAYSMHLRTHN  421 (451)
Q Consensus       397 ~~~C~--~C~~~f~~~~~l~~H~~~H~  421 (451)
                      +|.|.  .|++.|.....|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            34444  45555555445555544443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.56  E-value=0.00015  Score=49.16  Aligned_cols=54  Identities=24%  Similarity=0.461  Sum_probs=38.8

Q ss_pred             cccc--cccccCCChHHHHHHH-HhccCCC---CCCCcccC--ccccccCChHHHHHHHHHc
Q psy18077        367 FQCR--DCGKHYSTSSNLARHR-QIHRSPD---DTKARTCP--QCGKLYVSMPAYSMHLRTH  420 (451)
Q Consensus       367 ~~C~--~C~~~f~~~~~L~~H~-~~H~~~~---~~~~~~C~--~C~~~f~~~~~l~~H~~~H  420 (451)
                      |.|.  .|++.|.+...|..|+ +.|.+..   ...+|.|.  .|++.+.....|..|+++.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            3454  4889999999999998 4676532   22378886  7888877777788887764

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.08  E-value=0.00083  Score=45.41  Aligned_cols=48  Identities=29%  Similarity=0.540  Sum_probs=30.1

Q ss_pred             CcCccccCCHHHHHHHHH-HhcCCC------Ccccc--cchhhcCChHhHHHHHHHc
Q psy18077        207 PHCSKSFSRPWLLQGHIR-THTGEK------PFKCK--VCDKAFADKSNLRAHIQTH  254 (451)
Q Consensus       207 ~~C~~~f~~~~~L~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h  254 (451)
                      ..|++.|.+...|..|+. .|.+.+      +|.|.  -|++.+.....|..|++..
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            346777777777777763 565544      56665  4666666666666666653

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.74  E-value=0.0015  Score=54.18  Aligned_cols=78  Identities=17%  Similarity=0.316  Sum_probs=56.9

Q ss_pred             cccc--ccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHc--CCccccccccccCCChhhHHH
Q psy18077        366 SFQC--RDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH--NQICQCPHCSKSFSRPWLLQG  441 (451)
Q Consensus       366 ~~~C--~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~  441 (451)
                      ...|  ..|+..+. ...|..|+..-.    .++..|+.|+..+ .+..|..|+...  .+.-.|+.|+..|. ...|..
T Consensus        82 ~v~C~n~GC~~~~~-~~~l~~H~~~C~----~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~  154 (170)
T 3hcs_A           82 MVKCPNEGCLHKME-LRHLEDHQAHCE----FALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEI  154 (170)
T ss_dssp             EEECCSTTCCCEEE-GGGHHHHHTTCT----TSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHH
T ss_pred             ccCCCCCCCCceec-HhHHHHHHhcCC----ceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHh
Confidence            4677  46887665 567888875432    5778999999887 677899998654  23467999998875 467899


Q ss_pred             HHhhhcCCC
Q psy18077        442 HIRTHTGGT  450 (451)
Q Consensus       442 H~~~h~~~~  450 (451)
                      |..++.|+.
T Consensus       155 H~~~~~~~~  163 (170)
T 3hcs_A          155 HDQNCPLAL  163 (170)
T ss_dssp             HHTTCCC--
T ss_pred             HHHhCcChh
Confidence            999998875

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.49  E-value=0.0023  Score=49.98  Aligned_cols=75  Identities=20%  Similarity=0.344  Sum_probs=47.8

Q ss_pred             cccccccccccCCChHHHHHHH--HhccCCCCCCCcccCcc------ccccCChHHHHHHHHHcC--CccccccccccCC
Q psy18077        365 ISFQCRDCGKHYSTSSNLARHR--QIHRSPDDTKARTCPQC------GKLYVSMPAYSMHLRTHN--QICQCPHCSKSFS  434 (451)
Q Consensus       365 ~~~~C~~C~~~f~~~~~L~~H~--~~H~~~~~~~~~~C~~C------~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~  434 (451)
                      .++.|.+|+..|.+.+.+..|.  +.|..  ..+.|.+..+      ++.+....    +...+.  +.|-|.+|++.|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~--~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~  104 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHAN--KVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFS  104 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHH--HHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECS
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHH--HHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeC
Confidence            3688999999999999999998  56643  1223333111      12222111    111122  2388999999999


Q ss_pred             ChhhHHHHHhh
Q psy18077        435 RPWLLQGHIRT  445 (451)
Q Consensus       435 ~~~~l~~H~~~  445 (451)
                      +...|..|+..
T Consensus       105 s~~~~~~H~~g  115 (127)
T 1zu1_A          105 SPVVAESHYIG  115 (127)
T ss_dssp             SHHHHHHHHTS
T ss_pred             CHHHHHHHHCC
Confidence            99999999853

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.33  E-value=0.002  Score=50.38  Aligned_cols=25  Identities=20%  Similarity=0.506  Sum_probs=22.5

Q ss_pred             CCCCcccCccccccCChHHHHHHHH
Q psy18077        394 DTKARTCPQCGKLYVSMPAYSMHLR  418 (451)
Q Consensus       394 ~~~~~~C~~C~~~f~~~~~l~~H~~  418 (451)
                      +.+.|.|.+|+..|.+...|..|+.
T Consensus        90 ~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           90 EDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             CCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             CCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            3678999999999999999999985

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.31  E-value=0.0043  Score=47.49  Aligned_cols=28  Identities=18%  Similarity=0.188  Sum_probs=21.6

Q ss_pred             HhcCCCceecccCcccccChhhHHhccc
Q psy18077        317 THSKVKPFVCEKCGKAFALKSYLYKHED  344 (451)
Q Consensus       317 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~  344 (451)
                      .|+|++||.|..|++.|.+...|..|++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            4667777888888888888888888876

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.23  E-value=0.012  Score=35.66  Aligned_cols=23  Identities=22%  Similarity=0.540  Sum_probs=12.1

Q ss_pred             CCcccCccccccCChHHHHHHHH
Q psy18077        396 KARTCPQCGKLYVSMPAYSMHLR  418 (451)
Q Consensus       396 ~~~~C~~C~~~f~~~~~l~~H~~  418 (451)
                      .+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            34555555555555555555554

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.15  E-value=0.013  Score=35.64  Aligned_cols=25  Identities=16%  Similarity=0.291  Sum_probs=22.7

Q ss_pred             cccccccccccCCChHHHHHHHHhc
Q psy18077        365 ISFQCRDCGKHYSTSSNLARHRQIH  389 (451)
Q Consensus       365 ~~~~C~~C~~~f~~~~~L~~H~~~H  389 (451)
                      .+|.|+.|+..|.....|+.||+.-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            5799999999999999999999743

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.73  E-value=0.0068  Score=46.38  Aligned_cols=24  Identities=17%  Similarity=0.556  Sum_probs=14.8

Q ss_pred             CCCcccCccccccCChHHHHHHHH
Q psy18077        395 TKARTCPQCGKLYVSMPAYSMHLR  418 (451)
Q Consensus       395 ~~~~~C~~C~~~f~~~~~l~~H~~  418 (451)
                      +++|.|..|++.|.+...|..|++
T Consensus        48 ekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           48 GGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CcceEcccCcchhCCHHHHHHHHh
Confidence            556666666666666666666654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.10  E-value=0.043  Score=45.23  Aligned_cols=77  Identities=19%  Similarity=0.352  Sum_probs=42.1

Q ss_pred             cchhhcCChHhHHHHHHHcCCCCCeecccccccccChHHHHhchhhcCCCCcCCCCCCcCeeccccccccCChHHHHHHH
Q psy18077        236 VCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHI  315 (451)
Q Consensus       236 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~  315 (451)
                      -|+..+. ...|..|+. .-.-++..|+.|+..+ ....|..|+...|        ..++..|..|+..+.. ..|..|.
T Consensus        89 GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C--------~~r~~~C~~C~~~~~~-~~l~~H~  156 (170)
T 3hcs_A           89 GCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDC--------PRRQVSCDNCAASMAF-EDKEIHD  156 (170)
T ss_dssp             TCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTC--------TTCEEECTTTCCEEEG-GGHHHHH
T ss_pred             CCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhC--------CCCCeECCCCCCccCH-HHHHhHH
Confidence            3554433 445566652 2334556677777666 4555666765443        2355667777776643 4567777


Q ss_pred             HHhcCCCce
Q psy18077        316 QTHSKVKPF  324 (451)
Q Consensus       316 ~~h~~~~~~  324 (451)
                      .++.|..++
T Consensus       157 ~~~~~~~~~  165 (170)
T 3hcs_A          157 QNCPLALEH  165 (170)
T ss_dssp             TTCCC----
T ss_pred             HhCcChhhh
Confidence            776666543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=92.29  E-value=0.086  Score=29.95  Aligned_cols=21  Identities=33%  Similarity=0.534  Sum_probs=10.6

Q ss_pred             cccccccccCCChhhHHHHHh
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIR  444 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~  444 (451)
                      |.|++|-+.|.+...|..|..
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye   26 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYE   26 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHH
T ss_pred             cCCcHHHHHcCCHHHHHHHHH
Confidence            445555555555555555543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=90.96  E-value=0.13  Score=29.17  Aligned_cols=25  Identities=24%  Similarity=0.541  Sum_probs=21.3

Q ss_pred             ccccccccccCCChHHHHHHHHhcc
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQIHR  390 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~H~  390 (451)
                      .|.|++|.+.|.+...|..|....|
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            4889999999999999999986555

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=86.37  E-value=0.58  Score=26.60  Aligned_cols=24  Identities=17%  Similarity=0.436  Sum_probs=17.0

Q ss_pred             CCCcccCccccccCChHHHHHHHH
Q psy18077        395 TKARTCPQCGKLYVSMPAYSMHLR  418 (451)
Q Consensus       395 ~~~~~C~~C~~~f~~~~~l~~H~~  418 (451)
                      ...+.|..|+.+|.+...+..|.+
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhe
Confidence            455677777777777777777754

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=85.11  E-value=0.11  Score=35.36  Aligned_cols=12  Identities=33%  Similarity=0.977  Sum_probs=9.6

Q ss_pred             cccccccccCCC
Q psy18077        424 CQCPHCSKSFSR  435 (451)
Q Consensus       424 ~~C~~C~~~f~~  435 (451)
                      |+||.||..|--
T Consensus        52 FkCP~CgEEFyG   63 (95)
T 2k5c_A           52 FKCPVCGEEFYG   63 (95)
T ss_dssp             EECTTTCCEEET
T ss_pred             hcCCCccHHHhc
Confidence            889999887753

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=84.57  E-value=0.32  Score=34.27  Aligned_cols=21  Identities=38%  Similarity=0.759  Sum_probs=9.4

Q ss_pred             ccccccccCCChhhHHHHHhhhcC
Q psy18077        425 QCPHCSKSFSRPWLLQGHIRTHTG  448 (451)
Q Consensus       425 ~C~~C~~~f~~~~~l~~H~~~h~~  448 (451)
                      .|-+||+.|.   .|+.|+++|||
T Consensus        23 iClecGK~fK---~LkRHL~~~hg   43 (87)
T 2jsp_A           23 VCLECGGSFK---SLKRHLTTHHS   43 (87)
T ss_dssp             ECTBTCCEES---BHHHHHHHTTC
T ss_pred             EecccchhhH---HHHHHHHHccC
Confidence            3444444444   24444444443

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=80.13  E-value=3.2  Score=23.62  Aligned_cols=25  Identities=28%  Similarity=0.333  Sum_probs=16.9

Q ss_pred             CcCeeccccccccCChHHHHHHHHH
Q psy18077        293 EKPFKCKVCDKAFADKSNLRAHIQT  317 (451)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~  317 (451)
                      ...+.|..|+..|.....+..|.+.
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhee
Confidence            4556677777777777777777653

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=80.06  E-value=1.1  Score=24.08  Aligned_cols=22  Identities=23%  Similarity=0.425  Sum_probs=17.6

Q ss_pred             ccccccccccCCChHHHHHHHH
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQ  387 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~  387 (451)
                      .|.|++|....++...|+.|..
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHH
Confidence            3788888888888888888864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	451
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	6e-12
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	6e-06
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	8e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	8e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-11
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-10
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-10
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	6e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.001
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.001
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	7e-10
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-09
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-08
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	6e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-09
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-09
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	9e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-07
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	4e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.001
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.001
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-09
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	3e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-09
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	5e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	5e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.002
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	2e-07
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	4e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.002
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	5e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	5e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	5e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	5e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	7e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	7e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.001
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.001
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	3e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	3e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	5e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	5e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.002
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.002
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	5e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.003
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.003
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.003
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.003
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	5e-05
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	4e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	5e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	5e-05
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	8e-05
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	8e-05
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.002
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.002
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.002
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.002
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	3e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	3e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.001
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.001
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.001
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.004
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.004
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.002
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.002
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.002
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	0.003
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	0.003
d1bboa1	28	g.37.1.1 (A:1-28) Enhancer binding protein {Human	0.004

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.8 bits (140), Expect = 6e-12
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 221 GHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHSKV 257
           G  R  TG KPF+C  CD++F+   +L  H + H  V
Sbjct: 1   GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.5 bits (95), Expect = 6e-06
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKV 321
            KPF+C  CD++F+   +L  H + H  V
Sbjct: 9   IKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.4 bits (87), Expect = 8e-05
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 250 HIQTHSKVKPFVCEKCGKAFALKSYLYKHE 279
             +  + +KPF C  C ++F+   +L  H 
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHR 31

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.4 bits (87), Expect = 8e-05
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
             +  + +KPF C  C ++F+   +L  H 
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHR 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.4 bits (134), Expect = 4e-11
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 224 RTHTGEKPFKCKVCDKAFADKSNLRAHIQTH 254
           RTH+GEKP++C +C   F     ++ HI   
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (103), Expect = 7e-07
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTH 318
           EKP++C +C   F     ++ HI   
Sbjct: 6   EKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (89), Expect = 5e-05
 Identities = 9/27 (33%), Positives = 11/27 (40%)

Query: 253 THSKVKPFVCEKCGKAFALKSYLYKHE 279
           THS  KP+ C  C   F     +  H 
Sbjct: 2   THSGEKPYECYICHARFTQSGTMKMHI 28

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (89), Expect = 5e-05
 Identities = 9/27 (33%), Positives = 11/27 (40%)

Query: 317 THSKVKPFVCEKCGKAFALKSYLYKHE 343
           THS  KP+ C  C   F     +  H 
Sbjct: 2   THSGEKPYECYICHARFTQSGTMKMHI 28

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (127), Expect = 3e-10
 Identities = 16/32 (50%), Positives = 19/32 (59%)

Query: 224 RTHTGEKPFKCKVCDKAFADKSNLRAHIQTHS 255
           RTHTGEKP+ C  CDK F  K  L  H + + 
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (98), Expect = 3e-06
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHS 319
           EKP+ C  CDK F  K  L  H + + 
Sbjct: 6   EKPYACSHCDKTFRQKQLLDMHFKRYH 32

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 1e-04
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 253 THSKVKPFVCEKCGKAFALKSYLYKHE 279
           TH+  KP+ C  C K F  K  L  H 
Sbjct: 2   THTGEKPYACSHCDKTFRQKQLLDMHF 28

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 1e-04
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 317 THSKVKPFVCEKCGKAFALKSYLYKHE 343
           TH+  KP+ C  C K F  K  L  H 
Sbjct: 2   THTGEKPYACSHCDKTFRQKQLLDMHF 28

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.003
 Identities = 6/27 (22%), Positives = 11/27 (40%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPD 173
           + C  C K +     L  H + +  P+
Sbjct: 9   YACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.003
 Identities = 6/27 (22%), Positives = 11/27 (40%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIHRSPD 393
           + C  C K +     L  H + +  P+
Sbjct: 9   YACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.003
 Identities = 8/26 (30%), Positives = 12/26 (46%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEK 230
            C HC K+F +  LL  H + +    
Sbjct: 10  ACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (127), Expect = 4e-10
 Identities = 14/30 (46%), Positives = 19/30 (63%)

Query: 226 HTGEKPFKCKVCDKAFADKSNLRAHIQTHS 255
           H+GEKP+ C  C KAF+  S L  H + H+
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHT 31

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (105), Expect = 3e-07
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHS 319
           EKP+ C  C KAF+  S L  H + H+
Sbjct: 5   EKPYGCVECGKAFSRSSILVQHQRVHT 31

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (89), Expect = 5e-05
 Identities = 13/26 (50%), Positives = 18/26 (69%)

Query: 254 HSKVKPFVCEKCGKAFALKSYLYKHE 279
           HS  KP+ C +CGKAF+  S L +H+
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQ 27

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (89), Expect = 5e-05
 Identities = 13/26 (50%), Positives = 18/26 (69%)

Query: 318 HSKVKPFVCEKCGKAFALKSYLYKHE 343
           HS  KP+ C +CGKAF+  S L +H+
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQ 27

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (89), Expect = 6e-05
 Identities = 13/25 (52%), Positives = 15/25 (60%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGE 229
            C  C K+FSR  +L  H R HTGE
Sbjct: 9   GCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (82), Expect = 5e-04
 Identities = 12/24 (50%), Positives = 14/24 (58%)

Query: 425 QCPHCSKSFSRPWLLQGHIRTHTG 448
            C  C K+FSR  +L  H R HTG
Sbjct: 9   GCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 0.001
 Identities = 10/23 (43%), Positives = 17/23 (73%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIH 169
           + C +CGK +S SS L +H+++H
Sbjct: 8   YGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 0.001
 Identities = 10/23 (43%), Positives = 17/23 (73%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIH 389
           + C +CGK +S SS L +H+++H
Sbjct: 8   YGCVECGKAFSRSSILVQHQRVH 30

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (125), Expect = 7e-10
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 291 SSEKPFKCKVCDKAFADKSNLRAHIQ-THSKVKPFVCE 327
           S  KP+ C+ C K F+   +L  HI+  H+  +P  C+
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (122), Expect = 2e-09
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 227 TGEKPFKCKVCDKAFADKSNLRAHIQ-THSKVKPFVCE 263
           +  KP+ C+ C K F+   +L  HI+  H+  +P  C+
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (116), Expect = 1e-08
 Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 205 QCPHCSKSFSRPWLLQGHIR-THTGEKPFKCKV 236
            C  C K FSRP  L GHI+  HT E+P KC+V
Sbjct: 7   ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (100), Expect = 2e-06
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 255 SKVKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKV 300
           S  KP++C+ CGK F+   +L  H            +SE+P KC+V
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQ-------VHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 6e-04
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 319 SKVKPFVCEKCGKAFALKSYLYKHE 343
           S  KP++C+ CGK F+   +L  H 
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHI 25

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 1e-09
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 229 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 279
           +K + C+ C K+F  KS    H+  H  ++P+ C  CGK F +K +L  H 
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM 50

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 1e-09
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
           +K + C+ C K+F  KS    H+  H  ++P+ C  CGK F +K +L  H 
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM 50

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 9e-08
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 9/61 (14%)

Query: 258 KPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSSEKPFKCKVCDKAFADKSNLRAHIQT 317
           K + C+ CGK+F  KS   +H                 + C VC K F  K +L  H++ 
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRP--------YGCGVCGKKFKMKHHLVGHMKI 52

Query: 318 H 318
           H
Sbjct: 53  H 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 1e-07
 Identities = 17/47 (36%), Positives = 24/47 (51%)

Query: 208 HCSKSFSRPWLLQGHIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTH 254
            C KSF+       H+  H G +P+ C VC K F  K +L  H++ H
Sbjct: 7   QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 4e-06
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 16/68 (23%)

Query: 322 KPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKHYSTSSN 381
           K + C+ CGK+F  KS   +H                        + C  CGK +    +
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRP---------------YGCGVCGKKFKMKHH 45

Query: 382 LARHRQIH 389
           L  H +IH
Sbjct: 46  LVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 0.001
 Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH 200
           + C  CGK ++  S   RH  +H          C  CGK +        H++ H
Sbjct: 4   YPC-QCGKSFTHKSQRDRHMSMHLGLRPYG---CGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 0.001
 Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH 420
           + C  CGK ++  S   RH  +H          C  CGK +        H++ H
Sbjct: 4   YPC-QCGKSFTHKSQRDRHMSMHLGLRPYG---CGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.002
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 182 QCGKLYVSMPAYSMHLRTHN--QICQCPHCSKSFSRPWLLQGHIRTH 226
           QCGK +        H+  H   +   C  C K F     L GH++ H
Sbjct: 7   QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.002
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 402 QCGKLYVSMPAYSMHLRTHN--QICQCPHCSKSFSRPWLLQGHIRTH 446
           QCGK +        H+  H   +   C  C K F     L GH++ H
Sbjct: 7   QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (122), Expect = 2e-09
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 203 ICQCPHCSKSFSRPWLLQGHIRTHTGEKPFKCK 235
            C  P C KSF+    L+ H++ H+  + + C+
Sbjct: 3   SCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 2e-05
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 232 FKCK--VCDKAFADKSNLRAHIQTHSKVKPFVCE 263
           F C    C K+F  K +L+ H++ HS  + ++CE
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 2e-05
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 296 FKCK--VCDKAFADKSNLRAHIQTHSKVKPFVCE 327
           F C    C K+F  K +L+ H++ HS  + ++CE
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (83), Expect = 3e-04
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 423 ICQCPHCSKSFSRPWLLQGHIRTHTG 448
            C  P C KSF+    L+ H++ H+ 
Sbjct: 3   SCPEPACGKSFNFKKHLKEHMKLHSD 28

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (119), Expect = 3e-09
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHS 255
                   + +KC  C K+F+  S+L  H +TH+
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 2e-04
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHS 319
            + +KC  C K+F+  S+L  H +TH+
Sbjct: 10  RRRYKCDECGKSFSHSSDLSKHRRTHT 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 5e-04
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 250 HIQTHSKVKPFVCEKCGKAFALKSYLYKHE 279
                 + + + C++CGK+F+  S L KH 
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHR 32

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 5e-04
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 314 HIQTHSKVKPFVCEKCGKAFALKSYLYKHE 343
                 + + + C++CGK+F+  S L KH 
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHR 32

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.6 bits (77), Expect = 0.002
 Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 196 HLRTHNQI--CQCPHCSKSFSRPWLLQGHIRTHTGE 229
                 +    +C  C KSFS    L  H RTHTGE
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.1 bits (107), Expect = 2e-07
 Identities = 11/30 (36%), Positives = 20/30 (66%)

Query: 226 HTGEKPFKCKVCDKAFADKSNLRAHIQTHS 255
            +G++PF C++C  AF  K+N   H++ H+
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHT 31

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.2 bits (89), Expect = 4e-05
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 290 SSSEKPFKCKVCDKAFADKSNLRAHIQTHS 319
           SS ++PF C++C  AF  K+N   H++ H+
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHT 31

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 6/26 (23%), Positives = 10/26 (38%)

Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGE 229
             C  C  +F+       H++ HT  
Sbjct: 8   FVCRICLSAFTTKANCARHLKVHTDT 33

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.8 bits (104), Expect = 5e-07
 Identities = 11/27 (40%), Positives = 20/27 (74%)

Query: 229 EKPFKCKVCDKAFADKSNLRAHIQTHS 255
           +KPF+C++C + F+   +L  HI+TH+
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHT 27

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.8 bits (104), Expect = 5e-07
 Identities = 11/27 (40%), Positives = 20/27 (74%)

Query: 293 EKPFKCKVCDKAFADKSNLRAHIQTHS 319
           +KPF+C++C + F+   +L  HI+TH+
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHT 27

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.9 bits (81), Expect = 5e-04
 Identities = 14/24 (58%), Positives = 16/24 (66%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTG 228
           QC  C ++FSR   L  HIRTHTG
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.9 bits (81), Expect = 5e-04
 Identities = 14/24 (58%), Positives = 16/24 (66%)

Query: 425 QCPHCSKSFSRPWLLQGHIRTHTG 448
           QC  C ++FSR   L  HIRTHTG
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.9 bits (81), Expect = 7e-04
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 258 KPFVCEKCGKAFALKSYLYKHE 279
           KPF C  C + F+   +L  H 
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHI 23

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.9 bits (81), Expect = 7e-04
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 322 KPFVCEKCGKAFALKSYLYKHE 343
           KPF C  C + F+   +L  H 
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHI 23

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.7 bits (78), Expect = 0.001
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIH 169
           FQCR C +++S S +L  H + H
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTH 26

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.7 bits (78), Expect = 0.001
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIH 389
           FQCR C +++S S +L  H + H
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTH 26

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 41.5 bits (98), Expect = 3e-06
 Identities = 11/29 (37%), Positives = 20/29 (68%)

Query: 230 KPFKCKVCDKAFADKSNLRAHIQTHSKVK 258
           + F C+VC +AFA + +L+ H ++H+  K
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 41.5 bits (98), Expect = 3e-06
 Identities = 11/29 (37%), Positives = 20/29 (68%)

Query: 294 KPFKCKVCDKAFADKSNLRAHIQTHSKVK 322
           + F C+VC +AFA + +L+ H ++H+  K
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 41.1 bits (97), Expect = 4e-06
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEK 230
            C  C+++F+R   L+ H R+HT EK
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 36.1 bits (84), Expect = 2e-04
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 425 QCPHCSKSFSRPWLLQGHIRTHTG 448
            C  C+++F+R   L+ H R+HT 
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTN 27

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 35.3 bits (82), Expect = 5e-04
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 258 KPFVCEKCGKAFALKSYLYKHE 279
           + FVCE C +AFA + +L +H 
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHY 22

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 35.3 bits (82), Expect = 5e-04
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 322 KPFVCEKCGKAFALKSYLYKHE 343
           + FVCE C +AFA + +L +H 
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHY 22

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 7/23 (30%), Positives = 12/23 (52%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIH 169
           F C  C + ++   +L RH + H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSH 25

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 7/23 (30%), Positives = 12/23 (52%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIH 389
           F C  C + ++   +L RH + H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSH 25

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 1e-05
 Identities = 15/28 (53%), Positives = 18/28 (64%)

Query: 203 ICQCPHCSKSFSRPWLLQGHIRTHTGEK 230
           +C   +C K F+R   LQ H RTHTGEK
Sbjct: 4   MCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 3e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 230 KPFKCKV--CDKAFADKSNLRAHIQTHSKVK 258
           +PF C    C K F     L+ H +TH+  K
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 3e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 294 KPFKCKV--CDKAFADKSNLRAHIQTHSKVK 322
           +PF C    C K F     L+ H +TH+  K
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 5e-04
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 423 ICQCPHCSKSFSRPWLLQGHIRTHTG 448
           +C   +C K F+R   LQ H RTHTG
Sbjct: 4   MCTWSYCGKRFTRSDELQRHKRTHTG 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 2e-05
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 230 KPFKCKVCDKAFADKSNLRAHIQTHSKVK 258
           K F C  C K F    +L  HI+TH   K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 2e-05
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 294 KPFKCKVCDKAFADKSNLRAHIQTHSKVK 322
           K F C  C K F    +L  HI+TH   K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (91), Expect = 3e-05
 Identities = 12/26 (46%), Positives = 14/26 (53%)

Query: 205 QCPHCSKSFSRPWLLQGHIRTHTGEK 230
            CP C K F R   L  HI+TH  +K
Sbjct: 4   ACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.001
 Identities = 11/24 (45%), Positives = 12/24 (50%)

Query: 425 QCPHCSKSFSRPWLLQGHIRTHTG 448
            CP C K F R   L  HI+TH  
Sbjct: 4   ACPECPKRFMRSDHLSKHIKTHQN 27

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.003
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIH 169
           F C +C K +  S +L++H + H
Sbjct: 3   FACPECPKRFMRSDHLSKHIKTH 25

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.003
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIH 389
           F C +C K +  S +L++H + H
Sbjct: 3   FACPECPKRFMRSDHLSKHIKTH 25

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.003
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query: 258 KPFVCEKCGKAFALKSYLYKHE 279
           K F C +C K F    +L KH 
Sbjct: 1   KKFACPECPKRFMRSDHLSKHI 22

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.003
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query: 322 KPFVCEKCGKAFALKSYLYKHE 343
           K F C +C K F    +L KH 
Sbjct: 1   KKFACPECPKRFMRSDHLSKHI 22

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.4 bits (89), Expect = 5e-05
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 215 RPWLLQGHIRTHTGEKPFKCKVCD--KAFADKSNLRAHIQTHSKVK 258
               +  +++    +K F+C      K F  + N+R+HIQTH + +
Sbjct: 3   PRGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.7 bits (82), Expect = 4e-04
 Identities = 10/28 (35%), Positives = 18/28 (64%)

Query: 203 ICQCPHCSKSFSRPWLLQGHIRTHTGEK 230
            C  P C+K+F R + ++ HI+TH  ++
Sbjct: 20  ECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.1 bits (89), Expect = 5e-05
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 229 EKPFKCKV--CDKAFADKSNLRAHIQTHSK 256
           ++P+ C    CDKAF    +L  H ++H +
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.1 bits (89), Expect = 5e-05
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 293 EKPFKCKV--CDKAFADKSNLRAHIQTHSK 320
           ++P+ C    CDKAF    +L  H ++H +
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (87), Expect = 8e-05
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 230 KPFKCKVCDKAFADKSNLRAHIQTHS 255
           KP+KC  C KAF+  S L  H + H+
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (87), Expect = 8e-05
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 294 KPFKCKVCDKAFADKSNLRAHIQTHS 319
           KP+KC  C KAF+  S L  H + H+
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (78), Expect = 0.002
 Identities = 10/23 (43%), Positives = 17/23 (73%)

Query: 147 FQCRDCGKHYSTSSNLARHRQIH 169
           ++C +CGK +S +S L  H++IH
Sbjct: 3   YKCLECGKAFSQNSGLINHQRIH 25

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (78), Expect = 0.002
 Identities = 10/23 (43%), Positives = 17/23 (73%)

Query: 367 FQCRDCGKHYSTSSNLARHRQIH 389
           ++C +CGK +S +S L  H++IH
Sbjct: 3   YKCLECGKAFSQNSGLINHQRIH 25

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.3 bits (77), Expect = 0.002
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 258 KPFVCEKCGKAFALKSYLYKHE 279
           KP+ C +CGKAF+  S L  H+
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQ 22

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.3 bits (77), Expect = 0.002
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 322 KPFVCEKCGKAFALKSYLYKHE 343
           KP+ C +CGKAF+  S L  H+
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQ 22

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (85), Expect = 1e-04
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGE 229
           C    C KS+SR   L+ H+R+HTGE
Sbjct: 5   CTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 3e-04
 Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 230 KPFKCKV--CDKAFADKSNLRAHIQTHS 255
           KP KC    C K+++   NL+ H+++H+
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHT 28

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 3e-04
 Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 294 KPFKCKV--CDKAFADKSNLRAHIQTHS 319
           KP KC    C K+++   NL+ H+++H+
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHT 28

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.001
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 424 CQCPHCSKSFSRPWLLQGHIRTHTG 448
           C    C KS+SR   L+ H+R+HTG
Sbjct: 5   CTFEGCRKSYSRLENLKTHLRSHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.2 bits (79), Expect = 0.001
 Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 230 KPFKCKV--CDKAFADKSNLRAHIQTHS 255
           +P+ C V  CD+ F+  ++L  HI+ H+
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHT 28

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.2 bits (79), Expect = 0.001
 Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 294 KPFKCKV--CDKAFADKSNLRAHIQTHS 319
           +P+ C V  CD+ F+  ++L  HI+ H+
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHT 28

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.7 bits (75), Expect = 0.004
 Identities = 12/25 (48%), Positives = 13/25 (52%)

Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTG 228
           C    C + FSR   L  HIR HTG
Sbjct: 5   CPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.7 bits (75), Expect = 0.004
 Identities = 12/25 (48%), Positives = 13/25 (52%)

Query: 424 CQCPHCSKSFSRPWLLQGHIRTHTG 448
           C    C + FSR   L  HIR HTG
Sbjct: 5   CPVESCDRRFSRSADLTRHIRIHTG 29

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 230 KPFKCKV--CDKAFADKSNLRAHIQTHS 255
           KPF+C    C K F+   NLR H++ H+
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHT 28

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 294 KPFKCKV--CDKAFADKSNLRAHIQTHS 319
           KPF+C    C K F+   NLR H++ H+
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHT 28

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 204 CQCPHCSKSFSRPWLLQGHIRTHTGE 229
           C    C K FS  + L+ H+R HTG+
Sbjct: 5   CTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.003
 Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 2/28 (7%)

Query: 230 KPFKCKV--CDKAFADKSNLRAHIQTHS 255
           +P+ C    C+K FA  +NL++HI TH+
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.003
 Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 2/28 (7%)

Query: 294 KPFKCKV--CDKAFADKSNLRAHIQTHS 319
           +P+ C    C+K FA  +NL++HI TH+
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.5 bits (74), Expect = 0.004
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 206 CPHCSKSFSRPWLLQGHIRTHTGEK 230
           C  C     +P +L+ HIRTHT  +
Sbjct: 4   CEECGIRAKKPSMLKKHIRTHTDVR 28

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	451
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.57
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.54
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.21
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.1
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.05
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.01
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.01
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.97
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.96
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.93
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.93
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.93
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.92
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.9
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.9
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.89
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.87
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.84
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.84
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.83
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.79
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.78
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.76
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.74
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.73
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.73
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.73
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.69
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.68
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.62
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.61
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.61
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.6
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.54
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.5
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.46
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.41
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.36
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.32
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.31
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.3
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.27
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.26
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.14
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.13
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.06
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.06
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.04
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.04
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.03
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.01
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.86
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.77
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.72
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.69
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.6
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.6
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.56
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.5
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.49
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.48
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.45
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.37
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.23
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.22
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.22
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.19
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.99
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.95
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.86
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.81
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.8
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.75
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.7
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.66
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.6
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.41
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.4
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.33
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.22
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.18
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.11
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.07
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.04
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.03
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.02
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.0
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.93
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.68
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.53
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.52
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.39
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.34
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.34
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.98
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.7
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.67
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.45
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.86
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.62
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.27
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	92.87
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.77
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.66
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	91.3
d1y0jb1	36	U-shaped transcription factor, different fingers {	91.21
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	91.02
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.79
d1y0jb1	36	U-shaped transcription factor, different fingers {	90.66
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.65
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	90.13
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.28
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	88.08
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	87.66
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	87.47
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.03
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	85.69
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	84.67
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	84.22
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	83.2
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	83.04

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=9.3e-16  Score=99.71  Aligned_cols=52  Identities=35%  Similarity=0.752  Sum_probs=48.2

Q ss_pred             CcCeeccccccccCChHHHHHHHHHhcCCCceecccCcccccChhhHHhcccc
Q psy18077        293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGKAFALKSYLYKHEDS  345 (451)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  345 (451)
                      ++||.|. ||+.|.....|..|+++|++++||.|++|+++|...+.|.+|++.
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhc
Confidence            5899995 999999999999999999999999999999999999999999864

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.7e-15  Score=98.40  Aligned_cols=52  Identities=27%  Similarity=0.609  Sum_probs=37.8

Q ss_pred             cccccccccccCCChHHHHHHHHhccCCCCCCCcccCccccccCChHHHHHHHHHc
Q psy18077        365 ISFQCRDCGKHYSTSSNLARHRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH  420 (451)
Q Consensus       365 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H  420 (451)
                      ++|.|. ||+.|.....|..|+++|++   ++||.|.+|++.|.....|..|+++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~---ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLG---LRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSC---CCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhcccc---ccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            367774 77777777777777777775   67777777777777777777777665

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=3.7e-12  Score=74.64  Aligned_cols=37  Identities=32%  Similarity=0.812  Sum_probs=33.8

Q ss_pred             CCcCeeccccccccCChHHHHHHHH-HhcCCCceeccc
Q psy18077        292 SEKPFKCKVCDKAFADKSNLRAHIQ-THSKVKPFVCEK  328 (451)
Q Consensus       292 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~  328 (451)
                      .++||.|..||+.|...+.|..|++ +|++++||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4689999999999999999999986 799999999974

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.10  E-value=2.2e-11  Score=66.36  Aligned_cols=29  Identities=31%  Similarity=0.619  Sum_probs=24.7

Q ss_pred             CccccccccccCCChhhHHHHHhhhcCCC
Q psy18077        422 QICQCPHCSKSFSRPWLLQGHIRTHTGGT  450 (451)
Q Consensus       422 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  450 (451)
                      ++|+|++|+++|.+.+.|..|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46888888888888888888888888886

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=5.3e-11  Score=64.65  Aligned_cols=29  Identities=38%  Similarity=0.691  Sum_probs=25.1

Q ss_pred             CccccccccccCCChhhHHHHHhhhcCCC
Q psy18077        422 QICQCPHCSKSFSRPWLLQGHIRTHTGGT  450 (451)
Q Consensus       422 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  450 (451)
                      ++|.|++|+++|.+.+.|..|+|+|+|+|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46889999999999999999999999886

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=9.4e-11  Score=68.58  Aligned_cols=36  Identities=28%  Similarity=0.697  Sum_probs=29.9

Q ss_pred             ccccccccccccCCChHHHHHHHH-hccCCCCCCCcccCc
Q psy18077        364 TISFQCRDCGKHYSTSSNLARHRQ-IHRSPDDTKARTCPQ  402 (451)
Q Consensus       364 ~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~~~~~~~C~~  402 (451)
                      .+||+|.+||+.|...+.|.+|++ +|++   ++||+|.+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~---ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTS---ERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCC---CCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCC---CcCcCCcC
Confidence            347999999999999999999976 6876   89999874

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=2.6e-11  Score=71.22  Aligned_cols=35  Identities=29%  Similarity=0.510  Sum_probs=22.2

Q ss_pred             HHHhccCCCCCCCcccCccccccCChHHHHHHHHHcCC
Q psy18077        385 HRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQ  422 (451)
Q Consensus       385 H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  422 (451)
                      |+++|++   ++||.|+.|++.|...+.|..|+++|++
T Consensus         3 H~~~Ht~---ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           3 SEWQQRE---RRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCSCCCC---SCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cCcccCC---CCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            5556664   6666666666666666666666666655

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=6.8e-11  Score=68.35  Aligned_cols=31  Identities=35%  Similarity=0.709  Sum_probs=21.8

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKV  321 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (451)
                      +|++||.|.+|++.|...+.|..|+++|+++
T Consensus         4 TgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           4 TGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             CCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            6677777777777777777777777776654

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.1e-10  Score=68.57  Aligned_cols=31  Identities=32%  Similarity=0.699  Sum_probs=23.1

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKV  321 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (451)
                      ++++||.|++||+.|...+.|..|+++|+||
T Consensus         8 t~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           8 RERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             CCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            6777777777777777777777777777764

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=3.7e-10  Score=63.27  Aligned_cols=31  Identities=42%  Similarity=0.702  Sum_probs=25.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKV  321 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (451)
                      ++++||.|..|++.|...+.|..|+++|+||
T Consensus         3 Tgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           3 SGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            7788888888888888888888888888775

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=1.4e-10  Score=67.47  Aligned_cols=35  Identities=17%  Similarity=0.400  Sum_probs=29.0

Q ss_pred             HHHhccCCCCCCCcccCccccccCChHHHHHHHHHcCC
Q psy18077        385 HRQIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQ  422 (451)
Q Consensus       385 H~~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  422 (451)
                      |.|+|++   ++||+|..|+++|.....|..|+++|.+
T Consensus         2 h~R~HTg---eKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTG---IKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCC---SSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCC---ccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            5677886   8888888888888888888888888854

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.9e-10  Score=65.65  Aligned_cols=34  Identities=21%  Similarity=0.481  Sum_probs=26.7

Q ss_pred             HhccCCCCCCCcccCccccccCChHHHHHHHHHcCCc
Q psy18077        387 QIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTHNQI  423 (451)
Q Consensus       387 ~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~  423 (451)
                      |+|+|   ++||+|.+|+++|.....|..|+++|+++
T Consensus         1 R~HTg---ekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTG---EKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCC---CCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCC---CCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            46775   88888888888888888888888888654

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=2.7e-10  Score=63.86  Aligned_cols=28  Identities=29%  Similarity=0.557  Sum_probs=19.5

Q ss_pred             CCCcccCccccccCChHHHHHHHHHcCC
Q psy18077        395 TKARTCPQCGKLYVSMPAYSMHLRTHNQ  422 (451)
Q Consensus       395 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~  422 (451)
                      ++||+|..|+++|.....|..|+++|++
T Consensus         5 ekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           5 EKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            6777777777777777777777666665

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=4e-10  Score=60.38  Aligned_cols=28  Identities=39%  Similarity=0.994  Sum_probs=24.5

Q ss_pred             CcCeeccccccccCChHHHHHHHHHhcC
Q psy18077        293 EKPFKCKVCDKAFADKSNLRAHIQTHSK  320 (451)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  320 (451)
                      |+||+|.+|++.|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5789999999999999999999998876

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=2.3e-10  Score=61.34  Aligned_cols=24  Identities=54%  Similarity=0.830  Sum_probs=10.0

Q ss_pred             cccccccccCCChhhHHHHHhhhc
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRTHT  447 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~h~  447 (451)
                      |+|++|+++|.+...|..|+|+|+
T Consensus         4 y~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           4 FQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHH
T ss_pred             ccCCCCcCEecccccccccCCCcc
Confidence            344444444444444444444443

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.89  E-value=3.8e-10  Score=61.34  Aligned_cols=29  Identities=38%  Similarity=0.886  Sum_probs=25.1

Q ss_pred             cCeeccccccccCChHHHHHHHHHhcCCC
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      +||.|++|++.|...+.|.+|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57888899999999999999999988875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=5.9e-10  Score=63.95  Aligned_cols=33  Identities=36%  Similarity=0.856  Sum_probs=30.7

Q ss_pred             eeccc--cccccCChHHHHHHHHHhcCCCceeccc
Q psy18077        296 FKCKV--CDKAFADKSNLRAHIQTHSKVKPFVCEK  328 (451)
Q Consensus       296 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (451)
                      |.|++  |++.|.....|++|+++|+|++||+|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            78887  9999999999999999999999999963

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=7.8e-10  Score=59.93  Aligned_cols=29  Identities=41%  Similarity=0.750  Sum_probs=25.5

Q ss_pred             cCeeccccccccCChHHHHHHHHHhcCCC
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      +||.|++|++.|...+.|..|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58899999999999999999999998875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.84  E-value=9.3e-10  Score=62.49  Aligned_cols=31  Identities=35%  Similarity=0.838  Sum_probs=23.7

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKV  321 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (451)
                      +|++||.|.+|++.|...+.|++|+++|++.
T Consensus         3 TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           3 SGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            6777777777777777777777777777654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.83  E-value=3.4e-10  Score=65.84  Aligned_cols=34  Identities=38%  Similarity=0.761  Sum_probs=22.5

Q ss_pred             HHHHhcCCCCcccccchhhcCChHhHHHHHHHcC
Q psy18077        222 HIRTHTGEKPFKCKVCDKAFADKSNLRAHIQTHS  255 (451)
Q Consensus       222 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  255 (451)
                      |.++|+|++||+|.+|+++|.....|..|++.|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            4456666666666666666666666666666664

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.79  E-value=1.5e-09  Score=61.66  Aligned_cols=29  Identities=17%  Similarity=0.448  Sum_probs=21.0

Q ss_pred             CCCCcccCccccccCChHHHHHHHHHcCC
Q psy18077        394 DTKARTCPQCGKLYVSMPAYSMHLRTHNQ  422 (451)
Q Consensus       394 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  422 (451)
                      +++||+|.+|++.|.....|+.|+++|+.
T Consensus         4 GekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           4 GKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCccccCCCCCCcccChHHHHHHccccCC
Confidence            37777777777777777777777777754

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.7e-09  Score=58.91  Aligned_cols=27  Identities=44%  Similarity=0.764  Sum_probs=17.9

Q ss_pred             cccccc--ccccCCChhhHHHHHhhhcCC
Q psy18077        423 ICQCPH--CSKSFSRPWLLQGHIRTHTGG  449 (451)
Q Consensus       423 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~  449 (451)
                      +|+|++  |+++|.+.+.|+.|+|+|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            466666  666666666666666666664

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=2.3e-09  Score=59.11  Aligned_cols=29  Identities=45%  Similarity=0.669  Sum_probs=23.7

Q ss_pred             Cccccc--cccccCCChhhHHHHHhhhcCCC
Q psy18077        422 QICQCP--HCSKSFSRPWLLQGHIRTHTGGT  450 (451)
Q Consensus       422 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  450 (451)
                      ++|+|+  .|+++|++.+.|+.|+|+|+|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            357784  58888888888888888888886

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1.5e-09  Score=59.26  Aligned_cols=27  Identities=44%  Similarity=0.807  Sum_probs=18.8

Q ss_pred             cccccc--ccccCCChhhHHHHHhhhcCC
Q psy18077        423 ICQCPH--CSKSFSRPWLLQGHIRTHTGG  449 (451)
Q Consensus       423 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~  449 (451)
                      +|+|++  |+++|++.+.|+.|+|+|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCCC
Confidence            566765  777777777777777777765

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=2.3e-09  Score=61.65  Aligned_cols=31  Identities=19%  Similarity=0.398  Sum_probs=23.6

Q ss_pred             HhccCCCCCCCcccCccccccCChHHHHHHHHHc
Q psy18077        387 QIHRSPDDTKARTCPQCGKLYVSMPAYSMHLRTH  420 (451)
Q Consensus       387 ~~H~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H  420 (451)
                      |+|+|   ++||+|++|++.|.....|+.|++.+
T Consensus         1 R~HTg---ekP~~C~~C~k~F~~~~~L~~H~~~~   31 (36)
T d2ct1a2           1 RTHSG---EKPYECYICHARFTQSGTMKMHILQK   31 (36)
T ss_dssp             CCCSC---CCSEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CccCC---CCCEeCCCCcccccchHHHHHHcccc
Confidence            35775   88888888888888888888887544

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=2.3e-09  Score=61.42  Aligned_cols=33  Identities=30%  Similarity=0.774  Sum_probs=30.1

Q ss_pred             ccccc--ccccCCChHHHHHHHHhccCCCCCCCcccCc
Q psy18077        367 FQCRD--CGKHYSTSSNLARHRQIHRSPDDTKARTCPQ  402 (451)
Q Consensus       367 ~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~~~~C~~  402 (451)
                      |.|+.  |+++|.+.+.|++|+++|++   ++||+|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htg---ekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSD---TRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHT---SCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCC---CCCEeCCC
Confidence            78876  99999999999999999997   99999974

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=1.9e-09  Score=61.97  Aligned_cols=32  Identities=34%  Similarity=0.874  Sum_probs=21.2

Q ss_pred             HhcCCCCcccccchhhcCChHhHHHHHHHcCC
Q psy18077        225 THTGEKPFKCKVCDKAFADKSNLRAHIQTHSK  256 (451)
Q Consensus       225 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  256 (451)
                      +|+|++||+|++|++.|.....|..|++.+++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            56677777777777777777777777655443

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=2.6e-09  Score=55.56  Aligned_cols=20  Identities=25%  Similarity=0.546  Sum_probs=7.2

Q ss_pred             cccCccccccCChHHHHHHH
Q psy18077        398 RTCPQCGKLYVSMPAYSMHL  417 (451)
Q Consensus       398 ~~C~~C~~~f~~~~~l~~H~  417 (451)
                      |+|..||+.|...+.|..|+
T Consensus         3 y~C~eCgK~F~~~s~L~~Hq   22 (26)
T d1x6ea2           3 YKCLECGKAFSQNSGLINHQ   22 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHH
T ss_pred             ccCCCCcCeeccCcccccCc
Confidence            33333333333333333333

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=5.1e-09  Score=54.43  Aligned_cols=26  Identities=46%  Similarity=0.897  Sum_probs=20.8

Q ss_pred             cCeeccccccccCChHHHHHHHHHhc
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHS  319 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~  319 (451)
                      +||+|..||+.|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57888888888888888888888874

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.62  E-value=8.3e-10  Score=67.74  Aligned_cols=28  Identities=25%  Similarity=0.390  Sum_probs=13.7

Q ss_pred             CCCcccCc--cccccCChHHHHHHHHHcCC
Q psy18077        395 TKARTCPQ--CGKLYVSMPAYSMHLRTHNQ  422 (451)
Q Consensus       395 ~~~~~C~~--C~~~f~~~~~l~~H~~~H~~  422 (451)
                      ++||.|.+  |++.|.....|..|+++|++
T Consensus        16 ekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_          16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             TTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             CCCeECCcCCCCccccCchHHHhhcccccC
Confidence            55555544  55555444444444444443

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.61  E-value=2.9e-09  Score=65.27  Aligned_cols=32  Identities=41%  Similarity=0.808  Sum_probs=27.4

Q ss_pred             CCCcCeeccc--cccccCChHHHHHHHHHhcCCC
Q psy18077        291 SSEKPFKCKV--CDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       291 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      .+++||.|.+  |++.|...+.|+.|+++|+|++
T Consensus        14 ~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          14 MPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             ETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            7788888877  8888888888888888888875

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.2e-08  Score=55.55  Aligned_cols=28  Identities=36%  Similarity=0.863  Sum_probs=24.3

Q ss_pred             cCeeccc--cccccCChHHHHHHHHHhcCC
Q psy18077        294 KPFKCKV--CDKAFADKSNLRAHIQTHSKV  321 (451)
Q Consensus       294 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  321 (451)
                      +||.|++  |++.|...+.|+.|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5788988  999999999999999999875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1.2e-08  Score=55.56  Aligned_cols=28  Identities=43%  Similarity=0.876  Sum_probs=25.0

Q ss_pred             cCeeccc--cccccCChHHHHHHHHHhcCC
Q psy18077        294 KPFKCKV--CDKAFADKSNLRAHIQTHSKV  321 (451)
Q Consensus       294 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  321 (451)
                      +||.|++  |++.|...+.|+.|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5899987  999999999999999999885

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=2.6e-08  Score=48.78  Aligned_cols=25  Identities=48%  Similarity=0.834  Sum_probs=19.8

Q ss_pred             cccccccccCCChhhHHHHHhhhcC
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRTHTG  448 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~h~~  448 (451)
                      .+|.+|++.|+++..|+.|||.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            4688888888888888888888875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=2.4e-08  Score=54.94  Aligned_cols=29  Identities=38%  Similarity=0.803  Sum_probs=23.1

Q ss_pred             cCeecc--ccccccCChHHHHHHHHHhcCCC
Q psy18077        294 KPFKCK--VCDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       294 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      +||.|+  .|++.|...++|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            578885  48888888888888888888875

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.46  E-value=2.3e-08  Score=53.85  Aligned_cols=26  Identities=50%  Similarity=0.861  Sum_probs=15.3

Q ss_pred             cccccc--ccccCCChhhHHHHHhhhcC
Q psy18077        423 ICQCPH--CSKSFSRPWLLQGHIRTHTG  448 (451)
Q Consensus       423 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  448 (451)
                      +|+|++  |+++|++.+.|..|+|+|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            455544  66666666666666666654

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.41  E-value=7.5e-08  Score=53.13  Aligned_cols=26  Identities=23%  Similarity=0.569  Sum_probs=12.1

Q ss_pred             CCcccCc--cccccCChHHHHHHHHHcC
Q psy18077        396 KARTCPQ--CGKLYVSMPAYSMHLRTHN  421 (451)
Q Consensus       396 ~~~~C~~--C~~~f~~~~~l~~H~~~H~  421 (451)
                      +||.|.+  |+++|.+...|.+|+++|+
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            4444444  4444444444444444443

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.36  E-value=8.9e-08  Score=51.45  Aligned_cols=27  Identities=37%  Similarity=0.978  Sum_probs=22.1

Q ss_pred             cCeeccc--cccccCChHHHHHHHHHhcC
Q psy18077        294 KPFKCKV--CDKAFADKSNLRAHIQTHSK  320 (451)
Q Consensus       294 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  320 (451)
                      +||.|++  |++.|.+.+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5788877  88888888888888888875

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=8.3e-08  Score=50.94  Aligned_cols=18  Identities=28%  Similarity=0.567  Sum_probs=7.1

Q ss_pred             cccccCChHHHHHHHHHc
Q psy18077        403 CGKLYVSMPAYSMHLRTH  420 (451)
Q Consensus       403 C~~~f~~~~~l~~H~~~H  420 (451)
                      |+++|.+...|+.|+++|
T Consensus        10 C~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4          10 CNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSSTTTTHHHHHHH
T ss_pred             cCCcCCCHHHHHHHHhhc
Confidence            444443333333333333

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.31  E-value=1.6e-07  Score=51.73  Aligned_cols=28  Identities=36%  Similarity=0.891  Sum_probs=20.5

Q ss_pred             CcCeeccc--cccccCChHHHHHHHHHhcC
Q psy18077        293 EKPFKCKV--CDKAFADKSNLRAHIQTHSK  320 (451)
Q Consensus       293 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  320 (451)
                      ++||.|.+  |++.|...+.|++|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46777776  77777777777777777764

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.1e-07  Score=50.51  Aligned_cols=26  Identities=38%  Similarity=0.742  Sum_probs=24.1

Q ss_pred             Ccccccc--ccccCCChhhHHHHHhhhc
Q psy18077        422 QICQCPH--CSKSFSRPWLLQGHIRTHT  447 (451)
Q Consensus       422 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  447 (451)
                      ++|.|++  |+++|++.+.|+.|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4689988  9999999999999999996

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=2.3e-07  Score=45.35  Aligned_cols=24  Identities=29%  Similarity=0.700  Sum_probs=12.7

Q ss_pred             cccCccccccCChHHHHHHHHHcC
Q psy18077        398 RTCPQCGKLYVSMPAYSMHLRTHN  421 (451)
Q Consensus       398 ~~C~~C~~~f~~~~~l~~H~~~H~  421 (451)
                      .+|..|++.|+++..|..|||.|+
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CccchhhhHhcchhHHHHHhhccC
Confidence            445555555555555555555554

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=3.3e-07  Score=46.36  Aligned_cols=27  Identities=37%  Similarity=0.653  Sum_probs=24.1

Q ss_pred             cccccccccCCChhhHHHHHhhhcCCC
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRTHTGGT  450 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  450 (451)
                      |.|++|+.....++.|+.|+|+|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=7.2e-07  Score=45.82  Aligned_cols=26  Identities=35%  Similarity=0.758  Sum_probs=14.5

Q ss_pred             CCcccCccccccCChHHHHHHHHHcC
Q psy18077        396 KARTCPQCGKLYVSMPAYSMHLRTHN  421 (451)
Q Consensus       396 ~~~~C~~C~~~f~~~~~l~~H~~~H~  421 (451)
                      +||.|++|...|..+..+..|+|+|.
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshd   27 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHD   27 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHS
T ss_pred             CCcccchHHHHhhccccceEeeeccc
Confidence            45555555555555555555555554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.13  E-value=7.5e-07  Score=45.15  Aligned_cols=25  Identities=24%  Similarity=0.545  Sum_probs=13.6

Q ss_pred             CCcccCccccccCChHHHHHHHHHc
Q psy18077        396 KARTCPQCGKLYVSMPAYSMHLRTH  420 (451)
Q Consensus       396 ~~~~C~~C~~~f~~~~~l~~H~~~H  420 (451)
                      +||.|.+||+.|......++|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4555555555555555555555554

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.06  E-value=1.3e-06  Score=42.86  Aligned_cols=26  Identities=42%  Similarity=0.870  Sum_probs=23.5

Q ss_pred             ccccccccCCChhhHHHHHhhhcCCC
Q psy18077        425 QCPHCSKSFSRPWLLQGHIRTHTGGT  450 (451)
Q Consensus       425 ~C~~C~~~f~~~~~l~~H~~~h~~~~  450 (451)
                      .|+.|.++|.++..|+.|.|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58999999999999999999999986

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.06  E-value=1.1e-06  Score=44.49  Aligned_cols=27  Identities=37%  Similarity=0.872  Sum_probs=19.2

Q ss_pred             CcCeeccccccccCChHHHHHHHHHhc
Q psy18077        293 EKPFKCKVCDKAFADKSNLRAHIQTHS  319 (451)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  319 (451)
                      ++||.|.+||+.|......++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            467777777777777777777777663

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1e-06  Score=46.39  Aligned_cols=32  Identities=38%  Similarity=0.717  Sum_probs=27.9

Q ss_pred             cCeeccccccccCChHHHHHHHHHhcCCCcee
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHSKVKPFV  325 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  325 (451)
                      +...|..||+.|.+...|.+|...|++++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            55789999999999999999999999999883

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.1e-06  Score=44.05  Aligned_cols=27  Identities=22%  Similarity=0.452  Sum_probs=13.2

Q ss_pred             CCcccCccccccCChHHHHHHHHHcCC
Q psy18077        396 KARTCPQCGKLYVSMPAYSMHLRTHNQ  422 (451)
Q Consensus       396 ~~~~C~~C~~~f~~~~~l~~H~~~H~~  422 (451)
                      +||+|..|.+.....+.|..|+|+|++
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            445555555544444445555544443

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.5e-06  Score=44.62  Aligned_cols=28  Identities=32%  Similarity=0.672  Sum_probs=26.4

Q ss_pred             CccccccccccCCChhhHHHHHhhhcCC
Q psy18077        422 QICQCPHCSKSFSRPWLLQGHIRTHTGG  449 (451)
Q Consensus       422 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  449 (451)
                      ++|.|++|++.|..+..+..|+|+|-|+
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCcccchHHHHhhccccceEeeecccCc
Confidence            5799999999999999999999999875

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.6e-06  Score=43.47  Aligned_cols=28  Identities=29%  Similarity=0.516  Sum_probs=17.0

Q ss_pred             CccccccccccCCChhhHHHHHhhhcCC
Q psy18077        422 QICQCPHCSKSFSRPWLLQGHIRTHTGG  449 (451)
Q Consensus       422 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  449 (451)
                      ++|+|.+|++.-.+.+.|..|+|.|+|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CcceeeecccccCCchheEEeeecccCc
Confidence            3466666666666666666666666653

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=3.2e-06  Score=44.47  Aligned_cols=28  Identities=29%  Similarity=0.574  Sum_probs=25.5

Q ss_pred             cccccccccCCChhhHHHHHhhhcCCCC
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRTHTGGTN  451 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~  451 (451)
                      ..|.+||+.|.....|.+|..+|+||||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekp   33 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKP   33 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCC
Confidence            4699999999999999999999999987

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=6.5e-06  Score=41.04  Aligned_cols=26  Identities=35%  Similarity=0.612  Sum_probs=21.2

Q ss_pred             cccccccccCCChhhHHHHHhhhcCC
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRTHTGG  449 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~h~~~  449 (451)
                      ..|..||++|...+.|++|..+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            45888888888888888888888875

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1.4e-05  Score=40.30  Aligned_cols=27  Identities=33%  Similarity=0.671  Sum_probs=23.3

Q ss_pred             eeccccccccCChHHHHHHHHHhcCCC
Q psy18077        296 FKCKVCDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      |.|+.|+......+.|+.|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            788889999888999999999988764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1.3e-05  Score=41.16  Aligned_cols=17  Identities=29%  Similarity=0.592  Sum_probs=7.1

Q ss_pred             cccccCChHHHHHHHHH
Q psy18077        403 CGKLYVSMPAYSMHLRT  419 (451)
Q Consensus       403 C~~~f~~~~~l~~H~~~  419 (451)
                      |++++...++|++|+++
T Consensus        10 C~K~YtdPSSLRKH~k~   26 (29)
T d2glia5          10 CTKRYTDPSSLRKHVKT   26 (29)
T ss_dssp             TCCEESSHHHHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHh
Confidence            44444444444444443

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=1.6e-05  Score=39.59  Aligned_cols=26  Identities=35%  Similarity=0.649  Sum_probs=19.2

Q ss_pred             eeccccccccCChHHHHHHHHHhcCC
Q psy18077        296 FKCKVCDKAFADKSNLRAHIQTHSKV  321 (451)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (451)
                      ..|..||+.|...+.|++|..+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46777777777777777777777764

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=2.3e-05  Score=38.86  Aligned_cols=25  Identities=28%  Similarity=0.522  Sum_probs=12.0

Q ss_pred             CCcccCccccccCChHHHHHHHHHc
Q psy18077        396 KARTCPQCGKLYVSMPAYSMHLRTH  420 (451)
Q Consensus       396 ~~~~C~~C~~~f~~~~~l~~H~~~H  420 (451)
                      +||+|..|++.-...++|..|+|.|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            3444444444444444444444444

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.56  E-value=1.8e-05  Score=39.82  Aligned_cols=26  Identities=35%  Similarity=0.689  Sum_probs=14.2

Q ss_pred             cccccccccCCChhhHHHHHhhhcCC
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRTHTGG  449 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~h~~~  449 (451)
                      |.|.+|...|..+-.|+.||-+|+|+
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccCC
Confidence            45555555555555555555555553

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.50  E-value=3.8e-05  Score=36.94  Aligned_cols=23  Identities=35%  Similarity=0.651  Sum_probs=13.1

Q ss_pred             cccccccccCCChhhHHHHHhhh
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRTH  446 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~h  446 (451)
                      |+|..|...|..++.|..|+|+|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45555555555555555555555

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.49  E-value=3.3e-05  Score=37.15  Aligned_cols=23  Identities=30%  Similarity=0.872  Sum_probs=13.8

Q ss_pred             cccccccccCCChHHHHHHHHhc
Q psy18077        367 FQCRDCGKHYSTSSNLARHRQIH  389 (451)
Q Consensus       367 ~~C~~C~~~f~~~~~L~~H~~~H  389 (451)
                      |+|.+|.++|..++.|.+|+++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666666666666666666555

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=4.3e-05  Score=39.24  Aligned_cols=27  Identities=44%  Similarity=0.935  Sum_probs=17.7

Q ss_pred             cCeeccc--cccccCChHHHHHHHHHhcC
Q psy18077        294 KPFKCKV--CDKAFADKSNLRAHIQTHSK  320 (451)
Q Consensus       294 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  320 (451)
                      +||.|.+  |++.+...++|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4666666  66777777777777765543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=5.3e-05  Score=37.56  Aligned_cols=26  Identities=58%  Similarity=1.026  Sum_probs=21.5

Q ss_pred             cCeeccccccccCChHHHHHHHHHhc
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHS  319 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~  319 (451)
                      +||+|..|+..-...+.|+.|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            67888888888888888888888875

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=8.1e-05  Score=37.64  Aligned_cols=24  Identities=29%  Similarity=0.434  Sum_probs=14.0

Q ss_pred             ccccccccccCCChhhHHHHHhhh
Q psy18077        423 ICQCPHCSKSFSRPWLLQGHIRTH  446 (451)
Q Consensus       423 ~~~C~~C~~~f~~~~~l~~H~~~h  446 (451)
                      +|.|.+|.+..+..+.|+.|+++.
T Consensus         2 py~cqyc~yrsadssnlkthiktk   25 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTK   25 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhhcc
Confidence            455666666666666666666553

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.23  E-value=0.00014  Score=35.54  Aligned_cols=26  Identities=35%  Similarity=0.671  Sum_probs=19.2

Q ss_pred             eccccccccCChHHHHHHHHHhcCCC
Q psy18077        297 KCKVCDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       297 ~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      +|+.|.+.|.++.-|+.|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57777777777777777777777764

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.22  E-value=0.00019  Score=35.95  Aligned_cols=29  Identities=34%  Similarity=0.786  Sum_probs=24.8

Q ss_pred             CcCeeccccccccCChHHHHHHHHHhcCC
Q psy18077        293 EKPFKCKVCDKAFADKSNLRAHIQTHSKV  321 (451)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (451)
                      +..|.|..|...|.....|+.||-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45688999999999999999999888875

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=7.5e-05  Score=37.60  Aligned_cols=23  Identities=13%  Similarity=0.425  Sum_probs=13.5

Q ss_pred             CcccCccccccCChHHHHHHHHH
Q psy18077        397 ARTCPQCGKLYVSMPAYSMHLRT  419 (451)
Q Consensus       397 ~~~C~~C~~~f~~~~~l~~H~~~  419 (451)
                      ||.|..|++.|.++..|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            45566666666666666666553

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.19  E-value=8.6e-05  Score=41.32  Aligned_cols=26  Identities=27%  Similarity=0.668  Sum_probs=15.3

Q ss_pred             cccccccccCCChhhHHHHHhhhcCC
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRTHTGG  449 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~h~~~  449 (451)
                      |+|.+|++.|.+...|--||+.|..+
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             cCCCCCCCccCCcccccchHhhhcch
Confidence            55666666666666666666665544

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00016  Score=36.35  Aligned_cols=23  Identities=26%  Similarity=0.680  Sum_probs=18.3

Q ss_pred             cccccccccccCChHhHHHHHhh
Q psy18077        146 SFQCRDCGKHYSTSSNLARHRQI  168 (451)
Q Consensus       146 ~~~C~~C~~~f~~~~~l~~H~~~  168 (451)
                      ||.|..|+..|.+..+|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            57788888888888888888875

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00034  Score=35.32  Aligned_cols=26  Identities=42%  Similarity=0.823  Sum_probs=18.6

Q ss_pred             cCeeccccccccCChHHHHHHHHHhc
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHS  319 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~  319 (451)
                      +||.|..|.....+.++|+.|+++.+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            46777777777777777777777643

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.86  E-value=0.00036  Score=34.94  Aligned_cols=24  Identities=25%  Similarity=0.570  Sum_probs=11.7

Q ss_pred             CcccCc--cccccCChHHHHHHHHHc
Q psy18077        397 ARTCPQ--CGKLYVSMPAYSMHLRTH  420 (451)
Q Consensus       397 ~~~C~~--C~~~f~~~~~l~~H~~~H  420 (451)
                      ||+|+.  |++.|...+.|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            455542  555555555555554443

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.81  E-value=0.00052  Score=38.09  Aligned_cols=29  Identities=21%  Similarity=0.714  Sum_probs=20.9

Q ss_pred             cCeeccccccccCChHHHHHHHHHhcCCC
Q psy18077        294 KPFKCKVCDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      +.|.|.+|++.|.+...|--||+.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            45777777777777777777777775543

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.00047  Score=38.36  Aligned_cols=24  Identities=29%  Similarity=0.837  Sum_probs=14.0

Q ss_pred             CCcCeeccccccccCChHHHHHHH
Q psy18077        292 SEKPFKCKVCDKAFADKSNLRAHI  315 (451)
Q Consensus       292 ~~~~~~C~~C~~~f~~~~~l~~H~  315 (451)
                      |-+||.|..|++.|.....+.+|.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhh
Confidence            345566666666666666655554

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.75  E-value=0.0007  Score=33.88  Aligned_cols=24  Identities=42%  Similarity=0.895  Sum_probs=15.0

Q ss_pred             Ceeccc--cccccCChHHHHHHHHHh
Q psy18077        295 PFKCKV--CDKAFADKSNLRAHIQTH  318 (451)
Q Consensus       295 ~~~C~~--C~~~f~~~~~l~~H~~~h  318 (451)
                      ||.|+.  |++.|...+.|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            566654  666666666666666655

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.0005  Score=38.22  Aligned_cols=26  Identities=19%  Similarity=0.478  Sum_probs=20.8

Q ss_pred             CCCCcccCccccccCChHHHHHHHHH
Q psy18077        394 DTKARTCPQCGKLYVSMPAYSMHLRT  419 (451)
Q Consensus       394 ~~~~~~C~~C~~~f~~~~~l~~H~~~  419 (451)
                      +.|||.|..|++.|-.+.++.+|...
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhh
Confidence            36888888888888888888888643

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.00048  Score=34.73  Aligned_cols=22  Identities=18%  Similarity=0.264  Sum_probs=9.5

Q ss_pred             CcccCccccccCChHHHHHHHH
Q psy18077        397 ARTCPQCGKLYVSMPAYSMHLR  418 (451)
Q Consensus       397 ~~~C~~C~~~f~~~~~l~~H~~  418 (451)
                      ||+|++|.+.....++|..|++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHH
Confidence            3444444444444444444443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.0005  Score=34.64  Aligned_cols=28  Identities=25%  Similarity=0.480  Sum_probs=25.1

Q ss_pred             CccccccccccCCChhhHHHHHhhhcCC
Q psy18077        422 QICQCPHCSKSFSRPWLLQGHIRTHTGG  449 (451)
Q Consensus       422 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  449 (451)
                      ++|+|.+|+....+.+.|..|++.-||+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            4699999999999999999999887764

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.00052  Score=35.46  Aligned_cols=24  Identities=29%  Similarity=0.610  Sum_probs=11.9

Q ss_pred             CcccCc--cccccCChHHHHHHH-HHc
Q psy18077        397 ARTCPQ--CGKLYVSMPAYSMHL-RTH  420 (451)
Q Consensus       397 ~~~C~~--C~~~f~~~~~l~~H~-~~H  420 (451)
                      ||.|.+  |.+.|+..+.-.+|+ |+|
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTH   28 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTH   28 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             CccccCCChhhhhcchhhhhhhccccc
Confidence            455544  555555555555553 444

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.40  E-value=0.0013  Score=33.02  Aligned_cols=28  Identities=43%  Similarity=0.806  Sum_probs=21.2

Q ss_pred             cCeeccc--cccccCChHHHHHHHHHhcCC
Q psy18077        294 KPFKCKV--CDKAFADKSNLRAHIQTHSKV  321 (451)
Q Consensus       294 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  321 (451)
                      +||.|..  |.+.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4666765  888888888888888888764

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.0012  Score=32.77  Aligned_cols=23  Identities=30%  Similarity=0.572  Sum_probs=12.0

Q ss_pred             cccCccccccCChHHHHHHHHHc
Q psy18077        398 RTCPQCGKLYVSMPAYSMHLRTH  420 (451)
Q Consensus       398 ~~C~~C~~~f~~~~~l~~H~~~H  420 (451)
                      -+|+.|.++.+++..|+.|.|+|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            34555555555555555555544

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.22  E-value=0.0014  Score=32.47  Aligned_cols=23  Identities=39%  Similarity=0.541  Sum_probs=15.1

Q ss_pred             ccccccccCCChhhHHHHHhhhc
Q psy18077        425 QCPHCSKSFSRPWLLQGHIRTHT  447 (451)
Q Consensus       425 ~C~~C~~~f~~~~~l~~H~~~h~  447 (451)
                      +|+.|++...++..|+.|.|+|-
T Consensus         4 kc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGGC
T ss_pred             cCcccccccCcHHHHHHhhcccc
Confidence            46666666666666666666664

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.18  E-value=0.0015  Score=31.28  Aligned_cols=21  Identities=14%  Similarity=0.551  Sum_probs=11.2

Q ss_pred             CcccCccccccCChHHHHHHH
Q psy18077        397 ARTCPQCGKLYVSMPAYSMHL  417 (451)
Q Consensus       397 ~~~C~~C~~~f~~~~~l~~H~  417 (451)
                      ||+|+-|...|-.+..|+.||
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            455555555555555555554

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.11  E-value=0.0014  Score=32.94  Aligned_cols=21  Identities=43%  Similarity=0.642  Sum_probs=12.5

Q ss_pred             ccccCCChhhHHHHHhhhcCC
Q psy18077        429 CSKSFSRPWLLQGHIRTHTGG  449 (451)
Q Consensus       429 C~~~f~~~~~l~~H~~~h~~~  449 (451)
                      |.++|.+...|.+|..+|+|+
T Consensus        10 c~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2          10 CEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CCCEESSTTHHHHHHHHHHTC
T ss_pred             ccccchhhhhhhhhhccccCC
Confidence            556666666666666666554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.07  E-value=0.002  Score=35.36  Aligned_cols=28  Identities=29%  Similarity=0.666  Sum_probs=21.6

Q ss_pred             CCCCccc--CccccccCChHHHHHHHHHcC
Q psy18077        394 DTKARTC--PQCGKLYVSMPAYSMHLRTHN  421 (451)
Q Consensus       394 ~~~~~~C--~~C~~~f~~~~~l~~H~~~H~  421 (451)
                      ++|||.|  +-|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            3788888  568888888888888877774

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.04  E-value=0.0017  Score=33.48  Aligned_cols=20  Identities=35%  Similarity=0.682  Sum_probs=11.4

Q ss_pred             cccccccccCCChhhHHHHH
Q psy18077        424 CQCPHCSKSFSRPWLLQGHI  443 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~  443 (451)
                      |.|.+|++.|+++..|.+|.
T Consensus         2 f~C~~C~R~FaRrDLlLRH~   21 (31)
T d2adra2           2 YPCGLCNRAFTRRDLLIRHA   21 (31)
T ss_dssp             EECTTTCCEESSHHHHHHHH
T ss_pred             cccccccchhhHHHHHHHHH
Confidence            45555555555555555554

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.03  E-value=0.0017  Score=33.48  Aligned_cols=23  Identities=26%  Similarity=0.626  Sum_probs=15.5

Q ss_pred             ccccccccccCCChHHHHHHHHh
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQI  388 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~  388 (451)
                      ||.|.+|++.|..+.-|.+|...
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            46677777777777777777643

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.02  E-value=0.0012  Score=34.13  Aligned_cols=25  Identities=44%  Similarity=0.893  Sum_probs=13.0

Q ss_pred             Ceeccc--cccccCChHHHHHHH-HHhc
Q psy18077        295 PFKCKV--CDKAFADKSNLRAHI-QTHS  319 (451)
Q Consensus       295 ~~~C~~--C~~~f~~~~~l~~H~-~~h~  319 (451)
                      ||.|.+  |.+.|++.+.--.|+ |+|.
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CccccCCChhhhhcchhhhhhhcccccc
Confidence            455554  555555555555554 4443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.00  E-value=0.0018  Score=30.99  Aligned_cols=23  Identities=17%  Similarity=0.629  Sum_probs=21.2

Q ss_pred             ccccccccccCCChHHHHHHHHh
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQI  388 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~  388 (451)
                      ||+|..|...|-.+..|+.|+..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            79999999999999999999853

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.93  E-value=0.0018  Score=34.76  Aligned_cols=24  Identities=33%  Similarity=0.697  Sum_probs=18.0

Q ss_pred             cccccccCCChhhHHHHHhhhcCC
Q psy18077        426 CPHCSKSFSRPWLLQGHIRTHTGG  449 (451)
Q Consensus       426 C~~C~~~f~~~~~l~~H~~~h~~~  449 (451)
                      |+-=++.|.....|..|||+|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            333456788888888888888886

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.68  E-value=0.003  Score=30.33  Aligned_cols=22  Identities=32%  Similarity=0.747  Sum_probs=14.5

Q ss_pred             cccccccccCCChhhHHHHHhh
Q psy18077        424 CQCPHCSKSFSRPWLLQGHIRT  445 (451)
Q Consensus       424 ~~C~~C~~~f~~~~~l~~H~~~  445 (451)
                      |.|+.|-+.|+++..+..|+++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            5566666666666666666654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.53  E-value=0.0038  Score=35.97  Aligned_cols=25  Identities=28%  Similarity=0.652  Sum_probs=21.8

Q ss_pred             ccccccccccCCChHHHHHHHHhcc
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQIHR  390 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~H~  390 (451)
                      .|.|.+|+|.|+....|+.|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4889999999999999999988774

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.52  E-value=0.0038  Score=36.00  Aligned_cols=25  Identities=32%  Similarity=0.523  Sum_probs=18.7

Q ss_pred             ccccccccccCCChhhHHHHHhhhc
Q psy18077        423 ICQCPHCSKSFSRPWLLQGHIRTHT  447 (451)
Q Consensus       423 ~~~C~~C~~~f~~~~~l~~H~~~h~  447 (451)
                      .|.|.+|+|.|+....|++|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4778888888888888888776663

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.39  E-value=0.0081  Score=32.88  Aligned_cols=28  Identities=32%  Similarity=0.793  Sum_probs=20.3

Q ss_pred             CCcCeec--cccccccCChHHHHHHHHHhc
Q psy18077        292 SEKPFKC--KVCDKAFADKSNLRAHIQTHS  319 (451)
Q Consensus       292 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~  319 (451)
                      .++||.|  +-|+..|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            3677887  448888888888877777664

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.34  E-value=0.008  Score=29.48  Aligned_cols=20  Identities=35%  Similarity=0.747  Sum_probs=9.8

Q ss_pred             CcccCccccccCChHHHHHH
Q psy18077        397 ARTCPQCGKLYVSMPAYSMH  416 (451)
Q Consensus       397 ~~~C~~C~~~f~~~~~l~~H  416 (451)
                      ||+|..||+.+..+..|..|
T Consensus         1 pf~c~kcgkcyfrkenlleh   20 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEH   20 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHH
Confidence            34455555554444444444

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.34  E-value=0.0071  Score=29.66  Aligned_cols=23  Identities=39%  Similarity=0.813  Sum_probs=20.9

Q ss_pred             ccccccccccCCChHHHHHHHHh
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQI  388 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~  388 (451)
                      ||+|..||+.+..+.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68999999999999999999754

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.98  E-value=0.011  Score=31.16  Aligned_cols=24  Identities=25%  Similarity=0.534  Sum_probs=13.9

Q ss_pred             CcccCccccccCChHHHHHHHHHc
Q psy18077        397 ARTCPQCGKLYVSMPAYSMHLRTH  420 (451)
Q Consensus       397 ~~~C~~C~~~f~~~~~l~~H~~~H  420 (451)
                      .|.|..|+++|.++..+.+|...-
T Consensus         4 afvcskcgktftrrntm~rha~nc   27 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNC   27 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHC
T ss_pred             eeeecccccchhcchHHHHHhhhc
Confidence            355666666666666666665443

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.70  E-value=0.011  Score=28.32  Aligned_cols=23  Identities=26%  Similarity=0.606  Sum_probs=16.7

Q ss_pred             cccccccccCCChHHHHHHHHhc
Q psy18077        367 FQCRDCGKHYSTSSNLARHRQIH  389 (451)
Q Consensus       367 ~~C~~C~~~f~~~~~L~~H~~~H  389 (451)
                      |.|+.|-+.|+.+.++..|.++-
T Consensus         2 ypcp~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEEe
Confidence            66777777777777777776653

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.67  E-value=0.014  Score=30.66  Aligned_cols=28  Identities=36%  Similarity=0.847  Sum_probs=24.9

Q ss_pred             ccccccccccCCChHHHHHHHHhccCCC
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQIHRSPD  393 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~  393 (451)
                      .|.|..|++.|..+..+.+|...-.|++
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~d   31 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGPD   31 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCCC
Confidence            5899999999999999999998877654

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.45  E-value=0.013  Score=28.78  Aligned_cols=22  Identities=27%  Similarity=0.682  Sum_probs=12.9

Q ss_pred             cccCccccccCChHHHHHHHHH
Q psy18077        398 RTCPQCGKLYVSMPAYSMHLRT  419 (451)
Q Consensus       398 ~~C~~C~~~f~~~~~l~~H~~~  419 (451)
                      |+|+.|+....+++.|+.|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            5566666666666666666553

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.86  E-value=0.032  Score=28.39  Aligned_cols=28  Identities=29%  Similarity=0.663  Sum_probs=23.0

Q ss_pred             cCeeccc--cccccCChHHHHHHHHHhcCC
Q psy18077        294 KPFKCKV--CDKAFADKSNLRAHIQTHSKV  321 (451)
Q Consensus       294 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  321 (451)
                      +.|.|.+  |+..|...-.|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4577765  899999999999999888875

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.62  E-value=0.019  Score=28.25  Aligned_cols=24  Identities=33%  Similarity=0.665  Sum_probs=21.6

Q ss_pred             ccccccccccCCChhhHHHHHhhh
Q psy18077        423 ICQCPHCSKSFSRPWLLQGHIRTH  446 (451)
Q Consensus       423 ~~~C~~C~~~f~~~~~l~~H~~~h  446 (451)
                      .|.|+.|+-..++++.|+.|+|.-
T Consensus         2 k~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CccCCcchhheeehhhhhHHhhhc
Confidence            378999999999999999999863

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.27  E-value=0.035  Score=27.73  Aligned_cols=22  Identities=23%  Similarity=0.683  Sum_probs=12.2

Q ss_pred             cccccchhhcCChHhHHHHHHH
Q psy18077        232 FKCKVCDKAFADKSNLRAHIQT  253 (451)
Q Consensus       232 ~~C~~C~~~f~~~~~l~~H~~~  253 (451)
                      |.|..|++..++...++.|+..
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            4555555555555555555544

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.87  E-value=0.0091  Score=37.67  Aligned_cols=17  Identities=24%  Similarity=0.618  Sum_probs=9.9

Q ss_pred             ccccccccccCCChHHH
Q psy18077        366 SFQCRDCGKHYSTSSNL  382 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L  382 (451)
                      .|+|+.|+++|+....+
T Consensus        14 ~y~Cp~C~~~ys~Lda~   30 (62)
T d1vd4a_          14 SFKCPVCSSTFTDLEAN   30 (62)
T ss_dssp             EEECSSSCCEEEHHHHH
T ss_pred             ceECCCCCCCcchhhHH
Confidence            56666666666554443

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.77  E-value=0.031  Score=29.84  Aligned_cols=21  Identities=19%  Similarity=0.257  Sum_probs=17.6

Q ss_pred             cccccCChHHHHHHHHHhcCC
Q psy18077        301 CDKAFADKSNLRAHIQTHSKV  321 (451)
Q Consensus       301 C~~~f~~~~~l~~H~~~h~~~  321 (451)
                      =++.|.....|..|||+|+|+
T Consensus        13 ~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          13 ELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCcchhHHHHHHHHhhcCCC
Confidence            345688999999999999985

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.66  E-value=0.061  Score=26.80  Aligned_cols=20  Identities=35%  Similarity=0.698  Sum_probs=10.6

Q ss_pred             cccCccccccCChHHHHHHH
Q psy18077        398 RTCPQCGKLYVSMPAYSMHL  417 (451)
Q Consensus       398 ~~C~~C~~~f~~~~~l~~H~  417 (451)
                      |.|..|++...+...++.|+
T Consensus         3 ftc~hcgkqlks~~gmkyhv   22 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHV   22 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEE
Confidence            45555555555555555553

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.30  E-value=0.029  Score=34.68  Aligned_cols=26  Identities=27%  Similarity=0.521  Sum_probs=15.9

Q ss_pred             CCcccCccccccCChHHHHHHHHHcC
Q psy18077        396 KARTCPQCGKLYVSMPAYSMHLRTHN  421 (451)
Q Consensus       396 ~~~~C~~C~~~f~~~~~l~~H~~~H~  421 (451)
                      ..|+|..|+..|.+...|..|+..|+
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhcc
Confidence            34666666666666666666666554

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.21  E-value=0.057  Score=28.01  Aligned_cols=21  Identities=38%  Similarity=0.831  Sum_probs=18.4

Q ss_pred             ccccccccccCCChHHHHHHH
Q psy18077        366 SFQCRDCGKHYSTSSNLARHR  386 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~  386 (451)
                      .|.|.-||..|++.+.|..|+
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            588999999999999998885

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.02  E-value=0.058  Score=26.65  Aligned_cols=18  Identities=39%  Similarity=0.702  Sum_probs=10.6

Q ss_pred             cccccCChHHHHHHHHHc
Q psy18077        403 CGKLYVSMPAYSMHLRTH  420 (451)
Q Consensus       403 C~~~f~~~~~l~~H~~~H  420 (451)
                      |++.|...+.+++|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            555666666666665554

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.79  E-value=0.11  Score=25.15  Aligned_cols=24  Identities=33%  Similarity=0.825  Sum_probs=17.9

Q ss_pred             eeccc--cccccCChHHHHHHHHHhc
Q psy18077        296 FKCKV--CDKAFADKSNLRAHIQTHS  319 (451)
Q Consensus       296 ~~C~~--C~~~f~~~~~l~~H~~~h~  319 (451)
                      |.|..  |++.|.....|+.|+-.|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            45543  8888888888888887765

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=90.66  E-value=0.074  Score=27.56  Aligned_cols=23  Identities=22%  Similarity=0.395  Sum_probs=19.7

Q ss_pred             CCcccCccccccCChHHHHHHHH
Q psy18077        396 KARTCPQCGKLYVSMPAYSMHLR  418 (451)
Q Consensus       396 ~~~~C~~C~~~f~~~~~l~~H~~  418 (451)
                      ..|.|.-||-.|++.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            46889999999999999999853

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.65  E-value=0.069  Score=26.36  Aligned_cols=19  Identities=26%  Similarity=0.621  Sum_probs=17.6

Q ss_pred             cccccCCChHHHHHHHHhc
Q psy18077        371 DCGKHYSTSSNLARHRQIH  389 (451)
Q Consensus       371 ~C~~~f~~~~~L~~H~~~H  389 (451)
                      -|++.|...+.++.|+-+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            5999999999999999887

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.13  E-value=0.051  Score=34.13  Aligned_cols=37  Identities=22%  Similarity=0.328  Sum_probs=24.1

Q ss_pred             CCceecccCcccccChhhHHhcccccCCCccCCCCCcccCccccccccccccccc
Q psy18077        321 VKPFVCEKCGKAFALKSYLYKHEDSSCLKSYDSSSNGHLNKFTTISFQCRDCGKH  375 (451)
Q Consensus       321 ~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~  375 (451)
                      ...|.|+.|++.|.....+..                  -......|.|..|+-.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L------------------~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL------------------FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH------------------EETTTTEEBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHHHh------------------cCcCCCeEEecCCCCE
Confidence            456888888888887665543                  1222335888888754

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.28  E-value=0.13  Score=26.05  Aligned_cols=23  Identities=35%  Similarity=0.918  Sum_probs=14.8

Q ss_pred             ccccccCCChhhHHHHHhhhcCC
Q psy18077        427 PHCSKSFSRPWLLQGHIRTHTGG  449 (451)
Q Consensus       427 ~~C~~~f~~~~~l~~H~~~h~~~  449 (451)
                      +.|+..|.....|..|+-.|+||
T Consensus         9 ~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           9 ADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             GGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CCcchhhccchhhhHHhhhhcCC
Confidence            34666666666666666666664

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.08  E-value=0.5  Score=26.83  Aligned_cols=32  Identities=31%  Similarity=0.605  Sum_probs=24.3

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcCCC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSKVK  322 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (451)
                      ..+.|-.|++|+.......+|++|+..-+-.+
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            45678889999988888888888887644333

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.66  E-value=0.089  Score=33.60  Aligned_cols=20  Identities=15%  Similarity=0.645  Sum_probs=10.5

Q ss_pred             cccCccccccCChHHHHHHH
Q psy18077        398 RTCPQCGKLYVSMPAYSMHL  417 (451)
Q Consensus       398 ~~C~~C~~~f~~~~~l~~H~  417 (451)
                      |.|..|++.|.+...|..|+
T Consensus        16 fYCv~C~K~F~se~~l~~H~   35 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHF   35 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHT
T ss_pred             EecccccCccCCHHHHHHHH
Confidence            45555555555555555553

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.47  E-value=0.065  Score=34.26  Aligned_cols=24  Identities=25%  Similarity=0.469  Sum_probs=19.0

Q ss_pred             ccccccccccccCCChHHHHHHHH
Q psy18077        364 TISFQCRDCGKHYSTSSNLARHRQ  387 (451)
Q Consensus       364 ~~~~~C~~C~~~f~~~~~L~~H~~  387 (451)
                      ...|.|..|++.|.+...|..|++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCEEecccccCccCCHHHHHHHHc
Confidence            346888888888888888888864

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.03  E-value=0.15  Score=24.70  Aligned_cols=20  Identities=35%  Similarity=0.567  Sum_probs=11.5

Q ss_pred             cccccCCChhhHHHHHhhhc
Q psy18077        428 HCSKSFSRPWLLQGHIRTHT  447 (451)
Q Consensus       428 ~C~~~f~~~~~l~~H~~~h~  447 (451)
                      -|+++|.....|+.|+-+|+
T Consensus         8 ~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           8 NCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHHHHH
T ss_pred             CchHHHhhccceEEEeeccc
Confidence            35566666566666655554

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.69  E-value=0.26  Score=25.86  Aligned_cols=25  Identities=28%  Similarity=0.732  Sum_probs=22.3

Q ss_pred             ccccccccccCCChHHHHHHHHhcc
Q psy18077        366 SFQCRDCGKHYSTSSNLARHRQIHR  390 (451)
Q Consensus       366 ~~~C~~C~~~f~~~~~L~~H~~~H~  390 (451)
                      .|+|.+|.+.++..+++-+|..+-+
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             EEEeehhhHHHHHHHHHHHHHHhhc
Confidence            6999999999999999999976655

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=84.67  E-value=0.44  Score=24.96  Aligned_cols=27  Identities=33%  Similarity=0.749  Sum_probs=19.5

Q ss_pred             CCcCeeccccccccCChHHHHHHHHHh
Q psy18077        292 SEKPFKCKVCDKAFADKSNLRAHIQTH  318 (451)
Q Consensus       292 ~~~~~~C~~C~~~f~~~~~l~~H~~~h  318 (451)
                      ++..|.|.+|.+.+...+++-+|..+-
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtS   31 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTS   31 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhh
Confidence            345678888888888888887776543

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=84.22  E-value=0.22  Score=27.27  Aligned_cols=26  Identities=23%  Similarity=0.446  Sum_probs=18.1

Q ss_pred             CcCeeccccccccCChHHHHHHHHHhcCCCceecccCcc
Q psy18077        293 EKPFKCKVCDKAFADKSNLRAHIQTHSKVKPFVCEKCGK  331 (451)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  331 (451)
                      ++.|.|.+||..             |.++.|-+|++|+.
T Consensus         3 ~~~~vC~vCGyi-------------~~g~~Pe~CPvCg~   28 (36)
T d1yuza2           3 DKFHLCPICGYI-------------HKGEDFEKCPICFR   28 (36)
T ss_dssp             CCEEECSSSCCE-------------EESSCCSBCTTTCC
T ss_pred             CCEEECCCCCCE-------------eeCCCCCcCCCCCC
Confidence            456788888875             34566777888874

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.20  E-value=0.21  Score=27.55  Aligned_cols=10  Identities=20%  Similarity=0.826  Sum_probs=4.2

Q ss_pred             eecccccccc
Q psy18077        296 FKCKVCDKAF  305 (451)
Q Consensus       296 ~~C~~C~~~f  305 (451)
                      |.|.+||..+
T Consensus         6 ~~C~vCG~i~   15 (37)
T d1nnqa2           6 YICPICGYTA   15 (37)
T ss_dssp             EECTTTCCEE
T ss_pred             EECCCCCCEe
Confidence            3444444433

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.04  E-value=0.82  Score=28.01  Aligned_cols=30  Identities=23%  Similarity=0.675  Sum_probs=25.9

Q ss_pred             CCCcCeeccccccccCChHHHHHHHHHhcC
Q psy18077        291 SSEKPFKCKVCDKAFADKSNLRAHIQTHSK  320 (451)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  320 (451)
                      .+...|+|..|...|.+...|..|+..|..
T Consensus        14 ~~s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          14 LQNSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CCCSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             cCCceeeechhHHHHhhHHHHHHHHHhccH
Confidence            455679999999999999999999998864