Psyllid ID: psy2040

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
Protein Sequence
MTALSIILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILSPTPSHFTDFSTSWSQSMTALSIILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHccccEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccccEEEEcccccHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHccccEEEEEEcc
Coil and Loop (DISEMBL)
MTALSIILSELILLIIKLLYSALESILLtlippsekslegeiilsptpshftdfstSWSQSMTALSIILSELILLIIKLLYSALESILLtlippsekslEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGyknihtykrs
Flexible Loop (DISEMBL)
MTALSIILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILSPTPSHFTDFSTSWSQSMTALSIILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKqmleeqgyknihtykrs
Low Complexity Region (SEG)
MTAlsiilselilliikllysalESILLTLIPPSEKSLEGEIILSPTPSHFTDFSTSWSQSMTAlsiilselilliikllysalESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS
Disordered region (IsUnstruct)
***LSIILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILSPTPSHFTDFSTSWSQSMTALSIILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID*************************
Disordered Region (DISOPRED)
**ALSIILSELILLIIKLLYSALESIL********************************QSMTALSIILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKR*
Disordered Region (DISEMBL)
MTALSIILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILSPTPSHFTDFSTSWSQSMTALSIILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS
Disordered Region (DISPRO)
*TALSIILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILSPTPSHF*D**TSWSQSMTALSIILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTALSIILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILSPTPSHFTDFSTSWSQSMTALSIILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	159	2.2.26 [Sep-21-2011]
Q05A13	316	Short-chain dehydrogenase	yes	N/A	0.559	0.281	0.415	2e-16
Q8N3Y7	309	Epidermal retinol dehydro	yes	N/A	0.540	0.278	0.441	4e-16
Q7TQA3	309	Epidermal retinol dehydro	no	N/A	0.553	0.284	0.409	1e-14
A1L1W4	339	Retinol dehydrogenase 10-	no	N/A	0.503	0.235	0.387	7e-13
Q7T2D1	336	Retinol dehydrogenase 10-	no	N/A	0.503	0.238	0.4	1e-12
Q8VCR2	304	17-beta-hydroxysteroid de	no	N/A	0.496	0.259	0.430	2e-12
Q7Z5P4	300	17-beta-hydroxysteroid de	no	N/A	0.471	0.25	0.434	3e-11
Q5XGF7	341	Retinol dehydrogenase 10	no	N/A	0.496	0.231	0.367	6e-11
Q80ZF7	341	Retinol dehydrogenase 10	no	N/A	0.503	0.234	0.375	6e-11
Q5NVG2	300	Estradiol 17-beta-dehydro	no	N/A	0.465	0.246	0.453	8e-11

>sp|Q05A13|S16C6_MOUSE Short-chain dehydrogenase/reductase family 16C member 6 OS=Mus musculus GN=Sdr16c6 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 60/89 (67%)

Query: 69  LSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTL 128
           +++  +   K LY  LES++  +IP  +K + GEI+L+TGAG+G+GR LA  F  H  TL
Sbjct: 4   VADTAIFFGKFLYYFLESLVFKVIPKRKKDVSGEIVLITGAGSGLGRLLAIHFASHGATL 63

Query: 129 VCWDIDEKGNNETKQMLEEQGYKNIHTYK 157
           V WDI+++GN ET ++++++G   +  YK
Sbjct: 64  VLWDINQEGNMETCRLVKQKGDVKVFAYK 92

Mus musculus (taxid: 10090)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q8N3Y7|RDHE2_HUMAN Epidermal retinol dehydrogenase 2 OS=Homo sapiens GN=SDR16C5 PE=2 SV=2

 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 58/86 (67%)

Query: 71  ELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVC 130
           +L + + K L+S LE+++  L+P   K++ GEI+L+TGAG+G+GR LA QF +    LV 
Sbjct: 10  KLFIFLGKSLFSLLEAMIFALLPKPRKNVAGEIVLITGAGSGLGRLLALQFARLGSVLVL 69

Query: 131 WDIDEKGNNETKQMLEEQGYKNIHTY 156
           WDI+++GN ET +M  E G   +H Y
Sbjct: 70  WDINKEGNEETCKMAREAGATRVHAY 95

Oxidoreductase with strong preference for NAD. Active in both the oxidative and reductive directions. Oxidizes all-trans-retinol in all-trans-retinaldehyde. No activity was detected with 11-cis-retinol or 11-cis-retinaldehyde as substrates with either NAD(+)/NADH or NADP(+)/NADPH.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 5

>sp|Q7TQA3|RDHE2_MOUSE Epidermal retinol dehydrogenase 2 OS=Mus musculus GN=Sdr16c5 PE=2 SV=1

 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 57/88 (64%)

Query: 69  LSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTL 128
           +  L++ + K L S LE++L  +I    K++ GEI+L+TGAG+G+GR LA QF +    L
Sbjct: 8   VKNLLVFLGKSLLSVLEALLFHVISKPRKNVAGEIVLITGAGSGLGRLLALQFARLGAVL 67

Query: 129 VCWDIDEKGNNETKQMLEEQGYKNIHTY 156
           V WD++++ N+ET Q+  E G   +H Y
Sbjct: 68  VLWDVNKEANDETHQLAREAGAARVHAY 95

Oxidoreductase with strong preference for NAD. Active in both the oxidative and reductive directions. Oxidizes all-trans-retinol in all-trans-retinaldehyde. No activity was detected with 11-cis-retinol or 11-cis-retinaldehyde as substrates with either NAD(+)/NADH or NADP(+)/NADPH.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 5

>sp|A1L1W4|RD10A_DANRE Retinol dehydrogenase 10-A OS=Danio rerio GN=rdh10a PE=2 SV=1

 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 52/80 (65%)

Query: 68  ILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVT 127
           I  E  L+++K+ ++ + +    LI P EKS+ G++ ++TGAG G+GR  AK+F + + T
Sbjct: 3   IFVEFFLVMLKVCWAIVMAGFKWLIRPKEKSVAGQVCVITGAGGGLGRLFAKEFARRRAT 62

Query: 128 LVCWDIDEKGNNETKQMLEE 147
           LV WDI+   N ET +M+ +
Sbjct: 63  LVLWDINSHSNEETAEMVRQ 82

Retinol dehydrogenase with a clear preference for NADP. Converts all-trans-retinol to all-trans-retinal. Has no detectable activity towards 11-cis-retinol, 9-cis-retinol and 13-cis-retinol.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q7T2D1|RD10B_DANRE Retinol dehydrogenase 10-B OS=Danio rerio GN=rdh10b PE=2 SV=2

 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 53/80 (66%)

Query: 68  ILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVT 127
           I +EL ++  K+++S + +     I P EKS+EG++ ++TGAG+G+GR  A +F + + T
Sbjct: 3   IATELFVVTFKIIWSFVLAGAKWFIRPREKSVEGQVCVITGAGSGLGRLFALEFARRRAT 62

Query: 128 LVCWDIDEKGNNETKQMLEE 147
           LV WDI+ + N ET +M  E
Sbjct: 63  LVLWDINRQSNEETAEMARE 82

Retinol dehydrogenase with a clear preference for NADP. Converts all-trans-retinol to all-trans-retinal. Has no detectable activity towards 11-cis-retinol, 9-cis-retinol and 13-cis-retinol.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q8VCR2|DHB13_MOUSE 17-beta-hydroxysteroid dehydrogenase 13 OS=Mus musculus GN=Hsd17b13 PE=1 SV=2

 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 51/79 (64%)

Query: 71  ELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVC 130
           E +LL+  ++YS LES++   IP   KS+ G+ +L+TGAG+GIGR  A +F + K  LV 
Sbjct: 6   EFLLLVGVIIYSYLESLVKFFIPRRRKSVTGQTVLITGAGHGIGRLTAYEFAKQKSRLVL 65

Query: 131 WDIDEKGNNETKQMLEEQG 149
           WDI+++G  ET     + G
Sbjct: 66  WDINKRGVEETADKCRKLG 84

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q7Z5P4|DHB13_HUMAN 17-beta-hydroxysteroid dehydrogenase 13 OS=Homo sapiens GN=HSD17B13 PE=2 SV=1

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 81  YSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE 140
           YS LES++   IP   KS+ GEI+L+TGAG+GIGR+   +F + +  LV WDI+++G  E
Sbjct: 16  YSYLESLVKFFIPQRRKSVAGEIVLITGAGHGIGRQTTYEFAKRQSILVLWDINKRGVEE 75

Query: 141 TKQMLEEQGYKNIHTY 156
           T     + G    H Y
Sbjct: 76  TAAECRKLGV-TAHAY 90

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q5XGF7|RDH10_XENTR Retinol dehydrogenase 10 OS=Xenopus tropicalis GN=rdh10 PE=2 SV=1

 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 51/79 (64%)

Query: 68  ILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVT 127
           I+ E  L+  K+L++ + +    L+ P +KS+ G++ L+TGAG+G+GR  A +F + +  
Sbjct: 3   IVLEFFLVTFKVLWAFVLAAAKWLVRPKDKSVAGQVCLITGAGSGLGRLFALEFARRRAQ 62

Query: 128 LVCWDIDEKGNNETKQMLE 146
           LV WDI+ + N ET +M+ 
Sbjct: 63  LVLWDINSQSNEETAEMVR 81

Retinol dehydrogenase with a clear preference for NADP. Converts all-trans-retinol to all-trans-retinal. Has no detectable activity towards 11-cis-retinol, 9-cis-retinol and 13-cis-retinol.

Xenopus tropicalis (taxid: 8364)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q80ZF7|RDH10_RAT Retinol dehydrogenase 10 OS=Rattus norvegicus GN=Rdh10 PE=1 SV=1

 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 50/80 (62%)

Query: 68  ILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVT 127
           I+ E  L+  K+L++ + +    L+ P EKS+ G++ L+TGAG+G+GR  A +F + +  
Sbjct: 3   IVVEFFLVTFKVLWAFVLAAARWLVRPKEKSVAGQVCLITGAGSGLGRLFALEFARRRAL 62

Query: 128 LVCWDIDEKGNNETKQMLEE 147
           LV WDI+ + N ET  M+  
Sbjct: 63  LVLWDINTQSNEETAGMVRH 82

Retinol dehydrogenase with a clear preference for NADP. Converts all-trans-retinol to all-trans-retinal.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q5NVG2|DHB11_PONAB Estradiol 17-beta-dehydrogenase 11 OS=Pongo abelii GN=HSD17B11 PE=2 SV=1

 Score = 66.2 bits (160), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 1/75 (1%)

Query: 82  SALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
            +LES +   IP   KS+ GEI+L+TGAG+GIGR  A +F + K  LV WDI++ G  ET
Sbjct: 17  CSLESFVKLFIPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEET 76

Query: 142 KQMLEEQGYKNIHTY 156
               +  G K +HT+
Sbjct: 77  AAKCKGLGAK-VHTF 90

Can convert androstan-3-alpha,17-beta-diol (3-alpha-diol) to androsterone in vitro, suggesting that it may participate in androgen metabolism during steroidogenesis. May act by metabolizing compounds that stimulate steroid synthesis and/or by generating metabolites that inhibit it. Has no activity toward DHEA (dehydroepiandrosterone), or A-dione (4-androste-3,17-dione), and only a slight activity toward testosterone to A-dione.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
193591893	331	PREDICTED: estradiol 17-beta-dehydrogena	0.503	0.241	0.587	8e-22
157819525	316	short-chain dehydrogenase/reductase fami	0.559	0.281	0.415	2e-15
395841905	318	PREDICTED: epidermal retinol dehydrogena	0.540	0.270	0.418	5e-15
397505639	329	PREDICTED: LOW QUALITY PROTEIN: short-ch	0.559	0.270	0.404	7e-15
90085457	309	unnamed protein product [Macaca fascicul	0.540	0.278	0.418	7e-15
386781740	309	epidermal retinol dehydrogenase 2 [Macac	0.540	0.278	0.418	7e-15
355779703	309	Epidermal retinol dehydrogenase 2 [Macac	0.540	0.278	0.418	7e-15
123959730	316	short-chain dehydrogenase/reductase fami	0.559	0.281	0.415	9e-15
326917646	275	PREDICTED: epidermal retinol dehydrogena	0.484	0.28	0.467	9e-15
291234079	305	PREDICTED: retinol dehydrogenase 10-like	0.534	0.278	0.470	1e-14

>gi|193591893|ref|XP_001951338.1| PREDICTED: estradiol 17-beta-dehydrogenase 11-like [Acyrthosiphon pisum]

 Score =  108 bits (270), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 47/80 (58%), Positives = 63/80 (78%)

Query: 78  KLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137
           K +Y+ +ESI+ T +PP EKSL+ E+IL+TGAG+GIGRELA  F      +VCWD+DEKG
Sbjct: 41  KFIYTTVESIIRTFLPPLEKSLKDEVILITGAGHGIGRELALLFAVQNAIIVCWDLDEKG 100

Query: 138 NNETKQMLEEQGYKNIHTYK 157
           NNETK +L+ +GYK ++TYK
Sbjct: 101 NNETKHILKIKGYKRVYTYK 120

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157819525|ref|NP_001102826.1| short-chain dehydrogenase/reductase family 16C member 6 [Rattus norvegicus] gi|149061012|gb|EDM11622.1| similar to short chain dehydrogenase reductase 9 (predicted) [Rattus norvegicus]

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 60/89 (67%)

Query: 69  LSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTL 128
           +++ ++   K LY  LES++  +IP   K + GEI+L+TGAG+G+GR LA  F  H  TL
Sbjct: 4   VADTVIFFGKFLYYFLESLVFKVIPKRRKDVSGEIVLITGAGSGLGRLLAMHFANHGATL 63

Query: 129 VCWDIDEKGNNETKQMLEEQGYKNIHTYK 157
           V WDI+++GN ET ++++++G   +  YK
Sbjct: 64  VLWDINQEGNMETYKLVKQKGDVKVFAYK 92

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395841905|ref|XP_003793766.1| PREDICTED: epidermal retinol dehydrogenase 2 [Otolemur garnettii]

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 61/86 (70%)

Query: 71  ELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVC 130
           + ++ + KLL++ +E+++  L+P   K++ GEI+L+TGAG+G+GR LA QF +    LV 
Sbjct: 10  KFLIFVGKLLFTLVEAMIFGLLPKPRKNVAGEIVLITGAGSGLGRLLALQFARLGSVLVL 69

Query: 131 WDIDEKGNNETKQMLEEQGYKNIHTY 156
           WDI+++GN ET +M++E G   +H Y
Sbjct: 70  WDINKEGNEETSRMVQEAGAPQVHAY 95

Source: Otolemur garnettii

Species: Otolemur garnettii

Genus: Otolemur

Family: Galagidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|397505639|ref|XP_003823360.1| PREDICTED: LOW QUALITY PROTEIN: short-chain dehydrogenase/reductase family 16C member 6-like [Pan paniscus]

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 65/89 (73%)

Query: 68  ILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVT 127
           ++++ ++L+ K LY  LES++  +IP  +K++ GEI+L+TGAG+G+GR+LA  F +    
Sbjct: 3   VIADTLVLLGKFLYYFLESLVYKIIPKKKKNVAGEIVLVTGAGSGLGRQLAIHFARFGAI 62

Query: 128 LVCWDIDEKGNNETKQMLEEQGYKNIHTY 156
           LV WD++++GN ET ++++E+G K +  Y
Sbjct: 63  LVLWDVNQEGNMETCRLVKEKGGKKVFPY 91

Source: Pan paniscus

Species: Pan paniscus

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|90085457|dbj|BAE91469.1| unnamed protein product [Macaca fascicularis]

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 60/86 (69%)

Query: 71  ELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVC 130
           +L + + K L++ LE+++  L+P  +K++ GEI+L+TGAG+G+GR LA QF +    LV 
Sbjct: 10  KLFIFLGKSLFTLLEAMIFALLPKQQKNVAGEIVLITGAGSGLGRLLALQFARRGSVLVL 69

Query: 131 WDIDEKGNNETKQMLEEQGYKNIHTY 156
           WD++++GN ET +M +E G   +H Y
Sbjct: 70  WDVNKEGNEETCKMAQEAGVTRVHAY 95

Source: Macaca fascicularis

Species: Macaca fascicularis

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|386781740|ref|NP_001247665.1| epidermal retinol dehydrogenase 2 [Macaca mulatta] gi|355697969|gb|EHH28517.1| Epidermal retinol dehydrogenase 2 [Macaca mulatta] gi|384942048|gb|AFI34629.1| epidermal retinol dehydrogenase 2 [Macaca mulatta] gi|387541438|gb|AFJ71346.1| epidermal retinol dehydrogenase 2 [Macaca mulatta]

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 60/86 (69%)

Query: 71  ELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVC 130
           +L + + K L++ LE+++  L+P  +K++ GEI+L+TGAG+G+GR LA QF +    LV 
Sbjct: 10  KLFIFLGKSLFTLLEAMIFALLPKQQKNVAGEIVLITGAGSGLGRLLALQFARRGSVLVL 69

Query: 131 WDIDEKGNNETKQMLEEQGYKNIHTY 156
           WD++++GN ET +M +E G   +H Y
Sbjct: 70  WDVNKEGNEETCKMAQEAGVTRVHAY 95

Source: Macaca mulatta

Species: Macaca mulatta

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|355779703|gb|EHH64179.1| Epidermal retinol dehydrogenase 2 [Macaca fascicularis]

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 60/86 (69%)

Query: 71  ELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVC 130
           +L + + K L++ LE+++  L+P  +K++ GEI+L+TGAG+G+GR LA QF +    LV 
Sbjct: 10  KLFIFLGKSLFTLLEAMIFALLPKQQKNVAGEIVLITGAGSGLGRLLALQFARRGSVLVL 69

Query: 131 WDIDEKGNNETKQMLEEQGYKNIHTY 156
           WD++++GN ET +M +E G   +H Y
Sbjct: 70  WDVNKEGNEETCKMAQEAGVTRVHAY 95

Source: Macaca fascicularis

Species: Macaca fascicularis

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|123959730|ref|NP_001074179.1| short-chain dehydrogenase/reductase family 16C member 6 [Mus musculus] gi|123795786|sp|Q05A13.1|S16C6_MOUSE RecName: Full=Short-chain dehydrogenase/reductase family 16C member 6 gi|116138428|gb|AAI25453.1| Short chain dehydrogenase/reductase family 16C, member 6 [Mus musculus] gi|116138509|gb|AAI25451.1| Short chain dehydrogenase/reductase family 16C, member 6 [Mus musculus] gi|148673754|gb|EDL05701.1| mCG51169 [Mus musculus]

 Score = 85.1 bits (209), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 60/89 (67%)

Query: 69  LSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTL 128
           +++  +   K LY  LES++  +IP  +K + GEI+L+TGAG+G+GR LA  F  H  TL
Sbjct: 4   VADTAIFFGKFLYYFLESLVFKVIPKRKKDVSGEIVLITGAGSGLGRLLAIHFASHGATL 63

Query: 129 VCWDIDEKGNNETKQMLEEQGYKNIHTYK 157
           V WDI+++GN ET ++++++G   +  YK
Sbjct: 64  VLWDINQEGNMETCRLVKQKGDVKVFAYK 92

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326917646|ref|XP_003205107.1| PREDICTED: epidermal retinol dehydrogenase 2-like [Meleagris gallopavo]

 Score = 85.1 bits (209), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 52/77 (67%)

Query: 80  LYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139
           +Y   +S +  + PP +KS  GEI+L+TGA NGIGR++A  F   + TLV WDIDE+GN 
Sbjct: 16  VYILFKSFIQCIFPPCKKSFAGEIVLITGAANGIGRQIALHFAPLEATLVLWDIDEEGNR 75

Query: 140 ETKQMLEEQGYKNIHTY 156
           ET ++ +E+G K +  Y
Sbjct: 76  ETTRLAKEKGAKQVFAY 92

Source: Meleagris gallopavo

Species: Meleagris gallopavo

Genus: Meleagris

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|291234079|ref|XP_002736979.1| PREDICTED: retinol dehydrogenase 10-like protein-like [Saccoglossus kowalevskii]

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 59/85 (69%)

Query: 67  IILSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKV 126
           +I+ E I+LI+K+ +  L  I    +PP++KSL GEI+L+TGAG+GIGR +A  F +H  
Sbjct: 2   LIIFEAIVLILKITWFNLVGIFRFFVPPTKKSLVGEIVLITGAGSGIGRLMAINFAKHGC 61

Query: 127 TLVCWDIDEKGNNETKQMLEEQGYK 151
           TLV WDID+  N+ET +++   G K
Sbjct: 62  TLVLWDIDKDSNDETTEIITALGGK 86

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
UNIPROTKB|E1C5Q5	277	LOC428538 "Uncharacterized pro	0.452	0.259	0.486	1.6e-15
UNIPROTKB|F1N8Y4	234	LOC428538 "Uncharacterized pro	0.452	0.307	0.486	1.6e-15
UNIPROTKB|E1C5Q4	303	LOC428538 "Uncharacterized pro	0.452	0.237	0.486	1.8e-15
RGD|1562060	316	Sdr16c6 "short chain dehydroge	0.459	0.231	0.452	2.7e-14
MGI|MGI:2685269	316	Sdr16c6 "short chain dehydroge	0.459	0.231	0.452	4.6e-14
UNIPROTKB|Q8N3Y7	309	SDR16C5 "Epidermal retinol deh	0.452	0.233	0.458	1.6e-13
UNIPROTKB|G3V145	318	SDR16C5 "Retinal short chain d	0.452	0.226	0.458	1.8e-13
UNIPROTKB|F1NUP9	305	SDR16C5 "Uncharacterized prote	0.452	0.236	0.458	1.9e-13
ZFIN|ZDB-GENE-040426-2861	306	sdr16c5b "short chain dehydrog	0.452	0.235	0.458	1.9e-13
UNIPROTKB|E2RAA8	309	SDR16C5 "Uncharacterized prote	0.452	0.233	0.444	7.6e-13

UNIPROTKB|E1C5Q5 LOC428538 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 35/72 (48%), Positives = 49/72 (68%)

Query:    85 ESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM 144
             +S++  + PP +KS  GEI+L+TGA NGIGR++A  F   + TLV WDIDE+GN ET ++
Sbjct:    21 KSLIQCIFPPCKKSFAGEIVLITGAANGIGRQIALHFAPLEATLVLWDIDEEGNRETVRL 80

Query:   145 LEEQGYKNIHTY 156
               E G K +  Y
Sbjct:    81 ARENGAKQVFAY 92

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1N8Y4 LOC428538 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 35/72 (48%), Positives = 49/72 (68%)

Query:    85 ESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM 144
             +S++  + PP +KS  GEI+L+TGA NGIGR++A  F   + TLV WDIDE+GN ET ++
Sbjct:    32 KSLIQCIFPPCKKSFAGEIVLITGAANGIGRQIALHFAPLEATLVLWDIDEEGNRETVRL 91

Query:   145 LEEQGYKNIHTY 156
               E G K +  Y
Sbjct:    92 ARENGAKQVFAY 103

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|E1C5Q4 LOC428538 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 195 (73.7 bits), Expect = 1.8e-15, P = 1.8e-15
 Identities = 35/72 (48%), Positives = 49/72 (68%)

Query:    85 ESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM 144
             +S++  + PP +KS  GEI+L+TGA NGIGR++A  F   + TLV WDIDE+GN ET ++
Sbjct:    21 KSLIQCIFPPCKKSFAGEIVLITGAANGIGRQIALHFAPLEATLVLWDIDEEGNRETVRL 80

Query:   145 LEEQGYKNIHTY 156
               E G K +  Y
Sbjct:    81 ARENGAKQVFAY 92

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004745 "retinol dehydrogenase activity" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0042574 "retinal metabolic process" evidence=IEA

GO:0043616 "keratinocyte proliferation" evidence=IEA

RGD|1562060 Sdr16c6 "short chain dehydrogenase/reductase family 16C, member 6" [Rattus norvegicus (taxid:10116)]

 Score = 186 (70.5 bits), Expect = 2.7e-14, P = 2.7e-14
 Identities = 33/73 (45%), Positives = 51/73 (69%)

Query:    85 ESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM 144
             ES++  +IP   K + GEI+L+TGAG+G+GR LA  F  H  TLV WDI+++GN ET ++
Sbjct:    20 ESLVFKVIPKRRKDVSGEIVLITGAGSGLGRLLAMHFANHGATLVLWDINQEGNMETYKL 79

Query:   145 LEEQGYKNIHTYK 157
             ++++G   +  YK
Sbjct:    80 VKQKGDVKVFAYK 92

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

MGI|MGI:2685269 Sdr16c6 "short chain dehydrogenase/reductase family 16C, member 6" [Mus musculus (taxid:10090)]

 Score = 184 (69.8 bits), Expect = 4.6e-14, P = 4.6e-14
 Identities = 33/73 (45%), Positives = 52/73 (71%)

Query:    85 ESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM 144
             ES++  +IP  +K + GEI+L+TGAG+G+GR LA  F  H  TLV WDI+++GN ET ++
Sbjct:    20 ESLVFKVIPKRKKDVSGEIVLITGAGSGLGRLLAIHFASHGATLVLWDINQEGNMETCRL 79

Query:   145 LEEQGYKNIHTYK 157
             ++++G   +  YK
Sbjct:    80 VKQKGDVKVFAYK 92

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|Q8N3Y7 SDR16C5 "Epidermal retinol dehydrogenase 2" [Homo sapiens (taxid:9606)]

 Score = 179 (68.1 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 33/72 (45%), Positives = 49/72 (68%)

Query:    85 ESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM 144
             E+++  L+P   K++ GEI+L+TGAG+G+GR LA QF +    LV WDI+++GN ET +M
Sbjct:    24 EAMIFALLPKPRKNVAGEIVLITGAGSGLGRLLALQFARLGSVLVLWDINKEGNEETCKM 83

Query:   145 LEEQGYKNIHTY 156
               E G   +H Y
Sbjct:    84 AREAGATRVHAY 95

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0042572 "retinol metabolic process" evidence=IEA;IDA

GO:0042574 "retinal metabolic process" evidence=IDA

GO:0004745 "retinol dehydrogenase activity" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0050908 "detection of light stimulus involved in visual perception" evidence=NAS

GO:0043616 "keratinocyte proliferation" evidence=IMP

UNIPROTKB|G3V145 SDR16C5 "Retinal short chain dehydrogenase reductase isoform 1, isoform CRA_c" [Homo sapiens (taxid:9606)]

 Score = 179 (68.1 bits), Expect = 1.8e-13, P = 1.8e-13
 Identities = 33/72 (45%), Positives = 49/72 (68%)

Query:    85 ESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM 144
             E+++  L+P   K++ GEI+L+TGAG+G+GR LA QF +    LV WDI+++GN ET +M
Sbjct:    24 EAMIFALLPKPRKNVAGEIVLITGAGSGLGRLLALQFARLGSVLVLWDINKEGNEETCKM 83

Query:   145 LEEQGYKNIHTY 156
               E G   +H Y
Sbjct:    84 AREAGATRVHAY 95

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1NUP9 SDR16C5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 178 (67.7 bits), Expect = 1.9e-13, P = 1.9e-13
 Identities = 33/72 (45%), Positives = 51/72 (70%)

Query:    85 ESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM 144
             E+++L  +P  +K++ GEI+L+TGAG+GIGR L+ +F +   TLV WDI++ G  ET ++
Sbjct:    20 EALVLLFVPKRKKNVSGEIVLITGAGSGIGRLLSLKFAKLGATLVLWDINQDGLKETLRL 79

Query:   145 LEEQGYKNIHTY 156
              EE G   IH+Y
Sbjct:    80 AEENGAVRIHSY 91

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

ZFIN|ZDB-GENE-040426-2861 sdr16c5b "short chain dehydrogenase/reductase family 16C, member 5b" [Danio rerio (taxid:7955)]

 Score = 178 (67.7 bits), Expect = 1.9e-13, P = 1.9e-13
 Identities = 33/72 (45%), Positives = 49/72 (68%)

Query:    85 ESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM 144
             E+ +   IPP  K++ GE++LLTGAG+GIGR +A +F +    LV WDI+E GN ET ++
Sbjct:    20 EAFVRLFIPPRRKNVSGELVLLTGAGSGIGRLMALEFARLDARLVLWDINEDGNKETARL 79

Query:   145 LEEQGYKNIHTY 156
             ++E+     HTY
Sbjct:    80 IKEKYGARAHTY 91

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

UNIPROTKB|E2RAA8 SDR16C5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 173 (66.0 bits), Expect = 7.6e-13, P = 7.6e-13
 Identities = 32/72 (44%), Positives = 50/72 (69%)

Query:    85 ESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM 144
             ES++ T+IP   K++ GEI+L+TGAG+G+GR LA +F +    LV WDI+++GN +T +M
Sbjct:    24 ESMVFTIIPKPRKNVAGEIVLITGAGSGLGRLLALRFARLGSVLVLWDINKEGNEDTCRM 83

Query:   145 LEEQGYKNIHTY 156
               E G   ++ Y
Sbjct:    84 AREAGATRVYAY 95

GO:0043616 "keratinocyte proliferation" evidence=IEA

GO:0042574 "retinal metabolic process" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0004745 "retinol dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	159
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	3e-14
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	4e-10
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	2e-09
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	3e-09
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-07
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-07
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	9e-07
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	2e-06
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	4e-06
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	4e-06
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	6e-06
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-05
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-05
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	2e-05
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-05
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-05
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-05
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	3e-05
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	4e-05
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	4e-05
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-05
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	6e-05
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	7e-05
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	8e-05
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	8e-05
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	9e-05
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	1e-04
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-04
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	1e-04
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	2e-04
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	2e-04
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	2e-04
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	2e-04
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	2e-04
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	3e-04
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	3e-04
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	3e-04
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	3e-04
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	3e-04
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	4e-04
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	4e-04
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	4e-04
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	5e-04
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	5e-04
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	6e-04
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-04
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	7e-04
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	9e-04
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	9e-04
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	0.001
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	0.001
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	0.001
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.001
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	0.001
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	0.001
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	0.001
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	0.001
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	0.001
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	0.001
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	0.002
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	0.002
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	0.002
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	0.002
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	0.002
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	0.003
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	0.003
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	0.003
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	0.003
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	0.003
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	0.003
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	0.004
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	0.004

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 67.3 bits (165), Expect = 3e-14
 Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)

Query: 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYK 157
           I+L+TG G+GIGR LA +F +    +V  DI+EKG  ET   + + G K +H YK
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGK-VHYYK 54

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 56.8 bits (138), Expect = 4e-10
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 81  YSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE 140
           Y +LE   L  +P   K L G++ L+TGA  GIG+  AK+       +V  D+DE+    
Sbjct: 403 YWSLEQAKLQRMPK-PKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEA 461

Query: 141 TKQMLEEQG 149
               L    
Sbjct: 462 AAAELGGPD 470

Length = 681

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 54.6 bits (132), Expect = 2e-09
 Identities = 19/53 (35%), Positives = 30/53 (56%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
               G+++++TGAG+GIGRE A  F +    +V  DIDE     T +++   G
Sbjct: 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAG 363

Length = 582

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 54.1 bits (130), Expect = 3e-09
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 81  YSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE 140
           Y  LE   L  +P  EK+L   +  +TG   GIGRE A++       +V  D++ +    
Sbjct: 395 YWPLEEAKLRRMPK-EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEA 453

Query: 141 TKQMLEEQ 148
               +  Q
Sbjct: 454 VAAEINGQ 461

Length = 676

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 49.0 bits (117), Expect = 1e-07
 Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHT 155
            L G++ L+TGA +GIGR +A+   +   +V +     +E+        ++E G      
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 156 YK 157
             
Sbjct: 62  VA 63

Length = 251

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 48.6 bits (117), Expect = 2e-07
 Identities = 17/55 (30%), Positives = 27/55 (49%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
            SL+G+  L+TGA  GIGR +A +       +V +D +E+        L   G +
Sbjct: 1   MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGE 55

Length = 246

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 46.4 bits (111), Expect = 9e-07
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 93  PPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLV 129
            P    L+  IIL+TGAG+GIGRE A  + +H  T++
Sbjct: 4   QPKPDLLKDRIILVTGAGDGIGREAALTYARHGATVI 40

Length = 247

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 18/53 (33%), Positives = 26/53 (49%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
            +  G++ L+TG   GIGR  A  F +    +V  D D  G  ET  ++ E G
Sbjct: 3   MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAG 55

Length = 253

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 44.9 bits (107), Expect = 4e-06
 Identities = 17/56 (30%), Positives = 32/56 (57%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIH 154
           L+G++ L+TGA +GIG E+A    +    +V  D++++      + L++ G K I 
Sbjct: 2   LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIG 57

Length = 258

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           L G++ L+TGA  GIG  +A+ F +    +   D+D          +    
Sbjct: 5   LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDV 55

Length = 260

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 44.2 bits (105), Expect = 6e-06
 Identities = 15/55 (27%), Positives = 24/55 (43%)

Query: 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIH 154
           E +IIL+TGA   IG+   K  +     L+  DI+     + K+ L       + 
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVI 55

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 4/44 (9%)

Query: 104 ILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQML 145
           I +TGA +GIGR  A  F     +V     DI+E G       L
Sbjct: 4   IFITGAASGIGRATALLFAAEGWRVGAY--DINEAGLAALAAEL 45

Length = 260

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYK 157
           SL+G+I L+TGA  GIG  +AK + +   T+V  DI+++  ++      E G    H Y 
Sbjct: 7   SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGI-EAHGYV 65

Length = 265

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 17/57 (29%), Positives = 25/57 (43%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHT 155
           L G + ++TGAG+GIGR  AK F +    +V  D D +        +   G      
Sbjct: 3   LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQ 59

Length = 252

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 14/46 (30%), Positives = 24/46 (52%)

Query: 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
            L+TGA +GIGR +A++  +    +V  D +E+   E   +    G
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGG 46

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 3/53 (5%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQG 149
           L G++ ++TGA  GIGR +A+   +   KV ++ +DI+E+   E  + ++E+G
Sbjct: 3   LMGKVAIVTGASGGIGRAIAELLAKEGAKV-VIAYDINEEAAQELLEEIKEEG 54

Length = 247

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 15/53 (28%), Positives = 27/53 (50%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
             LEG++ ++TGA +GIG  +A++F      +V  D +E+        +   G
Sbjct: 1   MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG 53

Length = 251

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY 150
           G++ L+TG  +GIG  +AK+       +V  DID       K     QG 
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDP--EIAEKVAEAAQGG 48

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 15/54 (27%), Positives = 26/54 (48%)

Query: 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIH 154
           G+  L+TGA +GIG  +A+        +V  D  E+G     ++  + G   I+
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIY 54

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 41.9 bits (99), Expect = 4e-05
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYK 157
           L+TGA  GIG  +A+   +    +   D + +   E    L   GY    TYK
Sbjct: 2   LVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYP-FATYK 53

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 41.5 bits (98), Expect = 5e-05
 Identities = 13/53 (24%), Positives = 26/53 (49%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           L+ ++I++TG   G+GR +A+   Q    L   D++++   E        G +
Sbjct: 3   LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTE 55

Length = 253

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 41.4 bits (98), Expect = 6e-05
 Identities = 11/48 (22%), Positives = 21/48 (43%)

Query: 94  PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
            +     G+ + +TGA  GIG  +A  FV+    ++ +D       + 
Sbjct: 1   MNAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDY 48

Length = 252

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 41.0 bits (96), Expect = 7e-05
 Identities = 17/55 (30%), Positives = 30/55 (54%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNI 153
           L+G+  ++TGAG GIG+E+A  F     ++V  DI+    N     +++ G +  
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAF 63

Length = 255

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 41.0 bits (97), Expect = 8e-05
 Identities = 14/50 (28%), Positives = 24/50 (48%)

Query: 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           ++ L+TGA  GIGR +A +       +   D  E+   ET + ++  G  
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGN 50

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 40.9 bits (96), Expect = 8e-05
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHT 155
           I +TGA +GIGRE A  F ++   +  +DIDE G      +  E G +N+  
Sbjct: 3   IFITGAASGIGRETALLFARNGWFVGLYDIDEDG---LAALAAELGAENVVA 51

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 40.7 bits (96), Expect = 9e-05
 Identities = 15/54 (27%), Positives = 23/54 (42%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           +L G+  L+TGA  G+G   A+   +   T+   D       E    LE  G +
Sbjct: 4   NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGR 57

Length = 250

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 17/54 (31%), Positives = 27/54 (50%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           SL G+ IL+TG+  GIG  LA    ++   ++  DI  +        L ++G K
Sbjct: 6   SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIK 59

Length = 254

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query: 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           G+++++TGA  GIGR LA +  +    LV    +E       Q L + G
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHG 49

Length = 263

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 1/54 (1%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVC-WDIDEKGNNETKQMLEEQG 149
             LEG+++++TG   G+GR +A +F + K  +V  +  DE+  N+  + +++ G
Sbjct: 3   SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAG 56

Length = 261

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 14/53 (26%), Positives = 24/53 (45%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           K   G++ ++TGA +G G   A+      + LV  D+ +   +     L  QG
Sbjct: 2   KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQG 54

Length = 287

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135
            L G+++ +TG   GIG   A+        +   D+DE
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDE 39

Length = 273

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137
           L G + ++TG G+GIG   A++      T+V  DID + 
Sbjct: 5   LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEA 43

Length = 255

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 94  PSEKSLEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYK 151
            S K L+G+  L+TG  +GIGR +A  F +    V +     +E    ETK+++EE+G K
Sbjct: 20  GSGK-LKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRK 78

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 12/25 (48%), Positives = 19/25 (76%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQ 123
           L G++ L+TG G+GIGR L ++F+ 
Sbjct: 4   LHGQVALITGGGSGIGRALVERFLA 28

Length = 263

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYK 157
            ++ ++TGA  GIGR +A++       +V  D++ E+    T Q + E GY N     
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGY-NAVAVG 58

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)

Query: 93  PPSEKSLEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDI-DEKGNNETKQMLEEQG 149
               + L G++ L+TG   GIG  + + F +H  KV +V  D+ D+ G N    +  E  
Sbjct: 10  SLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIV--DLQDDLGQNVCDSLGGEPN 67

Query: 150 YKNIH 154
               H
Sbjct: 68  VCFFH 72

Length = 280

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 16/43 (37%), Positives = 25/43 (58%)

Query: 94  PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136
           P   SL G+++++TGA  GIG ELA++       L   D++E 
Sbjct: 2   PPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEA 44

Length = 296

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 16/46 (34%), Positives = 30/46 (65%)

Query: 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           +++TGA +G+GR +A ++ +    L   D++E+G  ET ++L E G
Sbjct: 3   VMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAG 48

Length = 270

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 101 GEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHT 155
           G+++++TGA +GIG+E A++  +    V + C +  EKG     ++ +E G   +  
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNE-EKGEEAAAEIKKETGNAKVEV 56

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 14/37 (37%), Positives = 24/37 (64%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135
           L+G++ ++TG  +GIG   A+ F +H   +V  DID+
Sbjct: 2   LDGKVAIITGGASGIGEATARLFAKHGARVVIADIDD 38

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 38.7 bits (91), Expect = 4e-04
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 105 LLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIH 154
           L+TGA  GIGR +A +  +    ++      E+G  E  + L+  G K + 
Sbjct: 2   LVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALG 52

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 38.7 bits (91), Expect = 4e-04
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 5/62 (8%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYKNIH 154
           + LEG + L+TGA  GIGR +A +      +V +V  DI       T +++E  G K   
Sbjct: 2   RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVV--DICGDDAAATAELVEAAGGK-AR 58

Query: 155 TY 156
             
Sbjct: 59  AR 60

Length = 251

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 38.6 bits (90), Expect = 5e-04
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           L G+  L+TGA  GIG  +A+ F +H   L+  DI  +   +    L  +G++
Sbjct: 4   LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHR 55

Length = 263

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 38.4 bits (90), Expect = 5e-04
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQ 123
             L G  +L+TG  +GIG  LA++F++
Sbjct: 1   MKLTGNTVLITGGTSGIGLALARKFLE 27

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 38.4 bits (89), Expect = 6e-04
 Identities = 11/33 (33%), Positives = 20/33 (60%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLV 129
            +L  + IL+TGA  G+G ++AK +     T++
Sbjct: 2   ATLSDKTILVTGASQGLGEQVAKAYAAAGATVI 34

Length = 239

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 38.3 bits (90), Expect = 7e-04
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQG 149
           SL G + L+TGA  G+GR +A +  +    V +     DE+   E  + +E  G
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHY-RSDEEAAEELVEAVEALG 55

Length = 249

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 38.3 bits (89), Expect = 7e-04
 Identities = 17/51 (33%), Positives = 29/51 (56%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           L   IIL+TGA +GIGRE A  + ++  T++    +E+   +    + E+G
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEG 52

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 37.8 bits (88), Expect = 9e-04
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           K LE ++ ++TGA  GIG+  A    Q    ++  DI E   +ET   ++  G K
Sbjct: 2   KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAV-SETVDKIKSNGGK 55

Length = 272

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 38.0 bits (89), Expect = 9e-04
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDID 134
            +L+G++ L+TGA +GIG   A+   +   KV L     +
Sbjct: 2   TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREE 41

Length = 246

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 14/54 (25%), Positives = 25/54 (46%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY 150
             L+G++ LLTGA +GIG  +A++++     +V  DI           +     
Sbjct: 2   MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAI 55

Length = 257

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 37.8 bits (88), Expect = 0.001
 Identities = 13/49 (26%), Positives = 27/49 (55%)

Query: 105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNI 153
           L+TG   GIG+ +A++  +    +   D++E+   ET + + + G K +
Sbjct: 4   LVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAV 52

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 38.0 bits (89), Expect = 0.001
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTY 156
           L G+++L+TGA +GIGR  A +  +    V LV  + +    +E    +  +G    H Y
Sbjct: 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEAL--DELVAEIRAKGGT-AHAY 425

Length = 657

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 37.5 bits (88), Expect = 0.001
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYK 151
            SLEG++ L+TGA  GIGR +A++       V +      E G       +   G K
Sbjct: 1   MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINY-ASSEAGAEALVAEIGALGGK 56

Length = 248

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 37.6 bits (87), Expect = 0.001
 Identities = 14/52 (26%), Positives = 25/52 (48%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY 150
           L+G+  L+TG+  GIGR  A+ +V+    +   DI+ +    T   +     
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAAC 52

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 18/58 (31%), Positives = 31/58 (53%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHT 155
            L+G+ IL+TGAG  IG  L K  ++    ++  DID++  NE  + L ++      +
Sbjct: 1   MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLS 58

Length = 256

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 37.5 bits (87), Expect = 0.001
 Identities = 14/46 (30%), Positives = 25/46 (54%)

Query: 102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE 147
           +++L+TG G+G+G   A +  +    L   D++E+G    K  L E
Sbjct: 4   KVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLE 49

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK 142
           ++TG  +GIG   AK  ++    +   D +E      +
Sbjct: 4   IITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAE 41

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 37.2 bits (87), Expect = 0.001
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLV 129
            L G++ ++TGA +GIGR  AK F +    +V
Sbjct: 3   RLNGKVAIITGASSGIGRAAAKLFAREGAKVV 34

Length = 254

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 13/24 (54%), Positives = 20/24 (83%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFV 122
           L+GE+ L+TG G+G+GR L ++FV
Sbjct: 2   LKGEVALITGGGSGLGRALVERFV 25

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 37.0 bits (86), Expect = 0.002
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQ 123
              G  IL+TG  +GIG  LAK+F++
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLE 27

Length = 245

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 37.0 bits (86), Expect = 0.002
 Identities = 17/52 (32%), Positives = 31/52 (59%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           SL+G++ L+TGA  GIG  +A    +    +V    +E+   E +Q++E++G
Sbjct: 2   SLKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEG 53

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 13/53 (24%), Positives = 25/53 (47%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           K +  +++++TGA  G+GR  A+ F +    +V     E+G       +   G
Sbjct: 4   KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAG 56

Length = 334

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 5/50 (10%)

Query: 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           +G++ L+T A  GIGR +A  F +    ++  DI     NE K    E+G
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIATDI-----NEEKLKELERG 45

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 36.7 bits (85), Expect = 0.002
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID 134
           LEG++ ++TGAG GIG   A +  +    +V  DID
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADID 36

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 36.6 bits (85), Expect = 0.003
 Identities = 14/45 (31%), Positives = 18/45 (40%)

Query: 105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
            +TGA +GIGR  A +       L   D D  G  +T       G
Sbjct: 4   FVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG 48

Length = 272

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 36.4 bits (85), Expect = 0.003
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLV 129
            ++G+++L+TGA  GIGR   +Q +      V
Sbjct: 3   DIKGKVVLVTGANRGIGRAFVEQLLARGAAKV 34

Length = 238

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 36.5 bits (85), Expect = 0.003
 Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 2/60 (3%)

Query: 95  SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN-NETKQMLEEQGYKNI 153
           S K L+G++ L+TG  +GIGR +A  F +    +    +DE  + NETKQ +E++G K +
Sbjct: 41  SGK-LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCL 99

Length = 290

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 36.3 bits (84), Expect = 0.003
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNI 153
            L+G++  +TGAG+GIG+ +A    Q    +  +D+  + G  ET + +E  G + I
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAI 61

Length = 254

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 36.1 bits (84), Expect = 0.003
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 11/53 (20%)

Query: 101 GEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           G+ +L+TG  +GIG+ LAK+ V+    V +V           ++  LEE   +
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIV---------ARSESKLEEAVEE 44

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 36.0 bits (84), Expect = 0.003
 Identities = 11/26 (42%), Positives = 18/26 (69%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQH 124
           L+G++  +TG G GIG+ +AK F + 
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAEL 26

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 36.2 bits (84), Expect = 0.004
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI 133
           L+G ++++TGAG GIGR  A  F      +V  DI
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDI 38

Length = 286

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 36.1 bits (84), Expect = 0.004
 Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 3/45 (6%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI---DEKGNN 139
           +L+G+II++TG  +GIG  + K+ + +   +V  DI   D +  N
Sbjct: 6   NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHEN 50

Length = 266

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	159
KOG1201|consensus	300		99.51
KOG1014|consensus	312		99.32
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.3
PLN02780	320	ketoreductase/ oxidoreductase	99.21
KOG1205|consensus	282		99.14
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.14
PRK08862	227	short chain dehydrogenase; Provisional	99.09
PRK07478	254	short chain dehydrogenase; Provisional	99.08
PRK05876	275	short chain dehydrogenase; Provisional	99.08
PRK05854	313	short chain dehydrogenase; Provisional	99.07
PRK05867	253	short chain dehydrogenase; Provisional	99.07
PRK08303	305	short chain dehydrogenase; Provisional	99.06
KOG0725|consensus	270		99.05
PRK08339	263	short chain dehydrogenase; Provisional	99.04
PRK08589	272	short chain dehydrogenase; Validated	99.04
PRK06139	330	short chain dehydrogenase; Provisional	99.01
KOG1208|consensus	314		99.01
PRK07063	260	short chain dehydrogenase; Provisional	99.0
PRK05866	293	short chain dehydrogenase; Provisional	98.99
PRK06194	287	hypothetical protein; Provisional	98.99
PRK06114	254	short chain dehydrogenase; Provisional	98.99
PRK07523	255	gluconate 5-dehydrogenase; Provisional	98.98
PRK07791	286	short chain dehydrogenase; Provisional	98.97
PRK07035	252	short chain dehydrogenase; Provisional	98.96
PRK08085	254	gluconate 5-dehydrogenase; Provisional	98.96
PRK07109	334	short chain dehydrogenase; Provisional	98.96
PRK07062	265	short chain dehydrogenase; Provisional	98.95
PRK08277	278	D-mannonate oxidoreductase; Provisional	98.94
PRK08265	261	short chain dehydrogenase; Provisional	98.93
PRK06197	306	short chain dehydrogenase; Provisional	98.93
PRK06124	256	gluconate 5-dehydrogenase; Provisional	98.92
PRK07890	258	short chain dehydrogenase; Provisional	98.92
PRK06720	169	hypothetical protein; Provisional	98.91
PRK07097	265	gluconate 5-dehydrogenase; Provisional	98.91
PRK06172	253	short chain dehydrogenase; Provisional	98.91
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	98.91
PRK07453	322	protochlorophyllide oxidoreductase; Validated	98.91
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	98.9
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	98.9
PRK07774	250	short chain dehydrogenase; Provisional	98.89
PRK08278	273	short chain dehydrogenase; Provisional	98.89
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	98.89
PRK05872	296	short chain dehydrogenase; Provisional	98.89
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	98.87
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	98.87
PRK07576	264	short chain dehydrogenase; Provisional	98.87
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.87
PRK08628	258	short chain dehydrogenase; Provisional	98.86
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	98.85
PRK08703	239	short chain dehydrogenase; Provisional	98.85
PRK12939	250	short chain dehydrogenase; Provisional	98.85
PRK07814	263	short chain dehydrogenase; Provisional	98.85
PRK07904	253	short chain dehydrogenase; Provisional	98.85
PRK08643	256	acetoin reductase; Validated	98.84
PRK09242	257	tropinone reductase; Provisional	98.83
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.83
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	98.83
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	98.83
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	98.82
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	98.81
PRK07677	252	short chain dehydrogenase; Provisional	98.81
PLN02253	280	xanthoxin dehydrogenase	98.81
PRK12747	252	short chain dehydrogenase; Provisional	98.81
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	98.81
PRK06949	258	short chain dehydrogenase; Provisional	98.8
PRK08226	263	short chain dehydrogenase; Provisional	98.8
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	98.8
PRK07806	248	short chain dehydrogenase; Provisional	98.79
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	98.79
PRK09072	263	short chain dehydrogenase; Provisional	98.79
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	98.79
PRK06128	300	oxidoreductase; Provisional	98.79
PRK06125	259	short chain dehydrogenase; Provisional	98.79
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.78
PRK08213	259	gluconate 5-dehydrogenase; Provisional	98.78
PRK06138	252	short chain dehydrogenase; Provisional	98.78
PRK05717	255	oxidoreductase; Validated	98.78
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.78
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	98.77
PRK05599	246	hypothetical protein; Provisional	98.77
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.77
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	98.77
PRK12746	254	short chain dehydrogenase; Provisional	98.77
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	98.76
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.76
PRK07985	294	oxidoreductase; Provisional	98.76
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	98.76
PRK07067	257	sorbitol dehydrogenase; Provisional	98.75
PRK07454	241	short chain dehydrogenase; Provisional	98.75
PRK07024	257	short chain dehydrogenase; Provisional	98.75
PRK08251	248	short chain dehydrogenase; Provisional	98.74
PRK08936	261	glucose-1-dehydrogenase; Provisional	98.74
PRK06500	249	short chain dehydrogenase; Provisional	98.74
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	98.73
PRK07825	273	short chain dehydrogenase; Provisional	98.73
PRK08340	259	glucose-1-dehydrogenase; Provisional	98.73
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.72
PRK09186	256	flagellin modification protein A; Provisional	98.72
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.72
PRK06701	290	short chain dehydrogenase; Provisional	98.71
PRK05855	582	short chain dehydrogenase; Validated	98.71
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	98.71
PRK07201	657	short chain dehydrogenase; Provisional	98.71
PRK07326	237	short chain dehydrogenase; Provisional	98.71
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	98.7
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	98.7
PRK05650	270	short chain dehydrogenase; Provisional	98.7
PRK12743	256	oxidoreductase; Provisional	98.7
PRK06198	260	short chain dehydrogenase; Provisional	98.7
PRK07775	274	short chain dehydrogenase; Provisional	98.7
PRK09134	258	short chain dehydrogenase; Provisional	98.69
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	98.69
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.69
PRK12935	247	acetoacetyl-CoA reductase; Provisional	98.69
PRK07831	262	short chain dehydrogenase; Provisional	98.68
PRK07102	243	short chain dehydrogenase; Provisional	98.68
PRK12938	246	acetyacetyl-CoA reductase; Provisional	98.68
PRK06196	315	oxidoreductase; Provisional	98.67
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	98.67
PRK06914	280	short chain dehydrogenase; Provisional	98.67
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.66
KOG1200|consensus	256		98.66
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	98.66
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	98.66
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	98.65
PRK06940	275	short chain dehydrogenase; Provisional	98.65
PRK12937	245	short chain dehydrogenase; Provisional	98.64
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	98.64
PRK07856	252	short chain dehydrogenase; Provisional	98.62
PRK12828	239	short chain dehydrogenase; Provisional	98.61
PRK12744	257	short chain dehydrogenase; Provisional	98.61
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.6
PRK12827	249	short chain dehydrogenase; Provisional	98.6
PRK09291	257	short chain dehydrogenase; Provisional	98.6
PRK06181	263	short chain dehydrogenase; Provisional	98.6
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	98.59
TIGR02415	254	23BDH acetoin reductases. One member of this famil	98.59
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.59
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.58
PRK05875	276	short chain dehydrogenase; Provisional	98.58
PRK09135	249	pteridine reductase; Provisional	98.58
PRK08267	260	short chain dehydrogenase; Provisional	98.58
PRK07832	272	short chain dehydrogenase; Provisional	98.57
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	98.57
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	98.56
PRK06484	520	short chain dehydrogenase; Validated	98.56
PRK06123	248	short chain dehydrogenase; Provisional	98.56
PRK06947	248	glucose-1-dehydrogenase; Provisional	98.55
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.55
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.55
PRK06101	240	short chain dehydrogenase; Provisional	98.54
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.53
PRK06484	520	short chain dehydrogenase; Validated	98.53
PRK12829	264	short chain dehydrogenase; Provisional	98.53
PRK07074	257	short chain dehydrogenase; Provisional	98.53
PRK06057	255	short chain dehydrogenase; Provisional	98.52
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	98.51
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	98.5
PRK12742	237	oxidoreductase; Provisional	98.5
PRK06841	255	short chain dehydrogenase; Provisional	98.49
PRK08264	238	short chain dehydrogenase; Validated	98.48
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.48
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	98.47
PLN00015	308	protochlorophyllide reductase	98.47
PRK06523	260	short chain dehydrogenase; Provisional	98.46
COG1028	251	FabG Dehydrogenases with different specificities (	98.45
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.45
PRK06182	273	short chain dehydrogenase; Validated	98.44
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	98.44
KOG4169|consensus	261		98.43
PRK05993	277	short chain dehydrogenase; Provisional	98.43
PRK08263	275	short chain dehydrogenase; Provisional	98.43
PRK06180	277	short chain dehydrogenase; Provisional	98.43
PRK06924	251	short chain dehydrogenase; Provisional	98.42
PRK06483	236	dihydromonapterin reductase; Provisional	98.42
PRK06398	258	aldose dehydrogenase; Validated	98.4
KOG1199|consensus	260		98.38
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.37
PRK10538	248	malonic semialdehyde reductase; Provisional	98.37
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	98.37
PRK08324	681	short chain dehydrogenase; Validated	98.36
PRK07060	245	short chain dehydrogenase; Provisional	98.36
PRK07041	230	short chain dehydrogenase; Provisional	98.34
PLN03209	576	translocon at the inner envelope of chloroplast su	98.33
PRK12367	245	short chain dehydrogenase; Provisional	98.31
PRK12824	245	acetoacetyl-CoA reductase; Provisional	98.3
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	98.3
PRK06482	276	short chain dehydrogenase; Provisional	98.29
KOG1210|consensus	331		98.27
PRK07069	251	short chain dehydrogenase; Validated	98.27
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.27
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.27
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	98.25
PRK06179	270	short chain dehydrogenase; Provisional	98.24
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	98.23
PRK08177	225	short chain dehydrogenase; Provisional	98.21
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	98.2
KOG1207|consensus	245		98.18
PRK07023	243	short chain dehydrogenase; Provisional	98.18
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	98.17
PLN02583	297	cinnamoyl-CoA reductase	98.17
PRK08017	256	oxidoreductase; Provisional	98.14
KOG1478|consensus	341		98.13
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	98.13
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.1
PRK05693	274	short chain dehydrogenase; Provisional	98.09
PLN02653	340	GDP-mannose 4,6-dehydratase	98.09
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.09
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.08
PRK05884	223	short chain dehydrogenase; Provisional	98.07
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	98.06
PLN02896	353	cinnamyl-alcohol dehydrogenase	97.99
KOG1610|consensus	322		97.99
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.97
PRK07577	234	short chain dehydrogenase; Provisional	97.96
PRK08219	227	short chain dehydrogenase; Provisional	97.94
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	97.94
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.94
PRK06953	222	short chain dehydrogenase; Provisional	97.92
PRK08309	177	short chain dehydrogenase; Provisional	97.91
PLN02240	352	UDP-glucose 4-epimerase	97.89
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	97.86
PLN02214	342	cinnamoyl-CoA reductase	97.84
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	97.84
PLN02686	367	cinnamoyl-CoA reductase	97.83
KOG1209|consensus	289		97.81
PLN02572	442	UDP-sulfoquinovose synthase	97.8
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.77
PLN02650	351	dihydroflavonol-4-reductase	97.77
PLN00198	338	anthocyanidin reductase; Provisional	97.76
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	97.75
KOG1611|consensus	249		97.74
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	97.74
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	97.61
PRK10675	338	UDP-galactose-4-epimerase; Provisional	97.52
KOG1502|consensus	327		97.5
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.47
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	97.44
TIGR01746	367	Thioester-redct thioester reductase domain. It has	97.36
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.35
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	97.34
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	97.32
PRK09009	235	C factor cell-cell signaling protein; Provisional	97.3
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.29
PRK07578	199	short chain dehydrogenase; Provisional	97.28
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	97.27
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.25
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.22
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.18
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	97.15
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.11
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	97.07
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	97.06
KOG1371|consensus	343		97.06
PRK14982	340	acyl-ACP reductase; Provisional	97.05
PLN02427	386	UDP-apiose/xylose synthase	97.05
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.05
PLN02778	298	3,5-epimerase/4-reductase	97.02
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	96.92
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	96.79
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	96.79
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.78
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.76
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	96.73
PLN00016	378	RNA-binding protein; Provisional	96.63
CHL00194	317	ycf39 Ycf39; Provisional	96.6
PLN02206	442	UDP-glucuronate decarboxylase	96.55
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	96.53
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	96.49
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.43
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.42
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	96.42
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.34
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	96.33
PLN02166	436	dTDP-glucose 4,6-dehydratase	96.31
PLN02695	370	GDP-D-mannose-3',5'-epimerase	96.31
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.27
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	96.18
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	96.15
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	96.13
PLN02260	668	probable rhamnose biosynthetic enzyme	96.1
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	96.07
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.03
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	95.94
PRK07201	657	short chain dehydrogenase; Provisional	95.87
PRK09620	229	hypothetical protein; Provisional	95.84
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.82
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.8
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.8
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.75
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	95.63
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	95.46
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	95.43
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	95.35
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.13
KOG1430|consensus	361		95.08
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.04
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.99
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	94.99
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.98
PRK06849	389	hypothetical protein; Provisional	94.95
PRK05865	854	hypothetical protein; Provisional	94.93
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	94.84
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	94.83
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	94.82
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	94.81
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	94.78
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	94.7
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	94.57
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	94.53
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	94.51
PRK13940	414	glutamyl-tRNA reductase; Provisional	94.47
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	94.47
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	94.46
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	94.39
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	94.38
PRK12320	699	hypothetical protein; Provisional	94.38
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	94.36
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	94.35
PRK04148	134	hypothetical protein; Provisional	94.3
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	94.27
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	94.27
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	94.24
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	94.22
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.21
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	94.2
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	94.18
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.16
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.13
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.1
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.08
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	93.97
PLN02260	668	probable rhamnose biosynthetic enzyme	93.9
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	93.89
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.86
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.81
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.75
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	93.75
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.72
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	93.72
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	93.72
PLN02503	605	fatty acyl-CoA reductase 2	93.71
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.65
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.63
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	93.61
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	93.54
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.53
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.52
PRK08655	437	prephenate dehydrogenase; Provisional	93.5
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	93.48
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.47
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	93.44
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.41
PRK08306	296	dipicolinate synthase subunit A; Reviewed	93.35
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	93.29
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	93.26
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.24
KOG1203|consensus	411		93.22
PTZ00075	476	Adenosylhomocysteinase; Provisional	93.14
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.14
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.08
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.06
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	93.05
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	92.91
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	92.89
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	92.88
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	92.87
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.86
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.81
PLN02996	491	fatty acyl-CoA reductase	92.81
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.79
PRK10669	558	putative cation:proton antiport protein; Provision	92.73
PRK14968	188	putative methyltransferase; Provisional	92.65
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	92.63
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	92.63
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.61
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	92.56
PRK13243	333	glyoxylate reductase; Reviewed	92.56
KOG1204|consensus	253		92.54
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	92.53
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	92.43
PLN02494	477	adenosylhomocysteinase	92.42
COG4982	866	3-oxoacyl-[acyl-carrier protein]	92.38
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	92.38
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	92.38
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.36
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	92.34
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	92.3
COG0569	225	TrkA K+ transport systems, NAD-binding component [	92.29
KOG1429|consensus	350		92.19
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	92.18
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.13
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	92.12
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	92.05
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	92.01
COG0190	283	FolD 5,10-methylene-tetrahydrofolate dehydrogenase	91.98
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	91.97
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	91.96
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	91.96
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	91.91
PRK06719	157	precorrin-2 dehydrogenase; Validated	91.88
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	91.87
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	91.83
PLN00203	519	glutamyl-tRNA reductase	91.8
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	91.77
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	91.7
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	91.7
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	91.67
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	91.65
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	91.65
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	91.63
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	91.57
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.54
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	91.49
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	91.42
PLN02928	347	oxidoreductase family protein	91.34
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	91.24
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	91.18
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.13
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	91.12
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	91.08
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.06
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	91.05
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	90.98
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	90.97
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	90.86
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	90.75
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	90.69
TIGR01968	261	minD_bact septum site-determining protein MinD. Th	90.67
TIGR03018	207	pepcterm_TyrKin exopolysaccharide/PEPCTERM locus t	90.66
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	90.64
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	90.6
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	90.59
PRK09496	453	trkA potassium transporter peripheral membrane com	90.54
PRK09496	453	trkA potassium transporter peripheral membrane com	90.44
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	90.38
PTZ00354	334	alcohol dehydrogenase; Provisional	90.27
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	90.24
PRK12480	330	D-lactate dehydrogenase; Provisional	90.23
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	90.21
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	90.11
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	90.1
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	90.1
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	90.09
PRK14168	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.05
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	90.03
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	90.02
KOG0025|consensus	354		90.0
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	89.95
PRK03562	621	glutathione-regulated potassium-efflux system prot	89.9
PRK13771	334	putative alcohol dehydrogenase; Provisional	89.82
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	89.8
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	89.78
PRK15116	268	sulfur acceptor protein CsdL; Provisional	89.71
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	89.7
PRK14174	295	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.69
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	89.67
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	89.63
PF03848	192	TehB: Tellurite resistance protein TehB; InterPro:	89.63
CHL00175	281	minD septum-site determining protein; Validated	89.6
PLN03139	386	formate dehydrogenase; Provisional	89.59
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.54
PRK06932	314	glycerate dehydrogenase; Provisional	89.45
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	89.42
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	89.33
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	89.28
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.27
PLN02586	360	probable cinnamyl alcohol dehydrogenase	89.08
PRK13255	218	thiopurine S-methyltransferase; Reviewed	89.06
PRK03659	601	glutathione-regulated potassium-efflux system prot	89.05
TIGR01969	251	minD_arch cell division ATPase MinD, archaeal. Thi	88.95
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	88.93
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	88.83
PRK07574	385	formate dehydrogenase; Provisional	88.72
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	88.62
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	88.62
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	88.62
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	88.61
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	88.6
PLN02740	381	Alcohol dehydrogenase-like	88.52
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	88.45
PRK11207	197	tellurite resistance protein TehB; Provisional	88.37
cd08252	336	AL_MDR Arginate lyase and other MDR family members	88.36
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	88.28
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	88.24
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	88.22
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	88.2
PRK06487	317	glycerate dehydrogenase; Provisional	88.2
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	88.1
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	88.04
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	88.01
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	87.96
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	87.96
TIGR03815	322	CpaE_hom_Actino helicase/secretion neighborhood Cp	87.95
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	87.87
PF01656	195	CbiA: CobQ/CobB/MinD/ParA nucleotide binding domai	87.78
TIGR01007	204	eps_fam capsular exopolysaccharide family. This mo	87.78
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	87.76
PRK06436	303	glycerate dehydrogenase; Provisional	87.76
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	87.74

>KOG1201|consensus

Probab=99.51  E-value=1.7e-13  Score=112.69  Aligned_cols=89  Identities=40%  Similarity=0.715  Sum_probs=77.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc
Q psy2040          69 LSELILLIIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ  148 (159)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~  148 (159)
                      +..++.+....++.++...+..+.+.+.++..|++++||||++|+|+++|.++|++|++++++|.|.+..+++++++++.
T Consensus         6 ~~~~l~~~~~~~~~~~~s~~~~~l~~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~   85 (300)
T KOG1201|consen    6 LLILLLLLTLLLLALLESLIKLLLPKPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI   85 (300)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc
Confidence            44445555566666666677777788888999999999999999999999999999999999999999999999999988


Q ss_pred             CCCeEEEEecC
Q psy2040         149 GYKNIHTYKRS  159 (159)
Q Consensus       149 g~~~v~~~~~D  159 (159)
                      | + ++++.||
T Consensus        86 g-~-~~~y~cd   94 (300)
T KOG1201|consen   86 G-E-AKAYTCD   94 (300)
T ss_pred             C-c-eeEEEec
Confidence            6 7 9999998

>KOG1014|consensus

Probab=99.32  E-value=1.4e-11  Score=101.86  Aligned_cols=61  Identities=18%  Similarity=0.305  Sum_probs=54.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      +-.|+|++|||++.|||++.|++||++|.+|++++|++++++++++||+++ +.+ +..+.+|
T Consensus        46 ~~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~ve-v~~i~~D  107 (312)
T KOG1014|consen   46 EKLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVE-VRIIAID  107 (312)
T ss_pred             HhcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcE-EEEEEEe
Confidence            344699999999999999999999999999999999999999999999876 445 7777776

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.30  E-value=6e-12  Score=102.70  Aligned_cols=62  Identities=29%  Similarity=0.451  Sum_probs=57.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      ..+++++++|||+|+|||+++|++|+++|++|++++|+++++++++++++.+ +.+ +..+++|
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~-v~vi~~D   64 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVE-VEVIPAD   64 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCce-EEEEECc
Confidence            3467899999999999999999999999999999999999999999999876 466 8888887

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.21  E-value=1.3e-10  Score=96.66  Aligned_cols=59  Identities=22%  Similarity=0.298  Sum_probs=52.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D  159 (159)
                      .|++++||||++|||+++|++|+++|++|++++|++++++++.+++++..  .+ +..+++|
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~-~~~~~~D  112 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQ-IKTVVVD  112 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcE-EEEEEEE
Confidence            58999999999999999999999999999999999999999999987653  34 6666665

>KOG1205|consensus

Probab=99.14  E-value=7.5e-11  Score=97.00  Aligned_cols=66  Identities=23%  Similarity=0.337  Sum_probs=58.9

Q ss_pred             CCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCe-EEEEecC
Q psy2040          94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKN-IHTYKRS  159 (159)
Q Consensus        94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~-v~~~~~D  159 (159)
                      ..+..+.||+++|||+|+|||.++|++|+++|++++++.|..++++++.+++++.+..+ ++.+++|
T Consensus         5 ~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~D   71 (282)
T KOG1205|consen    5 LFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLD   71 (282)
T ss_pred             ccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCc
Confidence            34567899999999999999999999999999999999999999999999998876543 7888887

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.14  E-value=9.5e-11  Score=94.24  Aligned_cols=60  Identities=20%  Similarity=0.275  Sum_probs=53.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..+.+|+++|||+|+|||.++|++|+++|++|++.+|++++++++++++.+  .+ +.....|
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~-~~~~~~D   61 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GA-ALALALD   61 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--Cc-eEEEeec
Confidence            456789999999999999999999999999999999999999999999975  44 5666555

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.09  E-value=3.3e-10  Score=89.74  Aligned_cols=61  Identities=23%  Similarity=0.388  Sum_probs=55.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||+++|||+++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +..+++|
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~-~~~~~~D   62 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDN-VYSFQLK   62 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCC-eEEEEcc
Confidence            467999999999999999999999999999999999999999999888877777 7778776

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.08  E-value=4.4e-10  Score=89.18  Aligned_cols=62  Identities=23%  Similarity=0.349  Sum_probs=55.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++++|+++||||++|||++++++|+++|++|++.+|++++++++.+++++.+.+ +..+.+|
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   63 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGE-AVALAGD   63 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcC
Confidence            4567899999999999999999999999999999999998888888888877777 7788776

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.08  E-value=3.8e-10  Score=91.51  Aligned_cols=63  Identities=22%  Similarity=0.427  Sum_probs=56.5

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |..+++|+++|||+++|||+++|++|+++|++|++++|+++++++..+++++.+.+ +..+++|
T Consensus         1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~-~~~~~~D   63 (275)
T PRK05876          1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFD-VHGVMCD   63 (275)
T ss_pred             CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEeCC
Confidence            45678999999999999999999999999999999999998888888888877777 7788877

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.07  E-value=4.5e-10  Score=92.82  Aligned_cols=64  Identities=16%  Similarity=0.216  Sum_probs=55.9

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D  159 (159)
                      .+.+++||+++||||++|||+++|++|+++|++|++++|++++.++..+++++..  .+ +.++++|
T Consensus         8 ~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~-v~~~~~D   73 (313)
T PRK05854          8 TVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAK-LSLRALD   73 (313)
T ss_pred             cCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCc-eEEEEec
Confidence            4567889999999999999999999999999999999999998888888887653  35 7778877

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.07  E-value=4.8e-10  Score=89.06  Aligned_cols=62  Identities=21%  Similarity=0.265  Sum_probs=55.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++|||+++|||.+++++|+++|++|++++|+.++.++..+++++.+.+ +..+++|
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   66 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGK-VVPVCCD   66 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCe-EEEEEcc
Confidence            3578999999999999999999999999999999999998889988888877776 7777776

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.06  E-value=6.7e-10  Score=91.80  Aligned_cols=63  Identities=22%  Similarity=0.291  Sum_probs=54.0

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC----------ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE----------KGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~----------~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |.+++||+++||||++|||+++|++|+++|++|++++|+.          ++++++.+++++.+.+ +..+++|
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~D   75 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGR-GIAVQVD   75 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCc-eEEEEcC
Confidence            4567899999999999999999999999999999999973          4566777778777777 7788887

>KOG0725|consensus

Probab=99.05  E-value=6.9e-10  Score=90.82  Aligned_cols=63  Identities=27%  Similarity=0.336  Sum_probs=55.6

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC---CCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG---YKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g---~~~v~~~~~D  159 (159)
                      +..+.||+++|||+++|||+++|++|++.|++|++++|++++++++.++++..+   .+ +..+.||
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   68 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGK-VLAIVCD   68 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCe-eEEEECc
Confidence            356889999999999999999999999999999999999999999988887654   34 7777776

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.04  E-value=6.4e-10  Score=89.43  Aligned_cols=61  Identities=13%  Similarity=0.307  Sum_probs=53.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      +++||+++|||+++|||+++|++|+++|++|++++|+.+++++..+++++. +.+ +..+++|
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   66 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVD-VSYIVAD   66 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCc-eEEEEec
Confidence            478999999999999999999999999999999999988888888888664 456 7788877

>PRK08589 short chain dehydrogenase; Validated

Probab=99.04  E-value=7.3e-10  Score=89.30  Aligned_cols=61  Identities=30%  Similarity=0.453  Sum_probs=54.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|+ +++++..+++++.+.+ +..+++|
T Consensus         2 ~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~-~~~~~~D   62 (272)
T PRK08589          2 KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGK-AKAYHVD   62 (272)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCe-EEEEEee
Confidence            35679999999999999999999999999999999999 7788888888777777 7888876

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.01  E-value=7.9e-10  Score=92.50  Aligned_cols=62  Identities=24%  Similarity=0.388  Sum_probs=56.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++.+|+++|||+++|||+++|++|+++|++|++++|++++++++.+++++.|.+ +..+.+|
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~-~~~~~~D   64 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAE-VLVVPTD   64 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEee
Confidence            4577899999999999999999999999999999999999999999999888877 7777776

>KOG1208|consensus

Probab=99.01  E-value=1.2e-09  Score=91.30  Aligned_cols=64  Identities=27%  Similarity=0.368  Sum_probs=56.5

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D  159 (159)
                      ...++.|++++|||+++|||+++|++|+++|++|++.+||.++.+++++++++..  .+ +.++++|
T Consensus        29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~-i~~~~lD   94 (314)
T KOG1208|consen   29 HGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQK-IRVIQLD   94 (314)
T ss_pred             ccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCc-eEEEECC
Confidence            3456789999999999999999999999999999999999999999999998743  33 6778887

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.00  E-value=1.2e-09  Score=86.87  Aligned_cols=62  Identities=23%  Similarity=0.435  Sum_probs=54.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH--cCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE--QGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~--~g~~~v~~~~~D  159 (159)
                      .++++|+++|||+++|||+++|++|+++|++|++++|++++.++..+++++  .+.+ +..+++|
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D   66 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGAR-VLAVPAD   66 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCce-EEEEEcc
Confidence            356799999999999999999999999999999999999888888888876  3555 7777776

>PRK05866 short chain dehydrogenase; Provisional

Probab=98.99  E-value=1.4e-09  Score=89.08  Aligned_cols=63  Identities=29%  Similarity=0.344  Sum_probs=56.1

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ...+.+|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++++.+.+ +..+++|
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~-~~~~~~D   97 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGD-AMAVPCD   97 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence            34577899999999999999999999999999999999998888888888777777 7788776

>PRK06194 hypothetical protein; Provisional

Probab=98.99  E-value=1.5e-09  Score=87.58  Aligned_cols=62  Identities=23%  Similarity=0.370  Sum_probs=54.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..++++..+.+ +..+++|
T Consensus         2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   63 (287)
T PRK06194          2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAE-VLGVRTD   63 (287)
T ss_pred             cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCe-EEEEECC
Confidence            4567899999999999999999999999999999999988888888888776766 7778776

>PRK06114 short chain dehydrogenase; Provisional

Probab=98.99  E-value=2.1e-09  Score=85.48  Aligned_cols=64  Identities=27%  Similarity=0.467  Sum_probs=54.9

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc-cHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK-GNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~-~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++.++++|+++|||+++|||+++|++|+++|++|++.+|+.+ ..++..+++++.+.+ +..+++|
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~-~~~~~~D   66 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRR-AIQIAAD   66 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCc-eEEEEcC
Confidence            456788999999999999999999999999999999999764 467777888777777 7777776

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=98.98  E-value=1.9e-09  Score=85.60  Aligned_cols=63  Identities=25%  Similarity=0.308  Sum_probs=55.7

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.++++|+++|||+++|||+++|++|+++|++|++.+|++++.++..+++++.|.+ +..+++|
T Consensus         5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~-~~~~~~D   67 (255)
T PRK07523          5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLS-AHALAFD   67 (255)
T ss_pred             ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCce-EEEEEcc
Confidence            34578999999999999999999999999999999999988888888888777777 7778776

>PRK07791 short chain dehydrogenase; Provisional

Probab=98.97  E-value=2.1e-09  Score=87.59  Aligned_cols=62  Identities=26%  Similarity=0.392  Sum_probs=53.8

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC---------ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE---------KGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~---------~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..+++|+++||||++|||+++|++|+++|++|++++++.         +.+++..+++++.+.+ +..+++|
T Consensus         2 ~~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~D   72 (286)
T PRK07791          2 GLLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGE-AVANGDD   72 (286)
T ss_pred             CccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCc-eEEEeCC
Confidence            346799999999999999999999999999999998876         6677888888877777 7788777

>PRK07035 short chain dehydrogenase; Provisional

Probab=98.96  E-value=2.3e-09  Score=84.83  Aligned_cols=62  Identities=26%  Similarity=0.358  Sum_probs=54.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++.+.+.+ ...+++|
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   65 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGK-AEALACH   65 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEEcC
Confidence            4678899999999999999999999999999999999988888888888777766 7777776

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=98.96  E-value=2.3e-09  Score=85.06  Aligned_cols=62  Identities=29%  Similarity=0.378  Sum_probs=55.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||++++++|+++|++|++.+|+++++++..++++..+.+ +..+.+|
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   66 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIK-AHAAPFN   66 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCe-EEEEecC
Confidence            4578999999999999999999999999999999999988888888888777766 7777776

>PRK07109 short chain dehydrogenase; Provisional

Probab=98.96  E-value=2.1e-09  Score=89.86  Aligned_cols=62  Identities=21%  Similarity=0.373  Sum_probs=56.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||++++++|+++|++|++++|+++++++..+++++.|.+ +..+++|
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~-~~~v~~D   65 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGE-ALAVVAD   65 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEEec
Confidence            4577899999999999999999999999999999999998899999999888887 8888887

>PRK07062 short chain dehydrogenase; Provisional

Probab=98.95  E-value=2.6e-09  Score=85.26  Aligned_cols=62  Identities=19%  Similarity=0.303  Sum_probs=53.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++..  .+ +..+++|
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D   67 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGAR-LLAARCD   67 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCce-EEEEEec
Confidence            35789999999999999999999999999999999999988888888887653  35 6677776

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=98.94  E-value=3e-09  Score=85.55  Aligned_cols=62  Identities=19%  Similarity=0.341  Sum_probs=55.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++|||+++|||++++++|+++|++|++.+|+++..++..+++++.+.+ +..+++|
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   67 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGE-ALAVKAD   67 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEECC
Confidence            3578999999999999999999999999999999999988888888888777777 7888877

>PRK08265 short chain dehydrogenase; Provisional

Probab=98.93  E-value=3.1e-09  Score=85.07  Aligned_cols=60  Identities=22%  Similarity=0.330  Sum_probs=50.2

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |.++++|+++|||+++|||+++|++|+++|++|++++|++++.++..+++   +.+ +.++++|
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   60 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GER-ARFIATD   60 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCe-eEEEEec
Confidence            34578999999999999999999999999999999999987777666554   445 6677776

>PRK06197 short chain dehydrogenase; Provisional

Probab=98.93  E-value=3.7e-09  Score=86.56  Aligned_cols=64  Identities=16%  Similarity=0.215  Sum_probs=54.5

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D  159 (159)
                      .+.++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++++.  +.+ +.++++|
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~D   75 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGAD-VTLQELD   75 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCc-eEEEECC
Confidence            456788999999999999999999999999999999999988888777777654  345 6777776

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=98.92  E-value=4.1e-09  Score=83.57  Aligned_cols=63  Identities=19%  Similarity=0.275  Sum_probs=56.3

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.++++|+++|||+++|||++++++|+++|++|++++|+++.+++..+++++.+.+ +..+++|
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   68 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGA-AEALAFD   68 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEcc
Confidence            45688999999999999999999999999999999999988888888888877777 7788876

>PRK07890 short chain dehydrogenase; Provisional

Probab=98.92  E-value=4.4e-09  Score=83.26  Aligned_cols=60  Identities=20%  Similarity=0.387  Sum_probs=53.4

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.+|+++||||++|||+++|++|+++|++|++++|+++..++..+++++.+.+ +..+.+|
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   62 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRR-ALAVPTD   62 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCc-eEEEecC
Confidence            56899999999999999999999999999999999988888888888776766 7777776

>PRK06720 hypothetical protein; Provisional

Probab=98.91  E-value=4.9e-09  Score=80.16  Aligned_cols=62  Identities=24%  Similarity=0.395  Sum_probs=54.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++++|+++|||+++|||.++|++|+++|++|++++++++..++..+++++.+.+ ..++++|
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   73 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGE-ALFVSYD   73 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence            3468999999999999999999999999999999999988888888888766766 7777776

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=98.91  E-value=5.4e-09  Score=83.63  Aligned_cols=63  Identities=33%  Similarity=0.453  Sum_probs=56.2

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..++++|+++|||+++|||++++++|+++|++|++.+|+++++++..+++++.+.+ +..+++|
T Consensus         5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   67 (265)
T PRK07097          5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIE-AHGYVCD   67 (265)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEcC
Confidence            34678999999999999999999999999999999999998888888888877777 8888887

>PRK06172 short chain dehydrogenase; Provisional

Probab=98.91  E-value=5e-09  Score=82.96  Aligned_cols=62  Identities=29%  Similarity=0.443  Sum_probs=55.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++.+|+++|||+++|||.+++++|+++|++|++++|++++.++..+++++.+.+ +..+++|
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   64 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGE-ALFVACD   64 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEcC
Confidence            3467899999999999999999999999999999999998888888888777777 7788776

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.91  E-value=4.9e-09  Score=83.04  Aligned_cols=62  Identities=24%  Similarity=0.436  Sum_probs=55.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++|||+++|||.+++++|+++|++|++.+|++++.++..+++++.+.+ +..+++|
T Consensus         3 ~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   64 (262)
T PRK13394          3 SNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGK-AIGVAMD   64 (262)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCce-EEEEECC
Confidence            3567899999999999999999999999999999999998888888888777776 7778877

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=98.91  E-value=3.4e-09  Score=87.44  Aligned_cols=62  Identities=16%  Similarity=0.117  Sum_probs=53.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..+.+|+++||||++|||.+++++|+++|++|++++|+.++.++..++++..+.+ +.++++|
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   63 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDS-YTIIHID   63 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCc-eEEEEec
Confidence            4457899999999999999999999999999999999998888888887654555 7777776

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.90  E-value=5.4e-09  Score=84.45  Aligned_cols=60  Identities=17%  Similarity=0.091  Sum_probs=49.2

Q ss_pred             CCCCCeEEEeCCCC--CchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~--GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++||+++||||++  |||+++|++|+++|++|++++|+ ++.++..+++.....+ +..+++|
T Consensus         3 ~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~-~~~~~~D   64 (262)
T PRK07984          3 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGS-DIVLPCD   64 (262)
T ss_pred             ccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCC-ceEeecC
Confidence            46799999999986  99999999999999999999987 4556666777666555 6677776

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=98.90  E-value=6.4e-09  Score=82.79  Aligned_cols=62  Identities=21%  Similarity=0.400  Sum_probs=52.8

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..++++|+++||||++|||+++|++|+++|++|++.+|+ ++.++..+++++.+.+ +..+++|
T Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~D   71 (258)
T PRK06935         10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRK-VTFVQVD   71 (258)
T ss_pred             cccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCc-eEEEEcC
Confidence            345789999999999999999999999999999999998 5667777777666666 7788877

>PRK07774 short chain dehydrogenase; Provisional

Probab=98.89  E-value=6.3e-09  Score=81.99  Aligned_cols=63  Identities=19%  Similarity=0.377  Sum_probs=53.8

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |.++++|+++|||+++|||.+++++|+++|++|++.+|+++..+++.+++++.+.+ ...+.+|
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   63 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGT-AIAVQVD   63 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcC
Confidence            34578899999999999999999999999999999999987777787777766655 6667766

>PRK08278 short chain dehydrogenase; Provisional

Probab=98.89  E-value=7.2e-09  Score=83.67  Aligned_cols=62  Identities=21%  Similarity=0.288  Sum_probs=52.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc-------HHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG-------NNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~-------~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++.+|+++||||++|||+++|++|+++|++|++++|+.+.       +++..+++++.+.+ +..+++|
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~D   70 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ-ALPLVGD   70 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCc-eEEEEec
Confidence            45678999999999999999999999999999999997643       45666777776777 8888877

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.89  E-value=5.6e-09  Score=83.43  Aligned_cols=63  Identities=22%  Similarity=0.449  Sum_probs=52.2

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      +.++++|+++||||++|||+++|++|+++|++|+++++ +++.+++..++++.. +.+ +..+++|
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   67 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIK-AKAYPLN   67 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCc-eEEEEcC
Confidence            45678999999999999999999999999999998865 566677777777654 556 7888877

>PRK05872 short chain dehydrogenase; Provisional

Probab=98.89  E-value=4.4e-09  Score=86.00  Aligned_cols=63  Identities=27%  Similarity=0.390  Sum_probs=52.6

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++.+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.. +.+ +..+++|
T Consensus         3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~-~~~~~~D   65 (296)
T PRK05872          3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDR-VLTVVAD   65 (296)
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCc-EEEEEec
Confidence            34578899999999999999999999999999999999999888888777642 344 5555665

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=98.87  E-value=7.3e-09  Score=82.57  Aligned_cols=60  Identities=25%  Similarity=0.435  Sum_probs=49.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.  .++..+++++.+.+ +..+++|
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~-~~~~~~D   63 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE--APETQAQVEALGRK-FHFITAD   63 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch--HHHHHHHHHHcCCe-EEEEEeC
Confidence            357899999999999999999999999999999998864  34555666666766 7788776

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.87  E-value=7.9e-09  Score=82.99  Aligned_cols=62  Identities=18%  Similarity=0.169  Sum_probs=48.4

Q ss_pred             CCCCCCCeEEEeCC--CCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGA--GNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~--s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |..+++|+++||||  ++|||+++|++|+++|++|++.+|++ +.++..+++.+..+. ...+++|
T Consensus         1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~D   64 (261)
T PRK08690          1 MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDS-ELVFRCD   64 (261)
T ss_pred             CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCC-ceEEECC
Confidence            34578999999997  67999999999999999999988864 445555666555444 5677777

>PRK07576 short chain dehydrogenase; Provisional

Probab=98.87  E-value=7.2e-09  Score=83.17  Aligned_cols=63  Identities=13%  Similarity=0.199  Sum_probs=54.4

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |+++++|+++|||+++|||.+++++|+++|++|++++|+++..++..+++.+.+.+ +..+++|
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   66 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPE-GLGVSAD   66 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCc-eEEEECC
Confidence            45678999999999999999999999999999999999988777777777766666 6777776

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.87  E-value=9.8e-09  Score=84.50  Aligned_cols=63  Identities=22%  Similarity=0.341  Sum_probs=54.7

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC-CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~-~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..+++||+++|||+++|||+++|++|+++|++|++.+++ .+..++..+++++.|.+ +..+++|
T Consensus         7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~-~~~~~~D   70 (306)
T PRK07792          7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAK-AVAVAGD   70 (306)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCe-EEEEeCC
Confidence            456889999999999999999999999999999999885 45577888888877777 8888877

>PRK08628 short chain dehydrogenase; Provisional

Probab=98.86  E-value=9.6e-09  Score=81.55  Aligned_cols=61  Identities=15%  Similarity=0.283  Sum_probs=53.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++||+++||||++|||+++|++|+++|++|++.+|+++.. +..+++++.+.+ +.++++|
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~-~~~~~~D   63 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPR-AEFVQVD   63 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCc-eEEEEcc
Confidence            357899999999999999999999999999999999988766 667777777777 8888877

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=98.85  E-value=1.1e-08  Score=82.02  Aligned_cols=62  Identities=18%  Similarity=0.109  Sum_probs=49.6

Q ss_pred             CCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCc--cHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEK--GNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~--~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++||+++|||++  +|||+++|++|+++|++|++.+++.+  +.++..+++++.+.+ +..+++|
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   67 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNP-SLFLPCD   67 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCc-ceEeecC
Confidence            35689999999986  89999999999999999998877543  456666777666555 6677776

>PRK08703 short chain dehydrogenase; Provisional

Probab=98.85  E-value=8.9e-09  Score=80.95  Aligned_cols=63  Identities=22%  Similarity=0.340  Sum_probs=51.9

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC-CeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY-KNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~-~~v~~~~~D  159 (159)
                      |.++++|+++||||++|||++++++|+++|++|++.+|++++.++..+++.+.+. + +..+++|
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D   64 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPE-PFAIRFD   64 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCC-cceEEee
Confidence            4567889999999999999999999999999999999999888888888765542 3 4444444

>PRK12939 short chain dehydrogenase; Provisional

Probab=98.85  E-value=1.1e-08  Score=80.39  Aligned_cols=62  Identities=26%  Similarity=0.344  Sum_probs=54.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++|||+++|||.+++++|+++|++|++.+|++++.++..+++++.+.+ +..+++|
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   64 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGR-AHAIAAD   64 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence            4567899999999999999999999999999999999988888888888776766 7777776

>PRK07814 short chain dehydrogenase; Provisional

Probab=98.85  E-value=9.5e-09  Score=82.23  Aligned_cols=61  Identities=21%  Similarity=0.406  Sum_probs=53.9

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++|||+++|||+++++.|+++|++|++++|++++.++..++++..+.+ +.++++|
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   67 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRR-AHVVAAD   67 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence            467899999999999999999999999999999999988888888888766666 7777776

>PRK07904 short chain dehydrogenase; Provisional

Probab=98.85  E-value=9.6e-09  Score=82.24  Aligned_cols=59  Identities=14%  Similarity=0.303  Sum_probs=51.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCcc-HHHHHHHHHHcCC-CeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKG-NNETKQMLEEQGY-KNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~-~~~~~~ei~~~g~-~~v~~~~~D  159 (159)
                      .+|+++||||++|||+++|++++++| ++|++++|+++. +++..+++++.+. + +.++++|
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~-v~~~~~D   68 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASS-VEVIDFD   68 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCc-eEEEEec
Confidence            47899999999999999999999995 899999999886 8888888887664 5 7788877

>PRK08643 acetoin reductase; Validated

Probab=98.84  E-value=1.1e-08  Score=81.14  Aligned_cols=58  Identities=29%  Similarity=0.455  Sum_probs=52.3

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +|+++|||+++|||.+++++|+++|++|++.+|+.+..++..+++++.+.+ +..+++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   59 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGK-AIAVKAD   59 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEECC
Confidence            689999999999999999999999999999999988888888888776766 7788877

>PRK09242 tropinone reductase; Provisional

Probab=98.83  E-value=1.1e-08  Score=81.25  Aligned_cols=62  Identities=24%  Similarity=0.420  Sum_probs=53.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D  159 (159)
                      .++++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++++.  +.+ +..+++|
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~D   68 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPERE-VHGLAAD   68 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCe-EEEEECC
Confidence            4578999999999999999999999999999999999988888888887665  455 7777776

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.83  E-value=1.3e-08  Score=79.92  Aligned_cols=62  Identities=29%  Similarity=0.410  Sum_probs=53.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++++++|||+++|||..++++|+++|++|++++|+.++.++..++++..+.+ +..+++|
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   64 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVK-VVIATAD   64 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCe-EEEEECC
Confidence            3467899999999999999999999999999999999988888888888766666 7777776

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.83  E-value=1.3e-08  Score=80.25  Aligned_cols=60  Identities=27%  Similarity=0.443  Sum_probs=53.9

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++|+++|||++++||.+++++|+++|++|++++|+++..++..+++++.+.+ +..+.+|
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   61 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGK-AIGVAMD   61 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcC
Confidence            46799999999999999999999999999999999998888888888777777 7788876

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=98.83  E-value=1.4e-08  Score=80.68  Aligned_cols=60  Identities=25%  Similarity=0.349  Sum_probs=50.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|+++|++|++++|++ ..++..++++..+.+ +..+++|
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~-~~~~~~D   64 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGE-ALALTAD   64 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCe-EEEEEEe
Confidence            46789999999999999999999999999999999985 355666777666666 7777776

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=98.82  E-value=1.6e-08  Score=80.37  Aligned_cols=61  Identities=28%  Similarity=0.509  Sum_probs=54.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+.+|+++||||++|||.+++++|+++|+++++.+|+.+..++..+++++.+.+ +..+.+|
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   68 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ-AFACRCD   68 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence            467999999999999999999999999999999999988888888888777766 7777776

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.81  E-value=1.6e-08  Score=81.07  Aligned_cols=62  Identities=18%  Similarity=0.099  Sum_probs=45.8

Q ss_pred             CCCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..+++||+++|||++  +|||+++|++|+++|++|++++|+++.. +..+++.++... +..+++|
T Consensus         5 ~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~~~~~~~~-~~~~~~D   68 (258)
T PRK07533          5 LLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEPLAEELDA-PIFLPLD   68 (258)
T ss_pred             ccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHHHhhcc-ceEEecC
Confidence            456789999999998  5999999999999999999999986432 223333333223 4566666

>PRK07677 short chain dehydrogenase; Provisional

Probab=98.81  E-value=1.4e-08  Score=80.48  Aligned_cols=58  Identities=21%  Similarity=0.379  Sum_probs=51.4

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ||+++|||+++|||++++++|+++|++|++++|+.++.++..+++++.+.+ +..+++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   58 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQ-VLTVQMD   58 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEec
Confidence            589999999999999999999999999999999988888888888766666 7778776

>PLN02253 xanthoxin dehydrogenase

Probab=98.81  E-value=1.2e-08  Score=82.23  Aligned_cols=62  Identities=19%  Similarity=0.375  Sum_probs=51.0

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..++++|+++||||++|||++++++|+++|++|++.+|+++..++..+++.. +.+ +..+++|
T Consensus        13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~D   74 (280)
T PLN02253         13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-EPN-VCFFHCD   74 (280)
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-CCc-eEEEEee
Confidence            3467899999999999999999999999999999999988777777666632 345 6677776

>PRK12747 short chain dehydrogenase; Provisional

Probab=98.81  E-value=1.6e-08  Score=80.15  Aligned_cols=60  Identities=25%  Similarity=0.391  Sum_probs=49.7

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEc-CCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWD-IDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~-r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++|+++|||+++|||.++|++|+++|++|++.+ ++++..++..+++++.+.+ +..+++|
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   62 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGS-AFSIGAN   62 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCc-eEEEecc
Confidence            4689999999999999999999999999999875 5666677777777766666 6666665

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=98.81  E-value=1.3e-08  Score=81.26  Aligned_cols=59  Identities=24%  Similarity=0.451  Sum_probs=47.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..+++|+++||||++|||+++|++|+++|++|++.+|+++++++..+++   +.+ +..+++|
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   60 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDH-VLVVEGD   60 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc-ceEEEcc
Confidence            3467899999999999999999999999999999999987766655543   334 5556655

>PRK06949 short chain dehydrogenase; Provisional

Probab=98.80  E-value=1.7e-08  Score=79.87  Aligned_cols=62  Identities=26%  Similarity=0.367  Sum_probs=54.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++.+|+++|||+++|||++++++|+++|++|++++|++++++++.++++..+.+ +..+.+|
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   66 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGA-AHVVSLD   66 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEec
Confidence            4578999999999999999999999999999999999998888888888766666 7777665

>PRK08226 short chain dehydrogenase; Provisional

Probab=98.80  E-value=2e-08  Score=79.86  Aligned_cols=61  Identities=28%  Similarity=0.425  Sum_probs=50.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||++++++|+++|++|++++|+++ .++..+++.+.+.+ +..+++|
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~-~~~~~~D   62 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHR-CTAVVAD   62 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCc-eEEEECC
Confidence            4567899999999999999999999999999999999874 45555666655666 7777776

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.80  E-value=2.4e-08  Score=80.14  Aligned_cols=60  Identities=23%  Similarity=0.258  Sum_probs=46.2

Q ss_pred             CCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCc---cHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEK---GNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~---~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++||+++||||+  +|||+++|++|+++|++|++.+|+..   +++++.++++  +.+ +..+++|
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~-~~~~~~D   67 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQE-SLLLPCD   67 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCc-eEEEecC
Confidence            45779999999997  89999999999999999999987642   3344444332  455 7778877

>PRK07806 short chain dehydrogenase; Provisional

Probab=98.79  E-value=2.8e-08  Score=78.31  Aligned_cols=62  Identities=23%  Similarity=0.289  Sum_probs=51.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc-cHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK-GNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~-~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++|||+++|||++++++|+++|++|++.+|+.+ ..++..++++..+.+ +..+++|
T Consensus         2 ~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~-~~~~~~D   64 (248)
T PRK07806          2 GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGR-ASAVGAD   64 (248)
T ss_pred             CCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCc-eEEEEcC
Confidence            3467899999999999999999999999999999988753 456666677666666 7777776

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=98.79  E-value=1.3e-08  Score=84.07  Aligned_cols=59  Identities=15%  Similarity=0.133  Sum_probs=51.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+|+++|||+++|||+++|++|+++| ++|++++|++++.+++.++++..+.+ +..+++|
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   61 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDS-YTIMHLD   61 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCe-EEEEEcC
Confidence            47899999999999999999999999 99999999998888888877655555 6777776

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK09072 short chain dehydrogenase; Provisional

Probab=98.79  E-value=1.8e-08  Score=80.44  Aligned_cols=60  Identities=22%  Similarity=0.229  Sum_probs=51.1

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++++++||||++|||++++++++++|++|++++|+++..++..+++ +.+.+ +.++++|
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~-~~~~~~D   61 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGR-HRWVVAD   61 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCc-eEEEEcc
Confidence            357899999999999999999999999999999999988888777777 33455 7777776

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=98.79  E-value=2.3e-08  Score=78.39  Aligned_cols=61  Identities=30%  Similarity=0.475  Sum_probs=53.1

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++++|.+++++|+++|++|++++|+.++.++..+++++.+.+ +..+.+|
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   63 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGK-ARARQVD   63 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEECC
Confidence            457899999999999999999999999999999999988777777788777766 7777776

>PRK06128 oxidoreductase; Provisional

Probab=98.79  E-value=2.7e-08  Score=81.40  Aligned_cols=63  Identities=27%  Similarity=0.384  Sum_probs=52.3

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc--cHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK--GNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~--~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +..+++|+++||||++|||+++|++|+++|++|++.+++.+  ..++..+++++.+.+ +..+++|
T Consensus        50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D  114 (300)
T PRK06128         50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRK-AVALPGD  114 (300)
T ss_pred             ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCe-EEEEecC
Confidence            44578999999999999999999999999999998877543  456677777777777 7888877

>PRK06125 short chain dehydrogenase; Provisional

Probab=98.79  E-value=2.2e-08  Score=79.71  Aligned_cols=61  Identities=25%  Similarity=0.322  Sum_probs=52.9

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      ++++|+++|||+++|||+++|++|+++|++|++++|++++.++..+++++. +.+ +..+++|
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D   65 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVD-VAVHALD   65 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCc-eEEEEec
Confidence            467899999999999999999999999999999999988888888888765 445 6777776

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.78  E-value=2.3e-08  Score=78.56  Aligned_cols=61  Identities=23%  Similarity=0.450  Sum_probs=53.9

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++++++|||+++|||.++++.++++|++|++++|++++.++..++++..+.+ +..+++|
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   62 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTE-VRGYAAN   62 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEcC
Confidence            367899999999999999999999999999999999988888888888777776 7777776

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=98.78  E-value=2e-08  Score=79.88  Aligned_cols=61  Identities=21%  Similarity=0.281  Sum_probs=53.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++|||+++|||.++|++|+++|++|++++|+.++.++..+++++.+.+ +..+++|
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~-~~~~~~D   69 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGID-ALWIAAD   69 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEEcc
Confidence            467899999999999999999999999999999999988888888788776666 7777776

>PRK06138 short chain dehydrogenase; Provisional

Probab=98.78  E-value=2.3e-08  Score=78.78  Aligned_cols=60  Identities=28%  Similarity=0.478  Sum_probs=51.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||.+++++|+++|++|++.+|+.+..++..++++ .+.+ +..+++|
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~-~~~~~~D   61 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGR-AFARQGD   61 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCe-EEEEEcC
Confidence            4678999999999999999999999999999999999887777777665 4555 6777776

>PRK05717 oxidoreductase; Validated

Probab=98.78  E-value=2.4e-08  Score=79.36  Aligned_cols=61  Identities=23%  Similarity=0.350  Sum_probs=48.8

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +..+++||+++|||+++|||+++|++|+++|++|++++++.++.++..+++   +.+ +.++++|
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~-~~~~~~D   64 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GEN-AWFIAMD   64 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCc-eEEEEcc
Confidence            345678999999999999999999999999999999999876655544332   444 6666766

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.78  E-value=1.1e-08  Score=75.95  Aligned_cols=57  Identities=30%  Similarity=0.457  Sum_probs=49.6

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC--CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID--EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~--~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |+++||||++|||++++++|+++|+ +|++++|+  .+..+++.++++..+.+ +..+++|
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~-~~~~~~D   60 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAK-ITFIECD   60 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSE-EEEEESE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccc-ccccccc
Confidence            6899999999999999999999966 67778888  67788888888888877 8888876

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=98.77  E-value=3.2e-08  Score=77.96  Aligned_cols=59  Identities=31%  Similarity=0.469  Sum_probs=48.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++|||+++|||.++|++|+++|++|++++|++  .++..+++++.+.+ +..+++|
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~~-~~~~~~D   60 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRR-FLSLTAD   60 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCCc-eEEEECC
Confidence            46799999999999999999999999999999999875  34555666666666 7777776

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05599 hypothetical protein; Provisional

Probab=98.77  E-value=1.7e-08  Score=80.36  Aligned_cols=57  Identities=19%  Similarity=0.244  Sum_probs=49.4

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++||||++|||+++|++|+ +|++|++++|++++++++.+++++.+.+.+..+++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~D   57 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFD   57 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcc
Confidence            478999999999999999999 599999999999999999999987764216677877

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.77  E-value=2.9e-08  Score=79.70  Aligned_cols=60  Identities=22%  Similarity=0.097  Sum_probs=45.8

Q ss_pred             CCCCCeEEEeCCCC--CchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~--GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++||+++|||+++  |||+++|++|+++|++|++.+|++ +.++..+++.++.+. ...+++|
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~-~~~~~~D   66 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC-NFVSELD   66 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC-ceEEEcc
Confidence            46789999999997  999999999999999999998874 345555666544222 3345666

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.77  E-value=2.2e-08  Score=79.96  Aligned_cols=58  Identities=16%  Similarity=0.134  Sum_probs=45.8

Q ss_pred             CCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++||+++||||+  +|||+++|++|+++|++|++.+|++ +.++..+++.  +.+ +..+++|
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~-~~~~~~D   63 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEE-DLLVECD   63 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCc-eeEEeCC
Confidence            4679999999999  8999999999999999999999983 4444444442  234 6677777

>PRK12746 short chain dehydrogenase; Provisional

Probab=98.77  E-value=2.9e-08  Score=78.53  Aligned_cols=63  Identities=27%  Similarity=0.450  Sum_probs=51.5

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEE-cCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCW-DIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~-~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |.++++++++|||+++|||.++|++|+++|++|++. .|+.++.++..++++..+.+ +..+++|
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   64 (254)
T PRK12746          1 MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGK-AFLIEAD   64 (254)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc-EEEEEcC
Confidence            345678999999999999999999999999999775 67777777777777665656 7777776

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=98.76  E-value=2e-08  Score=80.23  Aligned_cols=58  Identities=26%  Similarity=0.508  Sum_probs=46.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++..+++.++   .+.+ +..+++|
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~-~~~~~~D   59 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDA-VVGVEGD   59 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCc-eEEEEec
Confidence            36789999999999999999999999999999999987666554432   2444 6666665

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.76  E-value=2.7e-08  Score=78.13  Aligned_cols=60  Identities=25%  Similarity=0.437  Sum_probs=51.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++++++|||+++|||.+++++|+++|++|++.+|++++.++..+++++ +.+ +.++++|
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~-~~~~~~D   61 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGR-AIAVAAD   61 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCe-EEEEECC
Confidence            36789999999999999999999999999999999998887777777654 555 6777776

>PRK07985 oxidoreductase; Provisional

Probab=98.76  E-value=3.7e-08  Score=80.65  Aligned_cols=63  Identities=22%  Similarity=0.329  Sum_probs=51.1

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC--ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE--KGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~--~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.++++|+++|||+++|||+++|++|+++|++|++.+++.  +..+++.+.+++.+.+ +..+++|
T Consensus        44 ~~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D  108 (294)
T PRK07985         44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRK-AVLLPGD  108 (294)
T ss_pred             CCccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCe-EEEEEcc
Confidence            3457899999999999999999999999999999988753  3456666666666666 7777776

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.76  E-value=2.7e-08  Score=78.37  Aligned_cols=60  Identities=25%  Similarity=0.465  Sum_probs=52.0

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEE-EcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVC-WDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi-~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.+|+++||||++|||++++++|+++|++|++ .+|+.++.++..+++++.+.+ +..+++|
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   62 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRK-ALAVKAN   62 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCe-EEEEEcC
Confidence            45789999999999999999999999999876 578887788888888877777 7788777

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=98.75  E-value=3e-08  Score=78.76  Aligned_cols=59  Identities=25%  Similarity=0.385  Sum_probs=48.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.+.+|+++|||+++|||.++|++|+++|++|++++|+.+..++..+++   +.+ +..+++|
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   60 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPA-AIAVSLD   60 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCc-eEEEEcc
Confidence            4577899999999999999999999999999999999987777665544   334 5666665

>PRK07454 short chain dehydrogenase; Provisional

Probab=98.75  E-value=3.5e-08  Score=77.54  Aligned_cols=59  Identities=24%  Similarity=0.274  Sum_probs=52.1

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++|+++|||+++|+|+.++++|+++|++|++++|++++.+++.+++++.+.+ +..+++|
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   63 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVK-AAAYSID   63 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCc-EEEEEcc
Confidence            4689999999999999999999999999999999988888888888776666 7788876

>PRK07024 short chain dehydrogenase; Provisional

Probab=98.75  E-value=1.7e-08  Score=80.43  Aligned_cols=57  Identities=21%  Similarity=0.345  Sum_probs=48.7

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +|+++||||++|||++++++|+++|++|++++|+.+++++..++++..+ + +..+++|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~D   58 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-R-VSVYAAD   58 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-e-eEEEEcC
Confidence            4789999999999999999999999999999999887777777665444 5 7777776

>PRK08251 short chain dehydrogenase; Provisional

Probab=98.74  E-value=2.9e-08  Score=78.24  Aligned_cols=58  Identities=26%  Similarity=0.345  Sum_probs=50.3

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D  159 (159)
                      +|+++||||++|||++++++|+++|++|++.+|++++.++..+++.+.  +.+ +..+++|
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D   61 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIK-VAVAALD   61 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCce-EEEEEcC
Confidence            689999999999999999999999999999999988888887777654  445 7777776

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=98.74  E-value=3.3e-08  Score=78.78  Aligned_cols=61  Identities=26%  Similarity=0.467  Sum_probs=51.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC-CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~-~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|+++|++|++.+|+ ++..++..+++++.+.+ +..+.+|
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~-~~~~~~D   65 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGE-AIAVKGD   65 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCe-EEEEEec
Confidence            4689999999999999999999999999999998885 44566777778776766 7777776

>PRK06500 short chain dehydrogenase; Provisional

Probab=98.74  E-value=3.2e-08  Score=77.75  Aligned_cols=58  Identities=26%  Similarity=0.383  Sum_probs=46.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++|||+++|||++++++|+++|++|++.+|+++..++..+++   +.+ +..+++|
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   60 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GES-ALVIRAD   60 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCc-eEEEEec
Confidence            467899999999999999999999999999999999876655554443   445 5666665

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.73  E-value=3.9e-08  Score=79.66  Aligned_cols=59  Identities=20%  Similarity=0.141  Sum_probs=44.3

Q ss_pred             CCCCeEEEeCCCC--CchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~--GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++|+++|||+++  |||+++|++|+++|++|++++|+++..++ .+++.+..+. ...+++|
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~-~~~~~~D   65 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGS-DFVLPCD   65 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCC-ceEEeCC
Confidence            6789999999996  99999999999999999999988644333 3344332223 3456776

>PRK07825 short chain dehydrogenase; Provisional

Probab=98.73  E-value=2.5e-08  Score=79.95  Aligned_cols=57  Identities=25%  Similarity=0.323  Sum_probs=46.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++++++||||++|||++++++|+++|++|++.+|+++++++..+++.    + +..+++|
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~-~~~~~~D   58 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----L-VVGGPLD   58 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----c-ceEEEcc
Confidence            4568999999999999999999999999999999999877776665543    3 4455554

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=98.73  E-value=2.7e-08  Score=79.34  Aligned_cols=55  Identities=22%  Similarity=0.370  Sum_probs=48.6

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++|||+++|||+++|++|+++|++|++.+|+++++++..+++++.+ + +..+++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~-~~~~~~D   56 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-E-VYAVKAD   56 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-C-ceEEEcC
Confidence            68999999999999999999999999999999988888888887654 5 6777776

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.72  E-value=4.6e-08  Score=78.04  Aligned_cols=63  Identities=16%  Similarity=0.323  Sum_probs=49.8

Q ss_pred             CCCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCC-----------CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDID-----------EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~-----------~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |.+++||+++|||++  +|||+++|++|+++|++|++.+++           .+..++..+++++.|.+ +..+++|
T Consensus         1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~D   76 (256)
T PRK12859          1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVK-VSSMELD   76 (256)
T ss_pred             CCCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCe-EEEEEcC
Confidence            346889999999999  499999999999999999987542           12234556677777777 8888887

>PRK09186 flagellin modification protein A; Provisional

Probab=98.72  E-value=4.5e-08  Score=77.34  Aligned_cols=61  Identities=31%  Similarity=0.437  Sum_probs=50.2

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      +++|+++|||+++|||+++|++|+++|++|++++|++++.++..+++... +.+.+.++++|
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D   63 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELD   63 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEec
Confidence            46899999999999999999999999999999999998888888887543 32214455666

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.72  E-value=5.5e-08  Score=75.81  Aligned_cols=61  Identities=28%  Similarity=0.432  Sum_probs=53.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++.+|+++|||+++|+|..++++|+++|++|++++|++++.++..++++..+.+ +..+.+|
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   62 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGE-ARVLVFD   62 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCc-eEEEEcc
Confidence            456789999999999999999999999999999999988888888888777777 7777776

>PRK06701 short chain dehydrogenase; Provisional

Probab=98.71  E-value=5.7e-08  Score=79.40  Aligned_cols=64  Identities=33%  Similarity=0.501  Sum_probs=52.9

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc-cHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK-GNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~-~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+.++++|+++|||+++|||.++|++|+++|++|++++|+.+ ..++..++++..+.+ +.++.+|
T Consensus        40 ~~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D  104 (290)
T PRK06701         40 GSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVK-CLLIPGD  104 (290)
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCe-EEEEEcc
Confidence            345788999999999999999999999999999999999854 455666666666666 7777776

>PRK05855 short chain dehydrogenase; Validated

Probab=98.71  E-value=3.8e-08  Score=86.02  Aligned_cols=62  Identities=34%  Similarity=0.633  Sum_probs=56.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..+.+++++||||++|||+++|++|+++|++|++++|+.++++++.+++++.|.+ +..+++|
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D  372 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAV-AHAYRVD  372 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEEcC
Confidence            4567899999999999999999999999999999999998899998888887877 8888887

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=98.71  E-value=4.9e-08  Score=76.77  Aligned_cols=60  Identities=17%  Similarity=0.455  Sum_probs=52.2

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++|.++||||++|||.+++++|+++|++|++.+|+.+..+++.+++++.+.+ +..+++|
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~d   60 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGN-AQAFACD   60 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCc-EEEEEcC
Confidence            35799999999999999999999999999999999988888887777766666 7777776

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.71  E-value=4e-08  Score=88.04  Aligned_cols=62  Identities=26%  Similarity=0.406  Sum_probs=55.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||++++++|+++|++|++++|+++.+++..++++..+.+ +..+++|
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D  428 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGT-AHAYTCD  428 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEec
Confidence            3577999999999999999999999999999999999998888888888777777 8888877

>PRK07326 short chain dehydrogenase; Provisional

Probab=98.71  E-value=5.6e-08  Score=75.98  Aligned_cols=60  Identities=23%  Similarity=0.356  Sum_probs=50.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+.+++++|||+++++|.+++++|+++|++|++++|++++.++..+++++. .+ +..+++|
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~D   62 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GN-VLGLAAD   62 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-Cc-EEEEEcc
Confidence            456899999999999999999999999999999999988887777777654 44 6677765

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=98.70  E-value=3.8e-08  Score=81.75  Aligned_cols=50  Identities=20%  Similarity=0.268  Sum_probs=44.5

Q ss_pred             CCCCCCeEEEeCC--CCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH
Q psy2040          97 KSLEGEIILLTGA--GNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        97 ~~l~gk~~lITG~--s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      .+++||+++|||+  ++|||+++|++|+++|++|++ +|+.++++++.+++++
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~   56 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRR   56 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhc
Confidence            3488999999999  899999999999999999998 7888888888877753

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=98.70  E-value=7.8e-08  Score=76.50  Aligned_cols=60  Identities=25%  Similarity=0.406  Sum_probs=48.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++||+++|||+++|||+++|++|+++|++|++.+++.  .++..+++++.+.+ +..+++|
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~-~~~~~~D   65 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTALGRR-FLSLTAD   65 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhcCCe-EEEEECC
Confidence            457899999999999999999999999999999887754  34555666655666 7777776

>PRK05650 short chain dehydrogenase; Provisional

Probab=98.70  E-value=5e-08  Score=78.25  Aligned_cols=57  Identities=28%  Similarity=0.473  Sum_probs=51.6

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |+++||||++|||++++++|+++|++|++.+|+.+++++..+++++.+.+ +..+++|
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   57 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGD-GFYQRCD   57 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEcc
Confidence            47899999999999999999999999999999998888888888877777 8888877

>PRK12743 oxidoreductase; Provisional

Probab=98.70  E-value=5.7e-08  Score=77.33  Aligned_cols=59  Identities=20%  Similarity=0.299  Sum_probs=50.1

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++|+++||||++|||++++++|+++|++|+++++ +.+..++..++++..+.+ +..+++|
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   60 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVR-AEIRQLD   60 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCc-eEEEEcc
Confidence            3689999999999999999999999999988764 556677777888777777 8888876

>PRK06198 short chain dehydrogenase; Provisional

Probab=98.70  E-value=5.6e-08  Score=77.11  Aligned_cols=62  Identities=24%  Similarity=0.407  Sum_probs=52.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..+++|+++|||+++|||..++++|+++|++ |++++|+.++.++..+++++.+.+ +..+.+|
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   64 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAK-AVFVQAD   64 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCe-EEEEEcc
Confidence            4577899999999999999999999999999 999999887777777777666666 6667766

>PRK07775 short chain dehydrogenase; Provisional

Probab=98.70  E-value=7.3e-08  Score=77.72  Aligned_cols=61  Identities=15%  Similarity=0.164  Sum_probs=52.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ...+|+++|||+++|||++++++|+++|++|++.+|+.+..++..++++..+.+ +..+++|
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   67 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGE-AVAFPLD   67 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEECC
Confidence            456789999999999999999999999999999999887777777777766766 7777776

>PRK09134 short chain dehydrogenase; Provisional

Probab=98.69  E-value=7.4e-08  Score=76.65  Aligned_cols=63  Identities=16%  Similarity=0.198  Sum_probs=51.1

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +....+|+++|||+++|||++++++|+++|++|++.++ +.+..+++.++++..+.+ +..+++|
T Consensus         4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   67 (258)
T PRK09134          4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRR-AVALQAD   67 (258)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCe-EEEEEcC
Confidence            33456899999999999999999999999999988766 455566777777766766 7778776

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.69  E-value=3.2e-08  Score=79.25  Aligned_cols=59  Identities=19%  Similarity=0.187  Sum_probs=45.2

Q ss_pred             CCCCCCeEEEeCC--CCCchHHHHHHHHHCCCEEEEEcCCC--ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGA--GNGIGRELAKQFVQHKVTLVCWDIDE--KGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~--s~GIG~~ia~~la~~Ga~Vvi~~r~~--~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++|||+  ++|||+++|++|+++|++|++.+|+.  +..+++.+++   +.+ +.++++|
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~-~~~~~~D   65 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEP-APVLELD   65 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCC-CcEEeCC
Confidence            4577899999999  89999999999999999999998864  3344444433   224 5666766

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.69  E-value=2.3e-08  Score=79.04  Aligned_cols=48  Identities=33%  Similarity=0.464  Sum_probs=43.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      ++.|.+++||||++|||+++|++|.+.|-+|++++|++++++++.++.
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~   49 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN   49 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC
Confidence            357889999999999999999999999999999999998888776654

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=98.69  E-value=6.9e-08  Score=76.00  Aligned_cols=62  Identities=18%  Similarity=0.340  Sum_probs=51.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..+++|+++|||+++|||.++|++|+++|++|++.++ +++..++..++++..+.+ +.++++|
T Consensus         2 ~~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~D   64 (247)
T PRK12935          2 VQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHD-VYAVQAD   64 (247)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCe-EEEEECC
Confidence            3467899999999999999999999999999987654 456667777777766767 7788876

>PRK07831 short chain dehydrogenase; Provisional

Probab=98.68  E-value=8.6e-08  Score=76.45  Aligned_cols=62  Identities=27%  Similarity=0.417  Sum_probs=52.0

Q ss_pred             CCCCCCeEEEeCCCC-CchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-C-CCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGN-GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-G-YKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~-GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g-~~~v~~~~~D  159 (159)
                      ..+++|+++||||++ |||+++++.|+++|++|++.+|+.++.++..+++++. + .+ +..+++|
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   77 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGR-VEAVVCD   77 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCce-EEEEEcc
Confidence            346789999999985 9999999999999999999999988888888888763 4 34 6677776

>PRK07102 short chain dehydrogenase; Provisional

Probab=98.68  E-value=5.5e-08  Score=76.64  Aligned_cols=57  Identities=21%  Similarity=0.246  Sum_probs=49.2

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC-CCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG-YKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g-~~~v~~~~~D  159 (159)
                      |+++||||++|||.+++++|+++|++|++++|++++.++..++++..+ .+ +.++++|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   59 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVA-VSTHELD   59 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCe-EEEEecC
Confidence            689999999999999999999999999999999888887777776553 45 7777776

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=98.68  E-value=7.1e-08  Score=75.90  Aligned_cols=60  Identities=13%  Similarity=0.222  Sum_probs=48.6

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEE-cCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCW-DIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~-~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++|+++|||+++|||+++|++|+++|++|++. +++.++.++..++++..+.+ +..+++|
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   61 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFD-FIASEGN   61 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCc-EEEEEcC
Confidence            357999999999999999999999999998884 45555666667777666766 7777776

>PRK06196 oxidoreductase; Provisional

Probab=98.67  E-value=4.8e-08  Score=80.47  Aligned_cols=48  Identities=19%  Similarity=0.272  Sum_probs=43.1

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      ++.+|+++||||++|||+++|++|+++|++|++++|++++.++..+++
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l   70 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI   70 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            467899999999999999999999999999999999988777766665

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.67  E-value=7.3e-08  Score=78.30  Aligned_cols=59  Identities=17%  Similarity=0.272  Sum_probs=43.7

Q ss_pred             CCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      .+++|+++||||+  +|||+++|++|+++|++|++++|+++ .++..+++.++ +.+  ..+++|
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~--~~~~~D   63 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD--YVYELD   63 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc--eEEEec
Confidence            3578999999997  89999999999999999999999853 33334444333 322  356665

>PRK06914 short chain dehydrogenase; Provisional

Probab=98.67  E-value=7.6e-08  Score=77.34  Aligned_cols=59  Identities=12%  Similarity=0.160  Sum_probs=50.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D  159 (159)
                      ++|+++||||++|+|.+++++|+++|++|++++|+.+..++..+++...+  .+ +.++.+|
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D   62 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQN-IKVQQLD   62 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCc-eeEEecC
Confidence            57899999999999999999999999999999999888887777766543  35 6777776

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.66  E-value=9.6e-08  Score=74.72  Aligned_cols=61  Identities=30%  Similarity=0.481  Sum_probs=52.1

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEE-cCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCW-DIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~-~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||.+++++|+++|++|++. +|+++..++..++++..+.+ +..+.+|
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   63 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGD-AIAVKAD   63 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCe-EEEEECC
Confidence            4678999999999999999999999999999998 99888777777777766666 7777776

>KOG1200|consensus

Probab=98.66  E-value=3.1e-08  Score=77.91  Aligned_cols=60  Identities=22%  Similarity=0.369  Sum_probs=51.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++.|.+++|||++|||++++..|+++|++|+++|++...+++++..+...| + ...++||
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~-~-h~aF~~D   70 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG-D-HSAFSCD   70 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC-c-cceeeec
Confidence            4567899999999999999999999999999999999988888888775443 3 5677776

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.66  E-value=8.4e-08  Score=77.74  Aligned_cols=60  Identities=13%  Similarity=0.034  Sum_probs=43.9

Q ss_pred             CCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++|+++|||++  +|||+++|++|+++|++|++++|++. .++..+++.++-+. ...+++|
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~-~~~~~~D   68 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGA-FVAGHCD   68 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCC-ceEEecC
Confidence            4578999999997  89999999999999999999988642 33333444333223 4456666

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=98.66  E-value=8.6e-08  Score=75.71  Aligned_cols=64  Identities=30%  Similarity=0.403  Sum_probs=51.7

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ...+++|+++|||+++|||.+++++|+++|++|++++|+.+..++..+++++.+...+..+.+|
T Consensus         7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d   70 (247)
T PRK08945          7 PDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLD   70 (247)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEec
Confidence            3457899999999999999999999999999999999998888888777776543214455443

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=98.65  E-value=7e-08  Score=76.92  Aligned_cols=56  Identities=21%  Similarity=0.382  Sum_probs=49.0

Q ss_pred             eEEEeCCCCCchHHHHHHHHH----CCCEEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQ----HKVTLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS  159 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~----~Ga~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D  159 (159)
                      +++|||+++|||+++|++|++    +|++|++.+|++++++++.+++++.  +.+ +..+++|
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~-v~~~~~D   63 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLR-VVRVSLD   63 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCce-EEEEEec
Confidence            689999999999999999997    7999999999999999998888763  445 7777776

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06940 short chain dehydrogenase; Provisional

Probab=98.65  E-value=7.3e-08  Score=78.02  Aligned_cols=56  Identities=23%  Similarity=0.446  Sum_probs=49.0

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +|+++|||+ +|||+++|++|+ +|++|++++|+++++++..+++++.+.+ +..+++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   57 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFD-VSTQEVD   57 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEEee
Confidence            689999998 699999999996 8999999999988888888888776777 7788877

>PRK12937 short chain dehydrogenase; Provisional

Probab=98.64  E-value=1.1e-07  Score=74.50  Aligned_cols=61  Identities=18%  Similarity=0.324  Sum_probs=50.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|+.|+++|+++++++++. +..++..+++++.+.+ +..+++|
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   63 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGR-AIAVQAD   63 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCe-EEEEECC
Confidence            46789999999999999999999999999998877654 4466677777776776 7888776

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=98.64  E-value=9.6e-08  Score=75.81  Aligned_cols=58  Identities=12%  Similarity=0.217  Sum_probs=49.7

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D  159 (159)
                      +|+++|||+++|||.+++++|+++|++|++++|+.+..++..+++++..  .+ +..+.+|
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D   61 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGM-AYGFGAD   61 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCce-eEEEEcc
Confidence            6899999999999999999999999999999999888888877776543  35 6777776

>PRK07856 short chain dehydrogenase; Provisional

Probab=98.62  E-value=9.2e-08  Score=75.85  Aligned_cols=40  Identities=30%  Similarity=0.533  Sum_probs=36.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~   41 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAP   41 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChh
Confidence            3578999999999999999999999999999999998764

>PRK12828 short chain dehydrogenase; Provisional

Probab=98.61  E-value=1.4e-07  Score=73.34  Aligned_cols=53  Identities=19%  Similarity=0.268  Sum_probs=44.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG  149 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g  149 (159)
                      .++++|+++|||++++||..++++|+++|++|++++|++++.++..+++...+
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~   55 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADA   55 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcC
Confidence            35678999999999999999999999999999999998877666666554433

>PRK12744 short chain dehydrogenase; Provisional

Probab=98.61  E-value=1.6e-07  Score=74.65  Aligned_cols=61  Identities=20%  Similarity=0.420  Sum_probs=47.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC----CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID----EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~----~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++|||+++|||.++|++|+++|++|++.+++    .+..++..+++++.+.+ +..+++|
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~D   69 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAK-AVAFQAD   69 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCc-EEEEecC
Confidence            4678999999999999999999999999997766543    23455566666666666 7777776

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.60  E-value=1.7e-07  Score=73.31  Aligned_cols=60  Identities=20%  Similarity=0.308  Sum_probs=49.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++|||+++|||..+++.++++|++|++.+|++++.++..+++...+ + +..+++|
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~D   61 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYG-N-IHYVVGD   61 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-C-eEEEECC
Confidence            3578999999999999999999999999999999999877777666665433 4 6666766

>PRK12827 short chain dehydrogenase; Provisional

Probab=98.60  E-value=1.7e-07  Score=73.36  Aligned_cols=62  Identities=23%  Similarity=0.376  Sum_probs=48.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC----CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID----EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~----~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++++++|||+++|||+++|++|+++|++|++.++.    ++..++..++++..+.+ +..+.+|
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   67 (249)
T PRK12827          2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGK-ALGLAFD   67 (249)
T ss_pred             CCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence            34668899999999999999999999999999987653    34445555566555666 7777776

>PRK09291 short chain dehydrogenase; Provisional

Probab=98.60  E-value=1.2e-07  Score=74.91  Aligned_cols=58  Identities=22%  Similarity=0.325  Sum_probs=48.9

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +|+++||||++|||++++++|+++|++|++.+|+++..++..+..+..+.+ +..+++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   59 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLA-LRVEKLD   59 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-ceEEEee
Confidence            578999999999999999999999999999999887777777666666655 6666665

>PRK06181 short chain dehydrogenase; Provisional

Probab=98.60  E-value=1.4e-07  Score=75.03  Aligned_cols=58  Identities=28%  Similarity=0.405  Sum_probs=50.6

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++++||||++|||+++++.|+++|++|++++|++++.++..++++..+.+ +..+.+|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   58 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGE-ALVVPTD   58 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence            468999999999999999999999999999999988888887778776666 7777776

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=98.59  E-value=1.6e-07  Score=73.96  Aligned_cols=58  Identities=24%  Similarity=0.390  Sum_probs=50.4

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +|.++|||+++++|++++++|+++|++|++++|+.+..++..++++..+.+ +..+++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   58 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGS-VIYLVAD   58 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEECC
Confidence            478999999999999999999999999999999988888887777666666 7777776

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR02415 23BDH acetoin reductases

Probab=98.59  E-value=1.6e-07  Score=74.14  Aligned_cols=57  Identities=26%  Similarity=0.505  Sum_probs=50.2

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |+++|||+++|||.+++++|+++|++|++++|+++..++..+++++.+.+ +..+.+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   57 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGK-AVAYKLD   57 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEEcC
Confidence            68999999999999999999999999999999988888888888776766 7777776

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.59  E-value=2.2e-07  Score=73.79  Aligned_cols=61  Identities=21%  Similarity=0.317  Sum_probs=47.8

Q ss_pred             CCCCCeEEEeCCCC--CchHHHHHHHHHCCCEEEEEcCC-----------CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDID-----------EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~--GIG~~ia~~la~~Ga~Vvi~~r~-----------~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++|||+++  |||.++|++|+++|++|++.+|+           .+...+..+++++.+.+ +..+++|
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   75 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVR-CEHMEID   75 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCe-EEEEECC
Confidence            45789999999994  99999999999999999999987           22223355566656666 7777776

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.58  E-value=1.8e-07  Score=75.18  Aligned_cols=38  Identities=26%  Similarity=0.299  Sum_probs=33.7

Q ss_pred             CCCCCCeEEEeCC--CCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040          97 KSLEGEIILLTGA--GNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        97 ~~l~gk~~lITG~--s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      ..+++|+++||||  ++|||+++|++|+++|++|++.++.
T Consensus         2 ~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~   41 (260)
T PRK06997          2 GFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVG   41 (260)
T ss_pred             CccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccc
Confidence            3467899999996  6899999999999999999998765

>PRK05875 short chain dehydrogenase; Provisional

Probab=98.58  E-value=1.8e-07  Score=75.02  Aligned_cols=61  Identities=18%  Similarity=0.257  Sum_probs=50.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D  159 (159)
                      ++++|.++|||+++|||.+++++|+++|++|++++|++++.++..+++.+.+  .+ +..+++|
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~D   66 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGA-VRYEPAD   66 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCc-eEEEEcC
Confidence            3678999999999999999999999999999999999877777777766542  34 6666666

>PRK09135 pteridine reductase; Provisional

Probab=98.58  E-value=2.4e-07  Score=72.59  Aligned_cols=61  Identities=11%  Similarity=0.126  Sum_probs=47.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC-CccHHHHHHHHHHcC-CCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQG-YKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~-~~~~~~~~~ei~~~g-~~~v~~~~~D  159 (159)
                      ..++++++|||+++|||+.++++|+++|++|++++|+ ++..++..++++..+ .. +..+++|
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D   65 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGS-AAALQAD   65 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCc-eEEEEcC
Confidence            3567899999999999999999999999999999986 444566666665443 34 6666665

>PRK08267 short chain dehydrogenase; Provisional

Probab=98.58  E-value=1.2e-07  Score=75.37  Aligned_cols=55  Identities=29%  Similarity=0.339  Sum_probs=46.9

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |+++||||++|||++++++|+++|++|++.+|+.+.+++..+++.  +.+ +.++++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~-~~~~~~D   56 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGN-AWTGALD   56 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCc-eEEEEec
Confidence            689999999999999999999999999999999887777766554  445 6777776

>PRK07832 short chain dehydrogenase; Provisional

Probab=98.57  E-value=1.4e-07  Score=75.80  Aligned_cols=58  Identities=24%  Similarity=0.230  Sum_probs=47.8

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |+++||||++|||+++|++|+++|++|++++|+++..++..++++..+.+....+++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D   58 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALD   58 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEee
Confidence            4799999999999999999999999999999998888888888876655413345555

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=98.57  E-value=2.4e-07  Score=84.42  Aligned_cols=106  Identities=24%  Similarity=0.316  Sum_probs=70.6

Q ss_pred             ccccccchHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhhhCCCCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCC
Q psy2040          51 FTDFSTSWSQSMTALSIILSELILL----IIKLLYSALESILLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKV  126 (159)
Q Consensus        51 ~~~~~~~~~~~m~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga  126 (159)
                      ..|++.++.+.|... .-+..+..+    .+.+-||-+.. .+....++..++.+|+++||||++|||+++|++|+++|+
T Consensus       362 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~f~~eyw~~e~-~kl~~~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga  439 (676)
T TIGR02632       362 AREFYVNAINVMRGA-EAVSEYVSLPEQEAFDIEYWPLEE-AKLRRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGA  439 (676)
T ss_pred             hHHHHHHHHHHHhhh-hcccceecCchhhccchhhhhhhH-HhhccCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC
Confidence            346666666655542 222222222    33334554443 333222334568899999999999999999999999999


Q ss_pred             EEEEEcCCCccHHHHHHHHHHc-C-CCeEEEEecC
Q psy2040         127 TLVCWDIDEKGNNETKQMLEEQ-G-YKNIHTYKRS  159 (159)
Q Consensus       127 ~Vvi~~r~~~~~~~~~~ei~~~-g-~~~v~~~~~D  159 (159)
                      +|++.+|+.+.+++..+++++. + .+ +..+++|
T Consensus       440 ~Vvi~~r~~~~~~~~~~~l~~~~~~~~-~~~v~~D  473 (676)
T TIGR02632       440 HVVLADLNLEAAEAVAAEINGQFGAGR-AVALKMD  473 (676)
T ss_pred             EEEEEeCCHHHHHHHHHHHHhhcCCCc-EEEEECC
Confidence            9999999988888777777643 2 24 6667776

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=98.56  E-value=2.4e-07  Score=72.47  Aligned_cols=60  Identities=22%  Similarity=0.305  Sum_probs=47.0

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |.++++|+++|||+++|||++++++|+++|+.|++.+++.+++++..+++   +.+ +..+.+|
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~-~~~~~~D   60 (245)
T PRK12936          1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GER-VKIFPAN   60 (245)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCc-eEEEEcc
Confidence            34577899999999999999999999999999998888877666654433   334 5555554

>PRK06484 short chain dehydrogenase; Validated

Probab=98.56  E-value=1.6e-07  Score=82.16  Aligned_cols=57  Identities=26%  Similarity=0.419  Sum_probs=47.7

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++|+++|||+++|||+++|++|+++|++|++++|+.+++++..+++   +.+ +..+++|
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   59 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPD-HHALAMD   59 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc-eeEEEec
Confidence            46899999999999999999999999999999999987777665554   445 6666665

>PRK06123 short chain dehydrogenase; Provisional

Probab=98.56  E-value=2.3e-07  Score=73.00  Aligned_cols=58  Identities=17%  Similarity=0.253  Sum_probs=47.3

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +|+++|||+++|||.+++++|+++|++|++.++ +++..++..+++++.+.+ +..+++|
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~D   60 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGE-ALAVAAD   60 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCc-EEEEEec
Confidence            578999999999999999999999999988874 455566666777666666 7777776

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=98.55  E-value=2.6e-07  Score=72.75  Aligned_cols=58  Identities=22%  Similarity=0.256  Sum_probs=48.8

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEc-CCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWD-IDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~-r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .|+++||||++|||.++++.|+++|++|++.+ |+++..++..++++..+.+ +..+++|
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   60 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGR-ACVVAGD   60 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc-EEEEEec
Confidence            47899999999999999999999999998764 6667777777778776666 7888876

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.55  E-value=3.2e-07  Score=72.21  Aligned_cols=62  Identities=27%  Similarity=0.387  Sum_probs=48.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++.+++++||||++|||++++++|+++|++|++..+ +.+..++..+++++.+.+ +..+.+|
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   64 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGE-GIGVLAD   64 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCe-eEEEEec
Confidence            4567899999999999999999999999999887665 444455555666666666 6666665

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.55  E-value=2.8e-07  Score=72.83  Aligned_cols=58  Identities=22%  Similarity=0.321  Sum_probs=47.5

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .|+++|||+++|||.+++++|+++|++|++++|+. +..++..++++..+.+ +.++++|
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   60 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVE-VIFFPAD   60 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCc-eEEEEec
Confidence            47899999999999999999999999999999864 4455666666666666 7777776

>PRK06101 short chain dehydrogenase; Provisional

Probab=98.54  E-value=1.4e-07  Score=74.45  Aligned_cols=53  Identities=25%  Similarity=0.386  Sum_probs=42.8

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++||||++|||++++++|+++|++|++++|+++++++..+    .+.+ +..+++|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~-~~~~~~D   54 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QSAN-IFTLAFD   54 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hcCC-CeEEEee
Confidence            689999999999999999999999999999998766554433    2334 5666666

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.53  E-value=4.1e-07  Score=70.91  Aligned_cols=61  Identities=28%  Similarity=0.412  Sum_probs=48.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc-cHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK-GNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~-~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++|||+++|+|.++++.|+++|++|++..++.+ ..++..++++..+.+ +..+.+|
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   63 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGK-ALAVQGD   63 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCc-eEEEEcC
Confidence            356789999999999999999999999999988777654 456666667666666 6666665

>PRK06484 short chain dehydrogenase; Validated

Probab=98.53  E-value=1.9e-07  Score=81.58  Aligned_cols=57  Identities=25%  Similarity=0.409  Sum_probs=47.9

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..||+++||||++|||+++|++|+++|++|++.+|++++++++.+++   +.+ +..+++|
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D  323 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDE-HLSVQAD  323 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc-eeEEEcc
Confidence            46899999999999999999999999999999999987777766554   445 5666665

>PRK12829 short chain dehydrogenase; Provisional

Probab=98.53  E-value=2.7e-07  Score=73.08  Aligned_cols=60  Identities=28%  Similarity=0.443  Sum_probs=47.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++|||+++|||+.++++|+++|++|++++|+++..++..++..+.  + +..+.+|
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~-~~~~~~D   66 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--K-VTATVAD   66 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--c-eEEEEcc
Confidence            3567899999999999999999999999999999999877666655544322  3 4555554

>PRK07074 short chain dehydrogenase; Provisional

Probab=98.53  E-value=2.7e-07  Score=73.12  Aligned_cols=56  Identities=25%  Similarity=0.358  Sum_probs=47.0

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +|+++|||+++|||++++++|+++|++|++++|+.++.++..+++.  +.+ +..+++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~-~~~~~~D   57 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DAR-FVPVACD   57 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCc-eEEEEec
Confidence            5789999999999999999999999999999999887777776662  334 6666665

>PRK06057 short chain dehydrogenase; Provisional

Probab=98.52  E-value=2.3e-07  Score=73.73  Aligned_cols=48  Identities=29%  Similarity=0.534  Sum_probs=41.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      .++||+++|||+++|||.+++++|+++|++|++++|+++..++..+++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~   51 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV   51 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc
Confidence            467899999999999999999999999999999999876665554443

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=98.51  E-value=3.7e-07  Score=71.29  Aligned_cols=57  Identities=18%  Similarity=0.253  Sum_probs=46.1

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |+++|||+++|||++++++|+++|++|++.+| +++..++..+++...+.+ +..+++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   58 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFD-FRVVEGD   58 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCc-eEEEEec
Confidence            68999999999999999999999999998887 555566666666555556 7777766

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=98.50  E-value=3.8e-07  Score=73.08  Aligned_cols=57  Identities=18%  Similarity=0.161  Sum_probs=46.4

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      ++++||||++|||++++++|+++|++|++.++ ++++++++.++++.. +.+ +..+.+|
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~D   60 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNS-AVTCQAD   60 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCc-eEEEEcc
Confidence            68999999999999999999999999998765 566777777777654 445 6667776

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12742 oxidoreductase; Provisional

Probab=98.50  E-value=3.8e-07  Score=71.27  Aligned_cols=45  Identities=18%  Similarity=0.381  Sum_probs=37.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNET  141 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~  141 (159)
                      .++++|+++||||++|||+++|++|+++|++|++.++ +++..+++
T Consensus         2 ~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l   47 (237)
T PRK12742          2 GAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERL   47 (237)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence            4567899999999999999999999999999988766 34434433

>PRK06841 short chain dehydrogenase; Provisional

Probab=98.49  E-value=5.3e-07  Score=71.28  Aligned_cols=59  Identities=24%  Similarity=0.340  Sum_probs=44.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++.+|+++|||+++|||.++|++|+++|++|++++|+++. .+..+++.  +.+ +..+++|
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~--~~~-~~~~~~D   69 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL--GGN-AKGLVCD   69 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh--CCc-eEEEEec
Confidence            46789999999999999999999999999999999998653 33333332  233 4455555

>PRK08264 short chain dehydrogenase; Validated

Probab=98.48  E-value=3.3e-07  Score=71.74  Aligned_cols=43  Identities=26%  Similarity=0.507  Sum_probs=38.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNN  139 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~  139 (159)
                      +++.+++++||||++|+|+++|++|+++|+ +|++++|+.++.+
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~   45 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVT   45 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhh
Confidence            456789999999999999999999999999 9999999876544

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.48  E-value=5.3e-07  Score=70.97  Aligned_cols=58  Identities=19%  Similarity=0.361  Sum_probs=43.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++|+++||||++|||+++|+.|+++|++|++.++ ++++.++..+++   +.+ +.++++|
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~-~~~~~~D   60 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDR-AIALQAD   60 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCc-eEEEEcC
Confidence            356899999999999999999999999999988765 444444443332   334 6666666

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=98.47  E-value=4.9e-07  Score=70.79  Aligned_cols=57  Identities=25%  Similarity=0.387  Sum_probs=47.9

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEE-EcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVC-WDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi-~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |+++||||++|||.+++++|+++|++|++ ..|++++.++..+++++.+.+ +..+++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   59 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGK-AFVLQAD   59 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCe-EEEEEcc
Confidence            58999999999999999999999999987 467777777777777776666 7777776

>PLN00015 protochlorophyllide reductase

Probab=98.47  E-value=2.1e-07  Score=76.58  Aligned_cols=54  Identities=17%  Similarity=0.123  Sum_probs=46.2

Q ss_pred             EEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         105 LLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       105 lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +|||+++|||+++|++|+++| ++|++.+|++++.++..++++..+.+ +..+++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   55 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDS-YTVMHLD   55 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCe-EEEEEec
Confidence            589999999999999999999 99999999988888887777654555 7777776

>PRK06523 short chain dehydrogenase; Provisional

Probab=98.46  E-value=5.2e-07  Score=71.64  Aligned_cols=39  Identities=23%  Similarity=0.354  Sum_probs=36.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      .+++||+++|||+++|||++++++|+++|++|++.+|++
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~   43 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSR   43 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCCh
Confidence            457899999999999999999999999999999999864

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.45  E-value=8.5e-07  Score=69.94  Aligned_cols=61  Identities=23%  Similarity=0.401  Sum_probs=45.1

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc--HHHHHHHHHHcC-CCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG--NNETKQMLEEQG-YKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~--~~~~~~ei~~~g-~~~v~~~~~D  159 (159)
                      .+.+|+++|||+++|||+++|++|+++|++|++..++.+.  .++..+..+..+ .. +...++|
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   65 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGR-AAAVAAD   65 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCc-EEEEEec
Confidence            4578999999999999999999999999998888877654  444444444122 23 5555555

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.45  E-value=8.1e-07  Score=69.18  Aligned_cols=62  Identities=26%  Similarity=0.417  Sum_probs=47.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC-CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~-~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..++.|.++|||++++||.+++++|+++|++|++..++ .+..++..++++..+.+ +..+.+|
T Consensus         2 ~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   64 (249)
T PRK12825          2 GSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRR-AQAVQAD   64 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCc-eEEEECC
Confidence            34567899999999999999999999999998876654 44455566666666666 7777766

>PRK06182 short chain dehydrogenase; Validated

Probab=98.44  E-value=3.8e-07  Score=73.24  Aligned_cols=42  Identities=21%  Similarity=0.327  Sum_probs=37.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      ++|+++|||+++|||++++++|+++|++|++.+|+++++++.
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~   43 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL   43 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999987665443

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=98.44  E-value=5.2e-07  Score=70.68  Aligned_cols=55  Identities=20%  Similarity=0.343  Sum_probs=46.8

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEEEcCC-CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~-~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++|||+++|||+++|++|+++|++|++++++ +++.++..+++++.+.+ +.++++|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~D   56 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGN-ARLLQFD   56 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCe-EEEEEcc
Confidence            5899999999999999999999999988765 45677777888777777 8888887

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>KOG4169|consensus

Probab=98.43  E-value=4.7e-07  Score=72.58  Aligned_cols=60  Identities=22%  Similarity=0.334  Sum_probs=49.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D  159 (159)
                      ++.||++++||+.+|||++++++|.++|..+.+.+.+.|+.++. .++++..  .+ +.+++||
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~-akL~ai~p~~~-v~F~~~D   63 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAI-AKLQAINPSVS-VIFIKCD   63 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHH-HHHhccCCCce-EEEEEec
Confidence            57899999999999999999999999999988888777775544 4565554  34 7888887

>PRK05993 short chain dehydrogenase; Provisional

Probab=98.43  E-value=4e-07  Score=73.50  Aligned_cols=42  Identities=21%  Similarity=0.213  Sum_probs=37.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .+|+++||||++|||+++|++|+++|++|++++|+++.++++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l   44 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL   44 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            468999999999999999999999999999999987665443

>PRK08263 short chain dehydrogenase; Provisional

Probab=98.43  E-value=5.7e-07  Score=72.39  Aligned_cols=56  Identities=16%  Similarity=0.241  Sum_probs=44.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+|+++|||+++|||+.++++|+++|++|++.+|+.+.+++..++.   +.+ +..+++|
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   57 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDR-LLPLALD   57 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCC-eeEEEcc
Confidence            4689999999999999999999999999999999877665544332   334 5555555

>PRK06180 short chain dehydrogenase; Provisional

Probab=98.43  E-value=6e-07  Score=72.40  Aligned_cols=56  Identities=18%  Similarity=0.176  Sum_probs=43.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+|+++||||++|||++++++|+++|++|++++|++++.+++.+.   .+.+ +..+++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~-~~~~~~D   58 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDR-ALARLLD   58 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCC-eeEEEcc
Confidence            468999999999999999999999999999999987665544332   2334 5555554

>PRK06924 short chain dehydrogenase; Provisional

Probab=98.42  E-value=7.3e-07  Score=70.34  Aligned_cols=54  Identities=17%  Similarity=0.327  Sum_probs=42.0

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |+++||||++|||++++++|+++|++|++.+|++ +.+++..   ++.+.+ +..+++|
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~---~~~~~~-~~~~~~D   56 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA---EQYNSN-LTFHSLD   56 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH---hccCCc-eEEEEec
Confidence            6899999999999999999999999999999976 3333222   223455 6777776

>PRK06483 dihydromonapterin reductase; Provisional

Probab=98.42  E-value=7.6e-07  Score=69.81  Aligned_cols=37  Identities=27%  Similarity=0.293  Sum_probs=34.4

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      +|+++|||+++|||+++|++|+++|++|++.+|+++.
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   38 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP   38 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh
Confidence            5799999999999999999999999999999998754

>PRK06398 aldose dehydrogenase; Validated

Probab=98.40  E-value=4.5e-07  Score=72.48  Aligned_cols=39  Identities=23%  Similarity=0.572  Sum_probs=35.8

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      .+++||+++|||+++|||+++|++|+++|++|++.+|++
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~   40 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKE   40 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            467899999999999999999999999999999988764

>KOG1199|consensus

Probab=98.38  E-value=9.8e-07  Score=68.53  Aligned_cols=58  Identities=21%  Similarity=0.392  Sum_probs=50.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.+|-+++||||.+|+|++.|++|+++|+.|++.|....+.++.++|+   |.+ +++..+|
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~-~vf~pad   63 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGK-VVFTPAD   63 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCc-eEEeccc
Confidence            346789999999999999999999999999999999988888888776   666 7777665

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.37  E-value=1.4e-06  Score=69.16  Aligned_cols=38  Identities=26%  Similarity=0.551  Sum_probs=34.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      ++.+|+++||||++|||+++|++|+++|++|++.+++.
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~   41 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA   41 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence            46789999999999999999999999999998876654

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=98.37  E-value=9.7e-07  Score=69.89  Aligned_cols=54  Identities=24%  Similarity=0.376  Sum_probs=43.3

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|||+++|||.+++++|+++|++|++.+|+++++++..+++   +.+ +..+++|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   54 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDN-LYIAQLD   54 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccc-eEEEEec
Confidence            36899999999999999999999999999999887666655443   334 5566665

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=98.37  E-value=9.5e-07  Score=70.44  Aligned_cols=39  Identities=33%  Similarity=0.616  Sum_probs=35.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ++++|+++|||+++|||++++++|+++|++|++.+++++
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~   44 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGG   44 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            577999999999999999999999999999999887654

>PRK08324 short chain dehydrogenase; Validated

Probab=98.36  E-value=1.1e-06  Score=80.17  Aligned_cols=62  Identities=27%  Similarity=0.395  Sum_probs=51.6

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ...+.||+++||||++|||++++++|+++|++|++++|+.+..++..+++... .+ +..+++|
T Consensus       417 ~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~-v~~v~~D  478 (681)
T PRK08324        417 PKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DR-ALGVACD  478 (681)
T ss_pred             CcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-Cc-EEEEEec
Confidence            34578999999999999999999999999999999999988877777766544 34 6666665

>PRK07060 short chain dehydrogenase; Provisional

Probab=98.36  E-value=1.2e-06  Score=68.55  Aligned_cols=47  Identities=26%  Similarity=0.362  Sum_probs=40.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .++++|.++|||+++|||..+++.|+++|++|++++|+.++.++..+
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~   51 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAG   51 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            45788999999999999999999999999999999998766554443

>PRK07041 short chain dehydrogenase; Provisional

Probab=98.34  E-value=8.6e-07  Score=69.02  Aligned_cols=53  Identities=21%  Similarity=0.287  Sum_probs=44.7

Q ss_pred             EEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       105 lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +|||+++|||++++++|+++|++|++++|++++.++..++++ .+.+ +..+.+|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~-~~~~~~D   53 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG-GGAP-VRTAALD   53 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-cCCc-eEEEEcc
Confidence            589999999999999999999999999999877777777665 3555 6777776

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=98.33  E-value=1.6e-06  Score=77.73  Aligned_cols=53  Identities=8%  Similarity=0.169  Sum_probs=45.8

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      .....+||+++||||+||||+.++++|+++|++|++++|+.++++++.+++++
T Consensus        74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~  126 (576)
T PLN03209         74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQ  126 (576)
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhh
Confidence            33445789999999999999999999999999999999999888877776643

>PRK12367 short chain dehydrogenase; Provisional

Probab=98.31  E-value=9.9e-07  Score=70.75  Aligned_cols=39  Identities=23%  Similarity=0.421  Sum_probs=36.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~   48 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSK   48 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCc
Confidence            356789999999999999999999999999999999876

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=98.30  E-value=2e-06  Score=67.22  Aligned_cols=57  Identities=16%  Similarity=0.222  Sum_probs=42.7

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc-cHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK-GNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~-~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |+++|||+++|||.++|++|+++|++|++.+|+.+ ..++..++....+.+ +..+++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   60 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQ-VRLKELD   60 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCe-EEEEEcC
Confidence            68999999999999999999999999999999853 223333333333445 6677766

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=98.30  E-value=2e-06  Score=67.72  Aligned_cols=39  Identities=28%  Similarity=0.498  Sum_probs=35.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      .++++|+++|||+++|||.+++++|+++|++|++.+|+.
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~   42 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF   42 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence            347789999999999999999999999999999998865

>PRK06482 short chain dehydrogenase; Provisional

Probab=98.29  E-value=1.8e-06  Score=69.25  Aligned_cols=55  Identities=15%  Similarity=0.274  Sum_probs=42.8

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .|+++||||++|||++++++|+++|++|++.+|+++..++..++.   +.+ +.++++|
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   56 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDR-LWVLQLD   56 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCc-eEEEEcc
Confidence            478999999999999999999999999999999876655543332   234 5556655

>KOG1210|consensus

Probab=98.27  E-value=5.5e-06  Score=69.08  Aligned_cols=58  Identities=22%  Similarity=0.206  Sum_probs=49.1

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC-CCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG-YKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g-~~~v~~~~~D  159 (159)
                      ++++|||||+|+|+++|.++..+|++|.+..|+.+++++++++++-.. ..++.+..+|
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d   92 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVD   92 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccc
Confidence            799999999999999999999999999999999999999999887543 2114455554

>PRK07069 short chain dehydrogenase; Validated

Probab=98.27  E-value=2.7e-06  Score=66.84  Aligned_cols=56  Identities=18%  Similarity=0.306  Sum_probs=44.1

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEEEcCC-CccHHHHHHHHHHcCC-CeEEEEecC
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGY-KNIHTYKRS  159 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~-~~~~~~~~~ei~~~g~-~~v~~~~~D  159 (159)
                      ++||||++|||+++++.|+++|++|++++|+ .+.+++..+++++... ..+..+++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D   59 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQD   59 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEee
Confidence            7999999999999999999999999999998 6667777777765432 213445554

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.27  E-value=1.5e-06  Score=72.05  Aligned_cols=38  Identities=26%  Similarity=0.444  Sum_probs=34.6

Q ss_pred             CCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCC
Q psy2040          97 KSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        97 ~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      .+++||+++|||++  +|||+++|++|+++|++|++.++.
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~   43 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV   43 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence            46789999999996  999999999999999999998754

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.27  E-value=2.2e-06  Score=66.89  Aligned_cols=39  Identities=28%  Similarity=0.472  Sum_probs=35.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ++++|+++|||+++|||++++++|+++|++|++++|+..
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~   40 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK   40 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            467899999999999999999999999999999988653

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=98.25  E-value=3e-06  Score=73.24  Aligned_cols=41  Identities=24%  Similarity=0.421  Sum_probs=37.0

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      ++||+++||||++|||++++++|+++|++|++++|++++.+
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~  216 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKIT  216 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            56899999999999999999999999999999999876543

>PRK06179 short chain dehydrogenase; Provisional

Probab=98.24  E-value=1.4e-06  Score=69.59  Aligned_cols=37  Identities=24%  Similarity=0.409  Sum_probs=34.1

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ++++++||||++|||++++++|+++|++|++.+|+++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~   39 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPA   39 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence            4689999999999999999999999999999999754

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=98.23  E-value=3.5e-06  Score=65.49  Aligned_cols=55  Identities=25%  Similarity=0.344  Sum_probs=45.5

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++|||++++||..++++|+++|++|++.+|+. +..++..+++++.+.+ +..+++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   56 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVK-ALGVVCD   56 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCc-eEEEEec
Confidence            58999999999999999999999999998875 4556666777766766 7777776

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08177 short chain dehydrogenase; Provisional

Probab=98.21  E-value=3.5e-06  Score=65.76  Aligned_cols=39  Identities=15%  Similarity=0.281  Sum_probs=35.6

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      |+++|||+++|||++++++|+++|++|++++|++++.++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~   40 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTA   40 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHH
Confidence            689999999999999999999999999999998876544

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.20  E-value=4.5e-06  Score=61.08  Aligned_cols=57  Identities=23%  Similarity=0.266  Sum_probs=43.6

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHH---HHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNET---KQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~---~~ei~~~g~~~v~~~~~D  159 (159)
                      |+++|||+++|||.+++++|+++|+ .|++.+|+++..++.   .+++++.+.+ +..+++|
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   61 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAE-VTVVACD   61 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCe-EEEEECC
Confidence            5789999999999999999999997 677888876544332   3455555666 7777776

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1207|consensus

Probab=98.18  E-value=3.1e-06  Score=65.78  Aligned_cols=49  Identities=29%  Similarity=0.432  Sum_probs=45.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      .++.|+.+++||+..|||++++++|++.|++|+.++|+++.++.+++|.
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~   51 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET   51 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC
Confidence            3578999999999999999999999999999999999999988888764

>PRK07023 short chain dehydrogenase; Provisional

Probab=98.18  E-value=4.3e-06  Score=65.78  Aligned_cols=51  Identities=18%  Similarity=0.294  Sum_probs=39.1

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++||||++|||++++++|+++|++|++++|+.+.  +.   .+..+.+ +..+++|
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~--~~---~~~~~~~-~~~~~~D   53 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP--SL---AAAAGER-LAEVELD   53 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch--hh---hhccCCe-EEEEEec
Confidence            68999999999999999999999999999987643  11   1222444 6666665

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=98.17  E-value=5.4e-06  Score=68.12  Aligned_cols=59  Identities=22%  Similarity=0.321  Sum_probs=44.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D  159 (159)
                      .+|+++||||+++||+.++++|+++|++|++++|+.+..++..+.....+  .+ +.++++|
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D   64 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKER-LKLFKAD   64 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCc-eEEEeCC
Confidence            47899999999999999999999999999988888766554433222222  34 5666665

>PLN02583 cinnamoyl-CoA reductase

Probab=98.17  E-value=5.9e-06  Score=67.65  Aligned_cols=60  Identities=10%  Similarity=0.065  Sum_probs=42.8

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc--HHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG--NNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~--~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      -.+|+++||||+++||+.++++|+++|++|+++.|+.+.  .++..+++...+.+ +..+++|
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~-~~~~~~D   65 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEER-LKVFDVD   65 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCc-eEEEEec
Confidence            357899999999999999999999999999998886432  22223333222334 5566665

>PRK08017 oxidoreductase; Provisional

Probab=98.14  E-value=4.2e-06  Score=66.02  Aligned_cols=39  Identities=21%  Similarity=0.284  Sum_probs=35.2

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      |+++|||+++|||.++++.|+++|++|++++|+.++.++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~   41 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR   41 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH
Confidence            689999999999999999999999999999998765543

>KOG1478|consensus

Probab=98.13  E-value=7.6e-06  Score=66.87  Aligned_cols=60  Identities=18%  Similarity=0.190  Sum_probs=48.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-----EEEEEcCCCccHHHHHHHHHHcCCCe---EEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-----TLVCWDIDEKGNNETKQMLEEQGYKN---IHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-----~Vvi~~r~~~~~~~~~~ei~~~g~~~---v~~~~~D  159 (159)
                      ..|+++|||+++|+|.++|.+|.+..-     ++++.+|+.+++|+++..+++...++   +.++++|
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD   69 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVD   69 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEe
Confidence            468999999999999999999987542     46778999999999999998765421   5566665

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=98.13  E-value=8.5e-06  Score=67.93  Aligned_cols=43  Identities=16%  Similarity=0.227  Sum_probs=37.4

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      ++||.++||||+++||.+++++|+++|++|++++|+.....+.
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~   44 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNL   44 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhH
Confidence            4578999999999999999999999999999999877654443

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.10  E-value=2.3e-05  Score=67.46  Aligned_cols=59  Identities=15%  Similarity=0.233  Sum_probs=45.4

Q ss_pred             CCCCeEEEeCCCCCchHH--HHHHHHHCCCEEEEEcCCCcc------------HHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRE--LAKQFVQHKVTLVCWDIDEKG------------NNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~--ia~~la~~Ga~Vvi~~r~~~~------------~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      -.+|+++|||+++|+|.+  +|++| ++|++++++++..+.            .+++.+++++.|.. +..++||
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~-a~~i~~D  111 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLY-AKSINGD  111 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCc-eEEEEcC
Confidence            357999999999999999  89999 999998888753321            23455566666776 7788887

>PRK05693 short chain dehydrogenase; Provisional

Probab=98.09  E-value=4.6e-06  Score=66.96  Aligned_cols=38  Identities=26%  Similarity=0.422  Sum_probs=34.2

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      |+++||||++|||++++++|+++|++|++++|++++.+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~   39 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVE   39 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            68999999999999999999999999999998865443

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=98.09  E-value=8.5e-06  Score=67.55  Aligned_cols=40  Identities=13%  Similarity=0.067  Sum_probs=36.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .+.++|.++||||+++||.+++++|+++|++|++.+|+.+
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~   41 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS   41 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence            3567899999999999999999999999999999888653

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.09  E-value=9.7e-06  Score=66.86  Aligned_cols=52  Identities=13%  Similarity=0.314  Sum_probs=44.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCCC---ccHHHHHHHHHHcCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDE---KGNNETKQMLEEQGY  150 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~~---~~~~~~~~ei~~~g~  150 (159)
                      ++++|+++|+|+ +|+|++++..|++.|++ |.+++|+.   ++.+++++++.+.+.
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~  178 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP  178 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC
Confidence            467899999999 69999999999999986 99999987   677888887765543

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.08  E-value=1.5e-05  Score=61.13  Aligned_cols=56  Identities=20%  Similarity=0.324  Sum_probs=45.5

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC---CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKV-TLVCWDID---EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~---~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||||.+|||..+++.|+++|. +++++.|+   ....++..+++++.|.+ +.+++||
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~-v~~~~~D   61 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGAR-VEYVQCD   61 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-E-EEEEE--
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCc-eeeeccC
Confidence            689999999999999999999985 78999998   23456788899988988 9999987

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK05884 short chain dehydrogenase; Provisional

Probab=98.07  E-value=4.9e-06  Score=65.37  Aligned_cols=43  Identities=19%  Similarity=0.284  Sum_probs=37.5

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      .++||||++|||++++++|+++|++|++.+|+++++++..+++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~   44 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL   44 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence            4899999999999999999999999999999887776665543

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=98.06  E-value=1e-05  Score=67.19  Aligned_cols=58  Identities=16%  Similarity=0.310  Sum_probs=43.2

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHK--VTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++||+++||||+++||.+++++|+++|  ++|++.+|+....+++.+++.  +.+ +.++.+|
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~-~~~v~~D   61 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APC-LRFFIGD   61 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCc-EEEEEcc
Confidence            357899999999999999999999986  689989987655444433331  234 5666665

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=97.99  E-value=1.7e-05  Score=66.18  Aligned_cols=59  Identities=20%  Similarity=0.161  Sum_probs=44.8

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      -.+++++||||++.||..++++|+++|++|++++|+.+..+...+++.. +.+ +..+.+|
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~-~~~~~~D   66 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDR-LRLFRAD   66 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCe-EEEEECC
Confidence            3567899999999999999999999999999998887655554444322 334 5566655

>KOG1610|consensus

Probab=97.99  E-value=3.8e-05  Score=64.13  Aligned_cols=51  Identities=25%  Similarity=0.399  Sum_probs=45.1

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHH
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLE  146 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~  146 (159)
                      ..+..+|.|+||||.+|.|+.+|++|.++|.+|+..+.+++..+++..+.+
T Consensus        24 ~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~   74 (322)
T KOG1610|consen   24 LDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK   74 (322)
T ss_pred             ccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc
Confidence            456789999999999999999999999999999998888888787776664

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.97  E-value=2.8e-05  Score=67.14  Aligned_cols=37  Identities=35%  Similarity=0.720  Sum_probs=34.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      .+++|+++|||+++|||+++|+.|+++|++|++++++
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~  243 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVP  243 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4578999999999999999999999999999999884

>PRK07577 short chain dehydrogenase; Provisional

Probab=97.96  E-value=1.4e-05  Score=62.29  Aligned_cols=36  Identities=22%  Similarity=0.341  Sum_probs=33.3

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      .+|+++||||++|||++++++|+++|++|++++|+.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~   37 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSA   37 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCc
Confidence            578999999999999999999999999999988854

>PRK08219 short chain dehydrogenase; Provisional

Probab=97.94  E-value=1.8e-05  Score=61.06  Aligned_cols=41  Identities=27%  Similarity=0.351  Sum_probs=35.6

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .|+++||||++++|+.++++|+++ ++|++.+|+.+..++..
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~   43 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELA   43 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHH
Confidence            578999999999999999999999 99999999876554443

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=97.94  E-value=3.3e-05  Score=63.44  Aligned_cols=43  Identities=21%  Similarity=0.183  Sum_probs=37.3

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .+||+++||||+|.||..++++|+++|++|++..|+.+..++.
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   45 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKT   45 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHH
Confidence            3578999999999999999999999999999888877654443

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.94  E-value=2.1e-05  Score=80.44  Aligned_cols=35  Identities=17%  Similarity=0.359  Sum_probs=32.9

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQH-KVTLVCWDID  134 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~  134 (159)
                      ++++++||||++|||.++|++|+++ |++|++++|+
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence            4899999999999999999999998 6999999998

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK06953 short chain dehydrogenase; Provisional

Probab=97.92  E-value=1.7e-05  Score=61.79  Aligned_cols=39  Identities=26%  Similarity=0.457  Sum_probs=34.7

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      |+++|||+++|||++++++|+++|++|++++|+.+..++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~   40 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA   40 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            579999999999999999999999999999998665443

>PRK08309 short chain dehydrogenase; Provisional

Probab=97.91  E-value=3.2e-05  Score=59.60  Aligned_cols=54  Identities=11%  Similarity=0.067  Sum_probs=42.7

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||||+ |+|.+++++|+++|++|.+.+|+.++.+++...+.. +.+ +..+++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~-i~~~~~D   55 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PES-ITPLPLD   55 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCc-EEEEEcc
Confidence            58999998 888999999999999999999988776666655543 334 6666665

>PLN02240 UDP-glucose 4-epimerase

Probab=97.89  E-value=6e-05  Score=62.42  Aligned_cols=39  Identities=31%  Similarity=0.354  Sum_probs=34.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .+++|.++||||++++|..++++|+++|++|++.++...
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~   40 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDN   40 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCc
Confidence            456789999999999999999999999999999987543

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=97.86  E-value=4.6e-05  Score=62.28  Aligned_cols=40  Identities=28%  Similarity=0.302  Sum_probs=35.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      ++|.++||||+|.||..++++|.++|++|.+++|+.+..+
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~   42 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPK   42 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchh
Confidence            4689999999999999999999999999999888765433

>PLN02214 cinnamoyl-CoA reductase

Probab=97.84  E-value=7e-05  Score=62.62  Aligned_cols=39  Identities=21%  Similarity=0.216  Sum_probs=35.5

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      .++|.++||||+|.||..++++|.++|++|.+.+|+.+.
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~   46 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD   46 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence            457899999999999999999999999999999997654

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=97.84  E-value=3.2e-05  Score=61.61  Aligned_cols=42  Identities=12%  Similarity=0.255  Sum_probs=36.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      ...++.++|||++|++|+.++++|+++|++|++..|+.++.+
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~   55 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAK   55 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence            345789999999999999999999999999998888865543

>PLN02686 cinnamoyl-CoA reductase

Probab=97.83  E-value=5.7e-05  Score=63.90  Aligned_cols=44  Identities=11%  Similarity=0.212  Sum_probs=37.9

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      +.++|.++||||+++||..++++|+++|++|+++.|+.+..+++
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l   93 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL   93 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            56789999999999999999999999999999888876554443

>KOG1209|consensus

Probab=97.81  E-value=4.3e-05  Score=61.22  Aligned_cols=43  Identities=23%  Similarity=0.323  Sum_probs=36.8

Q ss_pred             CCCeEEEeCCC-CCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         100 EGEIILLTGAG-NGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       100 ~gk~~lITG~s-~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      ..|.++||||+ +|||.++|++|+++|+.|+.++|+.+...++.
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~   49 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLA   49 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHH
Confidence            45788899887 79999999999999999999999877665554

>PLN02572 UDP-sulfoquinovose synthase

Probab=97.80  E-value=9.8e-05  Score=64.23  Aligned_cols=38  Identities=13%  Similarity=0.136  Sum_probs=34.5

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI  133 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r  133 (159)
                      ....++|.++||||+|+||+.++++|+++|++|+++|+
T Consensus        42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~   79 (442)
T PLN02572         42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDN   79 (442)
T ss_pred             CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEec
Confidence            34577899999999999999999999999999999874

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.77  E-value=5.8e-05  Score=58.27  Aligned_cols=50  Identities=16%  Similarity=0.256  Sum_probs=45.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      +++++.++|.|+++++|+.+++.++++|++|.+++|+.+++++..+++++
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~   74 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRA   74 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh
Confidence            57789999999999999999999999999999999998888888877753

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PLN02650 dihydroflavonol-4-reductase

Probab=97.77  E-value=7.2e-05  Score=62.34  Aligned_cols=43  Identities=23%  Similarity=0.231  Sum_probs=37.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      ..|.++||||+|.||..++++|+++|++|++.+|+.+..++..
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~   46 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVK   46 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHH
Confidence            4678999999999999999999999999999888876555443

>PLN00198 anthocyanidin reductase; Provisional

Probab=97.76  E-value=0.0001  Score=60.98  Aligned_cols=42  Identities=12%  Similarity=0.051  Sum_probs=36.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      +.+++.++||||+|.||..++++|.++|++|++++|+.+...
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~   47 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQK   47 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHH
Confidence            456889999999999999999999999999988888765433

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=97.75  E-value=6.1e-05  Score=62.56  Aligned_cols=35  Identities=20%  Similarity=0.168  Sum_probs=32.4

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      |+++||||+|.||..++++|+++|++|++++|+.+
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~   35 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS   35 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence            58999999999999999999999999999998754

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>KOG1611|consensus

Probab=97.74  E-value=8e-05  Score=59.79  Aligned_cols=58  Identities=17%  Similarity=0.338  Sum_probs=40.4

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHH-CCCEEEE-EcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQ-HKVTLVC-WDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~-~Ga~Vvi-~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .|.++||||++|||..++++|.+ .|..+++ .+|+.+++.+..++......+ ++.+++|
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~r-vHii~Ld   62 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSR-VHIIQLD   62 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCc-eEEEEEe
Confidence            46799999999999999999986 4666666 466777653222222223455 8888776

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.74  E-value=0.00011  Score=65.66  Aligned_cols=61  Identities=28%  Similarity=0.448  Sum_probs=50.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D  159 (159)
                      .+.||+++||||+|.||.++|+++++.+. ++++.++++-+..+...+++..  ..+ ...+-+|
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~-~~~~igd  310 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELK-LRFYIGD  310 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcc-eEEEecc
Confidence            46799999999999999999999999986 5888999999999998888875  233 4555554

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=97.61  E-value=0.00014  Score=62.24  Aligned_cols=39  Identities=21%  Similarity=0.362  Sum_probs=35.3

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      ..++.++||||+|.||+.++++|.++|++|++.+|+.+.
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~   96 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSG   96 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhh
Confidence            457899999999999999999999999999999997654

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=97.52  E-value=0.00034  Score=57.62  Aligned_cols=34  Identities=26%  Similarity=0.272  Sum_probs=30.5

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .++||||+++||+.++++|+++|++|++.++..+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~   35 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCN   35 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCC
Confidence            5899999999999999999999999998876543

>KOG1502|consensus

Probab=97.50  E-value=0.00029  Score=59.32  Aligned_cols=59  Identities=24%  Similarity=0.279  Sum_probs=45.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH--HHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET--KQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~--~~ei~~~g~~~v~~~~~D  159 (159)
                      .++.+.||||+|=||..++++|.++|+.|....|++++.+..  ..+++..+-+ ...+..|
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~-l~l~~aD   65 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKER-LKLFKAD   65 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCccc-ceEEecc
Confidence            678999999999999999999999999999999998774442  4444433333 4555554

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.47  E-value=0.00034  Score=51.32  Aligned_cols=48  Identities=17%  Similarity=0.284  Sum_probs=44.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCCCccHHHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGNNETKQML  145 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~~~~~~~~~~ei  145 (159)
                      .+++++.++|-|+ ||.|++++..|++.|++ |.++.|+.++++++++++
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~   56 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF   56 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence            4688999999997 99999999999999987 999999999999998888

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=97.44  E-value=0.00053  Score=55.31  Aligned_cols=61  Identities=21%  Similarity=0.165  Sum_probs=49.0

Q ss_pred             CCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..++||..+|+|-+  ++|+..+|+.+.++|++++..+.++ ++++-++++-+.-+. ...++||
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s-~~v~~cD   64 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGS-DLVLPCD   64 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccC-CeEEecC
Confidence            46899999999965  6999999999999999999999887 566656666554333 5778887

>TIGR01746 Thioester-redct thioester reductase domain

Probab=97.36  E-value=0.0006  Score=55.94  Aligned_cols=34  Identities=24%  Similarity=0.435  Sum_probs=30.9

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCCCc
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHK--VTLVCWDIDEK  136 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~~  136 (159)
                      +++|||++|++|..++++|.++|  ++|++..|+.+
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~   36 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAAS   36 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence            47999999999999999999999  78999998765

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.35  E-value=0.00063  Score=58.74  Aligned_cols=53  Identities=30%  Similarity=0.375  Sum_probs=42.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHHHHcCCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQMLEEQGYK  151 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei~~~g~~  151 (159)
                      ++++|.++|+|+++ +|.++|+.|+++|++|.++|++. +..++..+++++.|.+
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~   55 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIE   55 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCE
Confidence            46789999999877 99999999999999999999975 4455555666554543

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=97.34  E-value=0.00047  Score=55.79  Aligned_cols=34  Identities=26%  Similarity=0.342  Sum_probs=29.9

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .++||||+++||..++++|.++|++|++.++...
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~   34 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSN   34 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCc
Confidence            3789999999999999999999999988876443

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=97.32  E-value=0.00023  Score=56.04  Aligned_cols=39  Identities=21%  Similarity=0.367  Sum_probs=34.3

Q ss_pred             CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC
Q psy2040         111 NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG  149 (159)
Q Consensus       111 ~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g  149 (159)
                      +|||+++|++|+++|++|++++|+.++.++..+++.++.
T Consensus         6 ~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~   44 (241)
T PF13561_consen    6 SGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEY   44 (241)
T ss_dssp             SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHT
T ss_pred             CChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHc
Confidence            999999999999999999999999988777777776553

...

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=97.30  E-value=0.00035  Score=54.48  Aligned_cols=33  Identities=27%  Similarity=0.417  Sum_probs=27.2

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHK--VTLVCWDID  134 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~  134 (159)
                      ++++|||+++|||+++|++|+++|  ..|...+|+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~   35 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRH   35 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccC
Confidence            478999999999999999999985  556555554

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.29  E-value=0.00061  Score=58.77  Aligned_cols=53  Identities=23%  Similarity=0.229  Sum_probs=42.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK  151 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~  151 (159)
                      ++++|.++|||+++ +|.+.|+.|++.|++|++.|++.....+..+++++.|.+
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~   54 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIK   54 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCE
Confidence            35789999999976 999999999999999999998765545555566665544

>PRK07578 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.00034  Score=53.47  Aligned_cols=32  Identities=22%  Similarity=0.361  Sum_probs=29.4

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      +++|||+++|||++++++|+++ ++|++.+|+.
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~   33 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSS   33 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCC
Confidence            6899999999999999999999 9999988854

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=97.27  E-value=0.00098  Score=55.71  Aligned_cols=39  Identities=23%  Similarity=0.227  Sum_probs=35.1

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .+++|.++||||+|=||..++++|.++|++|++++|...
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~   50 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFST   50 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            456789999999999999999999999999999988654

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.25  E-value=0.00045  Score=59.66  Aligned_cols=37  Identities=22%  Similarity=0.355  Sum_probs=33.0

Q ss_pred             CCCCCeEEEeCC---------------CCC-chHHHHHHHHHCCCEEEEEcCC
Q psy2040          98 SLEGEIILLTGA---------------GNG-IGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        98 ~l~gk~~lITG~---------------s~G-IG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      ++.||+++||||               |+| +|+++|++++++|++|++++++
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~  237 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGP  237 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCC
Confidence            578999999999               555 9999999999999999988765

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.22  E-value=0.00061  Score=55.76  Aligned_cols=49  Identities=18%  Similarity=0.319  Sum_probs=43.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      ++.+|.++|.|+ ||+|+++++.|++.| .+|.+++|+.++.+++++++..
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~  169 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGA  169 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh
Confidence            567899999997 899999999999999 7899999999888888887753

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.18  E-value=0.0006  Score=60.83  Aligned_cols=47  Identities=21%  Similarity=0.328  Sum_probs=41.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      ++++|.++|+|+ +|+|++++..|++.|++|++++|+.++.+++.+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            467899999999 69999999999999999999999988888877654

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=97.15  E-value=0.00038  Score=57.85  Aligned_cols=45  Identities=36%  Similarity=0.562  Sum_probs=39.2

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHHc
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEEQ  148 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~~  148 (159)
                      ++||||+|.||.++|+++++.|. ++++.|+++.++-++.+++++.
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~   46 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSR   46 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHH
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhc
Confidence            68999999999999999999985 7999999999999998888643

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.11  E-value=0.001  Score=54.16  Aligned_cols=49  Identities=14%  Similarity=0.247  Sum_probs=43.1

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ  148 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~  148 (159)
                      ..+|.++++|+ +|+|++++..+++.|++|.+++|++++.+++++++++.
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~  163 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY  163 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc
Confidence            45789999998 69999999999999999999999998888888877553

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=97.07  E-value=0.00073  Score=54.92  Aligned_cols=35  Identities=14%  Similarity=0.209  Sum_probs=32.1

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      .++|||++|+||..++++|+++|++|++++|+++.
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSD   36 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcc
Confidence            68999999999999999999999999999987554

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=97.06  E-value=0.0012  Score=54.83  Aligned_cols=33  Identities=27%  Similarity=0.329  Sum_probs=28.3

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEE-EEcCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLV-CWDID  134 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vv-i~~r~  134 (159)
                      |.++||||+++||..++++|.++|++++ +.++.
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~   35 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKL   35 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecC
Confidence            5799999999999999999999998754 45654

>KOG1371|consensus

Probab=97.06  E-value=0.0022  Score=54.01  Aligned_cols=58  Identities=17%  Similarity=0.221  Sum_probs=43.4

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc---CCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ---GYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~---g~~~v~~~~~D  159 (159)
                      ++.++||||++=||..++.+|.++|+.|+++|.-.....+....+++.   +.+ +.++++|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~-v~f~~~D   62 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKS-VFFVEGD   62 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCc-eEEEEec
Confidence            578999999999999999999999999999987443333333333332   345 7777776

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.05  E-value=0.00096  Score=56.56  Aligned_cols=49  Identities=16%  Similarity=0.209  Sum_probs=42.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHC-C-CEEEEEcCCCccHHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQH-K-VTLVCWDIDEKGNNETKQMLE  146 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~-G-a~Vvi~~r~~~~~~~~~~ei~  146 (159)
                      ++++|+++|||++|.||..+|++|+++ | .++++++|+++++++..+++.
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~  202 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG  202 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc
Confidence            688999999999999999999999864 5 489999999888887777663

>PLN02427 UDP-apiose/xylose synthase

Probab=97.05  E-value=0.0013  Score=55.59  Aligned_cols=40  Identities=20%  Similarity=0.360  Sum_probs=34.1

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCCcc
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDEKG  137 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~~~  137 (159)
                      +.+.++++||||+|-||..++++|.++ |++|++++|+.++
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~   51 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDK   51 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchh
Confidence            345568999999999999999999998 5899989887544

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.05  E-value=0.00099  Score=50.04  Aligned_cols=36  Identities=28%  Similarity=0.335  Sum_probs=33.4

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      ++|+||+|.+|+.++++|.++|++|....|++++.+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~   36 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAE   36 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcc
Confidence            689999999999999999999999999999987655

...

>PLN02778 3,5-epimerase/4-reductase

Probab=97.02  E-value=0.0031  Score=51.88  Aligned_cols=51  Identities=12%  Similarity=0.027  Sum_probs=40.5

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK  151 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~  151 (159)
                      .+.++||||+|-||..++++|.++|.+|.....+.+..+.+...++..+.+
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~~~D   59 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPT   59 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhcCCC
Confidence            367999999999999999999999999986655555556666666655555

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=96.92  E-value=0.0024  Score=51.42  Aligned_cols=32  Identities=22%  Similarity=0.360  Sum_probs=28.2

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHK--VTLVCWDID  134 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~  134 (159)
                      .++||||+|+||..++++|.++|  .+|++.++.
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~   34 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKL   34 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCC
Confidence            37999999999999999999987  688888764

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=96.79  E-value=0.0022  Score=55.34  Aligned_cols=37  Identities=24%  Similarity=0.363  Sum_probs=32.8

Q ss_pred             CCCCCeEEEeCC---------------CCC-chHHHHHHHHHCCCEEEEEcCC
Q psy2040          98 SLEGEIILLTGA---------------GNG-IGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        98 ~l~gk~~lITG~---------------s~G-IG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      +++||.++||||               |+| +|.++|++++++|++|++++++
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~  234 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGP  234 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCC
Confidence            478999999999               667 9999999999999999987653

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=96.79  E-value=0.0051  Score=49.31  Aligned_cols=48  Identities=25%  Similarity=0.383  Sum_probs=36.5

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC---ccHHHHHHHHHHcCCC
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE---KGNNETKQMLEEQGYK  151 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~---~~~~~~~~ei~~~g~~  151 (159)
                      ++||||+|.||..++++|.++|++|++.+|+.   ...+++.+.++....+
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d   52 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAIRPD   52 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhCCCC
Confidence            78999999999999999999999999988852   2334454555443334

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.78  E-value=0.0033  Score=46.16  Aligned_cols=48  Identities=21%  Similarity=0.321  Sum_probs=40.8

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHHHHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      .+++.+.++|+ +++|.++++.+++.| .+|.+++|+.++.++.++++..
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~   65 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGE   65 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence            56788999998 899999999999996 7899999998888877776653

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.76  E-value=0.0028  Score=49.61  Aligned_cols=48  Identities=27%  Similarity=0.551  Sum_probs=41.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      .+++||.+.|.|.+ .+|+.+|+.|.+.|++|++.|+++++.++..+++
T Consensus        24 ~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~   71 (200)
T cd01075          24 DSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELF   71 (200)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            46889999999995 8999999999999999999999987777666543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=96.73  E-value=0.0017  Score=51.86  Aligned_cols=34  Identities=24%  Similarity=0.350  Sum_probs=31.3

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      ++||||+|.||..++++|+++|++|++.+|+.+.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   34 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPA   34 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCC
Confidence            5899999999999999999999999999997654

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN00016 RNA-binding protein; Provisional

Probab=96.63  E-value=0.0057  Score=51.74  Aligned_cols=38  Identities=24%  Similarity=0.291  Sum_probs=34.4

Q ss_pred             CCCeEEEe----CCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         100 EGEIILLT----GAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       100 ~gk~~lIT----G~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      ..+.++||    ||+|-||..++++|.++|++|.+++|+.+.
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~   92 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP   92 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc
Confidence            45789999    999999999999999999999999998654

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.60  E-value=0.0032  Score=51.85  Aligned_cols=35  Identities=20%  Similarity=0.405  Sum_probs=32.0

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      .++||||+|-+|+.++++|.++|++|.+.+|+.++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~   36 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRK   36 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHH
Confidence            58999999999999999999999999999987543

>PLN02206 UDP-glucuronate decarboxylase

Probab=96.55  E-value=0.0069  Score=52.83  Aligned_cols=36  Identities=17%  Similarity=0.260  Sum_probs=32.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      +++.++||||+|-||..++++|.++|.+|+++++..
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~  153 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFF  153 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCC
Confidence            457899999999999999999999999999988753

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=96.53  E-value=0.0031  Score=50.88  Aligned_cols=33  Identities=21%  Similarity=0.288  Sum_probs=30.9

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ++||||+|.+|+.++++|.++|++|.+..|+++
T Consensus         2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~   34 (285)
T TIGR03649         2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSS   34 (285)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCc
Confidence            789999999999999999999999999999864

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=96.49  E-value=0.0039  Score=49.29  Aligned_cols=40  Identities=15%  Similarity=0.184  Sum_probs=35.6

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .++|||+++.+|..++++|.++|++|....|+.++.....
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~   41 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA   41 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc
Confidence            5899999999999999999999999999999977665543

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.43  E-value=0.013  Score=48.37  Aligned_cols=50  Identities=22%  Similarity=0.323  Sum_probs=43.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHHc
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEEQ  148 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~~  148 (159)
                      +..+|.++|-|+ ||.|++++..+++.|+ +|.+++|+.++.++++++++..
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~  174 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR  174 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence            456788999987 8899999999999997 7999999999999998887544

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.42  E-value=0.0051  Score=53.06  Aligned_cols=53  Identities=19%  Similarity=0.283  Sum_probs=41.8

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.++|-|+ |++|+.+|+.++++| .+|.++||+.++++++.+...   .+ +.+.++|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~---~~-v~~~~vD   55 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG---GK-VEALQVD   55 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc---cc-ceeEEec
Confidence            46788888 999999999999999 899999999887777765432   23 5555555

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=96.42  E-value=0.0086  Score=49.65  Aligned_cols=32  Identities=25%  Similarity=0.347  Sum_probs=27.0

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVT-LVCWDID  134 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~  134 (159)
                      .++||||+|+||..++++|.++|.+ |+.+++.
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~   34 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKL   34 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCC
Confidence            5899999999999999999999976 4445553

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.34  E-value=0.0061  Score=53.76  Aligned_cols=47  Identities=13%  Similarity=0.276  Sum_probs=40.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      ++++|.++++|+ +|+|++++..+++.|++|.+.+|+.++.++..+++
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~  375 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC  375 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            457899999996 79999999999999999999999987777766554

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=96.33  E-value=0.0072  Score=50.23  Aligned_cols=35  Identities=20%  Similarity=0.378  Sum_probs=30.7

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCCc
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDEK  136 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~~  136 (159)
                      +.++||||+|-||..++++|.++ |++|+..+|+.+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~   37 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTD   37 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHH
Confidence            46999999999999999999886 699999988653

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=96.31  E-value=0.012  Score=51.15  Aligned_cols=35  Identities=17%  Similarity=0.191  Sum_probs=32.0

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      .+.++||||+|-||..++++|.++|++|++++|..
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~  154 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFF  154 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            46799999999999999999999999999998753

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=96.31  E-value=0.0056  Score=51.82  Aligned_cols=36  Identities=25%  Similarity=0.309  Sum_probs=32.9

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      .++.++||||+|-||..+++.|.++|++|..++|..
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~   55 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKK   55 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecc
Confidence            578899999999999999999999999999988753

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.27  E-value=0.011  Score=46.23  Aligned_cols=46  Identities=24%  Similarity=0.382  Sum_probs=38.1

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK  151 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~  151 (159)
                      ++|+|++|.+|+.+++.|.+.|++|.+..|+.  .++..++++..|..
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~--~~~~~~~l~~~g~~   46 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP--SSDRAQQLQALGAE   46 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS--HHHHHHHHHHTTTE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEecc--chhhhhhhhcccce
Confidence            68999999999999999999999999999988  34445566666654

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=96.18  E-value=0.011  Score=53.86  Aligned_cols=38  Identities=18%  Similarity=0.327  Sum_probs=33.6

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCCc
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDEK  136 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~~  136 (159)
                      .+++.++||||+|-||..++++|.++ |++|+..+|+..
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~  351 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSD  351 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCch
Confidence            45788999999999999999999985 799999998654

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=96.15  E-value=0.019  Score=46.95  Aligned_cols=48  Identities=19%  Similarity=0.297  Sum_probs=35.3

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-------ccHHHHHHHHHHcCCC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-------KGNNETKQMLEEQGYK  151 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-------~~~~~~~~ei~~~g~~  151 (159)
                      .++||||+|=||..++++|.++| +|+..+|..       ...+.+.+.+++.+.+
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D   56 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHSTDYCGDFSNPEGVAETVRKIRPD   56 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccccccCCCCCHHHHHHHHHhcCCC
Confidence            58999999999999999999999 788787743       2233444445544455

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=96.13  E-value=0.0079  Score=48.45  Aligned_cols=33  Identities=24%  Similarity=0.292  Sum_probs=30.7

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ++|||++|-||..++++|.++|++|...+|...
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~   35 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRD   35 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCc
Confidence            899999999999999999999999999998544

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=96.10  E-value=0.018  Score=52.44  Aligned_cols=36  Identities=28%  Similarity=0.381  Sum_probs=31.6

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHC--CCEEEEEcCC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDID  134 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~--Ga~Vvi~~r~  134 (159)
                      .++|.++||||+|-||..++++|.++  |++|+..++.
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~   41 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKL   41 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence            45689999999999999999999987  6788888874

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=96.07  E-value=0.01  Score=49.64  Aligned_cols=38  Identities=24%  Similarity=0.347  Sum_probs=32.9

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      .++||||++=||..++.+|.+.|.+|++.|.-.....+
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~   39 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKI   39 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHH
Confidence            68999999999999999999999999999985544333

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.03  E-value=0.018  Score=47.76  Aligned_cols=51  Identities=20%  Similarity=0.365  Sum_probs=45.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHHcC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEEQG  149 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~~g  149 (159)
                      +..|+.++|-|+ ||-+++++..|++.|+ +++++.|+.++++++++.+.+.+
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~  174 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG  174 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc
Confidence            446889999987 8999999999999995 79999999999999999888655

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=95.94  E-value=0.01  Score=48.34  Aligned_cols=30  Identities=27%  Similarity=0.377  Sum_probs=26.0

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEE-EcC
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVC-WDI  133 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi-~~r  133 (159)
                      ++||||+|-||..++++|+++|+++++ .++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~   32 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN   32 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecC
Confidence            689999999999999999999986555 444

>PRK07201 short chain dehydrogenase; Provisional

Probab=95.87  E-value=0.024  Score=50.95  Aligned_cols=33  Identities=21%  Similarity=0.312  Sum_probs=30.3

Q ss_pred             eEEEeCCCCCchHHHHHHHH--HCCCEEEEEcCCC
Q psy2040         103 IILLTGAGNGIGRELAKQFV--QHKVTLVCWDIDE  135 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la--~~Ga~Vvi~~r~~  135 (159)
                      .++||||+|-||..++++|.  ++|.+|.+++|+.
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~   36 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQ   36 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcc
Confidence            58999999999999999999  5899999999965

>PRK09620 hypothetical protein; Provisional

Probab=95.84  E-value=0.015  Score=46.68  Aligned_cols=35  Identities=23%  Similarity=0.513  Sum_probs=30.7

Q ss_pred             CCCCeEEEeCCC----------------CCchHHHHHHHHHCCCEEEEEcC
Q psy2040          99 LEGEIILLTGAG----------------NGIGRELAKQFVQHKVTLVCWDI  133 (159)
Q Consensus        99 l~gk~~lITG~s----------------~GIG~~ia~~la~~Ga~Vvi~~r  133 (159)
                      +.||.++||+|.                |-+|..+|+++.++|++|++++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g   51 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHG   51 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeC
Confidence            468999999875                88999999999999999987764

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.82  E-value=0.034  Score=41.35  Aligned_cols=47  Identities=17%  Similarity=0.222  Sum_probs=40.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .+++||.+.|-|.+.-.|+.++..|.++|++|.+++++...+++..+
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~v~   70 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSKVH   70 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHHHh
Confidence            37899999999999999999999999999999999877655555443

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.80  E-value=0.034  Score=45.90  Aligned_cols=49  Identities=22%  Similarity=0.398  Sum_probs=42.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      +.++|.++|-|+ ||-+++++..|++.|+ ++.+++|+.++.+++++.+..
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~  173 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN  173 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence            356788999987 9999999999999997 688999999999998887753

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.80  E-value=0.021  Score=46.97  Aligned_cols=49  Identities=16%  Similarity=0.148  Sum_probs=41.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      ++++|.++|-|+ ||-|++++..|++.|+ +|.++.|+.++.+++++++..
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~  171 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQ  171 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhh
Confidence            356888888876 9999999999999997 699999999998888877643

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.75  E-value=0.026  Score=43.20  Aligned_cols=45  Identities=22%  Similarity=0.370  Sum_probs=38.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .++.||.++|.|++.-.|..+++.|.++|++|.++.|+.+++.+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~~   84 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKEH   84 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHHH
Confidence            468999999999966579999999999999999999987555443

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=95.63  E-value=0.014  Score=47.31  Aligned_cols=31  Identities=26%  Similarity=0.392  Sum_probs=27.7

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKV-TLVCWDID  134 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~  134 (159)
                      ++||||+|.||..++++|.++|+ .|++++|.
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~   32 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNL   32 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecC
Confidence            58999999999999999999998 68877764

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=95.46  E-value=0.035  Score=42.78  Aligned_cols=33  Identities=27%  Similarity=0.433  Sum_probs=29.0

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ++||||+|=+|..++++|.++|..|+...++..
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~   33 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSN   33 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCST
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccc
Confidence            689999999999999999999999887666543

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=95.43  E-value=0.027  Score=46.57  Aligned_cols=41  Identities=12%  Similarity=0.212  Sum_probs=36.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      ++.||++.|.|. |++|+++|+.+...|++|.+.+|++++.+
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~  188 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA  188 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            678999999999 66999999999999999999999876543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=95.35  E-value=0.047  Score=43.99  Aligned_cols=29  Identities=10%  Similarity=0.214  Sum_probs=25.4

Q ss_pred             EEeCCCCCchHHHHHHHHHCCCEEEEEcC
Q psy2040         105 LLTGAGNGIGRELAKQFVQHKVTLVCWDI  133 (159)
Q Consensus       105 lITG~s~GIG~~ia~~la~~Ga~Vvi~~r  133 (159)
                      +||||+|-||..+++.|.++|.+|+++.+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~   29 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRT   29 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeec
Confidence            58999999999999999999998776543

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.13  E-value=0.063  Score=40.89  Aligned_cols=46  Identities=24%  Similarity=0.383  Sum_probs=36.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      +++||.++|-|.+.-+|+.++..|.++|+.|.++..+.+.+++..+
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~   78 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR   78 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee
Confidence            6899999999999999999999999999999998887766665543

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>KOG1430|consensus

Probab=95.08  E-value=0.049  Score=46.62  Aligned_cols=37  Identities=16%  Similarity=0.328  Sum_probs=33.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCCCc
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHK--VTLVCWDIDEK  136 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~~  136 (159)
                      ++.+++||||+|=+|+.++.+|.++|  ..+.+.|..+.
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~   41 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPT   41 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcc
Confidence            46799999999999999999999999  78888888664

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.04  E-value=0.075  Score=44.44  Aligned_cols=47  Identities=15%  Similarity=0.254  Sum_probs=40.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .++.||.+.+-|.++-+|+.+|..|.++|++|.++.++....++.++
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~  201 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCR  201 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHh
Confidence            47899999999999999999999999999999999877665555443

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.99  E-value=0.071  Score=44.27  Aligned_cols=43  Identities=19%  Similarity=0.332  Sum_probs=37.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      +++||.++|.|.+.=.|+.++..|.++|++|.++.++...+++
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~  197 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMAS  197 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence            6899999999999999999999999999999999886544443

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=94.99  E-value=0.052  Score=43.16  Aligned_cols=40  Identities=18%  Similarity=0.282  Sum_probs=34.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .++.++|+|+++++|..+++.+...|++|+++++++++.+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~  178 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLE  178 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence            4689999999999999999999999999998888755443

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.98  E-value=0.08  Score=46.23  Aligned_cols=53  Identities=15%  Similarity=0.215  Sum_probs=41.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHHHHcCCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQMLEEQGYK  151 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei~~~g~~  151 (159)
                      ++.+|.++|.|+ |++|.+.|+.|+++|++|.+.++++ +..+...+++++.|.+
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~   66 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGAT   66 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCE
Confidence            467889999987 7799999999999999999998654 3344555667766654

>PRK06849 hypothetical protein; Provisional

Probab=94.95  E-value=0.063  Score=45.67  Aligned_cols=36  Identities=28%  Similarity=0.286  Sum_probs=32.9

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      +.++++|||++.++|..+++.|.+.|.+|++++.++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~   38 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLK   38 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            358999999999999999999999999999988765

>PRK05865 hypothetical protein; Provisional

Probab=94.93  E-value=0.032  Score=52.62  Aligned_cols=33  Identities=24%  Similarity=0.322  Sum_probs=30.6

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      .++||||++.||..++++|.++|++|++++|+.
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~   34 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHR   34 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCc
Confidence            589999999999999999999999999988863

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=94.84  E-value=0.046  Score=43.61  Aligned_cols=31  Identities=10%  Similarity=0.210  Sum_probs=25.6

Q ss_pred             eEEEeC-CCCCchHHHHHHHHHCCCEEEEEcC
Q psy2040         103 IILLTG-AGNGIGRELAKQFVQHKVTLVCWDI  133 (159)
Q Consensus       103 ~~lITG-~s~GIG~~ia~~la~~Ga~Vvi~~r  133 (159)
                      +=.||. +++|||+++|++|+++|++|+++++
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~   47 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTT   47 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcC
Confidence            444555 4678999999999999999999875

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=94.83  E-value=0.1  Score=40.74  Aligned_cols=52  Identities=29%  Similarity=0.294  Sum_probs=40.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC-------------------CccHHHHHHHHHHcCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID-------------------EKGNNETKQMLEEQGY  150 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~-------------------~~~~~~~~~ei~~~g~  150 (159)
                      .+.++.++|-|+ +|+|.++++.|++.|. ++.++|.+                   ..+.+.+.+.+++.+.
T Consensus        18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np   89 (202)
T TIGR02356        18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNS   89 (202)
T ss_pred             HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCC
Confidence            466788888874 8999999999999997 78888876                   2345666677766554

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=94.82  E-value=0.043  Score=46.55  Aligned_cols=52  Identities=17%  Similarity=0.307  Sum_probs=37.7

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++|-|+ |.+|+.+++.|++++-  +|++.+|+.+++++..+++  .+.+ +...++|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~-~~~~~~d   54 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDR-VEAVQVD   54 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTT-EEEEE--
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccc-eeEEEEe
Confidence            578899 9999999999999874  7999999999888887765  3334 5566554

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=94.81  E-value=0.059  Score=41.42  Aligned_cols=43  Identities=19%  Similarity=0.387  Sum_probs=34.0

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      +-|-|+ |-+|.++|..++..|++|.+.|++++.+++..+.+++
T Consensus         2 V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    2 VAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             EEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            445565 8899999999999999999999999887776666543

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=94.78  E-value=0.054  Score=44.66  Aligned_cols=42  Identities=12%  Similarity=0.163  Sum_probs=34.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|+|+++++|...++-....|++|+.+++++++.+.+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~  192 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLL  192 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999998887778899998888776554433

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=94.70  E-value=0.066  Score=42.66  Aligned_cols=40  Identities=15%  Similarity=0.297  Sum_probs=34.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .|+.++|+|+++++|.++++.+.+.|++|++.++++++.+
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  183 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAE  183 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            4789999999999999999999999999999888665433

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08293 PTGR2 Prostaglandin reductase

Probab=94.57  E-value=0.066  Score=43.99  Aligned_cols=41  Identities=10%  Similarity=0.008  Sum_probs=33.4

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNET  141 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~  141 (159)
                      |++++|+|+++|+|...++.....|+ +|+.+++++++.+.+
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~  196 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLL  196 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            48999999999999998877777898 798888876654444

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=94.53  E-value=0.076  Score=42.97  Aligned_cols=40  Identities=20%  Similarity=0.339  Sum_probs=34.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .++.++|+|+++++|.++++.+...|++|+..++++++.+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~  201 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLK  201 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHH
Confidence            4678999999999999999999999999988887765433

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=94.51  E-value=0.056  Score=41.30  Aligned_cols=42  Identities=17%  Similarity=0.269  Sum_probs=31.8

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      ..+.||.++|.|- +.+|+.+|+.+...|++|.+++.++-++-
T Consensus        19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~al   60 (162)
T PF00670_consen   19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRAL   60 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHH
T ss_pred             eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHH
Confidence            3578999999987 78999999999999999999999885433

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=94.47  E-value=0.072  Score=46.31  Aligned_cols=47  Identities=11%  Similarity=0.176  Sum_probs=41.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei  145 (159)
                      ++.+|.+++-|+ ||.|+.+++.|++.|+ ++.++.|+.++++++++++
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~  225 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF  225 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence            577899999988 9999999999999995 6999999988888887765

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=94.47  E-value=0.056  Score=43.16  Aligned_cols=33  Identities=15%  Similarity=0.273  Sum_probs=28.2

Q ss_pred             CeEEEeCCCCC-chHHHHHHHHHCCCEEEEEcCC
Q psy2040         102 EIILLTGAGNG-IGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus       102 k~~lITG~s~G-IG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      .+-.||+.|+| +|.++|++|+++|++|++++++
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~   49 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTK   49 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECc
Confidence            36678877776 9999999999999999988764

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=94.46  E-value=0.074  Score=43.55  Aligned_cols=40  Identities=13%  Similarity=0.172  Sum_probs=33.1

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .|++++|+|+++++|...++.....|++|+.+++++++.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~  177 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVA  177 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            4789999999999999988777788999988877665433

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=94.39  E-value=0.057  Score=44.75  Aligned_cols=37  Identities=22%  Similarity=0.278  Sum_probs=33.0

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      +++|||++=||++++.+|.+.|.+|.+..|++.+.++
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~   37 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQ   37 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhh
Confidence            5799999999999999999999999999998766543

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=94.38  E-value=0.052  Score=44.46  Aligned_cols=33  Identities=18%  Similarity=0.324  Sum_probs=29.1

Q ss_pred             EEeCCCCCchHHHHHHHHHCC--CEEEEEcCCCcc
Q psy2040         105 LLTGAGNGIGRELAKQFVQHK--VTLVCWDIDEKG  137 (159)
Q Consensus       105 lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~~~  137 (159)
                      +||||+|=+|..++++|.++|  .+|.+.|+++..
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~   35 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPP   35 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccc
Confidence            589999999999999999999  788888886543

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK12320 hypothetical protein; Provisional

Probab=94.38  E-value=0.055  Score=50.03  Aligned_cols=33  Identities=24%  Similarity=0.338  Sum_probs=30.4

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      .++||||+|-||..++++|.++|++|++.++++
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~   34 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHP   34 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCh
Confidence            589999999999999999999999999988753

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=94.36  E-value=0.14  Score=42.80  Aligned_cols=50  Identities=20%  Similarity=0.326  Sum_probs=42.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHHHc
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLEEQ  148 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~~~  148 (159)
                      +-.++.+.|.|+ |++|..+|..++..|.  .+++.|++++.++..+.+++..
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~   54 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHA   54 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhh
Confidence            345678999998 9999999999999986  7999999999888888887653

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=94.35  E-value=0.094  Score=41.23  Aligned_cols=42  Identities=17%  Similarity=0.188  Sum_probs=36.1

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM  144 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~e  144 (159)
                      .+.|.||++.+|.+++..|++.|.+|.+.+|++++.++..++
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            367888889999999999999999999999998877766554

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK04148 hypothetical protein; Provisional

Probab=94.30  E-value=0.13  Score=38.19  Aligned_cols=40  Identities=23%  Similarity=0.346  Sum_probs=32.9

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      +++.++.-|.+  .|.++|..|++.|.+|+.+|.+++..+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a   55 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKA   55 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            35678888886  77888999999999999999998754444

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=94.27  E-value=0.15  Score=43.08  Aligned_cols=54  Identities=20%  Similarity=0.297  Sum_probs=42.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCC---------------------ccHHHHHHHHHHcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDE---------------------KGNNETKQMLEEQGYK  151 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~---------------------~~~~~~~~ei~~~g~~  151 (159)
                      ..++++.++|.|+ ||+|..+|+.|++.|. ++.++|++.                     .+.+.+++.+++.+..
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~   95 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSE   95 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCC
Confidence            3567888999987 8899999999999997 788898863                     2455666777776543

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=94.27  E-value=0.29  Score=37.26  Aligned_cols=44  Identities=20%  Similarity=0.386  Sum_probs=36.4

Q ss_pred             CCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040          94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus        94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      .....+.||++.|.|. |.||+++|+.+...|++|+..++.....
T Consensus        29 ~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~   72 (178)
T PF02826_consen   29 FPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPE   72 (178)
T ss_dssp             TTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHH
T ss_pred             CCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChh
Confidence            3456789999999976 9999999999999999999999987643

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=94.24  E-value=0.05  Score=36.57  Aligned_cols=33  Identities=15%  Similarity=0.151  Sum_probs=21.5

Q ss_pred             CCeEEEeCCCCCchHHHHHHHH-HCCCEEEEEcC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFV-QHKVTLVCWDI  133 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la-~~Ga~Vvi~~r  133 (159)
                      .|.++|+|+|+|.|.+..-.++ ..|++.+.+..
T Consensus        39 pK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~f   72 (78)
T PF12242_consen   39 PKKVLVIGASTGYGLASRIAAAFGAGADTIGVSF   72 (78)
T ss_dssp             -SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE-
T ss_pred             CceEEEEecCCcccHHHHHHHHhcCCCCEEEEee
Confidence            3899999999999999544444 66777766654

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=94.22  E-value=0.098  Score=42.15  Aligned_cols=40  Identities=25%  Similarity=0.353  Sum_probs=34.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .++.++|+|+++++|.++++.+...|++++++++++++.+
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~  205 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLE  205 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            5789999999999999999999999999998888765443

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.21  E-value=0.16  Score=42.14  Aligned_cols=47  Identities=17%  Similarity=0.159  Sum_probs=40.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .+++||.++|.|.|.=.|+.++..|.++|+.|.++.+....+++..+
T Consensus       155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~~  201 (285)
T PRK10792        155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHHVR  201 (285)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHHHh
Confidence            36889999999999999999999999999999999876655554433

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=94.20  E-value=0.087  Score=44.06  Aligned_cols=41  Identities=12%  Similarity=0.186  Sum_probs=33.9

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      .|++++|+|+++++|...++.....|++|+.+++++++.+.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~  198 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDL  198 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            47899999999999999887777889998888777655443

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=94.18  E-value=0.093  Score=42.62  Aligned_cols=39  Identities=13%  Similarity=0.233  Sum_probs=32.7

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      .|++++|+|+++++|...++.....|++|+.+++++++.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~  181 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKV  181 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            478999999999999998877778899998887766543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.16  E-value=0.08  Score=35.74  Aligned_cols=41  Identities=12%  Similarity=0.199  Sum_probs=33.8

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCC---CEEEEE-cCCCccHHHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHK---VTLVCW-DIDEKGNNETKQML  145 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~G---a~Vvi~-~r~~~~~~~~~~ei  145 (159)
                      ..+|  |+|.+|.++++.+.+.|   .+|.+. +|++++.+++.++.
T Consensus         2 I~iI--G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    2 IGII--GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             EEEE--STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             EEEE--CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            3455  77999999999999999   899865 99998888777654

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.13  E-value=0.15  Score=42.43  Aligned_cols=43  Identities=21%  Similarity=0.329  Sum_probs=36.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .+++||.++|-|.+.-.|+.++..|.++|+.|.++......++
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~  195 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLS  195 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHH
Confidence            3688999999999999999999999999999998865544443

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.10  E-value=0.16  Score=42.45  Aligned_cols=38  Identities=18%  Similarity=0.286  Sum_probs=35.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEc-CCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWD-IDE  135 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~-r~~  135 (159)
                      +++||.+.|-|.++-.|+.+|..|.++|+.|.++. |+.
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~  193 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR  193 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence            68899999999999999999999999999999995 554

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.08  E-value=0.087  Score=43.28  Aligned_cols=44  Identities=14%  Similarity=0.231  Sum_probs=37.5

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei  145 (159)
                      ++.++|-|+ ||-+++++..|++.|+ +|.+++|+.++.+++++++
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            467888875 9999999999999997 5999999998888887654

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=93.97  E-value=0.16  Score=41.61  Aligned_cols=49  Identities=20%  Similarity=0.291  Sum_probs=37.5

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC---ccHHHHHHHHHHcCCC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE---KGNNETKQMLEEQGYK  151 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~---~~~~~~~~ei~~~g~~  151 (159)
                      .++|||++|-+|.++.+.|.++|.+++..+|+.   ...+++.+.+++..++
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~~~pd   53 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRSDLDLTDPEAVAKLLEAFKPD   53 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTTCS-TTSHHHHHHHHHHH--S
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCchhcCCCCHHHHHHHHHHhCCC
Confidence            589999999999999999999999999887653   3445555666655555

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=93.90  E-value=0.23  Score=45.16  Aligned_cols=50  Identities=12%  Similarity=-0.005  Sum_probs=35.5

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK  151 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~  151 (159)
                      +.++|||++|=||+.+++.|.++|++|.....+-...+++.+.+++.+.+
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~~~l~d~~~v~~~i~~~~pd  430 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEYGKGRLEDRSSLLADIRNVKPT  430 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhCCCeEEeeccccccHHHHHHHHHhhCCC
Confidence            46999999999999999999999999843222223334555555555555

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=93.89  E-value=0.17  Score=41.91  Aligned_cols=49  Identities=16%  Similarity=0.278  Sum_probs=39.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCc---cHHHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEK---GNNETKQMLEE  147 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~---~~~~~~~ei~~  147 (159)
                      +.++|.++|-|+ ||-+++++..++..|+ ++.+++|+++   +.+++++++..
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~  173 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE  173 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh
Confidence            467889999997 6779999999999996 7999999854   67777776644

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.86  E-value=0.21  Score=41.36  Aligned_cols=45  Identities=20%  Similarity=0.276  Sum_probs=38.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .+++||.++|-|.|.-.|+.++..|.++|+.|.++....+.+++.
T Consensus       153 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~  197 (281)
T PRK14183        153 IDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAH  197 (281)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHH
Confidence            378999999999999999999999999999999876555445443

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.81  E-value=0.21  Score=41.49  Aligned_cols=46  Identities=15%  Similarity=0.302  Sum_probs=39.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .+++||.++|.|.|.=+|+.++..|.++|+.|.++......+++..
T Consensus       160 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~  205 (287)
T PRK14176        160 VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYT  205 (287)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHH
Confidence            3689999999999999999999999999999999886655555443

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.75  E-value=0.22  Score=41.36  Aligned_cols=45  Identities=18%  Similarity=0.255  Sum_probs=38.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .++.||+++|-|.+.-+|+.++..|.++|++|.++......+++.
T Consensus       154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~  198 (285)
T PRK14189        154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAH  198 (285)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHH
Confidence            368899999999999999999999999999999887665555443

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=93.75  E-value=0.12  Score=45.14  Aligned_cols=41  Identities=12%  Similarity=0.320  Sum_probs=36.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .+.||+++|.|. |.+|+.+|..+...|++|+++++++.+..
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            367999999997 68999999999999999999999876543

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.72  E-value=0.24  Score=41.14  Aligned_cols=46  Identities=11%  Similarity=0.166  Sum_probs=39.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .++.||.++|-|.|.=+|+.++..|.++|+.|.++......+++..
T Consensus       155 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~  200 (284)
T PRK14177        155 IDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIV  200 (284)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHH
Confidence            3789999999999999999999999999999999886665555443

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=93.72  E-value=0.16  Score=44.22  Aligned_cols=43  Identities=12%  Similarity=0.312  Sum_probs=36.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .+.|++++|.|+ |.||+.++..+...|++|+++++++.+.+..
T Consensus       199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A  241 (413)
T cd00401         199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQA  241 (413)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence            467999999988 5799999999999999999999988765543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=93.72  E-value=0.09  Score=40.08  Aligned_cols=43  Identities=21%  Similarity=0.336  Sum_probs=35.1

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ  148 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~  148 (159)
                      ++.+|+.+-+|+++|..|+++|.+|.+.  +.++.+.+..++..+
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~~   43 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPEE   43 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCHH
Confidence            5789999999999999999999999998  555566666665433

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PLN02503 fatty acyl-CoA reductase 2

Probab=93.71  E-value=0.21  Score=45.58  Aligned_cols=37  Identities=19%  Similarity=0.275  Sum_probs=31.7

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCC---EEEEEcCCC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKV---TLVCWDIDE  135 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga---~Vvi~~r~~  135 (159)
                      +++|.++||||+|=+|+.++++|.+.+.   +|++..|..
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k  156 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAK  156 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            5689999999999999999999998764   578887754

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.65  E-value=0.24  Score=41.12  Aligned_cols=44  Identities=16%  Similarity=0.348  Sum_probs=37.9

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      +++||.++|-|.|.=+|+.++..|.++|+.|.++......+++.
T Consensus       155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~  198 (284)
T PRK14190        155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAEL  198 (284)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHH
Confidence            68999999999999999999999999999999987655444443

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.63  E-value=0.16  Score=41.76  Aligned_cols=42  Identities=14%  Similarity=0.277  Sum_probs=34.0

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      .+-|-|+ +-+|..+|..++..|++|.+.|++++.+++..+.+
T Consensus         7 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i   48 (286)
T PRK07819          7 RVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRI   48 (286)
T ss_pred             EEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH
Confidence            4445555 79999999999999999999999998877655443

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=93.61  E-value=0.12  Score=44.88  Aligned_cols=46  Identities=22%  Similarity=0.317  Sum_probs=39.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQM  144 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~e  144 (159)
                      ++.++.++|.|+ |.+|..+++.|.+.| .+|++++|+.++.++.+++
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~  223 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE  223 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            467899999987 999999999999999 6899999998776666554

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=93.54  E-value=0.14  Score=40.82  Aligned_cols=40  Identities=15%  Similarity=0.230  Sum_probs=34.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .++.++|+|+++++|.++++.+...|++++.+++++++.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~  183 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRD  183 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence            4678999999999999999999999999998887765443

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.53  E-value=0.26  Score=40.93  Aligned_cols=45  Identities=18%  Similarity=0.285  Sum_probs=38.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .+++||+++|-|.|.-+|+.++..|.++|+.|.++......+++.
T Consensus       151 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~  195 (287)
T PRK14173        151 IPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAV  195 (287)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            368899999999999999999999999999999887665555543

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.52  E-value=0.27  Score=40.68  Aligned_cols=46  Identities=20%  Similarity=0.367  Sum_probs=39.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      +++||.++|-|.|.=.|+.++.-|.++|+.|.++......+++..+
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~  200 (278)
T PRK14172        155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCK  200 (278)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHh
Confidence            6899999999999999999999999999999998766555555443

>PRK08655 prephenate dehydrogenase; Provisional

Probab=93.50  E-value=0.14  Score=44.69  Aligned_cols=41  Identities=20%  Similarity=0.328  Sum_probs=34.5

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .+.|.||.|++|..+++.+.+.|.+|.+.+|+++..++.++
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~   42 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK   42 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence            47889999999999999999999999999998766544433

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=93.48  E-value=0.18  Score=41.73  Aligned_cols=44  Identities=27%  Similarity=0.396  Sum_probs=37.6

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCCCccHHHHHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHK--VTLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      .+.|.|+ +++|..+|..++..|  .+++++|+++++.+..+.+++.
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~   47 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLED   47 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHH
Confidence            4677775 899999999999999  4799999999988888887754

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.47  E-value=0.17  Score=41.86  Aligned_cols=41  Identities=15%  Similarity=0.273  Sum_probs=35.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      .+++||.++|.|+++=.|+.++..|.++|++|.++.+..+.
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~  195 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQN  195 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchh
Confidence            36889999999998779999999999999999998885433

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=93.44  E-value=0.13  Score=44.64  Aligned_cols=47  Identities=21%  Similarity=0.356  Sum_probs=39.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei  145 (159)
                      ++.++.++|.|+ |++|..+++.+...|+ +|++++|+.++.++.++++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            367889999987 9999999999999997 7999999987777666553

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.41  E-value=0.29  Score=40.66  Aligned_cols=44  Identities=20%  Similarity=0.333  Sum_probs=36.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      .++.||.+.+-|.|+=.|+.++..|.++|++|.++....+..++
T Consensus       154 i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~  197 (284)
T PRK14179        154 VELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAE  197 (284)
T ss_pred             CCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence            36899999999999999999999999999999998444443443

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=93.35  E-value=0.16  Score=42.07  Aligned_cols=41  Identities=15%  Similarity=0.164  Sum_probs=35.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      .++.++.++|.|. |++|+.++..+.+.|++|.+++|+.++.
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~  188 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL  188 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            3567899999997 6799999999999999999999986543

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=93.29  E-value=0.28  Score=41.49  Aligned_cols=36  Identities=28%  Similarity=0.411  Sum_probs=31.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID  134 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~  134 (159)
                      .+..+.++|.|+ ||+|..+++.|++.|. ++.++|.+
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            466788889888 8999999999999998 89999886

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=93.26  E-value=0.18  Score=40.20  Aligned_cols=39  Identities=18%  Similarity=0.272  Sum_probs=33.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      .|++++|+|+++++|.++.+.....|++|+++.+++++.
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~  177 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKC  177 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            478999999999999999999999999998888766543

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.24  E-value=0.32  Score=40.39  Aligned_cols=46  Identities=17%  Similarity=0.294  Sum_probs=39.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .++.||.++|-|.|.=+|+.++.-|.++|+.|.++......+++..
T Consensus       153 i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~  198 (284)
T PRK14170        153 TQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVA  198 (284)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHH
Confidence            3689999999999999999999999999999998876555555443

>KOG1203|consensus

Probab=93.22  E-value=0.2  Score=43.67  Aligned_cols=46  Identities=20%  Similarity=0.309  Sum_probs=39.9

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      ..+...++|.|++|+.|+-+++.|.++|..|...-|+.++.+....
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~  121 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG  121 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence            4556789999999999999999999999999999998877666644

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=93.14  E-value=0.39  Score=42.62  Aligned_cols=41  Identities=20%  Similarity=0.358  Sum_probs=35.8

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      ..+.||++.|.|.+ .||+.+|+.+...|++|+++++++.+.
T Consensus       250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            46889999999986 599999999999999999998876543

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.14  E-value=0.33  Score=40.52  Aligned_cols=46  Identities=13%  Similarity=0.199  Sum_probs=39.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      +++||.++|-|.|.=+|+.++.-|.++|+.|.++......+++..+
T Consensus       155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~  200 (297)
T PRK14186        155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITR  200 (297)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHh
Confidence            6889999999999999999999999999999988765555554433

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.08  E-value=0.34  Score=40.20  Aligned_cols=44  Identities=18%  Similarity=0.280  Sum_probs=38.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      +++||.++|-|.|.=.|+.++.-|.++|+.|.++......+.+.
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~  198 (282)
T PRK14180        155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSH  198 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHH
Confidence            68899999999999999999999999999999987655555543

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.06  E-value=0.36  Score=40.04  Aligned_cols=45  Identities=22%  Similarity=0.363  Sum_probs=38.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .+++||.++|-|.|.=+|+.++.-|.++|+.|.++......+++.
T Consensus       152 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~  196 (282)
T PRK14169        152 IDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQL  196 (282)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHH
Confidence            368999999999999999999999999999999886555455443

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=93.05  E-value=0.11  Score=41.40  Aligned_cols=31  Identities=23%  Similarity=0.392  Sum_probs=25.4

Q ss_pred             EeCCCCCchHHHHHHHHHCCC--EEEEEcCCCc
Q psy2040         106 LTGAGNGIGRELAKQFVQHKV--TLVCWDIDEK  136 (159)
Q Consensus       106 ITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~  136 (159)
                      +||++|-+|..+.++|.+++.  +|++..|..+
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~   33 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASS   33 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSS
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcc
Confidence            799999999999999999886  8999998764

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=92.91  E-value=0.36  Score=40.34  Aligned_cols=47  Identities=11%  Similarity=0.191  Sum_probs=39.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .++.||.++|-|.|.=+|+.++.-|.++|+.|.++......+++..+
T Consensus       163 i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~~~  209 (299)
T PLN02516        163 IPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESIVR  209 (299)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHh
Confidence            36889999999999999999999999999999998766555555433

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=92.89  E-value=0.14  Score=39.85  Aligned_cols=36  Identities=19%  Similarity=0.325  Sum_probs=25.2

Q ss_pred             CCCCeEEEeC----------------CCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040          99 LEGEIILLTG----------------AGNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        99 l~gk~~lITG----------------~s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      ++||.++||+                +||..|.++|+++..+|++|.++...
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~   52 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGP   52 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-T
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecC
Confidence            3567777776                45679999999999999999887554

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=92.88  E-value=0.17  Score=42.39  Aligned_cols=35  Identities=26%  Similarity=0.350  Sum_probs=27.9

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      |++++|+||++|+|....+-....|+.++++..++
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~  177 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSS  177 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH
Confidence            89999999999999987777777886665554444

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=92.87  E-value=0.37  Score=47.17  Aligned_cols=37  Identities=14%  Similarity=0.219  Sum_probs=32.1

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCC----CEEEEEcCCCcc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHK----VTLVCWDIDEKG  137 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~G----a~Vvi~~r~~~~  137 (159)
                      .++++|||++|.+|..++++|.++|    .+|++..|+...
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~ 1011 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSE 1011 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCCh
Confidence            5789999999999999999999887    788888887543

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.86  E-value=0.38  Score=40.01  Aligned_cols=45  Identities=13%  Similarity=0.319  Sum_probs=38.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      ++.||.++|-|.|.=+|+.++.-|.++|+.|.++......+++..
T Consensus       156 ~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~~  200 (288)
T PRK14171        156 NLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSIT  200 (288)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHH
Confidence            688999999999999999999999999999998876555555433

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.81  E-value=0.38  Score=40.12  Aligned_cols=47  Identities=15%  Similarity=0.232  Sum_probs=39.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .+++||.++|-|.|.=+|+.++.-|.++|+.|.++......+++..+
T Consensus       156 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~  202 (294)
T PRK14187        156 RNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCS  202 (294)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHh
Confidence            36889999999999999999999999999999998776655554433

>PLN02996 fatty acyl-CoA reductase

Probab=92.81  E-value=0.16  Score=44.90  Aligned_cols=37  Identities=22%  Similarity=0.257  Sum_probs=31.4

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCC---EEEEEcCCC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKV---TLVCWDIDE  135 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga---~Vvi~~r~~  135 (159)
                      ++||+++||||+|-+|+.++++|.+.+.   +|++..|..
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~   48 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAS   48 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCC
Confidence            5789999999999999999999987653   577777754

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.79  E-value=0.4  Score=39.74  Aligned_cols=46  Identities=26%  Similarity=0.364  Sum_probs=39.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      ++.||.++|-|.|.=.|+.++.-|.++|+.|.++......+++..+
T Consensus       154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~  199 (282)
T PRK14166        154 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTR  199 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHh
Confidence            6889999999999999999999999999999988776555554433

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=92.73  E-value=1.1  Score=40.19  Aligned_cols=40  Identities=20%  Similarity=0.345  Sum_probs=32.7

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .+++|.|+ +.+|+.++++|.++|.++++.|.|+++.++..
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~  457 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELR  457 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence            35666665 88999999999999999999999987655553

>PRK14968 putative methyltransferase; Provisional

Probab=92.65  E-value=0.52  Score=35.21  Aligned_cols=47  Identities=23%  Similarity=0.276  Sum_probs=35.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG  149 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g  149 (159)
                      +++.++-.|++.|.   ++..++++|.+++.+|++++..+...+.++..+
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~   69 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNN   69 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcC
Confidence            46788888887775   556666668999999999887777766665544

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=92.63  E-value=0.22  Score=41.43  Aligned_cols=46  Identities=22%  Similarity=0.312  Sum_probs=38.3

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~ei  145 (159)
                      +.++.++|.|+ |.+|..+++.+.+.| .+|.+++|++++.++.++++
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~  222 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL  222 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc
Confidence            57889999987 999999999999876 57888999988777766654

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR00518 alaDH alanine dehydrogenase

Probab=92.63  E-value=0.23  Score=42.48  Aligned_cols=43  Identities=19%  Similarity=0.166  Sum_probs=35.6

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      +.++.++|.|+ |++|...++.+.+.|++|.++++++++.+++.
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~  207 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLD  207 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Confidence            45677888877 78999999999999999999999877655543

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.61  E-value=0.45  Score=39.49  Aligned_cols=44  Identities=16%  Similarity=0.231  Sum_probs=38.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      +++||.++|-|.|.=+|+.++.-|.++|+.|.++......+++.
T Consensus       154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~~  197 (282)
T PRK14182        154 DPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGE  197 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            67999999999999999999999999999999987665555544

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=92.56  E-value=0.23  Score=43.00  Aligned_cols=37  Identities=22%  Similarity=0.460  Sum_probs=32.7

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      +.+|.+.|+|.+ |+|.+.|+.|+++|++|.+.|.+..
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~   39 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK   39 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            568899999985 9999999999999999999987654

>PRK13243 glyoxylate reductase; Reviewed

Probab=92.56  E-value=1.2  Score=37.51  Aligned_cols=39  Identities=18%  Similarity=0.307  Sum_probs=34.8

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ..+.||++.|-|. |.||+++|+.+...|++|...+++.+
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            3578999999988 99999999999999999999998754

>KOG1204|consensus

Probab=92.54  E-value=0.056  Score=43.71  Aligned_cols=27  Identities=33%  Similarity=0.492  Sum_probs=21.2

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHK  125 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~G  125 (159)
                      ..+|++++||+|+|||..++..+.+++
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed   30 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAED   30 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcc
Confidence            357899999999999987776665443

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=92.53  E-value=0.67  Score=36.38  Aligned_cols=39  Identities=18%  Similarity=0.308  Sum_probs=33.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      -+++||.++|-|| |.+|..-++.|.+.|++|.+++.+..
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            4578999999987 67888889999999999999987543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=92.43  E-value=0.32  Score=38.32  Aligned_cols=36  Identities=22%  Similarity=0.326  Sum_probs=34.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWD  132 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~  132 (159)
                      .+++||.++|-|.|.=.|+.++..|.++|+.|.+++
T Consensus        58 ~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~   93 (197)
T cd01079          58 NRLYGKTITIINRSEVVGRPLAALLANDGARVYSVD   93 (197)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEe
Confidence            368999999999999999999999999999999995

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PLN02494 adenosylhomocysteinase

Probab=92.42  E-value=0.29  Score=43.41  Aligned_cols=39  Identities=18%  Similarity=0.382  Sum_probs=34.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      .+.||+++|.|.+ .||+.+|+.+...|++|+++++++.+
T Consensus       251 ~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r  289 (477)
T PLN02494        251 MIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPIC  289 (477)
T ss_pred             ccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            3679999999884 99999999999999999999988754

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=92.38  E-value=0.61  Score=42.94  Aligned_cols=39  Identities=15%  Similarity=0.269  Sum_probs=33.4

Q ss_pred             CCCCCCCeEEEeCCC-CCchHHHHHHHHHCCCEEEEEcCC
Q psy2040          96 EKSLEGEIILLTGAG-NGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        96 ~~~l~gk~~lITG~s-~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      .....+|+++|||++ +.||.+++.+|.+.|++|+....+
T Consensus       391 ~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~  430 (866)
T COG4982         391 GGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSR  430 (866)
T ss_pred             CCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEccc
Confidence            345778999999998 579999999999999999986543

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=92.38  E-value=0.29  Score=39.63  Aligned_cols=40  Identities=20%  Similarity=0.252  Sum_probs=33.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .+++++|.|+++++|...++...+.|++|+.+++++++.+
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~  185 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAAD  185 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHH
Confidence            3679999999999999998888889999988887765543

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=92.38  E-value=0.27  Score=38.54  Aligned_cols=38  Identities=11%  Similarity=0.186  Sum_probs=33.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      .+++||.++|.|| |.+|...++.|.+.|++|.+++++.
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            4688999999998 8899999999999999999987653

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.36  E-value=0.39  Score=39.78  Aligned_cols=46  Identities=15%  Similarity=0.252  Sum_probs=39.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .+++||.++|.|.+.-.|+.++..|..+|++|.++.++...+++..
T Consensus       148 i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~  193 (279)
T PRK14178        148 ISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAEL  193 (279)
T ss_pred             CCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHH
Confidence            3689999999999999999999999999999999887765544443

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=92.34  E-value=0.27  Score=39.38  Aligned_cols=42  Identities=21%  Similarity=0.207  Sum_probs=35.7

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|..++|+|+++++|..++......|++|+.+++++++.+.+
T Consensus       132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  173 (305)
T cd08270         132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL  173 (305)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999888876554443

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=92.30  E-value=0.27  Score=40.63  Aligned_cols=39  Identities=23%  Similarity=0.373  Sum_probs=32.6

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .+.|.| .|-+|.++|..++++|.+|.+.+++++..+...
T Consensus         4 ~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~   42 (308)
T PRK06129          4 SVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAP   42 (308)
T ss_pred             EEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHH
Confidence            467777 567999999999999999999999987666543

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=92.29  E-value=0.23  Score=39.58  Aligned_cols=38  Identities=29%  Similarity=0.455  Sum_probs=31.9

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .++|-|+ |-.|..+|+.|.++|.+|++.++++++.++.
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~   39 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEF   39 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHH
Confidence            3455554 8899999999999999999999999887763

>KOG1429|consensus

Probab=92.19  E-value=0.25  Score=41.38  Aligned_cols=37  Identities=22%  Similarity=0.297  Sum_probs=33.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      +..++.++||||+|=||..+|.+|..+|..|+..|.-
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~   60 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNY   60 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecc
Confidence            4567899999999999999999999999999998863

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=92.18  E-value=0.49  Score=40.59  Aligned_cols=47  Identities=17%  Similarity=0.213  Sum_probs=40.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .+++||.++|-|.|.=+|+.++.-|.++|+.|.++......+++..+
T Consensus       227 i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r  273 (364)
T PLN02616        227 VEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITR  273 (364)
T ss_pred             CCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHh
Confidence            36899999999999999999999999999999998766655555443

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.13  E-value=0.27  Score=40.10  Aligned_cols=40  Identities=23%  Similarity=0.318  Sum_probs=33.6

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .+.|-|+ +-+|..+|..+++.|.+|.+.|++++..++..+
T Consensus         3 ~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~   42 (288)
T PRK09260          3 KLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQ   42 (288)
T ss_pred             EEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence            4566666 789999999999999999999999888777654

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=92.12  E-value=0.32  Score=39.28  Aligned_cols=45  Identities=31%  Similarity=0.474  Sum_probs=37.9

Q ss_pred             EEEeCCCCCchHHHHHHHHHCC----CEEEEEcCCCccHHHHHHHHHHc
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHK----VTLVCWDIDEKGNNETKQMLEEQ  148 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~G----a~Vvi~~r~~~~~~~~~~ei~~~  148 (159)
                      +.|.|++|.+|..++..++..|    .++++.|+++++++....+++..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~   49 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDA   49 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHh
Confidence            3578997889999999999999    68999999998888877777543

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=92.05  E-value=0.52  Score=40.16  Aligned_cols=46  Identities=15%  Similarity=0.217  Sum_probs=38.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .+++||.++|-|.|.=+|+.++.-|.++|+.|.++......+++..
T Consensus       210 i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~  255 (345)
T PLN02897        210 VEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQIT  255 (345)
T ss_pred             CCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHH
Confidence            3688999999999999999999999999999998876555555443

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=92.01  E-value=0.49  Score=40.39  Aligned_cols=53  Identities=28%  Similarity=0.266  Sum_probs=40.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC-------------------CccHHHHHHHHHHcCCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID-------------------EKGNNETKQMLEEQGYK  151 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~-------------------~~~~~~~~~ei~~~g~~  151 (159)
                      .+.++.++|-|+ ||+|..+++.|++.|. ++.++|.+                   ..+.+.+++.+++.+..
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~  204 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPD  204 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCC
Confidence            355667777755 8999999999999997 68888887                   44667777778776543

>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]

Probab=91.98  E-value=0.55  Score=38.98  Aligned_cols=46  Identities=20%  Similarity=0.322  Sum_probs=39.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      +++||.++|-|.|.=.|+-++..|...|+.|.++......+.+..+
T Consensus       153 ~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~~~k  198 (283)
T COG0190         153 DLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLASITK  198 (283)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHHHhh
Confidence            7899999999999999999999999999999998776655554443

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=91.97  E-value=0.34  Score=38.60  Aligned_cols=36  Identities=22%  Similarity=0.369  Sum_probs=32.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC---EEEEEcCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV---TLVCWDID  134 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga---~Vvi~~r~  134 (159)
                      +++++.+++-|+ ||.|.++++.+.+.|.   ++++++|+
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            577889999988 9999999999999997   49999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=91.96  E-value=0.33  Score=37.66  Aligned_cols=39  Identities=21%  Similarity=0.312  Sum_probs=33.3

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .++.++|+|+++ +|.++++.....|.+|+.+++++++.+
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~  172 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLE  172 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence            578999999988 999999888889999999988765443

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=91.96  E-value=0.29  Score=34.03  Aligned_cols=37  Identities=30%  Similarity=0.475  Sum_probs=29.1

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..++.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~   37 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEEL   37 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHH
Confidence            356666 5799999999999777999999988764443

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=91.91  E-value=0.15  Score=35.55  Aligned_cols=37  Identities=14%  Similarity=0.293  Sum_probs=31.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      +++||.++|.|| |..|..-++.|.+.|++|.+++.+.
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            578999999998 8899999999999999999988774

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=91.88  E-value=0.36  Score=36.37  Aligned_cols=35  Identities=11%  Similarity=0.193  Sum_probs=31.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWD  132 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~  132 (159)
                      .+++||.++|-|| |.+|...++.|.+.|++|.+++
T Consensus         9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719          9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence            4789999999987 7789999999999999998885

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=91.87  E-value=0.35  Score=38.41  Aligned_cols=38  Identities=21%  Similarity=0.318  Sum_probs=33.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      .++.++|+|+++++|..++..+...|++|+.++++.++
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~  176 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEK  176 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHH
Confidence            47899999999999999999999999999888776544

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=91.83  E-value=0.44  Score=35.11  Aligned_cols=45  Identities=24%  Similarity=0.350  Sum_probs=38.7

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      .+.|.|++|.+|..+|..+...|.  ++++.|++++.++..+.+++.
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~   48 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSH   48 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhh
Confidence            477999999999999999998874  699999998888877777754

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PLN00203 glutamyl-tRNA reductase

Probab=91.80  E-value=0.26  Score=44.17  Aligned_cols=46  Identities=20%  Similarity=0.318  Sum_probs=40.6

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei  145 (159)
                      +.++.++|-|+ |++|..+++.|...|+ +|++++|+.++.+++.+++
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            67899999988 9999999999999997 6999999988888777654

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=91.77  E-value=0.38  Score=38.79  Aligned_cols=40  Identities=23%  Similarity=0.282  Sum_probs=33.9

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .+.+++|+|+++++|...++.....|++|+.+++++++.+
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~  181 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA  181 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            3679999999999999999888899999988887665433

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=91.70  E-value=0.35  Score=39.19  Aligned_cols=40  Identities=13%  Similarity=0.175  Sum_probs=33.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .+++++|.|+++++|.++++...+.|++|+.+++++++.+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~  184 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCR  184 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            4789999999999999999888899999988877664433

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=91.70  E-value=0.36  Score=41.04  Aligned_cols=41  Identities=17%  Similarity=0.267  Sum_probs=33.1

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|+++.|+|.+ |+|....+-....|++|+..++++++.+..
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a  206 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELA  206 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHH
Confidence            48999999998 999865554455899999999998875544

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=91.67  E-value=0.33  Score=40.29  Aligned_cols=39  Identities=23%  Similarity=0.477  Sum_probs=32.9

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .|++++|.|+ +++|...+......|++|+.+++++++.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~  204 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLE  204 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence            4789999999 99999988888888999988888765543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=91.65  E-value=0.42  Score=39.04  Aligned_cols=42  Identities=12%  Similarity=0.123  Sum_probs=33.5

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM  144 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~e  144 (159)
                      +.+.|-|+ |.+|.++|..+++.|.+|.+.|++++..+...++
T Consensus         5 ~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (292)
T PRK07530          5 KKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLAT   46 (292)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Confidence            34555554 8899999999999999999999998877665443

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=91.65  E-value=0.37  Score=38.03  Aligned_cols=37  Identities=27%  Similarity=0.434  Sum_probs=30.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDID  134 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~  134 (159)
                      ..++.+.++|-|+ +|+|..+++.|++.|.. +.++|.+
T Consensus        24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            3466778888885 89999999999999974 8888876

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=91.63  E-value=0.37  Score=39.42  Aligned_cols=42  Identities=17%  Similarity=0.324  Sum_probs=33.5

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM  144 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~e  144 (159)
                      +.+.|-|+ |-+|.++|..+++.|.+|+++|++++..++..+.
T Consensus         4 ~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~   45 (291)
T PRK06035          4 KVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILKNAMEL   45 (291)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence            34555555 7799999999999999999999998877655443

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=91.57  E-value=0.35  Score=40.10  Aligned_cols=39  Identities=18%  Similarity=0.405  Sum_probs=31.7

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~  139 (159)
                      .|++++|+|+ +++|...+.-....|+ +|+++++++++.+
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~  208 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLS  208 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHH
Confidence            5789999986 8999998877777898 5888888876654

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.54  E-value=0.7  Score=38.39  Aligned_cols=46  Identities=15%  Similarity=0.325  Sum_probs=38.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHH--CCCEEEEEcCCCccHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~--~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      ++.||.++|-|.|.-+|+.++..|.+  +|+.|.++......+++..+
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~k  202 (284)
T PRK14193        155 ELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAHTR  202 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHHHH
Confidence            68899999999999999999999998  79999998766555554433

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=91.49  E-value=0.4  Score=39.70  Aligned_cols=39  Identities=15%  Similarity=0.101  Sum_probs=31.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .|++++|.|+ +++|...+......|++|+.+++++++.+
T Consensus       165 ~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~  203 (329)
T TIGR02822       165 PGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARR  203 (329)
T ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHH
Confidence            4789999997 89998877666678999988888876643

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=91.42  E-value=0.78  Score=36.32  Aligned_cols=53  Identities=23%  Similarity=0.281  Sum_probs=38.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC-------------------CccHHHHHHHHHHcCCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID-------------------EKGNNETKQMLEEQGYK  151 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~-------------------~~~~~~~~~ei~~~g~~  151 (159)
                      .+.++.++|-|+ +|+|.++|+.|++.|. ++.++|.+                   ..+.+.+++.+++.++.
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~   90 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPD   90 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCC
Confidence            456778888875 8999999999999997 56666443                   23456677777776653

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PLN02928 oxidoreductase family protein

Probab=91.34  E-value=1.9  Score=36.61  Aligned_cols=38  Identities=29%  Similarity=0.374  Sum_probs=34.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      ..+.||++.|-|. |.||+++|+.+...|++|+..+|+.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            3688999999987 8999999999999999999998863

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=91.24  E-value=0.45  Score=38.86  Aligned_cols=41  Identities=20%  Similarity=0.349  Sum_probs=32.9

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM  144 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~e  144 (159)
                      .+.|-| +|-+|.++|..+++.|.+|.+.|++++.+++..+.
T Consensus         5 kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~   45 (287)
T PRK08293          5 NVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKER   45 (287)
T ss_pred             EEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence            455555 48899999999999999999999998776665543

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=91.18  E-value=0.2  Score=37.57  Aligned_cols=34  Identities=9%  Similarity=0.230  Sum_probs=29.1

Q ss_pred             CCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         110 GNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       110 s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .+-.|..+|+.|.++|++|.+.+|++++.+++.+
T Consensus         9 lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~   42 (163)
T PF03446_consen    9 LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE   42 (163)
T ss_dssp             -SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH
Confidence            3789999999999999999999999877776654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.13  E-value=0.81  Score=38.06  Aligned_cols=46  Identities=22%  Similarity=0.345  Sum_probs=38.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHC----CCEEEEEcCCCccHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQH----KVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~----Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      +++||.++|-|.|.=+|+.++.-|.++    |+.|.++......+++..+
T Consensus       150 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~~~~~  199 (287)
T PRK14181        150 PLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLTEILK  199 (287)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHHHHHh
Confidence            688999999999999999999999998    7999988765555555433

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=91.12  E-value=0.53  Score=37.46  Aligned_cols=41  Identities=15%  Similarity=0.113  Sum_probs=31.8

Q ss_pred             EEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHH
Q psy2040         105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQML  145 (159)
Q Consensus       105 lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei  145 (159)
                      ..-+|++-||.+++++|++.|++|++..|+. ++.+...+++
T Consensus         4 ~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l   45 (211)
T COG2085           4 IAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAAL   45 (211)
T ss_pred             EEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhh
Confidence            4567889999999999999999999986654 4455555544

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=91.08  E-value=0.52  Score=37.69  Aligned_cols=39  Identities=15%  Similarity=0.201  Sum_probs=33.3

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      .|++++|.|+++++|.+..+.....|++|+.+..++++.
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~  180 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERA  180 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            478999999999999999888888999998887766443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.06  E-value=0.69  Score=38.46  Aligned_cols=45  Identities=20%  Similarity=0.197  Sum_probs=38.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHH----CCCEEEEEcCCCccHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQ----HKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~----~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      +++||.++|-|.|.=.|+.++.-|.+    +|++|.++..+...+++..
T Consensus       154 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~  202 (286)
T PRK14184        154 SPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEEC  202 (286)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHHH
Confidence            67899999999999999999999998    8999999877665554443

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=91.05  E-value=0.46  Score=40.00  Aligned_cols=41  Identities=17%  Similarity=0.336  Sum_probs=32.1

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      +.+-|-| +|-+|..+|..++..|++|.+.|++++..++..+
T Consensus         8 ~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~   48 (321)
T PRK07066          8 KTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRA   48 (321)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            3444554 4779999999999999999999999876655444

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=90.98  E-value=0.47  Score=38.52  Aligned_cols=40  Identities=18%  Similarity=0.206  Sum_probs=33.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .|+.++|.|+++++|.++++.....|++|+.+++++++.+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~  178 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE  178 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence            4789999999999999988888888999988877665433

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=90.97  E-value=1  Score=35.92  Aligned_cols=36  Identities=19%  Similarity=0.274  Sum_probs=31.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEE-EEcC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLV-CWDI  133 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vv-i~~r  133 (159)
                      .+++++.+.|-| .+.+|+..++.|.+.|++|+ +.|.
T Consensus        27 ~~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~   63 (227)
T cd01076          27 IGLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS   63 (227)
T ss_pred             CCccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence            457889999887 59999999999999999988 6666

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=90.86  E-value=0.79  Score=38.96  Aligned_cols=54  Identities=17%  Similarity=0.191  Sum_probs=41.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCC-------------------ccHHHHHHHHHHcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDE-------------------KGNNETKQMLEEQGYK  151 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~-------------------~~~~~~~~ei~~~g~~  151 (159)
                      ..++++.++|-|+ +|+|..+++.|+..|. ++.++|.+.                   .+.+.+++.+++.+..
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~   97 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPD   97 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCC
Confidence            3467788888877 8999999999999996 577777653                   3456677777777654

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=90.75  E-value=0.2  Score=39.20  Aligned_cols=37  Identities=24%  Similarity=0.500  Sum_probs=32.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID  134 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~  134 (159)
                      ..+..+.+.|-|+ ||+|..+|+.|++.|. ++.++|.+
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3566778888887 8999999999999998 69998887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=90.69  E-value=0.56  Score=37.07  Aligned_cols=39  Identities=21%  Similarity=0.252  Sum_probs=33.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      .|+.++|.|+++++|.+.++.....|++|+..++++++.
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~  174 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKA  174 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence            478999999999999999988888999998887765543

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>TIGR01968 minD_bact septum site-determining protein MinD

Probab=90.67  E-value=0.5  Score=37.24  Aligned_cols=36  Identities=19%  Similarity=0.362  Sum_probs=30.4

Q ss_pred             CCeEEEeCCCCCchHHH-----HHHHHHCCCEEEEEcCCCc
Q psy2040         101 GEIILLTGAGNGIGREL-----AKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       101 gk~~lITG~s~GIG~~i-----a~~la~~Ga~Vvi~~r~~~  136 (159)
                      +|++.|+++.||.|+.+     |..+++.|.+|.++|.+..
T Consensus         1 ~~ii~v~s~kGGvGKTt~a~~lA~~la~~g~~vlliD~D~~   41 (261)
T TIGR01968         1 ARVIVITSGKGGVGKTTTTANLGTALARLGKKVVLIDADIG   41 (261)
T ss_pred             CeEEEEecCCCCccHHHHHHHHHHHHHHcCCeEEEEECCCC
Confidence            57899999999999954     6778889999999988753

This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.

>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase

Probab=90.66  E-value=1.4  Score=34.08  Aligned_cols=37  Identities=24%  Similarity=0.370  Sum_probs=30.3

Q ss_pred             CCCeEEEeCCCCCchHHH-----HHHHHH-CCCEEEEEcCCCc
Q psy2040         100 EGEIILLTGAGNGIGREL-----AKQFVQ-HKVTLVCWDIDEK  136 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~i-----a~~la~-~Ga~Vvi~~r~~~  136 (159)
                      .+|++.++++.+|.|+..     |..+++ .|.+|.++|-+..
T Consensus        34 ~~~vi~v~s~kgG~GkSt~a~nLA~~la~~~g~~VLlvD~D~~   76 (207)
T TIGR03018        34 NNNLIMVTSSLPGEGKSFTAINLAISLAQEYDKTVLLIDADLR   76 (207)
T ss_pred             CCeEEEEECCCCCCCHHHHHHHHHHHHHHhcCCeEEEEECCCC
Confidence            478999999999999954     567775 5999999887754

Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=90.64  E-value=0.55  Score=41.70  Aligned_cols=36  Identities=19%  Similarity=0.243  Sum_probs=31.1

Q ss_pred             CCCCCCeEEEeCC----------------CCCchHHHHHHHHHCCCEEEEEc
Q psy2040          97 KSLEGEIILLTGA----------------GNGIGRELAKQFVQHKVTLVCWD  132 (159)
Q Consensus        97 ~~l~gk~~lITG~----------------s~GIG~~ia~~la~~Ga~Vvi~~  132 (159)
                      .++.||.++||+|                ||-.|.++|++++.+|++|.++.
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~  303 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLIS  303 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEe
Confidence            3589999999984                55689999999999999998864

>TIGR00936 ahcY adenosylhomocysteinase

Probab=90.60  E-value=0.52  Score=40.99  Aligned_cols=40  Identities=13%  Similarity=0.243  Sum_probs=34.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      .+.||+++|.|. |.+|+.+++.+...|++|+++++++.+.
T Consensus       192 ~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~  231 (406)
T TIGR00936       192 LIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRA  231 (406)
T ss_pred             CCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhH
Confidence            467999999986 7799999999999999999999887553

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=90.59  E-value=0.55  Score=37.84  Aligned_cols=38  Identities=24%  Similarity=0.290  Sum_probs=32.3

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      +..++|.|+++++|.+++......|++|+++++++++.
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~  184 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQA  184 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            46899999999999999888888999998888876543

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=90.54  E-value=0.5  Score=40.61  Aligned_cols=44  Identities=18%  Similarity=0.234  Sum_probs=37.5

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      ...++++|.|+ |.+|+.+++.|.+.|.+|++++++++..++..+
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~  272 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAE  272 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            45688999998 999999999999999999999998876655544

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=90.44  E-value=0.4  Score=41.25  Aligned_cols=40  Identities=23%  Similarity=0.355  Sum_probs=34.0

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .++|.|+ |.+|..+++.|.++|.+|++++++++..++..+
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~   41 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD   41 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh
Confidence            5778887 999999999999999999999998877665543

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=90.38  E-value=0.52  Score=38.02  Aligned_cols=38  Identities=16%  Similarity=0.336  Sum_probs=32.3

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      .|..++|.|+++++|.+.++.....|++++.+..+.++
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~  176 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAG  176 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHH
Confidence            47899999999999999998888899998887665544

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=90.27  E-value=0.62  Score=37.63  Aligned_cols=38  Identities=16%  Similarity=0.275  Sum_probs=32.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      .|..++|.|+++++|.++++.....|++++++.+++++
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~  177 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEK  177 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            46899999999999999999999999998777766544

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=90.24  E-value=2.5  Score=35.23  Aligned_cols=38  Identities=18%  Similarity=0.283  Sum_probs=33.8

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      ..+.||++-|-|- |.||+++|+.+...|++|...++..
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~  178 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSG  178 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCc
Confidence            4688999999987 8999999999999999999998753

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=90.23  E-value=3.3  Score=34.86  Aligned_cols=40  Identities=20%  Similarity=0.341  Sum_probs=34.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      ..+.|+++-|-|. |.||+++|+.+...|++|+..+++++.
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            4678999888876 779999999999999999999987643

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=90.21  E-value=0.58  Score=39.47  Aligned_cols=40  Identities=20%  Similarity=0.229  Sum_probs=33.7

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .|..++|+|+++++|.+.+......|++++++++++++.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~  232 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAE  232 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHH
Confidence            4789999999999999998888889999888877665544

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=90.11  E-value=1.1  Score=36.60  Aligned_cols=37  Identities=14%  Similarity=0.235  Sum_probs=31.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .|+.++|.|+++++|.+.++.....|++++....+.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            4789999999999999998888889999888766553

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=90.10  E-value=1.3  Score=32.13  Aligned_cols=30  Identities=33%  Similarity=0.620  Sum_probs=24.8

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKV-TLVCWDID  134 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~  134 (159)
                      +++-|+ +|+|.++++.|++.|. ++.++|.+
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            566665 8999999999999997 68887754

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=90.10  E-value=2.1  Score=29.03  Aligned_cols=55  Identities=22%  Similarity=0.281  Sum_probs=38.2

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHH--CCCEEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~--~Ga~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D  159 (159)
                      |+.++--|++.|  . .+..+++  .|++|+.+|.+++..+.+.+...+.  +.+ +.+++.|
T Consensus         2 ~~~vLDlGcG~G--~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~-i~~~~~d   60 (112)
T PF12847_consen    2 GGRVLDLGCGTG--R-LSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDR-ITFVQGD   60 (112)
T ss_dssp             TCEEEEETTTTS--H-HHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTT-EEEEESC
T ss_pred             CCEEEEEcCcCC--H-HHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCC-eEEEECc
Confidence            566777777665  2 2334444  8999999999998888887777443  345 7777665

...

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=90.09  E-value=0.59  Score=39.63  Aligned_cols=39  Identities=18%  Similarity=0.164  Sum_probs=32.9

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      .|.+++|.|+++++|...++.....|+++++.++++++.
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~  227 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKA  227 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHH
Confidence            478999999999999999988888999988877665443

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.05  E-value=1.1  Score=37.47  Aligned_cols=46  Identities=17%  Similarity=0.250  Sum_probs=38.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHC----CCEEEEEcCCCccHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQH----KVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~----Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .+++||.++|-|.|.=+|+.++.-|.++    |+.|.++......+++..
T Consensus       157 i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l~~~~  206 (297)
T PRK14168        157 VETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKNLARHC  206 (297)
T ss_pred             CCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcCHHHHH
Confidence            3688999999999999999999999988    799998876555554433

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=90.03  E-value=0.52  Score=38.69  Aligned_cols=39  Identities=13%  Similarity=0.099  Sum_probs=31.9

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~~~~~~  139 (159)
                      .|++++|+|+ +++|...+......|++ |+++++++++.+
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~  202 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLE  202 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            3789999975 89999998888889998 888887765543

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=90.02  E-value=0.65  Score=37.79  Aligned_cols=37  Identities=19%  Similarity=0.293  Sum_probs=30.1

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCCcc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDEKG  137 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~~~  137 (159)
                      |.+++|.|+++++|.+.++..... |++|+.+..++++
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~  186 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPES  186 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHH
Confidence            789999999999999987555555 9999888776544

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>KOG0025|consensus

Probab=90.00  E-value=1.1  Score=37.74  Aligned_cols=51  Identities=20%  Similarity=0.307  Sum_probs=45.4

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK  151 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~  151 (159)
                      |.+++.-|++++.|++..+-....|.+-+-+-|+.+..+++.++++..|..
T Consensus       161 GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~  211 (354)
T KOG0025|consen  161 GDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGAT  211 (354)
T ss_pred             CCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCc
Confidence            669999999999999987777778998888889989999999999988876

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=89.95  E-value=1.1  Score=35.93  Aligned_cols=36  Identities=25%  Similarity=0.400  Sum_probs=29.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID  134 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~  134 (159)
                      .+++..++|-|+ +|+|..+++.|++.|. ++.++|.+
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            355677888876 8999999999999996 67777754

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=89.90  E-value=3.5  Score=37.66  Aligned_cols=40  Identities=13%  Similarity=0.249  Sum_probs=33.5

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .++++|.|+ +.+|+.+++.|.++|.++++.|.|+++.++.
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~  439 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETL  439 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHH
Confidence            356777766 7899999999999999999999998776555

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=89.82  E-value=0.77  Score=37.40  Aligned_cols=41  Identities=24%  Similarity=0.370  Sum_probs=34.9

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      .+..++|.|+++++|..+++.....|++++.+++++++.+.
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~  202 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKI  202 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            46799999999999999999999999999888887655443

>smart00829 PKS_ER Enoylreductase

Probab=89.80  E-value=0.73  Score=35.82  Aligned_cols=40  Identities=15%  Similarity=0.236  Sum_probs=33.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .|.+++|.|+++++|...+......|++|+.+++++++.+
T Consensus       104 ~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  143 (288)
T smart00829      104 PGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRD  143 (288)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            4679999999999999998888888999988887665443

Enoylreductase in Polyketide synthases.

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=89.78  E-value=0.76  Score=37.77  Aligned_cols=41  Identities=20%  Similarity=0.346  Sum_probs=33.0

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM  144 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~e  144 (159)
                      .+-|-|+ |-+|.++|..+++.|++|++++++++..++..+.
T Consensus         6 ~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~   46 (311)
T PRK06130          6 NLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERARGV   46 (311)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence            3444554 7799999999999999999999998877766553

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=89.71  E-value=1.1  Score=36.79  Aligned_cols=37  Identities=19%  Similarity=0.314  Sum_probs=30.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDID  134 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~  134 (159)
                      ..+++..++|-|+ ||+|..+|+.|++.| .++.++|.+
T Consensus        26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4566778888866 799999999999999 578887764

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=89.70  E-value=0.6  Score=37.56  Aligned_cols=38  Identities=21%  Similarity=0.253  Sum_probs=30.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCCCccH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGN  138 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~~~~~  138 (159)
                      .|++++|.|+ +++|...+......|++ |+.+++++++.
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~  158 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR  158 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            5789999976 89999988887788987 77777766554

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.69  E-value=1.2  Score=37.22  Aligned_cols=46  Identities=17%  Similarity=0.242  Sum_probs=38.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHH----CCCEEEEEcCCCccHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQ----HKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~----~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .+++||+++|-|.|.=.|+.++.-|.+    +|++|.++..+...+++..
T Consensus       155 i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~  204 (295)
T PRK14174        155 IETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYT  204 (295)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHH
Confidence            368899999999999999999999987    7899999887765554443

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=89.67  E-value=0.71  Score=37.15  Aligned_cols=38  Identities=13%  Similarity=0.163  Sum_probs=32.9

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      .|.+++|.|+++++|.++++.....|+++++...++++
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~  175 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQ  175 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHH
Confidence            47899999999999999999999999999887776544

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=89.63  E-value=0.88  Score=30.39  Aligned_cols=36  Identities=31%  Similarity=0.518  Sum_probs=31.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQH-KVTLVCWDI  133 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r  133 (159)
                      .++++|.+.+-|+ ++.|+.++..+.+. +.++.+++|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4578899999999 99999999999998 577888877

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB

Probab=89.63  E-value=1.9  Score=33.76  Aligned_cols=56  Identities=23%  Similarity=0.286  Sum_probs=39.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++..++=-|++.|  + =+.-||++|++|..+|.++...+.+.+..++++.+ +....+|
T Consensus        30 ~~g~~LDlgcG~G--R-NalyLA~~G~~VtAvD~s~~al~~l~~~a~~~~l~-i~~~~~D   85 (192)
T PF03848_consen   30 KPGKALDLGCGEG--R-NALYLASQGFDVTAVDISPVALEKLQRLAEEEGLD-IRTRVAD   85 (192)
T ss_dssp             -SSEEEEES-TTS--H-HHHHHHHTT-EEEEEESSHHHHHHHHHHHHHTT-T-EEEEE-B
T ss_pred             CCCcEEEcCCCCc--H-HHHHHHHCCCeEEEEECCHHHHHHHHHHHhhcCce-eEEEEec
Confidence            4557777777655  3 25678999999999999999888887777777777 7666655

When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A.

>CHL00175 minD septum-site determining protein; Validated

Probab=89.60  E-value=0.71  Score=37.35  Aligned_cols=37  Identities=19%  Similarity=0.296  Sum_probs=31.5

Q ss_pred             CCCeEEEeCCCCCchHHH-----HHHHHHCCCEEEEEcCCCc
Q psy2040         100 EGEIILLTGAGNGIGREL-----AKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~i-----a~~la~~Ga~Vvi~~r~~~  136 (159)
                      .+|++.|+++.+|.|+.+     |..|++.|.+|.++|.+..
T Consensus        14 ~~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D~~   55 (281)
T CHL00175         14 MSRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDADIG   55 (281)
T ss_pred             CceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence            368999999999999965     6778889999999888763

>PLN03139 formate dehydrogenase; Provisional

Probab=89.59  E-value=2.7  Score=36.36  Aligned_cols=38  Identities=29%  Similarity=0.375  Sum_probs=33.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      .++.||++-|-|. |.||+.+|+.+...|++|...+++.
T Consensus       195 ~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        195 YDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             cCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCC
Confidence            4689999999985 7799999999999999999988864

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.54  E-value=1.2  Score=37.27  Aligned_cols=45  Identities=16%  Similarity=0.305  Sum_probs=37.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHC----CCEEEEEcCCCccHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQH----KVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~----Ga~Vvi~~r~~~~~~~~~  142 (159)
                      +++||.++|-|.|.=+|+.++.-|.++    ++.|.++......+++..
T Consensus       154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~  202 (297)
T PRK14167        154 DTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLAAKT  202 (297)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHH
Confidence            689999999999999999999999988    899998766555554443

>PRK06932 glycerate dehydrogenase; Provisional

Probab=89.45  E-value=2.7  Score=35.10  Aligned_cols=37  Identities=11%  Similarity=0.209  Sum_probs=33.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      ..+.||++-|-|- |.||+++|+.+...|++|+..++.
T Consensus       143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~  179 (314)
T PRK06932        143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHK  179 (314)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCC
Confidence            4688999999987 899999999999999999988875

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=89.42  E-value=1.1  Score=35.26  Aligned_cols=41  Identities=7%  Similarity=0.063  Sum_probs=32.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .+..+++-|++.|   .=+..||++|++|+.+|.++...+.+.+
T Consensus        34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~   74 (213)
T TIGR03840        34 AGARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFA   74 (213)
T ss_pred             CCCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            4568999999777   2356788999999999999988776543

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=89.33  E-value=0.86  Score=36.81  Aligned_cols=40  Identities=18%  Similarity=0.228  Sum_probs=33.3

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .+++++|.|+++++|...++.....|++|+.++.++++.+
T Consensus       146 ~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~  185 (324)
T cd08288         146 GDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEAD  185 (324)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence            4679999999999999998888889999988776665433

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=89.28  E-value=0.86  Score=37.26  Aligned_cols=38  Identities=16%  Similarity=0.166  Sum_probs=31.1

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .+-|-|+ +-+|.++|..++..|.+|++.|++++..++.
T Consensus         6 ~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~   43 (295)
T PLN02545          6 KVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALSRG   43 (295)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence            4555554 7899999999999999999999998776543

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.27  E-value=1.4  Score=36.87  Aligned_cols=46  Identities=17%  Similarity=0.260  Sum_probs=38.1

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHC----CCEEEEEcCCCccHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQH----KVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~----Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      +++||.++|-|.|.=.|+.++.-|.++    ++.|.++......+++..+
T Consensus       154 ~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~~~~~  203 (293)
T PRK14185        154 ETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLKKECL  203 (293)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHHHHHh
Confidence            688999999999999999999999988    6899988665555555443

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=89.08  E-value=0.84  Score=38.32  Aligned_cols=41  Identities=15%  Similarity=0.218  Sum_probs=31.3

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|.|+ +++|...+......|++|++++.+.++..+.
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~  223 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEA  223 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhH
Confidence            4788999664 8999998888778899988877765544333

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=89.06  E-value=1.2  Score=35.16  Aligned_cols=40  Identities=10%  Similarity=0.073  Sum_probs=32.0

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      +..+++-|++.|   .-+..||++|++|+.+|.++...+.+.+
T Consensus        38 ~~rvL~~gCG~G---~da~~LA~~G~~V~avD~s~~Ai~~~~~   77 (218)
T PRK13255         38 GSRVLVPLCGKS---LDMLWLAEQGHEVLGVELSELAVEQFFA   77 (218)
T ss_pred             CCeEEEeCCCCh---HhHHHHHhCCCeEEEEccCHHHHHHHHH
Confidence            568999998776   3466788999999999999988776543

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=89.05  E-value=4.8  Score=36.60  Aligned_cols=39  Identities=13%  Similarity=0.292  Sum_probs=32.8

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .+++|.|. +.+|+.+++.|.++|.++++.|.|+++.++.
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~  439 (601)
T PRK03659        401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLM  439 (601)
T ss_pred             CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHH
Confidence            46777774 8899999999999999999999998765544

>TIGR01969 minD_arch cell division ATPase MinD, archaeal

Probab=88.95  E-value=0.87  Score=35.67  Aligned_cols=34  Identities=21%  Similarity=0.362  Sum_probs=28.8

Q ss_pred             CeEEEeCCCCCchHH-----HHHHHHHCCCEEEEEcCCC
Q psy2040         102 EIILLTGAGNGIGRE-----LAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       102 k~~lITG~s~GIG~~-----ia~~la~~Ga~Vvi~~r~~  135 (159)
                      |++.+.++.||.|+.     +|..|+++|.+|.++|.+.
T Consensus         1 ~ii~v~~~KGGvGKTt~a~~LA~~la~~g~~VlliD~D~   39 (251)
T TIGR01969         1 RIITIASGKGGTGKTTITANLGVALAKLGKKVLALDADI   39 (251)
T ss_pred             CEEEEEcCCCCCcHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence            478899999999995     4677888999999998775

This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=88.93  E-value=0.84  Score=40.09  Aligned_cols=40  Identities=20%  Similarity=0.219  Sum_probs=33.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      ..+.+|.+.|-| .||.|.++++.|.+.|++|.+.|++...
T Consensus        11 ~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~   50 (473)
T PRK00141         11 PQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETA   50 (473)
T ss_pred             ccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHH
Confidence            345678888888 5889999999999999999999986543

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=88.83  E-value=0.61  Score=36.02  Aligned_cols=33  Identities=21%  Similarity=0.218  Sum_probs=25.2

Q ss_pred             CCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         109 AGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       109 ~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      |.+-+|..+|..||+.|.+|+.+|.++++.+++
T Consensus         7 GlGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l   39 (185)
T PF03721_consen    7 GLGYVGLPLAAALAEKGHQVIGVDIDEEKVEAL   39 (185)
T ss_dssp             --STTHHHHHHHHHHTTSEEEEE-S-HHHHHHH
T ss_pred             CCCcchHHHHHHHHhCCCEEEEEeCChHHHHHH
Confidence            668899999999999999999999987655443

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK07574 formate dehydrogenase; Provisional

Probab=88.72  E-value=3.9  Score=35.32  Aligned_cols=38  Identities=26%  Similarity=0.337  Sum_probs=33.8

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      ..+.||++-|-|. |.||+++|+.+...|++|...+|..
T Consensus       188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~  225 (385)
T PRK07574        188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR  225 (385)
T ss_pred             eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence            4588999999887 7799999999999999999999865

>cd08230 glucose_DH Glucose dehydrogenase

Probab=88.62  E-value=0.83  Score=37.97  Aligned_cols=34  Identities=18%  Similarity=0.093  Sum_probs=29.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      .|+.++|.|+ +++|...+..+...|++|++++++
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            5788999985 999999887777889999998884

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=88.62  E-value=0.98  Score=37.05  Aligned_cols=39  Identities=13%  Similarity=0.238  Sum_probs=32.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .++.++|.| ++++|...+......|++|+.+++++++.+
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~  201 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKAD  201 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHH
Confidence            478999999 799999988888889999998888765543

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=88.62  E-value=1.6  Score=28.40  Aligned_cols=46  Identities=17%  Similarity=0.268  Sum_probs=32.9

Q ss_pred             EEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc--------HHHHHHHHHHcCCC
Q psy2040         105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG--------NNETKQMLEEQGYK  151 (159)
Q Consensus       105 lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~--------~~~~~~ei~~~g~~  151 (159)
                      +|- |++-+|.++|..+++.|.+|.++.+++.-        .+.+.+.+++.|.+
T Consensus         3 vVi-GgG~ig~E~A~~l~~~g~~vtli~~~~~~~~~~~~~~~~~~~~~l~~~gV~   56 (80)
T PF00070_consen    3 VVI-GGGFIGIELAEALAELGKEVTLIERSDRLLPGFDPDAAKILEEYLRKRGVE   56 (80)
T ss_dssp             EEE-SSSHHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEE
T ss_pred             EEE-CcCHHHHHHHHHHHHhCcEEEEEeccchhhhhcCHHHHHHHHHHHHHCCCE
Confidence            444 44789999999999999999998876432        23345556666654

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=88.61  E-value=0.87  Score=38.23  Aligned_cols=39  Identities=23%  Similarity=0.382  Sum_probs=31.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~  139 (159)
                      .|++++|.|+ +++|...+......|+ +|+.+++++++.+
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~  224 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFE  224 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            4789999975 8999998877777898 7888887765543

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=88.60  E-value=1.4  Score=37.81  Aligned_cols=37  Identities=27%  Similarity=0.412  Sum_probs=30.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID  134 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~  134 (159)
                      ..++++.++|.|+ ||+|..+++.|++.|. ++.++|.+
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            3466777888876 8999999999999996 78888775

>PLN02740 Alcohol dehydrogenase-like

Probab=88.52  E-value=0.89  Score=38.36  Aligned_cols=39  Identities=15%  Similarity=0.262  Sum_probs=31.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~  139 (159)
                      .|++++|.|+ +++|...+......|+ +|+.+++++++.+
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~  237 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFE  237 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHH
Confidence            5789999985 8999998888888898 5888888766544

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=88.45  E-value=1.1  Score=36.36  Aligned_cols=43  Identities=26%  Similarity=0.318  Sum_probs=36.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      ++.|+.++=-||++|   .+++.+|+.|++|...|.+++..+....
T Consensus        57 ~l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~   99 (243)
T COG2227          57 DLPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKL   99 (243)
T ss_pred             CCCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHH
Confidence            378999999999998   6889999999999999998876665443

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=88.37  E-value=2.3  Score=32.77  Aligned_cols=48  Identities=15%  Similarity=0.241  Sum_probs=35.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY  150 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~  150 (159)
                      .++.++--|++.|.   .+..++++|++|..+|.+++..+.+.+..++.+.
T Consensus        30 ~~~~vLDiGcG~G~---~a~~La~~g~~V~gvD~S~~~i~~a~~~~~~~~~   77 (197)
T PRK11207         30 KPGKTLDLGCGNGR---NSLYLAANGFDVTAWDKNPMSIANLERIKAAENL   77 (197)
T ss_pred             CCCcEEEECCCCCH---HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence            45678888887764   4567888899999999998777766665555443

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=88.36  E-value=1.1  Score=36.36  Aligned_cols=38  Identities=18%  Similarity=0.304  Sum_probs=32.8

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGN  138 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~  138 (159)
                      |.+++|.|+++++|...+......| ++|+.++.++++.
T Consensus       150 g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~  188 (336)
T cd08252         150 GKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESI  188 (336)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhH
Confidence            7899999999999999998888899 9998887765443

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=88.28  E-value=0.9  Score=40.50  Aligned_cols=41  Identities=15%  Similarity=0.239  Sum_probs=33.5

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      +.+-|-|+ |-.|..+|..+++.|.+|.+.+++++.+++..+
T Consensus         6 ~kV~VIGa-G~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~   46 (503)
T TIGR02279         6 VTVAVIGA-GAMGAGIAQVAASAGHQVLLYDIRAEALARAIA   46 (503)
T ss_pred             cEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            34556665 789999999999999999999999888776544

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=88.24  E-value=0.83  Score=39.05  Aligned_cols=42  Identities=14%  Similarity=0.213  Sum_probs=31.7

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC---EEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV---TLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga---~Vvi~~r~~~~~~~~  141 (159)
                      .|.+++|.|+++++|...+......|+   +|+.+++++++.+.+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a  219 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA  219 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence            478999999999999987765555443   788888877665543

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=88.22  E-value=1.8  Score=34.72  Aligned_cols=36  Identities=25%  Similarity=0.463  Sum_probs=28.9

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID  134 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~  134 (159)
                      .++++.++|-|+ ||+|..+++.|++.|. ++.++|.+
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            456777888876 8999999999999996 57777664

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=88.20  E-value=0.86  Score=37.87  Aligned_cols=41  Identities=17%  Similarity=0.161  Sum_probs=31.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHH-C-CCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQ-H-KVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~-~-Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|.+++|+|+ +++|...+..+.+ . +.+|+++++++++.+.+
T Consensus       163 ~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a  205 (341)
T cd08237         163 DRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLF  205 (341)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHH
Confidence            4789999995 9999987776654 4 46788889887765543

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>PRK06487 glycerate dehydrogenase; Provisional

Probab=88.20  E-value=3.4  Score=34.52  Aligned_cols=37  Identities=19%  Similarity=0.279  Sum_probs=33.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      ..+.||++-|-|- |.||+++|+.+...|++|+..++.
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~  180 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLP  180 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            3588999999987 899999999999999999988875

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=88.10  E-value=1.1  Score=36.68  Aligned_cols=39  Identities=18%  Similarity=0.410  Sum_probs=33.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      .+.+++|.|+++++|.+.++...+.|++|+.+.+++++.
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~  203 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKL  203 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            478999999999999999999999999999888776543

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=88.04  E-value=3.5  Score=35.25  Aligned_cols=36  Identities=17%  Similarity=0.291  Sum_probs=32.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      ..+.+.|-||.|.+|..+|+.|.+.|..|.+.+++.
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            346789999999999999999999999999999864

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=88.01  E-value=0.79  Score=37.36  Aligned_cols=33  Identities=12%  Similarity=0.080  Sum_probs=28.7

Q ss_pred             CCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         109 AGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       109 ~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      |.+-+|..++..+++.|.+|.+.+|++++.+++
T Consensus         6 G~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~   38 (291)
T TIGR01505         6 GLGIMGSPMSINLAKAGYQLHVTTIGPEVADEL   38 (291)
T ss_pred             EecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH
Confidence            568899999999999999999999998766554

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=87.96  E-value=0.57  Score=34.91  Aligned_cols=38  Identities=24%  Similarity=0.388  Sum_probs=30.3

Q ss_pred             EEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       105 lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .|-|+ |..|.++|..++++|.+|.+.+|+++..++..+
T Consensus         3 ~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~   40 (157)
T PF01210_consen    3 AVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINE   40 (157)
T ss_dssp             EEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHH
T ss_pred             EEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence            34444 677999999999999999999999866665544

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=87.96  E-value=1  Score=40.12  Aligned_cols=43  Identities=16%  Similarity=0.285  Sum_probs=34.4

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      +.+-|-|+ |-+|..+|..++..|++|++.|++++.+++..+.+
T Consensus         8 ~~V~VIGa-G~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i   50 (507)
T PRK08268          8 ATVAVIGA-GAMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGI   50 (507)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence            34555565 78999999999999999999999998877754443

>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein

Probab=87.95  E-value=0.93  Score=37.58  Aligned_cols=38  Identities=21%  Similarity=0.302  Sum_probs=31.8

Q ss_pred             CCCCeEEEeCCCCCchHHH-----HHHHHHCCCEEEEEcCCCc
Q psy2040          99 LEGEIILLTGAGNGIGREL-----AKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~i-----a~~la~~Ga~Vvi~~r~~~  136 (159)
                      -.+|++.++|+.||.|+.+     |..++++|.+|.++|-+..
T Consensus        91 ~~~~vIav~~~KGGvGkTT~a~nLA~~la~~g~~VlLvD~D~~  133 (322)
T TIGR03815        91 ARGVVVAVIGGRGGAGASTLAAALALAAARHGLRTLLVDADPW  133 (322)
T ss_pred             CCceEEEEEcCCCCCcHHHHHHHHHHHHHhcCCCEEEEecCCC
Confidence            3589999999999999965     6778889999999887643

Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=87.87  E-value=1.7  Score=37.96  Aligned_cols=51  Identities=18%  Similarity=0.236  Sum_probs=36.3

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc-cHHHHHHHHHHcCC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK-GNNETKQMLEEQGY  150 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~-~~~~~~~ei~~~g~  150 (159)
                      +.+|.+.|.|. ++.|.++|+.|.+.|+.|.+.|+++. ......+++++.|.
T Consensus        12 ~~~~~i~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi   63 (458)
T PRK01710         12 IKNKKVAVVGI-GVSNIPLIKFLVKLGAKVTAFDKKSEEELGEVSNELKELGV   63 (458)
T ss_pred             hcCCeEEEEcc-cHHHHHHHHHHHHCCCEEEEECCCCCccchHHHHHHHhCCC
Confidence            45778888876 56788999999999999999998653 22233344555453

>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases

Probab=87.78  E-value=0.86  Score=34.08  Aligned_cols=34  Identities=24%  Similarity=0.485  Sum_probs=27.0

Q ss_pred             EEEeCCCCCchHH-----HHHHHHHCCCEEEEEcCCCcc
Q psy2040         104 ILLTGAGNGIGRE-----LAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       104 ~lITG~s~GIG~~-----ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      +.|+++.||.|+.     +|..++++|.+|.++|.+.+.
T Consensus         1 I~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D~~~   39 (195)
T PF01656_consen    1 IAVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLDPQA   39 (195)
T ss_dssp             EEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEESTTS
T ss_pred             CEEEcCCCCccHHHHHHHHHhccccccccccccccCccc
Confidence            4688999999994     578888999999999886543

These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....

>TIGR01007 eps_fam capsular exopolysaccharide family

Probab=87.78  E-value=1.2  Score=34.13  Aligned_cols=36  Identities=25%  Similarity=0.342  Sum_probs=30.4

Q ss_pred             CCeEEEeCCCCCchHH-----HHHHHHHCCCEEEEEcCCCc
Q psy2040         101 GEIILLTGAGNGIGRE-----LAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       101 gk~~lITG~s~GIG~~-----ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .|++.||++.+|.|+.     +|..+++.|.+|.++|-+..
T Consensus        17 ~kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~D~~   57 (204)
T TIGR01007        17 IKVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDGDMR   57 (204)
T ss_pred             CcEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence            6899999999999984     46778889999999887654

This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=87.76  E-value=4.4  Score=33.85  Aligned_cols=39  Identities=26%  Similarity=0.402  Sum_probs=33.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ..+.||++.|-|- |.||+++|+.+...|++|...++..+
T Consensus       132 ~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~  170 (312)
T PRK15469        132 YHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRK  170 (312)
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            4678999888865 88999999999999999999887543

>PRK06436 glycerate dehydrogenase; Provisional

Probab=87.76  E-value=4.2  Score=33.90  Aligned_cols=39  Identities=21%  Similarity=0.241  Sum_probs=33.8

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      ...+.||++-|-|- |.||+++|+.+...|++|..++|+.
T Consensus       117 ~~~L~gktvgIiG~-G~IG~~vA~~l~afG~~V~~~~r~~  155 (303)
T PRK06436        117 TKLLYNKSLGILGY-GGIGRRVALLAKAFGMNIYAYTRSY  155 (303)
T ss_pred             CCCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCC
Confidence            34688999999977 8899999999888999999999853

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=87.74  E-value=0.62  Score=33.88  Aligned_cols=33  Identities=15%  Similarity=0.095  Sum_probs=28.2

Q ss_pred             CCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         109 AGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       109 ~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      |.+++|.-+|..|++.|.+|.+++|++ ..++..
T Consensus         5 G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~   37 (151)
T PF02558_consen    5 GAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIK   37 (151)
T ss_dssp             STSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHH
T ss_pred             CcCHHHHHHHHHHHHCCCceEEEEccc-cHHhhh
Confidence            457899999999999999999999988 666643

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	159
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		6e-10
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		3e-05
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		3e-05
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-05
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		3e-04
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		6e-04

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 92  IPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           +P   KS+ GEI+L+TGAG+GIGR  A +F + K  LV WDI++ G  ET    +  G K
Sbjct: 22  MPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK 81
Query: 152 NIHTY 156
            +HT+
Sbjct: 82  -VHTF 85

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 95  SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN-NETKQMLEEQGYKNI 153
           SEK L+G+ +L+TG  +GIGR ++  F +    +    +DE+G+ NETKQ +E++G K +
Sbjct: 42  SEK-LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCV 100

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 95  SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN-NETKQMLEEQGYKNI 153
           SEK L+G+ +L+TG  +GIGR ++  F +    +    +DE+G+ NETKQ +E++G K +
Sbjct: 42  SEK-LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCV 100

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 94  PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137
           P   SLEG++ L+TGAG+G G  +AK+F +    +V  D D+ G
Sbjct: 2   PGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAG 45

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 95  SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           S +SL+ +++++TGAG+GIGR +AK+F  +   +V  ++ E   N+  Q L   G
Sbjct: 1   SYQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG 55

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 93  PPSE--KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID 134
           PP++  K L+G++ ++TGA  GIG  +A+ F +   T+V  D+D
Sbjct: 203 PPADWDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVD 246

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	159
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	1e-23
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	7e-13
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	4e-12
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-11
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	4e-11
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	1e-10
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	3e-10
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	4e-10
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-09
1xkq_A	280	Short-chain reductase family member (5D234); parra	3e-09
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	3e-09
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	3e-09
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	5e-09
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	8e-09
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-08
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	1e-08
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	1e-08
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	2e-08
1spx_A	278	Short-chain reductase family member (5L265); paral	2e-08
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	2e-08
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-08
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-08
1xhl_A	297	Short-chain dehydrogenase/reductase family member	3e-08
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	4e-08
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	4e-08
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	5e-08
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	6e-08
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	7e-08
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	7e-08
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	8e-08
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	8e-08
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	8e-08
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	9e-08
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	9e-08
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	1e-07
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-07
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-07
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	2e-07
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-07
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-07
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	2e-07
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	2e-07
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	3e-07
3cxt_A	291	Dehydrogenase with different specificities; rossma	3e-07
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	3e-07
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	3e-07
3rih_A	293	Short chain dehydrogenase or reductase; structural	4e-07
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	4e-07
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	6e-07
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	6e-07
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	6e-07
1xq1_A	266	Putative tropinone reducatse; structural genomics,	7e-07
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	7e-07
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	8e-07
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	8e-07
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	9e-07
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	9e-07
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-06
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-06
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-06
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-06
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-06
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-06
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	2e-06
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	2e-06
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-06
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	3e-06
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	4e-06
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	4e-06
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	5e-06
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	5e-06
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	7e-06
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	8e-06
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	8e-06
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	8e-06
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	1e-05
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-05
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-05
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	3e-05
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	3e-05
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	3e-05
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	3e-05
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	3e-05
4e4y_A	244	Short chain dehydrogenase family protein; structur	3e-05
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	4e-05
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	4e-05
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	4e-05
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	4e-05
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	4e-05
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	4e-05
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	4e-05
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	5e-05
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	5e-05
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	5e-05
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	6e-05
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	7e-05
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	7e-05
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	8e-05
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	8e-05
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	8e-05
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	9e-05
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-04
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-04
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-04
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	1e-04
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-04
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-04
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-04
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-04
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	2e-04
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	2e-04
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	2e-04
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	2e-04
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-04
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-04
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-04
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	2e-04
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	2e-04
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	3e-04
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	3e-04
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	3e-04
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	3e-04
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	3e-04
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	4e-04
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	5e-04
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	5e-04
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	5e-04
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	6e-04
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	6e-04
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	7e-04

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 92.3 bits (230), Expect = 1e-23
 Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 2/78 (2%)

Query: 81  YSALESILLT-LIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139
            S  E++     +P   KS+ GEI+L+TGAG+GIGR  A +F + K  LV WDI++ G  
Sbjct: 10  SSGRENLYFQGHMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLE 69

Query: 140 ETKQMLEEQGYKNIHTYK 157
           ET    +  G K +HT+ 
Sbjct: 70  ETAAKCKGLGAK-VHTFV 86

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 63.5 bits (155), Expect = 7e-13
 Identities = 15/53 (28%), Positives = 24/53 (45%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
              +G   ++TG  +GIG   A +F +    LV  D+D+    +    L  QG
Sbjct: 27  SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG 79

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 61.7 bits (150), Expect = 4e-12
 Identities = 14/53 (26%), Positives = 23/53 (43%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           K   G    +TG  NG+G  L +Q +     +   DI +   ++    LE +G
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG 56

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 58.7 bits (143), Expect = 2e-11
 Identities = 17/58 (29%), Positives = 31/58 (53%)

Query: 94  PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           P +  L   IIL+TGA +GIGRE A  + ++  T++    +E+   +    + E+  +
Sbjct: 5   PKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR 62

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 58.3 bits (142), Expect = 4e-11
 Identities = 20/57 (35%), Positives = 36/57 (63%)

Query: 95  SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           S +SL+ +++++TGAG+GIGR +AK+F  +   +V  ++ E   N+  Q L   G +
Sbjct: 1   SYQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE 57

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 57.2 bits (139), Expect = 1e-10
 Identities = 13/55 (23%), Positives = 27/55 (49%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           K   G++ L+TGAG  IG   A +  +    +   D++ +   + +  + E+G +
Sbjct: 3   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE 57

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 56.0 bits (136), Expect = 3e-10
 Identities = 14/61 (22%), Positives = 25/61 (40%)

Query: 89  LTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ 148
           +T            ++L+TG G+G+GR  A +       L   D+  +G   +K  + E 
Sbjct: 1   MTATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLET 60

Query: 149 G 149
            
Sbjct: 61  A 61

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 55.6 bits (135), Expect = 4e-10
 Identities = 16/58 (27%), Positives = 26/58 (44%)

Query: 94  PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
              + L+G +IL+TGA  GIG   A+ +  H  ++V     E    E    ++  G  
Sbjct: 7   AHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQP 64

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 54.4 bits (132), Expect = 1e-09
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
            L+  + ++TG    IG        +    ++  D+DE    +  + L  +G+ 
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHD 63

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 53.4 bits (129), Expect = 3e-09
 Identities = 14/55 (25%), Positives = 25/55 (45%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
                + +++TG+ NGIGR  A  F Q    +       +   ET+Q++ + G  
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVS 56

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 53.3 bits (129), Expect = 3e-09
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           LEG+I ++TGA +GIGR  A  F +    +V    +     E    +   G +
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGE 58

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 52.9 bits (128), Expect = 3e-09
 Identities = 13/58 (22%), Positives = 26/58 (44%)

Query: 94  PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           P     E ++ ++TG+G GIG+  A+   +    +V  DI+ +      + +   G  
Sbjct: 2   PGSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT 59

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 52.6 bits (127), Expect = 5e-09
 Identities = 18/55 (32%), Positives = 28/55 (50%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
             L   + L+TGAG+GIGR ++ +      T+   D+D     ET ++L   G K
Sbjct: 3   NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSK 57

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 51.8 bits (125), Expect = 8e-09
 Identities = 16/62 (25%), Positives = 23/62 (37%)

Query: 90  TLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
            L   S  +    + L+TGAG+GIGR  A       VT+           E    +   G
Sbjct: 17  NLYFQSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG 76

Query: 150 YK 151
            +
Sbjct: 77  GQ 78

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 51.3 bits (124), Expect = 1e-08
 Identities = 17/54 (31%), Positives = 30/54 (55%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
            L+G+  ++TGAG GIG+E+A  F     ++V  DI+    N     +++ G +
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 51.5 bits (124), Expect = 1e-08
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
             + G++ L+TGA  GIGR  A+  +     +   D + +   + K  L EQ 
Sbjct: 3   HMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF 55

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 51.4 bits (124), Expect = 1e-08
 Identities = 15/54 (27%), Positives = 26/54 (48%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
            L   + ++TGA  GIGR +A  F +   ++V  D+  +G       + + G K
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK 62

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 51.0 bits (123), Expect = 2e-08
 Identities = 12/54 (22%), Positives = 26/54 (48%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           SL+G++  +TG+  GIG  +A+ + Q    +  W      + + + + +  G  
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVH 84

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 51.0 bits (123), Expect = 2e-08
 Identities = 13/58 (22%), Positives = 24/58 (41%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIH 154
                ++ ++TG+ NGIGR  A  F +    +       +   ET+Q +   G    +
Sbjct: 2   TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQN 59

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 51.0 bits (123), Expect = 2e-08
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 90  TLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEE 147
           +    S   L+ ++ ++TG   GIG   AK FV++  KV  V  DI +    +    +  
Sbjct: 5   STPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKV--VIADIADDHGQKVCNNIGS 62

Query: 148 QG 149
             
Sbjct: 63  PD 64

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 50.6 bits (122), Expect = 2e-08
 Identities = 16/55 (29%), Positives = 27/55 (49%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
             L+G++I+LT A  GIG+  A  F +    ++  DI+E    E ++    Q   
Sbjct: 2   GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRV 56

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 50.6 bits (122), Expect = 2e-08
 Identities = 10/54 (18%), Positives = 30/54 (55%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           +++ +++++TG  +G+G+ +A +F +    +V     ++   E K  +E+   +
Sbjct: 3   AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQ 56

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 50.3 bits (121), Expect = 3e-08
 Identities = 16/55 (29%), Positives = 26/55 (47%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
               G+ +++TG+ NGIGR  A  F +    +     +E    ETKQ + + G  
Sbjct: 22  ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP 76

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 49.9 bits (120), Expect = 4e-08
 Identities = 14/53 (26%), Positives = 22/53 (41%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY 150
            L G   ++TG   GIG  +A+   +   T+   D+D          LE  G+
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGF 61

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 49.8 bits (120), Expect = 4e-08
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 93  PPSEKSLEGEIILLTGA-GNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
                 L+G+++L+T A G GIG   A++ +     +V  D  E+   ET+  L + G  
Sbjct: 14  IDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLG 73

Query: 152 NIHTYK 157
            +    
Sbjct: 74  RVEAVV 79

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 49.5 bits (119), Expect = 5e-08
 Identities = 12/54 (22%), Positives = 21/54 (38%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
            L G+  L+TGA  GIG+++A  + +    +                +   G K
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK 82

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 49.5 bits (119), Expect = 6e-08
 Identities = 14/65 (21%), Positives = 26/65 (40%)

Query: 93  PPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKN 152
           P S   L+G  +++TG   GIGR +A  F +    +          +     L++ G   
Sbjct: 2   PGSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGK 61

Query: 153 IHTYK 157
           +   +
Sbjct: 62  VIGVQ 66

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 49.2 bits (118), Expect = 7e-08
 Identities = 15/60 (25%), Positives = 28/60 (46%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTY 156
           + L+G+ +++TGA  GIGRE+A    +    +V     ++   +      E G  + H  
Sbjct: 24  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 83

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 49.1 bits (118), Expect = 7e-08
 Identities = 9/53 (16%), Positives = 25/53 (47%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           L  ++++++G G  +G  LA++  +    LV      +   +  + + + G +
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR 61

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 49.1 bits (118), Expect = 8e-08
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
              ++ ++TG  +GIG  +    V++   +V   +DEK +   
Sbjct: 12  FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNV 54

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 49.2 bits (118), Expect = 8e-08
 Identities = 12/62 (19%), Positives = 22/62 (35%)

Query: 90  TLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
            L+P        +   +TG  +GIG  +A+      + +     D K  +     L   G
Sbjct: 13  GLVPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG 72

Query: 150 YK 151
           + 
Sbjct: 73  HD 74

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 49.1 bits (118), Expect = 8e-08
 Identities = 14/52 (26%), Positives = 23/52 (44%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           S +    L+TG G+GIG+ +A   V    +++    +        Q LE  G
Sbjct: 8   SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALG 59

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 49.2 bits (117), Expect = 9e-08
 Identities = 13/64 (20%), Positives = 28/64 (43%)

Query: 94  PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNI 153
                 +    ++TG   GIG E+ KQ   + + +V    D    +E  + L+   ++N+
Sbjct: 5   CPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENV 64

Query: 154 HTYK 157
             ++
Sbjct: 65  VFHQ 68

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 48.7 bits (117), Expect = 9e-08
 Identities = 16/54 (29%), Positives = 26/54 (48%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
            L+ + +L+TGA +GIGR   + F +    LV  DI+E    E  + +      
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVV 55

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 48.6 bits (117), Expect = 1e-07
 Identities = 10/51 (19%), Positives = 23/51 (45%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           L+G++ ++TG   GIG  +A +FV+    ++          +  + +    
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD 54

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 16/55 (29%), Positives = 30/55 (54%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
            + + E+ L+TGA +GIG E+A++  +  + +      E+G   T + L E G +
Sbjct: 18  ATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE 72

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 13/60 (21%), Positives = 26/60 (43%)

Query: 90  TLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           +++   + S EG I L+TG G G+GR +A+       ++V         +     +  + 
Sbjct: 22  SMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT 81

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 17/55 (30%), Positives = 29/55 (52%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
              E ++ L+TGAG GIGRE+AK   +    ++C    +K  +     ++  GY+
Sbjct: 40  YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE 94

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 13/55 (23%), Positives = 27/55 (49%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           K+L+ ++ ++TGA  GIGR +A +  +    ++     E G        ++ G +
Sbjct: 24  KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLE 78

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
           L   + ++TG G+GIGR  A+ F ++   +V  D++E      
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRV 67

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 18/44 (40%), Positives = 27/44 (61%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
           SLEG++ L+TGAG+G G  +AK+F +    +V  D D+ G    
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERV 49

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 13/39 (33%), Positives = 24/39 (61%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137
           L  +++++TGA  GIGR +A++FV     ++   I + G
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG 44

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 47.5 bits (114), Expect = 3e-07
 Identities = 14/54 (25%), Positives = 25/54 (46%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           SL+G   L+TG   GIG  + ++       +     +EK  +E  ++  E+G  
Sbjct: 18  SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN 71

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 47.5 bits (114), Expect = 3e-07
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           LE ++ ++TGA  GIG E ++   +    +V  D+ E    +        G
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPET---DLAGAAASVG 56

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 14/43 (32%), Positives = 24/43 (55%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
           L G++ ++TGAG GIG  +A++       ++C DID    +  
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAA 69

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 47.2 bits (113), Expect = 4e-07
 Identities = 14/61 (22%), Positives = 23/61 (37%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTY 156
             L    +L+TG   GIGR +A  F +    +       +  +     L E G  N+   
Sbjct: 37  FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGV 96

Query: 157 K 157
           +
Sbjct: 97  R 97

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 46.7 bits (112), Expect = 4e-07
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           + L+ ++ ++TG  NGIGR +A++F      +   D+      E +  +   G +
Sbjct: 3   QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRR 55

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 46.3 bits (111), Expect = 6e-07
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137
             G+ +L+TG   GIGR +A+ F +    +   D+  +G
Sbjct: 4   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG 42

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 46.3 bits (111), Expect = 6e-07
 Identities = 16/54 (29%), Positives = 28/54 (51%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           SL  ++ L+TGA  GIG E+A        T+V     +    + +  ++E+G+K
Sbjct: 2   SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFK 55

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 46.4 bits (111), Expect = 6e-07
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE 147
             G+++++TG G GIG  + + FV     +V  D DE G    +Q L  
Sbjct: 7   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG 55

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 46.3 bits (111), Expect = 7e-07
 Identities = 13/54 (24%), Positives = 27/54 (50%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           SL+ + +L+TG   GIG  + ++F      +     +E   NE     +++G++
Sbjct: 11  SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ 64

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 46.4 bits (111), Expect = 7e-07
 Identities = 13/53 (24%), Positives = 25/53 (47%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
            SL G++ ++TGA  GIG  +A++       +V    D +     ++ +   G
Sbjct: 25  SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG 77

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 46.3 bits (111), Expect = 8e-07
 Identities = 14/55 (25%), Positives = 28/55 (50%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           K LE ++ L+T + +GIG  +A++  Q    +V     ++  + T   L+ +G  
Sbjct: 10  KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLS 64

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 45.9 bits (110), Expect = 8e-07
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET-KQMLEEQGYK 151
             + ++TGA +G G  +A +F+     +   D+  +   ET +        K
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADK 53

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 46.0 bits (110), Expect = 9e-07
 Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 1/55 (1%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYK 151
           S   + I++TG   GIG    +        +             T+++ +E G K
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK 65

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 46.0 bits (110), Expect = 9e-07
 Identities = 8/52 (15%), Positives = 20/52 (38%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
            L   + ++TG  +GIG    +  ++    +     D +     +  L ++ 
Sbjct: 5   DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF 56

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 46.0 bits (110), Expect = 1e-06
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
           L G+ +++TG   G+G E A+Q V     +V  D+ ++    T
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAAT 45

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 46.0 bits (110), Expect = 1e-06
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
           L G++ L++G   G+G    +  V     +V  DI ++     
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM 47

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           L GE+ L+TG  +G+GR L  +FV     +   D   +     +++    G
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAE---RLRELEVAHG 50

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 12/52 (23%), Positives = 22/52 (42%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           +     + + GAG+ IG E+AK+F     T+     + +        +E  G
Sbjct: 4   TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG 55

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 45.2 bits (108), Expect = 2e-06
 Identities = 13/54 (24%), Positives = 25/54 (46%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           +LEG   L+TG   GIG  + ++      ++     ++K  N+       +G+K
Sbjct: 6   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK 59

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE 140
           S   + IL+ G    +G E+ K F       +  D  E  N +
Sbjct: 19  SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD 61

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 14/54 (25%), Positives = 23/54 (42%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
            L G+  L+TG+  G+G   A+        ++  DI      E+   L  +GY 
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYD 59

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 19/53 (35%), Positives = 27/53 (50%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
             L G+ IL+TGA +GIGR     F +   +LV  D +E+   E    LE + 
Sbjct: 2   GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEA 54

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           L+TGAG GIG+ +A + V+    +   D ++         + + G  
Sbjct: 6   LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH 52

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 44.4 bits (106), Expect = 3e-06
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNET 141
           L+G++ L+TG  +G+G E+ K  +    KV     DI+E    + 
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKV--AFSDINEAAGQQL 46

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 44.0 bits (105), Expect = 4e-06
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           + L G+  L+TGA  GIG+ +A +      T++  DI+ +G    K      G K
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEG---AKAAAASIGKK 53

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 8/60 (13%), Positives = 21/60 (35%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYK 157
            L  + ++   A  GIG + +++ V+  +         +      ++       NI  + 
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 44.0 bits (105), Expect = 5e-06
 Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 3/57 (5%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYK 151
           K LEG+++++TG+  G+G+ +A +F     KV +V +   E   N   + +++ G +
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKV-VVNYRSKEDEANSVLEEIKKVGGE 58

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 43.7 bits (104), Expect = 5e-06
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYK 151
             L+G+ +L+TG+  GIG   A+ F +    +           +ET   +   G  
Sbjct: 3   PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGD 58

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 43.4 bits (103), Expect = 7e-06
 Identities = 10/55 (18%), Positives = 23/55 (41%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKN 152
            L+G++ ++TG   GIG+ + K+ ++    +V      +        L+      
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPT 69

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 43.3 bits (103), Expect = 8e-06
 Identities = 6/55 (10%), Positives = 20/55 (36%), Gaps = 1/55 (1%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYK 151
                  L+T    G+G+++ ++ +    ++      D       K+  ++   +
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEER 58

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 43.3 bits (103), Expect = 8e-06
 Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           +L+G+  L+TG+ +GIG  +A+   +    +V     +         +   G K
Sbjct: 1   TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVK 52

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 43.4 bits (103), Expect = 8e-06
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYK 151
           L  ++  +TG G+GIG  +A+ F++H    V       +     +++    G +
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRR 78

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 42.9 bits (102), Expect = 1e-05
 Identities = 11/39 (28%), Positives = 16/39 (41%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137
            EG++ L+TGA  GIG  +          +   D    G
Sbjct: 26  FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAG 64

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 42.9 bits (102), Expect = 1e-05
 Identities = 17/45 (37%), Positives = 26/45 (57%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
           K LEG+  L+TG+  GIGR  A+ +V+   T+   DID +   + 
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQA 48

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 41.7 bits (99), Expect = 3e-05
 Identities = 12/53 (22%), Positives = 24/53 (45%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
             L G+  L+TGA +GIG  +A+   +    ++    +E+        L++  
Sbjct: 10  IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNY 62

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 41.7 bits (99), Expect = 3e-05
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)

Query: 96  EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYK 151
           E  L+G++ L+TG+  GIGR +A++      T++      E+     +++  + G K
Sbjct: 2   EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVK 58

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 11/44 (25%), Positives = 18/44 (40%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET 141
               +I ++TGAG+G+GR +A         +           ET
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQET 68

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 41.7 bits (99), Expect = 3e-05
 Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYK 151
            L+G+  ++TG+  G+G+ +A +       +V          + T +  +  G  
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGIN 56

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%)

Query: 96  EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           +K L+G++ ++TGA  GIG  +A+ F +   T+V  D+D     + K++ ++ G
Sbjct: 208 DKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKVG 260

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNET 141
           S      L+TG   GIG+ + +  +Q+     ++  DI +  + E 
Sbjct: 1   SNAMANYLVTGGSKGIGKAVVELLLQNKNHT-VINIDIQQSFSAEN 45

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           +S+  +  ++TG+ +GIG  +A+   +    + L  +   ++    T ++       
Sbjct: 21  QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGT 77

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 41.4 bits (98), Expect = 4e-05
 Identities = 15/52 (28%), Positives = 24/52 (46%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           SL G I L+TG   GIG+ +A+  ++    +     D +   +T   L   G
Sbjct: 26  SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG 77

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 41.4 bits (98), Expect = 4e-05
 Identities = 8/52 (15%), Positives = 18/52 (34%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
             +  + ++TGA  GIG  +A         +V     ++   +    +    
Sbjct: 4   EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSN 55

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 41.0 bits (97), Expect = 4e-05
 Identities = 16/58 (27%), Positives = 22/58 (37%)

Query: 93  PPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY 150
           P S   L G   L+TGA  GIG  +A+ F      +      E    E    L +  +
Sbjct: 19  PGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVF 76

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 41.0 bits (97), Expect = 4e-05
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           SL G   ++TGAG+GIGR +A  + +    ++ W   +    E    + + G  
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGS 80

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 40.9 bits (97), Expect = 4e-05
 Identities = 12/50 (24%), Positives = 19/50 (38%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE 147
            L G  +L+TGAG GIGR   +        +V     +   +   +    
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG 53

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 41.1 bits (97), Expect = 4e-05
 Identities = 13/52 (25%), Positives = 22/52 (42%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
            + G++ ++TGA  GIGR +A Q  +   T+              Q  +  G
Sbjct: 2   PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG 53

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 41.0 bits (97), Expect = 5e-05
 Identities = 11/60 (18%), Positives = 22/60 (36%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYK 157
           S +G++  +TG G G+G+ +           V           T + +  Q    +H  +
Sbjct: 23  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 82

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 40.9 bits (97), Expect = 5e-05
 Identities = 15/52 (28%), Positives = 26/52 (50%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           +LEG++ L+TGA  GIG+ +A+   +    ++     E G       L + G
Sbjct: 6   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG 57

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 40.8 bits (96), Expect = 5e-05
 Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 7/58 (12%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQ-----HKVTLVCWDIDEKGNNETKQMLEEQG 149
             L   + +LTGA  G GR LA Q  +       + +      E    + K+ L  Q 
Sbjct: 2   DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVS--ARSESMLRQLKEELGAQQ 57

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 41.0 bits (97), Expect = 6e-05
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 94  PSEKSLEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYK 151
            S + L+    L+TG  +GIGR  A  + +    V +     +E+   + K ++EE G K
Sbjct: 43  GSGR-LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRK 101

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 40.8 bits (96), Expect = 7e-05
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135
           II+++G   GIG    K        +V  DI +
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIRD 35

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 40.6 bits (96), Expect = 7e-05
 Identities = 17/52 (32%), Positives = 26/52 (50%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
            L+G+  L+TGA  GIG ++A+ F      LV    D    +  ++ L EQ 
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF 68

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 40.3 bits (95), Expect = 8e-05
 Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           L+G++ ++TG+ +GIG  +A         + L  +    +       +  + G K
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK 56

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 40.4 bits (95), Expect = 8e-05
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 93  PPSEKSLEGEIILLTGAGNGIGRELAKQF 121
           P S   ++G ++++TGAG GIGR  A  F
Sbjct: 19  PGSMGVVDGRVVIVTGAGGGIGRAHALAF 47

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 40.2 bits (95), Expect = 8e-05
 Identities = 12/49 (24%), Positives = 22/49 (44%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML 145
           + L  +I ++TGA +GIG   AK+FV     +      +   +     +
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI 73

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 40.2 bits (95), Expect = 9e-05
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137
              + +++++TGA  GIG  L + +      +V      K 
Sbjct: 24  MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP 64

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 12/63 (19%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN------------ETKQMLE 146
           L G++  +TGA  G GR  A +       ++  D+ ++  +             T +++E
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70

Query: 147 EQG 149
           + G
Sbjct: 71  DIG 73

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 101 GEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYK 151
            ++ ++TG   GIGR ++++       + +      E+   ET +++E    K
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQK 54

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 12/63 (19%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN------------ETKQMLE 146
           +EG++  +TGA  G GR  A    +    ++  D+ ++ +             ET + +E
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85

Query: 147 EQG 149
             G
Sbjct: 86  ALG 88

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 1/58 (1%)

Query: 95  SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGNNETKQMLEEQGYK 151
           +   L   I L+TGA  GIGR +A +         V +       +E    +   G +
Sbjct: 22  TALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGE 79

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 8/27 (29%), Positives = 18/27 (66%)

Query: 95  SEKSLEGEIILLTGAGNGIGRELAKQF 121
           S    + +++++TGAG G+G+  + +F
Sbjct: 2   SPVDFKDKVVIITGAGGGLGKYYSLEF 28

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137
              G+ + +TGAG GIG   A  FV+    +  +D     
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ 43

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 16/67 (23%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN----------------NETK 142
           +EG++  +TGA  G GR  A +  Q    ++  DI +                    ET 
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68

Query: 143 QMLEEQG 149
            +++   
Sbjct: 69  DLVKGHN 75

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 12/63 (19%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN------------ETKQMLE 146
           ++ +++L+TG   G GR  A +  +    ++ +DI                  E    +E
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67

Query: 147 EQG 149
           + G
Sbjct: 68  KTG 70

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 13/67 (19%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-------------DEKGNNETKQM 144
           SL+G +  +TGA  G GR  A +       ++  DI               +  +ET ++
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71

Query: 145 LEEQGYK 151
           +E+QG K
Sbjct: 72  VEDQGRK 78

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 12/50 (24%), Positives = 17/50 (34%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE 147
           +  G   L+TGAG GIGR+  K        +V             +    
Sbjct: 4   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG 53

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 94  PSEKSLEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQG 149
           P    +E    ++TGA   IGR +A +  Q   +V ++ +    +        L ++ 
Sbjct: 16  PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRV-VIHYHNSAEAAVSLADELNKER 72

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYK 151
           L+G++ L+TGA  GIGR +A    +    +V     +E+  NE    +++ G  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSD 55

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 1/56 (1%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYK 151
                 + ++TG   GIG  +A+        +    I D +G       L   G +
Sbjct: 25  TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGAR 80

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 98  SLEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDID--EKGNNETKQMLEEQGYK 151
           SL+G+++++TGA    G+G E A+   +    +        +      K++ +  G K
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIK 74

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGNNETKQMLEEQGYK 151
              +  L+TGA  GIGR +A Q  +      V +   ++      + ++ +G  
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVD 55

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 95  SEKSLEGEIILLTGAGNGIGRELAKQF 121
           S    +G ++L+TGAG G+GR  A  F
Sbjct: 3   SPLRFDGRVVLVTGAGGGLGRAYALAF 29

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYK 151
            L G + L+TG   G+G  +A+   +   ++V    + E+ +   +++ E+ G +
Sbjct: 18  DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE 72

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 94  PSEKSLEGEIILLTGAGNGIGRELAKQFVQH 124
             +   +G + ++TGAG G+GRE A  F + 
Sbjct: 12  DGKLRYDGRVAVVTGAGAGLGREYALLFAER 42

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 39.0 bits (92), Expect = 3e-04
 Identities = 8/56 (14%), Positives = 21/56 (37%), Gaps = 3/56 (5%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYK 151
            +   I  +TG   GIG  + ++  +   +V +     +     +  +  +  G+ 
Sbjct: 10  VMSQRIAYVTGGMGGIGTSICQRLHKDGFRV-VAGCGPNSPRRVKWLEDQKALGFD 64

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 15/52 (28%), Positives = 23/52 (44%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
            L+G    +TGAG+GIG E+ + F      L+  D +    +   Q L    
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAV 59

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 8/38 (21%), Positives = 14/38 (36%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135
           S E   +L+ G    +G    + F      +   D+ E
Sbjct: 4   SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVE 41

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 13/64 (20%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN-------------ETKQML 145
           LEG +  +TGA  G GR  A +       ++  DI  K  +             ET +++
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68

Query: 146 EEQG 149
           E   
Sbjct: 69  EAAN 72

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 2/33 (6%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQ--HKVTLV 129
           +    I++TGAG+G+GR L    V+  H+V+++
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMM 33

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 38.0 bits (89), Expect = 5e-04
 Identities = 7/37 (18%), Positives = 16/37 (43%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135
            EG   +++G   G+G    ++     + +V  D+  
Sbjct: 28  FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAA 64

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 12/55 (21%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYK 151
            + +  L+TG+  G+G+  A +  ++   + ++ +   +K   ET + +E+ G K
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNI-VINYARSKKAALETAEEIEKLGVK 55

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 38.0 bits (89), Expect = 5e-04
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML 145
           L+  + ++TGA +G+G  + +   Q   T++  D+      E    L
Sbjct: 5   LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL 51

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 38.0 bits (89), Expect = 6e-04
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML 145
           S++G + ++TG  +G+G   A++ V    + V  D+   G     + L
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL 56

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 38.0 bits (89), Expect = 6e-04
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 13/73 (17%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN------------ETKQM 144
             L+G++  +TGA  G GR  A +  Q    +V  D+  +  N            ET ++
Sbjct: 42  NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRL 101

Query: 145 LEEQGYKNIHTYK 157
           +EEQG + I   +
Sbjct: 102 VEEQGRR-IIARQ 113

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 37.6 bits (88), Expect = 7e-04
 Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 4/35 (11%)

Query: 103 IILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDE 135
           +I +TG+ +GIG  L +   +  H V  +  D  +
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTV--IGIDRGQ 35

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	159
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.43
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.42
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.34
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.31
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.27
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.24
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.24
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.23
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.23
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.23
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.2
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.2
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.2
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.2
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.19
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.19
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.19
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.19
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.18
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.18
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.17
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.17
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.17
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.17
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.17
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.16
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.15
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.15
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.15
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.15
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.14
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.14
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.14
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.14
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.14
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.13
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.13
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.13
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.13
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.12
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.12
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.12
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.12
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.12
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.12
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.12
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.11
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.11
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.11
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.11
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.11
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.11
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.11
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.11
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.11
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.11
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.11
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.1
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.1
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.09
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.09
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.09
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.09
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.09
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.09
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.08
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.08
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.08
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.08
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.08
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.07
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.07
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.07
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.07
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.07
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.07
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.06
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.06
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.06
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.06
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.06
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.06
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.05
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.05
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.05
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.05
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.05
1spx_A	278	Short-chain reductase family member (5L265); paral	99.05
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.05
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.04
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.04
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.04
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.04
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.04
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.03
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.03
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.03
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.03
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.03
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.03
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.03
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.02
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.02
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.02
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.02
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.02
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.01
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.01
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.01
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.01
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.01
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	98.99
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	98.99
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	98.99
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	98.99
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	98.98
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	98.98
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	98.98
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	98.98
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	98.98
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	98.98
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.97
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	98.97
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	98.97
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	98.97
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	98.97
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	98.95
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	98.95
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	98.94
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	98.94
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	98.94
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	98.94
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	98.94
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	98.94
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	98.93
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	98.93
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	98.93
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	98.93
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	98.92
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	98.92
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	98.9
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	98.9
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	98.9
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	98.9
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.89
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	98.89
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	98.88
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	98.88
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	98.87
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	98.87
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	98.87
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.85
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	98.85
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	98.85
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	98.84
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	98.84
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	98.84
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	98.83
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	98.82
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	98.82
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	98.82
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	98.82
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	98.8
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	98.8
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	98.8
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	98.79
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	98.79
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.78
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	98.78
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	98.77
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	98.77
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	98.76
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.74
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.74
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	98.73
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	98.72
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	98.72
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	98.72
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	98.72
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	98.72
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	98.69
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	98.69
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	98.69
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	98.68
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	98.68
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	98.68
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	98.66
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	98.65
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	98.64
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	98.61
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.58
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	98.56
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	98.56
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	98.56
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	98.55
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	98.53
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	98.53
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	98.52
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	98.51
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.5
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	98.48
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.46
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	98.46
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.45
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.45
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	98.44
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	98.44
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	98.42
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	98.41
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	98.4
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	98.39
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.38
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.38
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	98.38
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	98.37
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	98.36
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	98.32
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	98.32
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	98.31
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	98.29
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	98.27
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	98.27
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	98.24
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	98.23
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	98.21
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	98.2
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	98.19
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	98.19
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	98.18
1xq6_A	253	Unknown protein; structural genomics, protein stru	98.18
4f6c_A	427	AUSA reductase domain protein; thioester reductase	98.16
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	98.16
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	98.13
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	98.12
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	98.11
4e4y_A	244	Short chain dehydrogenase family protein; structur	98.11
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.11
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	98.09
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	98.08
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	98.08
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	98.07
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	98.07
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	98.06
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	98.05
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	98.03
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	98.0
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.99
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	97.99
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	97.99
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	97.97
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	97.97
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	97.96
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	97.96
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	97.96
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	97.95
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	97.94
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	97.94
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	97.94
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.92
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	97.91
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	97.91
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.88
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	97.88
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	97.87
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	97.87
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.86
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	97.86
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.85
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	97.84
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	97.83
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	97.83
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	97.79
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	97.76
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	97.72
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	97.71
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.71
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.7
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.69
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	97.69
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.68
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	97.68
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	97.68
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	97.68
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	97.67
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.67
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	97.67
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.67
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	97.66
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	97.64
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	97.6
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	97.6
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	97.58
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	97.57
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	97.56
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	97.52
4f6l_B	508	AUSA reductase domain protein; thioester reductase	97.5
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.5
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.49
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.47
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	97.45
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	97.43
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.43
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	97.42
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	97.42
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	97.4
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.38
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	97.38
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	97.36
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	97.35
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.35
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.34
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	97.34
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.34
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	97.32
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.3
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.28
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.25
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.23
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.2
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	97.19
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.18
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.18
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	97.17
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	97.16
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	97.12
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	97.12
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.12
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.1
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.08
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	97.06
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	97.05
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.04
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.03
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	97.0
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.97
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	96.9
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	96.88
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	96.87
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	96.87
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.86
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	96.85
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	96.81
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.8
3gms_A	340	Putative NADPH:quinone reductase; structural genom	96.76
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.74
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.72
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.7
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	96.68
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.63
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.61
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.6
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.49
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	96.41
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.4
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	96.38
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.38
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	96.34
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.34
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	96.32
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.29
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.27
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.15
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	96.14
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.13
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.1
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.03
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.01
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.01
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.91
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	95.9
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	95.87
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	95.81
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	95.79
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	95.68
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.66
3c85_A	183	Putative glutathione-regulated potassium-efflux S	95.64
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	95.61
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	95.58
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.57
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.55
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	95.44
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	95.43
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.36
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.25
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.23
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.21
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	95.18
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	95.14
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.11
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.04
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	95.04
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.0
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	94.99
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	94.97
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	94.9
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	94.9
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	94.87
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	94.81
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	94.74
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	94.69
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	94.68
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	94.65
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	94.63
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	94.63
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	94.63
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	94.4
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	94.37
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	94.32
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	94.31
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	94.24
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	94.13
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	94.13
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	94.12
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	94.11
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	94.02
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	94.0
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	93.98
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	93.92
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	93.87
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	93.85
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	93.85
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	93.78
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	93.76
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	93.67
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	93.65
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	93.57
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	93.57
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	93.56
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	93.55
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	93.53
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	93.5
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	93.47
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	93.45
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	93.37
4b4u_A	303	Bifunctional protein fold; oxidoreductase; HET: NA	93.26
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	93.25
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	93.23
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	93.22
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	93.14
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	93.12
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	93.06
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	93.02
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	93.0
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	93.0
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	92.98
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	92.96
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	92.95
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	92.93
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	92.93
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	92.86
4g65_A	461	TRK system potassium uptake protein TRKA; structur	92.84
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	92.82
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	92.8
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	92.73
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	92.69
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	92.68
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	92.64
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	92.58
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	92.55
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	92.55
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	92.52
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	92.5
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	92.5
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	92.48
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	92.4
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	92.39
3tl2_A	315	Malate dehydrogenase; center for structural genomi	92.39
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	92.33
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	92.33
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	92.3
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	92.25
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	92.19
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	92.15
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	92.15
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	92.15
3qha_A	296	Putative oxidoreductase; seattle structural genomi	92.14
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	92.12
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	92.08
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	91.98
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	91.94
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	91.91
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	91.88
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	91.8
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	91.76
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	91.69
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	91.65
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	91.59
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	91.57
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	91.57
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	91.56
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	91.53
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	91.52
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	91.46
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	91.41
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	91.4

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.43  E-value=2e-13  Score=109.49  Aligned_cols=62  Identities=32%  Similarity=0.521  Sum_probs=59.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++||+++||||++|||+++|++|+++|++|++++|++++++++++++++.|.+ +.++++|
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~-~~~~~~D   64 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE-VLGVKAD   64 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence            4689999999999999999999999999999999999999999999999999998 9999998

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.42  E-value=1.7e-13  Score=109.92  Aligned_cols=63  Identities=24%  Similarity=0.328  Sum_probs=60.1

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++++||+++||||++|||+++|++|+++|++|++++|++++++++++++++.|.+ +..+++|
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~-~~~~~~D   66 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYD-AHGVAFD   66 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCC-EEECCCC
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEee
Confidence            56899999999999999999999999999999999999999999999999999998 9999888

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.34  E-value=2.5e-12  Score=102.18  Aligned_cols=63  Identities=25%  Similarity=0.306  Sum_probs=57.0

Q ss_pred             CCCCCCCeEEEeCCCC--CchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC-CeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY-KNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~--GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~-~~v~~~~~D  159 (159)
                      |++++||+++|||+++  |||+++|++|+++|++|++++|+++.++++.+++++.+. + +..+++|
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   66 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPE-AHLYQID   66 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSS-CEEEECC
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCc-EEEEEcc
Confidence            5689999999999764  999999999999999999999999999999999987764 6 8888887

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.31  E-value=4.5e-12  Score=101.37  Aligned_cols=61  Identities=26%  Similarity=0.391  Sum_probs=55.8

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++||+++||||++|||+++|++|+++|++|++++|+.+  ++..+++++.|.+ +..+++|
T Consensus         4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~-~~~~~~D   64 (247)
T 4hp8_A            4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGN-ASALLID   64 (247)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCC-EEEEECC
T ss_pred             CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCc-EEEEEcc
Confidence            35799999999999999999999999999999999999865  6778889999998 9999988

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.27  E-value=8.2e-12  Score=99.05  Aligned_cols=66  Identities=23%  Similarity=0.333  Sum_probs=59.7

Q ss_pred             CCCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC-CCeEEEEecC
Q psy2040          93 PPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG-YKNIHTYKRS  159 (159)
Q Consensus        93 ~~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g-~~~v~~~~~D  159 (159)
                      |.+|.+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+ .+ +..+++|
T Consensus         2 p~~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D   68 (262)
T 3pk0_A            2 PGSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGK-VIGVQTD   68 (262)
T ss_dssp             -CCTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSC-EEEEECC
T ss_pred             CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCc-EEEEEcC
Confidence            446778999999999999999999999999999999999999999999999998876 56 8888887

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.24  E-value=1.7e-11  Score=98.35  Aligned_cols=61  Identities=13%  Similarity=0.288  Sum_probs=54.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++||+++||||++|||+++|++|+++|++|++++|++++.+ ..+++.+.+.+ +.++++|
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~-~~~~~~D   63 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPR-ATYLPVE   63 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTT-CEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCC-EEEEEee
Confidence            3689999999999999999999999999999999999988754 55677778888 8999987

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.24  E-value=1.1e-11  Score=100.30  Aligned_cols=58  Identities=22%  Similarity=0.263  Sum_probs=52.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++.++++   +.+ +..+++|
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~-~~~~~~D   83 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGG-AVGIQAD   83 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTT-CEEEECC
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCC-eEEEEec
Confidence            489999999999999999999999999999999999998888877766   666 8888887

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.23  E-value=1.6e-11  Score=97.17  Aligned_cols=67  Identities=19%  Similarity=0.236  Sum_probs=58.4

Q ss_pred             CCCCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          92 IPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        92 ~~~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++|.++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+.+ +..+++|
T Consensus        20 ~~~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   86 (262)
T 3rkr_A           20 DDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGE-AESHACD   86 (262)
T ss_dssp             -----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred             CcchhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCc-eeEEEec
Confidence            345677889999999999999999999999999999999999999999999999888887 8888887

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.23  E-value=2e-11  Score=96.42  Aligned_cols=61  Identities=21%  Similarity=0.261  Sum_probs=57.1

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +.++++|
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   64 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGR-IVARSLD   64 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCE-EEEEECC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEECc
Confidence            567999999999999999999999999999999999999999999999988888 8999887

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.23  E-value=2.3e-11  Score=96.75  Aligned_cols=66  Identities=24%  Similarity=0.392  Sum_probs=57.8

Q ss_pred             CCCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC------------CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          93 PPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID------------EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        93 ~~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~------------~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |.+|.+++||+++||||++|||+++|++|+++|++|++++|+            .+.+++..+++++.+.+ +..+++|
T Consensus         2 p~~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   79 (287)
T 3pxx_A            2 PGSMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRK-AYTAEVD   79 (287)
T ss_dssp             TTSCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSC-EEEEECC
T ss_pred             CCcccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCc-eEEEEcc
Confidence            456778999999999999999999999999999999999987            55567777788777887 8888887

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.20  E-value=2.6e-11  Score=95.87  Aligned_cols=63  Identities=24%  Similarity=0.410  Sum_probs=58.6

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +..+++|
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   69 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK-AIGLECN   69 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEECC
Confidence            45688999999999999999999999999999999999999999999999888888 8888887

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.20  E-value=3.3e-11  Score=96.49  Aligned_cols=62  Identities=19%  Similarity=0.264  Sum_probs=58.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +..+++|
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   89 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK-ALPIRCD   89 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCC-CEEEECC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEEcC
Confidence            4688999999999999999999999999999999999999999999999888888 8888887

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.20  E-value=3e-11  Score=94.54  Aligned_cols=63  Identities=19%  Similarity=0.355  Sum_probs=57.9

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +..+++|
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   66 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT-AISVAVD   66 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence            35678999999999999999999999999999999999999999999999888887 8888887

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.20  E-value=2.1e-11  Score=98.02  Aligned_cols=65  Identities=23%  Similarity=0.270  Sum_probs=55.9

Q ss_pred             CCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..|.++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +..+++|
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   85 (283)
T 3v8b_A           21 QSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQ-AIALEAD   85 (283)
T ss_dssp             ------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCC-EEEEECC
T ss_pred             hhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence            3466788999999999999999999999999999999999999999999999888888 8888887

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.19  E-value=3.4e-11  Score=95.97  Aligned_cols=65  Identities=25%  Similarity=0.335  Sum_probs=54.9

Q ss_pred             CCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC------------CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID------------EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~------------~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+|.+++||+++||||++|||+++|++|+++|++|++++|+            .+.+++..+++++.+.+ +.++++|
T Consensus         3 ~~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   79 (281)
T 3s55_A            3 GSMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRR-CISAKVD   79 (281)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CcccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCe-EEEEeCC
Confidence            45678899999999999999999999999999999999997            44566777777777888 8888887

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.19  E-value=4.7e-11  Score=94.63  Aligned_cols=61  Identities=15%  Similarity=0.311  Sum_probs=57.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +.++++|
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   68 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR-ALSVGTD   68 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcC
Confidence            478999999999999999999999999999999999999999999999888888 8999887

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.19  E-value=3.8e-11  Score=97.20  Aligned_cols=65  Identities=20%  Similarity=0.254  Sum_probs=59.2

Q ss_pred             CCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC-CCeEEEEecC
Q psy2040          94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG-YKNIHTYKRS  159 (159)
Q Consensus        94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g-~~~v~~~~~D  159 (159)
                      +.|.++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+ .+ +.++++|
T Consensus        34 ~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D   99 (293)
T 3rih_A           34 KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGN-VIGVRLD   99 (293)
T ss_dssp             CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSC-EEEEECC
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCc-EEEEEEe
Confidence            44677899999999999999999999999999999999999999999999998776 56 8888887

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.19  E-value=4.5e-11  Score=95.02  Aligned_cols=71  Identities=42%  Similarity=0.687  Sum_probs=58.6

Q ss_pred             HhhhCCCCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          88 LLTLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        88 ~~~~~~~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++.+.+.++.++++|+++||||++|||+++|++|+++|++|++++|+++..+++.+++++.+.+ +.++++|
T Consensus        18 ~~~~~~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   88 (272)
T 1yb1_A           18 FQGHMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK-VHTFVVD   88 (272)
T ss_dssp             -------CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             eccccCCcccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCe-EEEEEee
Confidence            3445555667789999999999999999999999999999999999998888888888887777 8888887

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.18  E-value=2.4e-11  Score=97.12  Aligned_cols=63  Identities=21%  Similarity=0.270  Sum_probs=58.4

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+.+ +.++++|
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   83 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHD-AEAVAFD   83 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCC-EEECCCC
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEcC
Confidence            35688999999999999999999999999999999999999999999999888888 8888887

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.18  E-value=5e-11  Score=96.47  Aligned_cols=63  Identities=25%  Similarity=0.418  Sum_probs=58.6

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |.+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +.++++|
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   88 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFD-AHGVVCD   88 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-eEEEEcc
Confidence            45588999999999999999999999999999999999999999999999888888 8888887

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.17  E-value=3.9e-11  Score=95.30  Aligned_cols=64  Identities=30%  Similarity=0.421  Sum_probs=57.9

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH-cCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE-QGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~-~g~~~v~~~~~D  159 (159)
                      .+.+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++++ .+.+ +.++++|
T Consensus        14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D   78 (266)
T 4egf_A           14 GVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTD-VHTVAID   78 (266)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCC-EEEEECC
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCc-EEEEEec
Confidence            45578899999999999999999999999999999999999999999988877 4777 8888887

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.17  E-value=2.9e-11  Score=95.46  Aligned_cols=61  Identities=20%  Similarity=0.367  Sum_probs=56.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+.+ +..+++|
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   63 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQ-ILTVQMD   63 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTC-EEEEECC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence            578999999999999999999999999999999999999999999999877777 8888887

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.17  E-value=5.7e-11  Score=95.07  Aligned_cols=62  Identities=18%  Similarity=0.297  Sum_probs=57.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++||+++||||++|||+++|++|+++|++|++++|++++.++..+++++.+.+ +..+++|
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   90 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGT-AQELAGD   90 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCC-EEEEECC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCe-EEEEEec
Confidence            3578999999999999999999999999999999999999999999999888888 8888887

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.17  E-value=2.6e-11  Score=97.42  Aligned_cols=63  Identities=25%  Similarity=0.340  Sum_probs=57.2

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |.+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +.++++|
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   65 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGE-AAALAGD   65 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCC-EEECCCC
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEECC
Confidence            45678999999999999999999999999999999999999999999999877777 8888887

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.17  E-value=4.7e-11  Score=93.99  Aligned_cols=63  Identities=25%  Similarity=0.373  Sum_probs=56.0

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC-CeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY-KNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~-~~v~~~~~D  159 (159)
                      ...++||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+. + +.++++|
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   70 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQ-PQWFILD   70 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCC-CEEEECC
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCC-ceEEEEe
Confidence            4568899999999999999999999999999999999999999999998877654 5 7777776

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.16  E-value=6.7e-11  Score=96.47  Aligned_cols=66  Identities=26%  Similarity=0.405  Sum_probs=57.7

Q ss_pred             CCCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC----------CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          93 PPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID----------EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        93 ~~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~----------~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |..|.+++||+++||||++|||+++|++|+++|++|++++|+          .+..++..+++++.+.+ +..+++|
T Consensus        19 p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   94 (322)
T 3qlj_A           19 PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGE-AVADGSN   94 (322)
T ss_dssp             ---CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCE-EEEECCC
T ss_pred             CchhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCc-EEEEECC
Confidence            345667899999999999999999999999999999999998          67788899999888887 8888887

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.15  E-value=3.2e-11  Score=96.86  Aligned_cols=65  Identities=20%  Similarity=0.249  Sum_probs=52.1

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+.+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+.+.+.++++|
T Consensus        27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D   91 (281)
T 4dry_A           27 GKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCD   91 (281)
T ss_dssp             -------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECC
T ss_pred             cCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence            34567899999999999999999999999999999999999999999999887755514788887

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.15  E-value=5.7e-11  Score=94.85  Aligned_cols=60  Identities=17%  Similarity=0.235  Sum_probs=56.1

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +..+++|
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   61 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGT-ALAQVLD   61 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEcC
Confidence            46899999999999999999999999999999999999999999999888887 8888887

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.15  E-value=7.2e-11  Score=94.17  Aligned_cols=64  Identities=30%  Similarity=0.466  Sum_probs=55.9

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-------------CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-------------DEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-------------~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .|.+++||+++||||++|||+++|++|+++|++|++++|             +++++++..+++++.+.+ +..+++|
T Consensus         9 ~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   85 (280)
T 3pgx_A            9 QAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRK-ALTRVLD   85 (280)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCC-EEEEECC
T ss_pred             cccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCe-EEEEEcC
Confidence            456789999999999999999999999999999999998             566778888888888888 8888887

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.15  E-value=7.8e-11  Score=91.89  Aligned_cols=61  Identities=26%  Similarity=0.412  Sum_probs=56.9

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++.++..+++++.+.+ +..+++|
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   62 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFK-ARGLVLN   62 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEec
Confidence            467999999999999999999999999999999999999999999999888888 8888887

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.14  E-value=6e-11  Score=94.91  Aligned_cols=61  Identities=16%  Similarity=0.238  Sum_probs=54.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+.+ +..+++|
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   81 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHD-VDGSSCD   81 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC-EEEEECC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEECC
Confidence            457899999999999999999999999999999999999999999999888888 8888887

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.14  E-value=9.5e-11  Score=92.41  Aligned_cols=62  Identities=21%  Similarity=0.341  Sum_probs=56.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+.+ +..+++|
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   66 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK-VEASVCD   66 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcC
Confidence            3578999999999999999999999999999999999998888888888877777 8888887

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.14  E-value=1e-10  Score=93.38  Aligned_cols=64  Identities=25%  Similarity=0.360  Sum_probs=57.6

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .|.++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +..+++|
T Consensus        16 ~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   79 (277)
T 2rhc_B           16 HMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE-ADGRTCD   79 (277)
T ss_dssp             TTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEECC
Confidence            454678999999999999999999999999999999999998888888888877777 8888887

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.14  E-value=1.1e-10  Score=93.60  Aligned_cols=64  Identities=17%  Similarity=0.260  Sum_probs=57.2

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .|.++++|+++||||++|||+++|++|+++|++|+++++ +++..++..+++++.+.+ +.++++|
T Consensus        23 mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   87 (280)
T 4da9_A           23 MMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGAR-VIFLRAD   87 (280)
T ss_dssp             CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             hhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCc-EEEEEec
Confidence            355688999999999999999999999999999999985 677788888999888888 8999887

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.14  E-value=9.5e-11  Score=91.98  Aligned_cols=61  Identities=23%  Similarity=0.360  Sum_probs=56.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +..+++|
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   64 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAK-VHVLELD   64 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEECC
Confidence            467899999999999999999999999999999999998889998999877777 8888887

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.13  E-value=7.5e-11  Score=94.15  Aligned_cols=62  Identities=21%  Similarity=0.368  Sum_probs=57.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|+++.++++.+++++.+.+ +..+++|
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   85 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLE-GRGAVLN   85 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCC-CEEEECC
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEEe
Confidence            3578999999999999999999999999999999999999999999999888877 8888887

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.13  E-value=7.4e-11  Score=94.08  Aligned_cols=63  Identities=19%  Similarity=0.240  Sum_probs=53.8

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC-CeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY-KNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~-~~v~~~~~D  159 (159)
                      +..+++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+. + +.++++|
T Consensus         7 ~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D   70 (311)
T 3o26_A            7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHEN-VVFHQLD   70 (311)
T ss_dssp             -----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCS-EEEEECC
T ss_pred             CccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEcc
Confidence            3456799999999999999999999999999999999999999999999987764 5 8888887

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.13  E-value=1e-10  Score=92.55  Aligned_cols=63  Identities=22%  Similarity=0.392  Sum_probs=55.3

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D  159 (159)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.+ +..+++|
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D   72 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAE-VLTTVAD   72 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCC-EEEEECC
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCce-EEEEEcc
Confidence            45678999999999999999999999999999999999998888888888766  666 8888887

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.13  E-value=1.1e-10  Score=92.74  Aligned_cols=65  Identities=29%  Similarity=0.405  Sum_probs=55.3

Q ss_pred             CCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC-CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~-~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+.++++||+++||||++|||+++|++|+++|++|++++|+ ++..++..+++++.+.+ +..+++|
T Consensus        22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   87 (271)
T 4iin_A           22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYK-AAVIKFD   87 (271)
T ss_dssp             --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc-eEEEECC
Confidence            34457889999999999999999999999999999999994 55567777888888887 8888887

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.12  E-value=1.1e-10  Score=92.79  Aligned_cols=64  Identities=25%  Similarity=0.415  Sum_probs=55.2

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC------------CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID------------EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~------------~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+.+++||+++||||++|||+++|++|+++|++|++++|+            .+++++..++++..+.+ +.++++|
T Consensus         7 ~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   82 (278)
T 3sx2_A            7 SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSR-IVARQAD   82 (278)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCC-EEEEECC
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCe-EEEEeCC
Confidence            3457889999999999999999999999999999999987            55677777778777888 8899887

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.12  E-value=1.2e-10  Score=93.38  Aligned_cols=62  Identities=19%  Similarity=0.290  Sum_probs=55.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc-------cHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK-------GNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~-------~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++++|+++||||++|||+++|++|+++|++|++++|+++       .+++..+++++.+.+ +.++++|
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   73 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ-ALPIVGD   73 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSE-EEEEECC
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCc-EEEEECC
Confidence            4578999999999999999999999999999999999876       577888888888888 8899887

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.12  E-value=1.2e-10  Score=91.79  Aligned_cols=63  Identities=22%  Similarity=0.361  Sum_probs=56.3

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+.+ +..+++|
T Consensus         9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   71 (260)
T 2zat_A            9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLS-VTGTVCH   71 (260)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEcc
Confidence            34578999999999999999999999999999999999998888888888877777 8888877

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.12  E-value=1.2e-10  Score=92.18  Aligned_cols=63  Identities=24%  Similarity=0.333  Sum_probs=55.6

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEE-cCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCW-DIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~-~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.+++||+++||||++|||+++|++|+++|++|+++ +++++..++..+++++.+.+ +..+++|
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   66 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRS-ALAIKAD   66 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSC-CEEEECC
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc-eEEEEcC
Confidence            356789999999999999999999999999999998 66777788888888888887 8888887

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.12  E-value=9.7e-11  Score=93.46  Aligned_cols=62  Identities=24%  Similarity=0.305  Sum_probs=56.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC---CeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY---KNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~---~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+.   + +.++++|
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~~D   71 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGA-IRYEPTD   71 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCE-EEEEECC
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCce-EEEEeCC
Confidence            367899999999999999999999999999999999999999999999987765   6 7888887

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.12  E-value=1e-10  Score=92.27  Aligned_cols=61  Identities=21%  Similarity=0.240  Sum_probs=55.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +..+++|
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   62 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQ-CVPVVCD   62 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSE-EEEEECC
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCc-eEEEECC
Confidence            367899999999999999999999999999999999998888888888877777 8888887

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.12  E-value=1.5e-10  Score=94.60  Aligned_cols=63  Identities=22%  Similarity=0.396  Sum_probs=57.3

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC--CeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY--KNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~--~~v~~~~~D  159 (159)
                      |.++.+|+++||||++|||+++|++|+++|++|++++|++++++++.++++..+.  + +..+++|
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~D   67 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPE-VMGVQLD   67 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGG-EEEEECC
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCe-EEEEECC
Confidence            4567899999999999999999999999999999999999999999999987765  6 8888887

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.11  E-value=1.1e-10  Score=93.08  Aligned_cols=62  Identities=23%  Similarity=0.396  Sum_probs=55.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC---CeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY---KNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~---~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+.   + +..+++|
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   66 (280)
T 1xkq_A            2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQ-VNSVVAD   66 (280)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGG-EEEEECC
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcc-eEEEEec
Confidence            357899999999999999999999999999999999999888888888877665   6 8888887

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.11  E-value=1.1e-10  Score=93.87  Aligned_cols=64  Identities=16%  Similarity=0.157  Sum_probs=53.9

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEc-CCCccHHHHHHHHH-HcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWD-IDEKGNNETKQMLE-EQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~-r~~~~~~~~~~ei~-~~g~~~v~~~~~D  159 (159)
                      .|.++++|+++||||++|||+++|++|+++|++|++++ |++++++++.++++ +.+.+ +..+++|
T Consensus         3 ~m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D   68 (291)
T 1e7w_A            3 HMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNS-AITVQAD   68 (291)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTC-EEEEECC
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCe-eEEEEee
Confidence            35568899999999999999999999999999999999 99988888888887 55667 8888887

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.11  E-value=1.5e-10  Score=92.05  Aligned_cols=62  Identities=23%  Similarity=0.346  Sum_probs=56.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+.+ +..+++|
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   78 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN-VEGSVCD   78 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEECC
Confidence            4578999999999999999999999999999999999998888888888877777 8888887

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.11  E-value=1.4e-10  Score=91.75  Aligned_cols=61  Identities=21%  Similarity=0.445  Sum_probs=55.9

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +..+++|
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   64 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE-ARSYVCD   64 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSC-EEEEECC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEec
Confidence            467999999999999999999999999999999999998888888888877777 8888887

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.11  E-value=1.5e-10  Score=92.13  Aligned_cols=64  Identities=22%  Similarity=0.367  Sum_probs=55.3

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH-HHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML-EEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei-~~~g~~~v~~~~~D  159 (159)
                      +..++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++ ++.+.+ +..+++|
T Consensus        15 ~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D   79 (267)
T 1vl8_A           15 EVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE-TMAFRCD   79 (267)
T ss_dssp             --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCC-EEEEECC
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCe-EEEEEcC
Confidence            445688999999999999999999999999999999999998888888887 455777 8888887

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.11  E-value=1.5e-10  Score=92.54  Aligned_cols=62  Identities=26%  Similarity=0.399  Sum_probs=54.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC----------------CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID----------------EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~----------------~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++||+++||||++|||+++|++|+++|++|++++|+                ++++++..+++++.+.+ +..+++|
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   84 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRR-IVTAEVD   84 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCC-EEEEECC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCc-eEEEEcC
Confidence            46789999999999999999999999999999999887                55677777788777887 8888887

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.11  E-value=1.2e-10  Score=94.12  Aligned_cols=64  Identities=28%  Similarity=0.407  Sum_probs=55.8

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC---CeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY---KNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~---~~v~~~~~D  159 (159)
                      .|+++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+.   + +.++++|
T Consensus        20 ~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~~D   86 (297)
T 1xhl_A           20 HMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEK-INAVVAD   86 (297)
T ss_dssp             ---CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGG-EEEEECC
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCce-EEEEecC
Confidence            45568899999999999999999999999999999999999888888888887766   6 8888887

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.11  E-value=1.6e-10  Score=91.55  Aligned_cols=62  Identities=13%  Similarity=0.222  Sum_probs=55.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-C-CCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-G-YKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g-~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++. + .+ +..+++|
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~D   67 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGAR-LFASVCD   67 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCC-EEEEECC
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCce-EEEEeCC
Confidence            4678999999999999999999999999999999999999999999998874 3 34 7788887

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.11  E-value=2e-10  Score=91.56  Aligned_cols=62  Identities=18%  Similarity=0.237  Sum_probs=55.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc-------HHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG-------NNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~-------~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++       +++..++++..+.+ +.++++|
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   70 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ-GLALKCD   70 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSE-EEEEECC
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCe-EEEEeCC
Confidence            35789999999999999999999999999999999998753       67778888887887 8888887

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.11  E-value=1.8e-10  Score=89.63  Aligned_cols=64  Identities=25%  Similarity=0.385  Sum_probs=55.4

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC-CCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG-YKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g-~~~v~~~~~D  159 (159)
                      .+.+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+ .+ +..+.+|
T Consensus         8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~d   72 (247)
T 3i1j_A            8 HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQ-PLIIALN   72 (247)
T ss_dssp             CTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCC-CEEEECC
T ss_pred             CCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCC-ceEEEec
Confidence            3456889999999999999999999999999999999999999999999998776 34 5565554

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.11  E-value=1.6e-10  Score=93.29  Aligned_cols=62  Identities=24%  Similarity=0.388  Sum_probs=55.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC------------CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID------------EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~------------~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++||+++||||++|||+++|++|+++|++|++++|+            ++++++..+++++.+.+ +..+++|
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   97 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRR-IIASQVD   97 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCc-eEEEECC
Confidence            35889999999999999999999999999999999987            55677788888888888 8999887

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.10  E-value=1.7e-10  Score=92.08  Aligned_cols=62  Identities=21%  Similarity=0.297  Sum_probs=55.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      ..++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+. +.+ +..+++|
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   85 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRR-CLPLSMD   85 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSC-EEEEECC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCc-EEEEEcC
Confidence            4578999999999999999999999999999999999998888888888654 667 8888887

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.10  E-value=1.7e-10  Score=91.95  Aligned_cols=62  Identities=23%  Similarity=0.305  Sum_probs=55.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++.++ +++..+++.+++++.+.+ +..+++|
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   86 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGE-AFAVKAD   86 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCc-EEEEECC
Confidence            4578999999999999999999999999999999888 667788888888888888 8888887

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.09  E-value=2e-10  Score=91.50  Aligned_cols=62  Identities=26%  Similarity=0.397  Sum_probs=54.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-------------CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-------------DEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-------------~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++||+++||||++|||+++|++|+++|++|++++|             +.+++++..+++++.+.+ +..+++|
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   81 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRR-IVAAVVD   81 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCe-EEEEECC
Confidence            3688999999999999999999999999999999998             556677778888877887 8888887

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.09  E-value=1.5e-10  Score=92.74  Aligned_cols=65  Identities=20%  Similarity=0.266  Sum_probs=53.5

Q ss_pred             CCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHHH-HcCCCeEEEEecC
Q psy2040          94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQMLE-EQGYKNIHTYKRS  159 (159)
Q Consensus        94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei~-~~g~~~v~~~~~D  159 (159)
                      +...++++|+++||||++|||+++|++|+++|++|++++|++ ++++++.++++ +.+.+ +.++++|
T Consensus        16 ~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~D   82 (288)
T 2x9g_A           16 PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNT-AVVCQAD   82 (288)
T ss_dssp             ------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTC-EEEEECC
T ss_pred             CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCc-eEEEEee
Confidence            344568899999999999999999999999999999999998 88888888887 45666 8888887

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.09  E-value=1.8e-10  Score=90.10  Aligned_cols=60  Identities=27%  Similarity=0.445  Sum_probs=54.3

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++|+++||||++|||+++|++|+++|++|++++| ++++.+++.+++++.+.+ +..+++|
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   62 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSD-AIAVRAD   62 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc-EEEEEcC
Confidence            57899999999999999999999999999999999 788888888888877777 8888887

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.09  E-value=1.9e-10  Score=91.61  Aligned_cols=64  Identities=27%  Similarity=0.333  Sum_probs=53.5

Q ss_pred             CCCCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          92 IPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        92 ~~~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+..|.+++||+++||||++|||+++|++|+++|++|++.+|+++++++..+++   +.+ +..+++|
T Consensus        18 g~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   81 (266)
T 3grp_A           18 GPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKD-VFVFSAN   81 (266)
T ss_dssp             ---CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSS-EEEEECC
T ss_pred             CCcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc-eEEEEee
Confidence            345677899999999999999999999999999999999999988777766544   666 8888877

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.09  E-value=2.2e-10  Score=90.38  Aligned_cols=61  Identities=21%  Similarity=0.407  Sum_probs=55.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++. +.+ +..+++|
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D   65 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVR-VLEVAVD   65 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCC-EEEEECC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCc-eEEEEcC
Confidence            467999999999999999999999999999999999998888888888766 667 8888887

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.09  E-value=1.9e-10  Score=93.80  Aligned_cols=64  Identities=30%  Similarity=0.462  Sum_probs=54.7

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC------------CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID------------EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~------------~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +|.+++||+++||||++|||+++|++|+++|++|++++++            .+++++..+++++.+.+ +.++++|
T Consensus        40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D  115 (317)
T 3oec_A           40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRR-IIARQAD  115 (317)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCe-EEEEECC
Confidence            4667899999999999999999999999999999999876            45567777778777888 8888887

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.08  E-value=1.5e-10  Score=91.75  Aligned_cols=64  Identities=28%  Similarity=0.412  Sum_probs=55.6

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC---CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID---EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~---~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+.++++|+++||||++|||+++|++|+++|++|++++|+   .++++++.+++++.+.+ +.++++|
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   71 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAK-VALYQSD   71 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCE-EEEEECC
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCc-EEEEECC
Confidence            4567899999999999999999999999999999998764   45677888888887887 8888887

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.08  E-value=2.4e-10  Score=89.29  Aligned_cols=62  Identities=16%  Similarity=0.284  Sum_probs=56.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||++++++|+++|++|++++|++++.++..+++++.+.+ +..+++|
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   70 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHD-VSSVVMD   70 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEec
Confidence            4578999999999999999999999999999999999988888888888877777 8888887

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.08  E-value=1.4e-10  Score=92.77  Aligned_cols=66  Identities=21%  Similarity=0.211  Sum_probs=48.9

Q ss_pred             hhCCCCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          90 TLIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        90 ~~~~~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+..+.|.++.+|+++||||++|||+++|++|+++|++|++++|+++++++..+++   +.+ +..+++|
T Consensus        17 ~~~~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   82 (272)
T 4dyv_A           17 NLYFQSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDD-ALCVPTD   82 (272)
T ss_dssp             -----------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---TSC-CEEEECC
T ss_pred             eeehhhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCC-eEEEEec
Confidence            33345566788999999999999999999999999999999999988888777766   345 7777776

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.08  E-value=1.8e-10  Score=90.53  Aligned_cols=59  Identities=27%  Similarity=0.504  Sum_probs=51.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++   +.+ +..+++|
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   60 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKK-ARAIAAD   60 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTT-EEECCCC
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc-eEEEEcC
Confidence            4678999999999999999999999999999999999988888777666   556 7777776

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.08  E-value=1.7e-10  Score=91.22  Aligned_cols=60  Identities=13%  Similarity=0.331  Sum_probs=51.8

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |.+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++   +.+ +..+++|
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   62 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPR-VHALRSD   62 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGG-EEEEECC
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc-ceEEEcc
Confidence            45688999999999999999999999999999999999988887777665   445 7777776

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.07  E-value=1.9e-10  Score=91.23  Aligned_cols=62  Identities=18%  Similarity=0.166  Sum_probs=53.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++| ++++++++.+++++. +.+ +.++++|
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D   70 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGS-AVLCKGD   70 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTC-EEEEECC
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCc-eEEEecc
Confidence            3467899999999999999999999999999999999 888888888888776 667 8888887

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.07  E-value=1.8e-10  Score=92.15  Aligned_cols=63  Identities=24%  Similarity=0.352  Sum_probs=54.9

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.+ + +..+++|
T Consensus        23 ~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~-~~~~~~D   85 (276)
T 2b4q_A           23 PYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-D-CQAIPAD   85 (276)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-C-EEECCCC
T ss_pred             cccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-c-eEEEEee
Confidence            4456889999999999999999999999999999999999988888888886555 6 7777776

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.07  E-value=3.9e-10  Score=93.51  Aligned_cols=64  Identities=20%  Similarity=0.256  Sum_probs=57.1

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc-------HHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG-------NNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~-------~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+.+++||+++||||++|||+++|++|+++|++|++++|++++       +++..+++++.+.+ +..+++|
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~-~~~~~~D  109 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK-ALPCIVD  109 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCE-EEEEECC
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCe-EEEEEcc
Confidence            4567899999999999999999999999999999999998764       67788888888888 8888887

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.07  E-value=1.9e-10  Score=91.57  Aligned_cols=60  Identities=17%  Similarity=0.328  Sum_probs=53.3

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++   +.+ +.++++|
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~-~~~~~~D   84 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNR-AEFVSTN   84 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTT-EEEEECC
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCc-eEEEEcC
Confidence            45688999999999999999999999999999999999998888877766   556 7888887

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.07  E-value=2.2e-10  Score=90.85  Aligned_cols=62  Identities=24%  Similarity=0.329  Sum_probs=54.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|+++.+++..+++++.+  .+ +..+++|
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~D   69 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAI-LQPVVAD   69 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCE-EEEEECC
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCce-EEEEecC
Confidence            35789999999999999999999999999999999999999999999998774  44 6677776

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.06  E-value=1.9e-10  Score=90.61  Aligned_cols=61  Identities=13%  Similarity=0.169  Sum_probs=54.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc--C-CCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ--G-YKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~--g-~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  + .+ +.++++|
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   67 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQE-PIVLPLD   67 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCC-CEEEECC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCc-ceEEecc
Confidence            467899999999999999999999999999999999999999999988775  3 45 7788887

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.06  E-value=4.3e-10  Score=90.54  Aligned_cols=63  Identities=33%  Similarity=0.553  Sum_probs=54.0

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc-HHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG-NNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~-~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+.+. .++..+++++.+.+ +..+++|
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D  105 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVK-CVLLPGD  105 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCC-EEEEESC
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCc-EEEEECC
Confidence            456889999999999999999999999999999999998764 45566666667777 8888887

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.06  E-value=3e-10  Score=87.92  Aligned_cols=59  Identities=22%  Similarity=0.296  Sum_probs=53.3

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHH-HcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLE-EQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~-~~g~~~v~~~~~D  159 (159)
                      ++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++. ..+.+ +.++++|
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   60 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE-VFYHHLD   60 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCC-EEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCe-EEEEEec
Confidence            36899999999999999999999999999999999999999988886 44677 8888887

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.06  E-value=3.5e-10  Score=88.02  Aligned_cols=61  Identities=21%  Similarity=0.330  Sum_probs=55.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC-CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~-~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||++++++|+++|++|++++|+ +++.+++.++++..+.+ +..+++|
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   65 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGD-AAFFAAD   65 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCE-EEEEECC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCc-eEEEECC
Confidence            4678999999999999999999999999999999998 88888888888877777 8888887

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.06  E-value=3.8e-10  Score=90.15  Aligned_cols=62  Identities=26%  Similarity=0.486  Sum_probs=54.6

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.+++||+++||||++|||+++|++|+++|++|++++|+ +..++..+++++.+.+ +..+++|
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~-~~~~~~D   87 (273)
T 3uf0_A           26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGS-AEAVVAD   87 (273)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCE-EEEEECC
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCc-EEEEEec
Confidence            356889999999999999999999999999999999965 5677888888887877 8888887

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.06  E-value=5e-10  Score=88.28  Aligned_cols=64  Identities=25%  Similarity=0.392  Sum_probs=56.8

Q ss_pred             CCCCCCCCeEEEeCCC-CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC-CCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAG-NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG-YKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s-~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g-~~~v~~~~~D  159 (159)
                      .+.++++|+++||||+ +|||+++|++|+++|++|++++|+.+++++..+++++.+ .+ +.++++|
T Consensus        16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D   81 (266)
T 3o38_A           16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGR-VEAVVCD   81 (266)
T ss_dssp             CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSC-EEEEECC
T ss_pred             cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence            3456889999999997 599999999999999999999999999999999997765 46 8888887

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.05  E-value=2.6e-10  Score=91.39  Aligned_cols=63  Identities=13%  Similarity=0.163  Sum_probs=53.7

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      +.++++|+++||||++|||+++|++|+++|++|++++| +++..++..+++++. +.+ +.++++|
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D   84 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGT-VLHHPAD   84 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSC-EEEECCC
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCc-EEEEeCC
Confidence            45688999999999999999999999999999999999 566778888888766 556 8888887

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.05  E-value=4.2e-10  Score=89.84  Aligned_cols=62  Identities=19%  Similarity=0.329  Sum_probs=55.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC-CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~-~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++||+++||||++|||+++|++|+++|++|++++++ .++.+++.+++++.+.+ +..+++|
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~D   89 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGR-AVAIRAD   89 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc-EEEEECC
Confidence            45789999999999999999999999999999998665 56688888899888888 8888887

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.05  E-value=3e-10  Score=89.85  Aligned_cols=59  Identities=24%  Similarity=0.372  Sum_probs=54.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEE-cCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCW-DIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~-~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++|+++||||++|||+++|++|+++|++|++. +|+++.+++..+++++.+.+ +..+++|
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   62 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK-VLVVKAN   62 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCC-EEEEECC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc-EEEEEcC
Confidence            58999999999999999999999999999996 89998899999999888888 8899887

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.05  E-value=4.3e-10  Score=88.39  Aligned_cols=63  Identities=21%  Similarity=0.348  Sum_probs=56.6

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..++++|+++||||++|||++++++|+++|++|++++|++++.++..+++++.+.+ +..+++|
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   71 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ-VTGSVCD   71 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe-eEEEECC
Confidence            35678999999999999999999999999999999999998888888888877777 8888877

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.05  E-value=4.4e-10  Score=89.43  Aligned_cols=59  Identities=22%  Similarity=0.285  Sum_probs=52.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++   +.+ +..+++|
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   65 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRG-AVHHVVD   65 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTT-CEEEECC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCC-eEEEECC
Confidence            3678999999999999999999999999999999999999988887766   555 7777776

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.05  E-value=1.9e-10  Score=91.27  Aligned_cols=62  Identities=19%  Similarity=0.302  Sum_probs=53.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHH---HcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLE---EQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~---~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++.   ..+.+ +..+++|
T Consensus         2 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   66 (278)
T 1spx_A            2 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQN-VNSVVAD   66 (278)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGG-EEEEECC
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCc-eeEEecc
Confidence            35779999999999999999999999999999999999988888888873   23445 7778777

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.05  E-value=3.1e-10  Score=88.31  Aligned_cols=62  Identities=27%  Similarity=0.490  Sum_probs=56.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||++++++|+++|++|++++|++++.++..+++++.+.+ +..+++|
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   68 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ-AFACRCD   68 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCc-eEEEEcC
Confidence            4578999999999999999999999999999999999998888888888877777 8888887

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.04  E-value=3.6e-10  Score=89.10  Aligned_cols=60  Identities=30%  Similarity=0.453  Sum_probs=51.6

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |.++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++   +.+ +..+++|
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   62 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPA-AYAVQMD   62 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTT-EEEEECC
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCC-ceEEEee
Confidence            34678999999999999999999999999999999999988887777666   455 7777776

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.04  E-value=3.9e-10  Score=88.52  Aligned_cols=60  Identities=32%  Similarity=0.504  Sum_probs=51.9

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++   +.+ +..+++|
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   63 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDA-ALAVAAD   63 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTT-EEEEECC
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCc-eEEEEec
Confidence            45688999999999999999999999999999999999998888777655   556 7777776

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.04  E-value=1.4e-10  Score=92.91  Aligned_cols=63  Identities=14%  Similarity=0.275  Sum_probs=53.7

Q ss_pred             CCCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          93 PPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        93 ~~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +..+.+++||+++||||++|||+++|++|+++|++|++++|++++.++..+++   +.+ +.++++|
T Consensus         8 ~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   70 (291)
T 3rd5_A            8 AADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQ-VEVRELD   70 (291)
T ss_dssp             GGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSE-EEEEECC
T ss_pred             hhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCC-eeEEEcC
Confidence            34567789999999999999999999999999999999999988777766554   555 7788877

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.04  E-value=5.2e-10  Score=88.84  Aligned_cols=63  Identities=22%  Similarity=0.336  Sum_probs=55.7

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.+++||+++||||++|||+++|++|+++|++|++.++ +++..+++.+++++.+.+ +.++++|
T Consensus        13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   76 (270)
T 3is3_A           13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSD-AIAIKAD   76 (270)
T ss_dssp             TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc-EEEEEcC
Confidence            45688999999999999999999999999999999776 456678888899888888 8899887

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.04  E-value=3.9e-10  Score=88.84  Aligned_cols=60  Identities=22%  Similarity=0.359  Sum_probs=53.4

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc-HHHHHHHHHHc-CCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG-NNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~-~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      +++|+++||||++|||+++|++|+++|++|++++|++++ ++++.+++++. +.+ +..+++|
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D   63 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK-VLYDGAD   63 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSC-EEEECCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCc-EEEEECC
Confidence            568999999999999999999999999999999999887 88888888765 666 7888877

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.03  E-value=2.7e-10  Score=89.59  Aligned_cols=61  Identities=26%  Similarity=0.305  Sum_probs=54.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHH---CCCEEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQ---HKVTLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~---~Ga~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|++   +|++|++++|++++++++.+++++.  +.+ +..+++|
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~D   68 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK-VVLAAAD   68 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSE-EEEEECC
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCe-EEEEecC
Confidence            56789999999999999999999999   8999999999998899988888775  556 8888887

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.03  E-value=3.6e-10  Score=92.66  Aligned_cols=63  Identities=16%  Similarity=0.161  Sum_probs=53.7

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEc-CCCccHHHHHHHHH-HcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWD-IDEKGNNETKQMLE-EQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~-r~~~~~~~~~~ei~-~~g~~~v~~~~~D  159 (159)
                      |.++++|+++||||++|||+++|++|+++|++|++++ |++++++++.++++ +.+.+ +.++++|
T Consensus        41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D  105 (328)
T 2qhx_A           41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNS-AITVQAD  105 (328)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTC-EEEEECC
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCe-EEEEEee
Confidence            4457899999999999999999999999999999999 99988888888887 45666 8888887

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.03  E-value=4.1e-10  Score=89.72  Aligned_cols=61  Identities=23%  Similarity=0.287  Sum_probs=52.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEE-cCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCW-DIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~-~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++|+++||||++|||+++|++|+++|++|++. .++++..+++.+++++.+.+ +..+++|
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   85 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGK-ALTAQAD   85 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCe-EEEEEcC
Confidence            4579999999999999999999999999999987 56677788888899888888 8888887

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.03  E-value=4.5e-10  Score=89.25  Aligned_cols=65  Identities=23%  Similarity=0.347  Sum_probs=56.4

Q ss_pred             CCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040          94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS  159 (159)
Q Consensus        94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D  159 (159)
                      +.|.++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++++.+  .+ +..+++|
T Consensus        25 ~~m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D   91 (279)
T 1xg5_A           25 PGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGT-LIPYRCD   91 (279)
T ss_dssp             TTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSE-EEEEECC
T ss_pred             ccccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCce-EEEEEec
Confidence            34556889999999999999999999999999999999999988888888888765  34 6777776

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.03  E-value=2.8e-10  Score=89.57  Aligned_cols=59  Identities=20%  Similarity=0.406  Sum_probs=42.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++++|+++||||++|||+++|++|+++|++|++++|+++..++..+++   +.+ +.++++|
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   61 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAA-VRFRNAD   61 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------CEEEECC
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCc-eEEEEcc
Confidence            3578999999999999999999999999999999999998887777665   445 6677776

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.03  E-value=4.6e-10  Score=88.29  Aligned_cols=58  Identities=22%  Similarity=0.393  Sum_probs=53.4

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +|+++|||+++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +..+++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   59 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH-AVAVKVD   59 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEec
Confidence            689999999999999999999999999999999998888888888877777 8888887

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.03  E-value=4.5e-10  Score=90.55  Aligned_cols=63  Identities=22%  Similarity=0.325  Sum_probs=54.1

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC--ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE--KGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~--~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.+++||+++||||++|||+++|++|+++|++|++++++.  +..+++.+++++.+.+ +.++++|
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D  108 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRK-AVLLPGD  108 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCC-EEECCCC
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCc-EEEEEec
Confidence            4568899999999999999999999999999999999873  4466777777777877 8888887

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.02  E-value=4.8e-10  Score=87.79  Aligned_cols=60  Identities=18%  Similarity=0.270  Sum_probs=53.6

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++|+++||||++|||+++|++|+++|++|++.++ ++++.+++.+++++.+.+ +..+++|
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   62 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVD-SFAIQAN   62 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSC-EEEEECC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence            46899999999999999999999999999999877 557788888999888888 8888887

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.02  E-value=4.6e-10  Score=89.93  Aligned_cols=59  Identities=25%  Similarity=0.538  Sum_probs=50.8

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++   +.+ +..+++|
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   83 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCG-AAACRVD   83 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSS-CEEEECC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCc-ceEEEec
Confidence            4578999999999999999999999999999999999988888777666   556 7777777

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.02  E-value=5.8e-10  Score=87.85  Aligned_cols=61  Identities=11%  Similarity=0.291  Sum_probs=53.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.+ +..+++|
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D   66 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQ-VDIVAGD   66 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCC-EEEEECC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCe-EEEEEcc
Confidence            467999999999999999999999999999999999998888888888754  336 7788877

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.02  E-value=4.4e-10  Score=88.02  Aligned_cols=62  Identities=26%  Similarity=0.451  Sum_probs=54.8

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||++++++|+++|++|++++| +++..+++.+++++.+.+ +.++++|
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~-~~~~~~D   65 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE-AIAVKGD   65 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCc-eEEEECC
Confidence            3577899999999999999999999999999999999 777788888888777777 8888877

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.02  E-value=6.6e-10  Score=88.87  Aligned_cols=62  Identities=21%  Similarity=0.384  Sum_probs=55.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|++++.++..+++++. +.+ +..+++|
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D   84 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNK-VHAIQCD   84 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSC-EEEEECC
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCc-eEEEEeC
Confidence            4578999999999999999999999999999999999998888888888766 666 8888887

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.01  E-value=7.1e-10  Score=87.87  Aligned_cols=61  Identities=23%  Similarity=0.484  Sum_probs=55.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||++++++|+++|++|++++|++++.++..+++++.+.+ +..+++|
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   91 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVH-SKAYKCN   91 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSC-EEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-ceEEEee
Confidence            578999999999999999999999999999999999998888888887776777 8888887

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.01  E-value=3.1e-10  Score=90.53  Aligned_cols=54  Identities=22%  Similarity=0.496  Sum_probs=46.5

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +|+++||||++|||+++|++|+++|++|+++||+++++++    +.+++.+ +..+++|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~----~~~~~~~-~~~~~~D   55 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSAD----FAKERPN-LFYFHGD   55 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHTTCTT-EEEEECC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHhcCC-EEEEEec
Confidence            5899999999999999999999999999999998765544    4445667 8888887

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.01  E-value=5.8e-10  Score=88.99  Aligned_cols=62  Identities=29%  Similarity=0.468  Sum_probs=53.8

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc-HHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG-NNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~-~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++ .+++.+++++.+.+ +..+++|
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   87 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD-AACVKAN   87 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCC-eEEEEcC
Confidence            35789999999999999999999999999999999998754 56677788777777 8888887

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.01  E-value=6.1e-10  Score=88.96  Aligned_cols=63  Identities=29%  Similarity=0.491  Sum_probs=56.4

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..++++|+++||||++|||+++|++|+++|++|++.+|++++.+++.+++++.+.+ +..+++|
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D  101 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE-SSGYAGD  101 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCC-EEEEECC
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCc-eeEEECC
Confidence            45678999999999999999999999999999999999988888888888877777 8888887

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.01  E-value=5.5e-10  Score=87.76  Aligned_cols=60  Identities=23%  Similarity=0.386  Sum_probs=51.1

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.+++||+++||||++|||+++|++|+++|++|++++|+++.+++..+++..   + +..+++|
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~-~~~~~~D   63 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---N-GKGMALN   63 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---G-EEEEECC
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---c-ceEEEEe
Confidence            5678899999999999999999999999999999999998888887776643   3 4566665

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.00  E-value=6.8e-10  Score=88.86  Aligned_cols=59  Identities=25%  Similarity=0.441  Sum_probs=51.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++++|+++||||++|||+++|++|+++|++|++++|+++.+++..+++   +.+ +..+++|
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   81 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSK-AFGVRVD   81 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTT-EEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc-eEEEEec
Confidence            5678999999999999999999999999999999999988777776654   556 7788877

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.00  E-value=1.1e-09  Score=84.91  Aligned_cols=61  Identities=18%  Similarity=0.321  Sum_probs=54.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEE-cCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCW-DIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~-~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||++++++|+++|++|+++ +|+++..++..+++++.+.+ +..+++|
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   63 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGIN-VVVAKGD   63 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCC-EEEEESC
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCc-EEEEECC
Confidence            3678999999999999999999999999999998 67888888888888877777 8888887

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.00  E-value=4.7e-10  Score=87.60  Aligned_cols=56  Identities=20%  Similarity=0.251  Sum_probs=48.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.   .+ +.++++|
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~-~~~~~~D   57 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---NA-VIGIVAD   57 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GG-EEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---CC-ceEEECC
Confidence            57899999999999999999999999999999999988888877762   24 6777776

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.00  E-value=5.8e-10  Score=87.79  Aligned_cols=58  Identities=19%  Similarity=0.366  Sum_probs=52.7

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc--HHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG--NNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~--~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +|+++||||++|||+++|++|+++|++|++++|++++  +++..+++++.+.+ +.++++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D   61 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQK-AVFVGLD   61 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCC-EEEEECC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCc-EEEEEcc
Confidence            6899999999999999999999999999999999887  78888888777777 8888887

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.00  E-value=8.3e-10  Score=86.74  Aligned_cols=62  Identities=29%  Similarity=0.380  Sum_probs=55.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||++++++|+++|++|++.+| ++++.++..+++++.+.+ +..+++|
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~-~~~~~~D   79 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ-GVAIQAD   79 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEEec
Confidence            4678999999999999999999999999999999999 777788888888877777 8888887

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=98.99  E-value=9.9e-10  Score=85.68  Aligned_cols=61  Identities=25%  Similarity=0.393  Sum_probs=54.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEE-cCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCW-DIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~-~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++|+++||||++|||+++|++|+++|++|++. +++.++.++..+++++.+.+ +..+++|
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   65 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGS-AFSIGAN   65 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCc-eEEEecC
Confidence            4679999999999999999999999999999885 77888888999999888877 8888876

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=98.99  E-value=6.6e-10  Score=86.99  Aligned_cols=64  Identities=13%  Similarity=0.178  Sum_probs=52.6

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEc-CCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWD-IDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~-r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +..+.++|+++||||++|||+++|++|+++|++|++.+ ++.++.++..+++++.+.+ +..+++|
T Consensus         7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   71 (256)
T 3ezl_A            7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFD-FYASEGN   71 (256)
T ss_dssp             ------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCC-CEEEECC
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCe-eEEEecC
Confidence            34567899999999999999999999999999999887 7778888888888888877 8888887

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=98.99  E-value=6.9e-10  Score=88.59  Aligned_cols=61  Identities=25%  Similarity=0.346  Sum_probs=54.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC-CeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY-KNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~-~~v~~~~~D  159 (159)
                      ++++|+++||||++|||++++++|+++|++|++++|+++++++..+++++.+. + +..+++|
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   86 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS-AHYIAGT   86 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSE-EEEEECC
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCc-eEEEeCC
Confidence            47899999999999999999999999999999999999988888888877765 5 7788877

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=98.99  E-value=9.8e-10  Score=87.65  Aligned_cols=64  Identities=17%  Similarity=0.110  Sum_probs=51.9

Q ss_pred             CCCCCCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          93 PPSEKSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        93 ~~~~~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +..|.++++|+++||||+  +|||+++|++|+++|++|++++|+.  .++..+++.+.+.+ +.++++|
T Consensus        18 ~~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~-~~~~~~D   83 (280)
T 3nrc_A           18 GSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNP-AAVLPCD   83 (280)
T ss_dssp             ----CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCC-SEEEECC
T ss_pred             CCcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCC-ceEEEee
Confidence            456778899999999988  8899999999999999999999987  45666777666666 7788887

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=98.98  E-value=6.3e-10  Score=89.05  Aligned_cols=58  Identities=26%  Similarity=0.409  Sum_probs=49.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..++   .+.+ +..+++|
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~---~~~~-~~~~~~D   59 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---HGGN-AVGVVGD   59 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---TBTT-EEEEECC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH---cCCc-EEEEEcC
Confidence            46899999999999999999999999999999999998777666554   3556 7888877

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=98.98  E-value=1.1e-09  Score=86.12  Aligned_cols=58  Identities=21%  Similarity=0.324  Sum_probs=50.7

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++|+++||||++|||+++|++|+++|++|++++|+++  ++..+++++.+.+ +..+++|
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~-~~~~~~D   59 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVK-AVHHPAD   59 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCC-EEEECCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCc-eEEEeCC
Confidence            57899999999999999999999999999999999876  6667777766777 7888777

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=98.98  E-value=1.2e-09  Score=87.54  Aligned_cols=62  Identities=16%  Similarity=0.318  Sum_probs=55.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH-----cCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE-----QGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~-----~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++++     .+.+ +..+++|
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~D   80 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQAR-VIPIQCN   80 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCC-EEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCcc-EEEEecC
Confidence            467899999999999999999999999999999999999888888888876     3556 8888887

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=98.98  E-value=4.8e-10  Score=87.79  Aligned_cols=61  Identities=28%  Similarity=0.503  Sum_probs=49.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC-------CCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG-------YKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g-------~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||++++++|+++|++|++++|++++.++..+++++.+       .+ +..+++|
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   71 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN-HAAFQAD   71 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------C-CEEEECC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcc-eEEEEec
Confidence            4678999999999999999999999999999999999888887777766554       45 6777776

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=98.98  E-value=1.5e-09  Score=84.98  Aligned_cols=59  Identities=22%  Similarity=0.400  Sum_probs=51.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++   +.+ +.++++|
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   66 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNN-CVFAPAD   66 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTT-EEEEECC
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCc-eEEEEcC
Confidence            4678999999999999999999999999999999999998888777665   556 7777776

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=98.98  E-value=9.4e-10  Score=86.98  Aligned_cols=62  Identities=24%  Similarity=0.361  Sum_probs=53.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEE-EcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVC-WDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi-~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++ .+|+.+..++..+++++.+.+ +.++++|
T Consensus        22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   84 (267)
T 4iiu_A           22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGN-GRLLSFD   84 (267)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCc-eEEEEec
Confidence            3567899999999999999999999999999966 567778888889999888888 8888887

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=98.97  E-value=1.4e-09  Score=85.37  Aligned_cols=64  Identities=17%  Similarity=0.127  Sum_probs=51.1

Q ss_pred             CCCCCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          94 PSEKSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        94 ~~~~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++..++++|+++||||+  +|||+++|++|+++|++|++++|++. .++..+++.+.+++ +.++++|
T Consensus         7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~-~~~~~~D   72 (271)
T 3ek2_A            7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGS-ELVFPCD   72 (271)
T ss_dssp             --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTC-CCEEECC
T ss_pred             CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchh-hHHHHHHHHHHcCC-cEEEECC
Confidence            44567889999999998  99999999999999999999999854 44555566555556 7777877

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=98.97  E-value=9.9e-10  Score=86.30  Aligned_cols=58  Identities=24%  Similarity=0.433  Sum_probs=50.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++   +.+ +..+++|
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   60 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GER-SMFVRHD   60 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTT-EEEECCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCc-eEEEEcc
Confidence            467999999999999999999999999999999999988777776665   556 7777776

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=98.97  E-value=1.2e-09  Score=84.58  Aligned_cols=61  Identities=23%  Similarity=0.413  Sum_probs=53.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH-cCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE-QGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~-~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||++++++|+++|++|++++|++++.++..+++++ .+.+ +..+++|
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   65 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVK-AHGVEMN   65 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCC-EEEEECC
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCc-eEEEEcc
Confidence            46789999999999999999999999999999999998888888887766 4666 7788776

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=98.97  E-value=1.3e-09  Score=85.44  Aligned_cols=58  Identities=24%  Similarity=0.441  Sum_probs=49.1

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|+++|++|++++|++ +++++   ++++.+.+ +..+++|
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~-~~~~~~D   62 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRR-VLTVKCD   62 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCC-EEEEECC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCc-EEEEEee
Confidence            46789999999999999999999999999999999987 55544   45555667 8888887

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.97  E-value=5.2e-10  Score=88.83  Aligned_cols=59  Identities=31%  Similarity=0.386  Sum_probs=49.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++   +.+ +..+++|
T Consensus         2 ~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   60 (263)
T 2a4k_A            2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAE-AIAVVAD   60 (263)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSS-EEEEECC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCc-eEEEEcC
Confidence            4578999999999999999999999999999999999987777665544   245 7777776

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=98.95  E-value=2.5e-09  Score=84.21  Aligned_cols=62  Identities=16%  Similarity=0.174  Sum_probs=50.7

Q ss_pred             CCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC-CeEEEEecC
Q psy2040          97 KSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY-KNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~-~~v~~~~~D  159 (159)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+++..+...+..++.+. + +.++++|
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   67 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRND-SIILPCD   67 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCC-CEEEECC
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCC-ceEEeCC
Confidence            35789999999999  7799999999999999999999987655555555555454 5 7888887

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=98.95  E-value=8.8e-10  Score=87.78  Aligned_cols=54  Identities=26%  Similarity=0.463  Sum_probs=45.1

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++||+++|||+++|||+++|++|+++|++|++++|+++.+++.      .+.+ +..+++|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~------~~~~-~~~~~~D   62 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP------RHPR-IRREELD   62 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC------CCTT-EEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh------hcCC-eEEEEec
Confidence            5899999999999999999999999999999999998765431      2345 6666666

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=98.94  E-value=6.3e-10  Score=89.65  Aligned_cols=61  Identities=23%  Similarity=0.377  Sum_probs=55.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC---EEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV---TLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga---~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|+   +|++++|++++++++.+++++.  +.+ +.++++|
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~D   95 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAK-VHVAQLD   95 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCE-EEEEECC
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCe-EEEEECC
Confidence            46799999999999999999999999998   9999999999999999999876  556 8888887

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=98.94  E-value=1.1e-09  Score=86.81  Aligned_cols=62  Identities=10%  Similarity=0.184  Sum_probs=51.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEc-CCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWD-IDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~-r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..+.+|+++||||++|||+++|++|+++|++|++.+ ++.+..++..+++++.+.+ +.++++|
T Consensus        21 ~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   83 (269)
T 3gk3_A           21 SMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRD-FKAYAVD   83 (269)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCC-CEEEECC
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCc-eEEEEec
Confidence            346799999999999999999999999999999998 5556667777777777777 8888887

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=98.94  E-value=1.4e-09  Score=84.91  Aligned_cols=59  Identities=19%  Similarity=0.252  Sum_probs=53.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHH-CCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQ-HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~-~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++|+++||||++|||++++++|++ +|++|++++|+.++.++..++++..+.+ +.++++|
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   62 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLS-PRFHQLD   62 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCC-CEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCe-eEEEECC
Confidence            579999999999999999999999 9999999999988888888888877777 7888877

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=98.94  E-value=1.6e-09  Score=84.34  Aligned_cols=60  Identities=27%  Similarity=0.404  Sum_probs=50.3

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeE-EEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNI-HTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v-~~~~~D  159 (159)
                      +.++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++   +.+ + ..+++|
T Consensus         6 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~~D   66 (254)
T 2wsb_A            6 VFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAA-VAARIVAD   66 (254)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGG-EEEEEECC
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---ccc-ceeEEEEe
Confidence            45678999999999999999999999999999999999988777776665   334 5 666666

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=98.94  E-value=1.5e-09  Score=86.76  Aligned_cols=60  Identities=18%  Similarity=0.278  Sum_probs=50.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++ |+++||||++|||+++|++|+++|++|++++|++++++++.+++++. .+ +..+++|
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~D   77 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TR-VLPLTLD   77 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SC-EEEEECC
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-Cc-EEEEEcC
Confidence            3456 89999999999999999999999999999999998888888877544 45 7788877

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=98.94  E-value=1.2e-09  Score=84.92  Aligned_cols=61  Identities=18%  Similarity=0.379  Sum_probs=51.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||++++++|+++|++|++++|+++..++..++++.. .+ +..+++|
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~D   62 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQ-IQFFQHD   62 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TT-EEEEECC
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-Cc-eEEEECC
Confidence            3578999999999999999999999999999999999988777776666432 45 7777776

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=98.93  E-value=2e-09  Score=85.54  Aligned_cols=61  Identities=16%  Similarity=0.189  Sum_probs=50.0

Q ss_pred             CCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||+  +|||+++|++|+++|++|++++|+++ .++..+++.+..++ +..+++|
T Consensus         2 ~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~-~~~~~~D   64 (275)
T 2pd4_A            2 GFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNS-PYVYELD   64 (275)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTC-CCEEECC
T ss_pred             CCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCC-cEEEEcC
Confidence            35779999999999  99999999999999999999999886 56666666655444 5666766

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=98.93  E-value=9.3e-10  Score=86.62  Aligned_cols=58  Identities=26%  Similarity=0.385  Sum_probs=48.9

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++|||+++|||+++|++|+++|++|++++|+++++++..+++   +.+ +..+++|
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   59 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDA-ARYQHLD   59 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGG-EEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc-eeEEEec
Confidence            467899999999999999999999999999999999987777666554   445 6677766

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=98.93  E-value=1.8e-09  Score=84.13  Aligned_cols=62  Identities=19%  Similarity=0.223  Sum_probs=50.9

Q ss_pred             CCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ....+.++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.   .+ +..+.+|
T Consensus         7 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~-~~~~~~D   68 (249)
T 3f9i_A            7 HHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DN-YTIEVCN   68 (249)
T ss_dssp             --CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---SS-EEEEECC
T ss_pred             cccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---cC-ccEEEcC
Confidence            44567889999999999999999999999999999999999888887776653   34 5666665

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=98.93  E-value=1.7e-09  Score=84.53  Aligned_cols=62  Identities=18%  Similarity=0.304  Sum_probs=52.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+. +.+ +.++++|
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D   72 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK-TKAYQCD   72 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCC-EEEEECC
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCe-eEEEEee
Confidence            4578999999999999999999999999999999999877777666666543 566 7888887

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=98.92  E-value=1.9e-09  Score=85.43  Aligned_cols=59  Identities=14%  Similarity=0.249  Sum_probs=53.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEE-cCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCW-DIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~-~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++|+++||||++|||+++|++|+++|++|++. +|+.+..+++.+++++.+.+ +..+++|
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   84 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGE-AVAIPGD   84 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCc-EEEEEcC
Confidence            57999999999999999999999999999886 77888888888888888887 8888887

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=98.92  E-value=1.3e-09  Score=86.06  Aligned_cols=60  Identities=27%  Similarity=0.385  Sum_probs=51.7

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D  159 (159)
                      +++|+++||||++|||++++++|+++|++|++++|++++.++..+++++.  +.+ +..+++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~D   66 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQK-TLFIQCD   66 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGG-EEEEECC
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCc-eEEEecC
Confidence            57899999999999999999999999999999999988888777777553  345 7777777

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=98.90  E-value=1.6e-09  Score=84.13  Aligned_cols=58  Identities=19%  Similarity=0.318  Sum_probs=50.4

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH-HHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML-EEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei-~~~g~~~v~~~~~D  159 (159)
                      +|+++||||++|||++++++|+++|++|++++|++++.++..+++ ++.+.+ +..+++|
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   60 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADK-VLRVRAD   60 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGG-EEEEECC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCc-EEEEEec
Confidence            689999999999999999999999999999999988888877777 444556 7788777

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=98.90  E-value=2e-09  Score=84.77  Aligned_cols=62  Identities=23%  Similarity=0.327  Sum_probs=51.4

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++... .+ +.++++|
T Consensus        11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~D   72 (278)
T 2bgk_A           11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DV-ISFVHCD   72 (278)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TT-EEEEECC
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC-Cc-eEEEECC
Confidence            34678999999999999999999999999999999999887777766666322 25 7777776

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=98.90  E-value=5.1e-09  Score=84.40  Aligned_cols=63  Identities=16%  Similarity=0.168  Sum_probs=50.2

Q ss_pred             CCCCCCCCeEEEeCCCC--CchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~--GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+.+++||+++||||++  |||+++|++|+++|++|++++|+++..++..+..++.+ + +.++++|
T Consensus        24 ~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~D   88 (296)
T 3k31_A           24 TGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG-V-KLTVPCD   88 (296)
T ss_dssp             CCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT-C-CEEEECC
T ss_pred             chhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-C-eEEEEcC
Confidence            34568899999999986  99999999999999999999999766555544444433 4 5777777

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=98.90  E-value=1.3e-09  Score=85.90  Aligned_cols=60  Identities=22%  Similarity=0.265  Sum_probs=48.6

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.++++|+++||||++|||+++|++|+++|++|++++|++++.++..+++++   + +..+++|
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~-~~~~~~D   66 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN---G-GFAVEVD   66 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT---C-CEEEECC
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---C-CeEEEEe
Confidence            3457899999999999999999999999999999999998776666554422   3 5566665

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=98.89  E-value=3.4e-09  Score=85.44  Aligned_cols=63  Identities=16%  Similarity=0.058  Sum_probs=49.0

Q ss_pred             CCCCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+.+++||+++||||+  +|||+++|++|+++|++|++++|+++. ++..+++.+.+++ +.++++|
T Consensus        25 ~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~-~~~~~~D   89 (293)
T 3grk_A           25 QSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-KKRVEPLAEELGA-FVAGHCD   89 (293)
T ss_dssp             --CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHHHHHHTC-EEEEECC
T ss_pred             ccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHhcCC-ceEEECC
Confidence            3456889999999999  569999999999999999999998543 3444455444456 7888887

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=98.89  E-value=2.6e-09  Score=82.65  Aligned_cols=58  Identities=21%  Similarity=0.399  Sum_probs=51.5

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEE-EcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVC-WDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi-~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ||+++||||++|||++++++|+++|++|++ .+|++++.+++.+++++.+.+ +..+++|
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   59 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQ-AITFGGD   59 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCE-EEEEECC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc-EEEEeCC
Confidence            589999999999999999999999999998 589888888888888777777 8888887

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=98.88  E-value=2.3e-09  Score=85.03  Aligned_cols=45  Identities=22%  Similarity=0.301  Sum_probs=36.7

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .++++++|+++||||++|||+++|++|+++|++|++++|++++..
T Consensus        21 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~   65 (260)
T 3gem_A           21 GHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV   65 (260)
T ss_dssp             ------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH
T ss_pred             cCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH
Confidence            345688999999999999999999999999999999999987653

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=98.88  E-value=4.3e-09  Score=83.06  Aligned_cols=60  Identities=17%  Similarity=0.093  Sum_probs=48.9

Q ss_pred             CCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||+  +|||+++|++|+++|++|++++|++ +.++..+++.+..++ ..++++|
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~-~~~~~~D   67 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGS-DIVLQCD   67 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTC-CCEEECC
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCC-cEEEEcc
Confidence            4789999999999  9999999999999999999999987 556666666655444 4566666

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=98.87  E-value=2.8e-09  Score=84.25  Aligned_cols=58  Identities=19%  Similarity=0.332  Sum_probs=48.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++.++..++++.   + +..+++|
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~-~~~~~~D   61 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---A-ARYVHLD   61 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---G-EEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---C-ceEEEec
Confidence            46799999999999999999999999999999999998777776665532   3 5666666

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=98.87  E-value=4.1e-09  Score=82.91  Aligned_cols=62  Identities=27%  Similarity=0.423  Sum_probs=52.7

Q ss_pred             CCCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccH-HHHHHHHHHc-CCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGN-NETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~-~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      .++++|+++||||+  +|||+++|++|+++|++|++++++.+.. ++..+++++. +.+ +.++++|
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~D   81 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIK-AKAYKCQ   81 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCC-EECCBCC
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCc-eeEEecC
Confidence            35789999999999  9999999999999999999999887665 7777777654 666 8888877

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=98.87  E-value=2.3e-09  Score=83.08  Aligned_cols=58  Identities=28%  Similarity=0.368  Sum_probs=52.4

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCC-------EEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKV-------TLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga-------~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +|+++||||++|||++++++|+++|+       +|++.+|++++.+++.+++++.+.+ +.++++|
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D   66 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL-TDTITAD   66 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCE-EEEEECC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCe-eeEEEec
Confidence            68999999999999999999999999       9999999988888888888776777 8888887

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=98.85  E-value=4e-09  Score=86.46  Aligned_cols=61  Identities=20%  Similarity=0.266  Sum_probs=49.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC-----CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-----EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~-----~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|+++|++|++.+|+     +++++++.++++..+.+ +..+++|
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~-~~~~~~D   67 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVD-LRTLELD   67 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCC-EEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCc-EEEEEee
Confidence            3568999999999999999999999999999987765     44566666667767777 8888887

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=98.85  E-value=2.6e-09  Score=85.54  Aligned_cols=41  Identities=17%  Similarity=0.221  Sum_probs=37.6

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      +++++||+++||||++|||+++|++|+++|++|++++|+++
T Consensus         6 l~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~   46 (261)
T 4h15_A            6 FLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARP   46 (261)
T ss_dssp             CCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             ccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCch
Confidence            35789999999999999999999999999999999999643

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=98.85  E-value=6e-09  Score=83.15  Aligned_cols=60  Identities=22%  Similarity=0.157  Sum_probs=49.3

Q ss_pred             CCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+++ .++..+++.+..++ +..+++|
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~-~~~~~~D   79 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGS-DLVVKCD   79 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTC-CCEEECC
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCC-eEEEEcC
Confidence            4789999999999  99999999999999999999999875 55566666654444 5566766

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=98.84  E-value=4.4e-09  Score=81.25  Aligned_cols=58  Identities=21%  Similarity=0.322  Sum_probs=50.8

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEE-cCCCccHHHHHHHHHHcCCCeEEE-EecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCW-DIDEKGNNETKQMLEEQGYKNIHT-YKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~-~r~~~~~~~~~~ei~~~g~~~v~~-~~~D  159 (159)
                      +|+++||||++|||++++++|+++|++|++. +|++++.++..+++++.+.+ +.. +++|
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D   60 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSP-LVAVLGAN   60 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCS-CEEEEECC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc-eEEEEecc
Confidence            4789999999999999999999999999998 89988888888888877766 666 7776

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=98.84  E-value=5.7e-09  Score=81.86  Aligned_cols=63  Identities=21%  Similarity=0.255  Sum_probs=49.9

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCC---CEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHK---VTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~G---a~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +..++++|+++||||++|||+++|++|+++|   ++|++++|+.++.+++ +++.+.+.+ +.++.+|
T Consensus        15 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~-~~~~~~D   80 (267)
T 1sny_A           15 VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSN-IHILEID   80 (267)
T ss_dssp             -----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTT-EEEEECC
T ss_pred             cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCc-eEEEEec
Confidence            3456789999999999999999999999999   9999999998776654 455555667 8888887

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=98.84  E-value=4.9e-09  Score=83.19  Aligned_cols=57  Identities=18%  Similarity=0.206  Sum_probs=48.2

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++.++..++.   +.+ +..+++|
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   59 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PDR-AEAISLD   59 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TTT-EEEEECC
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCC-ceEEEee
Confidence            46899999999999999999999999999999999988877765543   455 7777776

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.83  E-value=6.1e-09  Score=81.90  Aligned_cols=49  Identities=27%  Similarity=0.519  Sum_probs=42.1

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      |.++++|+++||||++|||+++|++|+++|++|++++|++++ ++..+++
T Consensus         1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~   49 (256)
T 2d1y_A            1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI   49 (256)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh
Confidence            345789999999999999999999999999999999998876 6555554

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=98.82  E-value=1.8e-09  Score=84.33  Aligned_cols=57  Identities=30%  Similarity=0.427  Sum_probs=45.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||++++++|+++|++|++++|++++++++. ++    .+ +..+++|
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~-~~~~~~D   58 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PG-IQTRVLD   58 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TT-EEEEECC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cC-ceEEEee
Confidence            4578999999999999999999999999999999999876554433 22    13 5566655

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=98.82  E-value=9e-09  Score=81.12  Aligned_cols=60  Identities=15%  Similarity=0.170  Sum_probs=49.2

Q ss_pred             CCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||+  +|||+++|++|+++|++|++++|+++ .++..+++.+..+. +..+++|
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~-~~~~~~D   66 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGG-ALLFRAD   66 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTC-CEEEECC
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCC-cEEEECC
Confidence            4678999999999  99999999999999999999999875 55556666554444 6677776

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=98.82  E-value=4.5e-09  Score=83.56  Aligned_cols=58  Identities=28%  Similarity=0.445  Sum_probs=47.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|++++.+++.+++    .+ +..+++|
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~D   62 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PG-AVFILCD   62 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TT-EEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cC-CeEEEcC
Confidence            4578999999999999999999999999999999999987766655543    23 5566665

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.82  E-value=4.4e-09  Score=82.32  Aligned_cols=47  Identities=34%  Similarity=0.545  Sum_probs=41.1

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM  144 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~e  144 (159)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~   48 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA   48 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            36789999999999999999999999999999999988766655443

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=98.80  E-value=4.6e-09  Score=82.51  Aligned_cols=60  Identities=8%  Similarity=0.160  Sum_probs=48.1

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc-HHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG-NNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~-~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.+|+++||||++|||+++|++|+++|++|++++++.+. .++..+++++.+.+ +.++++|
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   65 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEER-LQFVQAD   65 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGG-EEEEECC
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCc-eEEEEec
Confidence            457999999999999999999999999999998776544 45555555555666 8888887

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=98.80  E-value=2.4e-09  Score=82.73  Aligned_cols=54  Identities=24%  Similarity=0.306  Sum_probs=45.2

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |+++||||++|||+++|++|+++|++|++++|+++++++..+++   +.+ +..+++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   55 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNN-VGYRARD   55 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSC-CCEEECC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhc-cCeEeec
Confidence            68999999999999999999999999999999988877776655   444 5666665

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=98.80  E-value=9.8e-09  Score=80.29  Aligned_cols=59  Identities=19%  Similarity=0.251  Sum_probs=46.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|+++|++ |++++|+++.  +..+++++.  +.+ +.++++|
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~-~~~~~~D   63 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVN-ITFHTYD   63 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSE-EEEEECC
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCce-EEEEEEe
Confidence            467899999999999999999999999996 9999998742  233444443  345 7777777

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=98.79  E-value=1.1e-08  Score=80.36  Aligned_cols=54  Identities=24%  Similarity=0.376  Sum_probs=46.7

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |+++||||++|||+++|++|+++|++|++++|++++++++.+++   +.+ +..+++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   54 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDN-LYIAQLD   54 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTT-EEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCc-eEEEEcC
Confidence            57999999999999999999999999999999988777776665   345 7777776

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=98.79  E-value=9.5e-09  Score=87.76  Aligned_cols=59  Identities=12%  Similarity=0.116  Sum_probs=50.7

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHH-CCCEEEEEcCCCccHH------------HHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQ-HKVTLVCWDIDEKGNN------------ETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~-~Ga~Vvi~~r~~~~~~------------~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+|+++||||++|||+++|++|++ +|++|++++|+.+..+            ++.+++++.|.+ +..+++|
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~-a~~i~~D  131 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLY-SKSINGD  131 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCC-EEEEESC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCc-EEEEEec
Confidence            589999999999999999999999 9999999999765433            345677778888 8899887

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.78  E-value=9.6e-09  Score=91.01  Aligned_cols=60  Identities=28%  Similarity=0.464  Sum_probs=51.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++||+++|||+++|||+++|++|+++|++|++.+++  ..+++++++++.|++ +..+++|
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~g~~-~~~~~~D  377 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAGGE-AWPDQHD  377 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHTTCE-EEEECCC
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhcCCe-EEEEEcC
Confidence            35789999999999999999999999999999999873  357778888877777 8877776

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=98.78  E-value=6.3e-09  Score=81.75  Aligned_cols=56  Identities=16%  Similarity=0.303  Sum_probs=41.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+   +..++   .+.+ +.++++|
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~---~~~~-~~~~~~D   60 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE---DVVAD---LGDR-ARFAAAD   60 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCH---HHHHH---TCTT-EEEEECC
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchH---HHHHh---cCCc-eEEEECC
Confidence            4678999999999999999999999999999999999543   22222   2555 7777776

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=98.77  E-value=8.1e-09  Score=79.96  Aligned_cols=49  Identities=24%  Similarity=0.328  Sum_probs=42.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      +++++|+++|||+++|||++++++|+++|++|++++|++++.++..+++
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   51 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC   51 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999987766655543

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=98.77  E-value=7.3e-09  Score=81.99  Aligned_cols=59  Identities=20%  Similarity=0.204  Sum_probs=46.2

Q ss_pred             CCCCCCeEEEeCC--CCCchHHHHHHHHHCCCEEEEEcCCCcc-HHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGA--GNGIGRELAKQFVQHKVTLVCWDIDEKG-NNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~--s~GIG~~ia~~la~~Ga~Vvi~~r~~~~-~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++++|+++|||+  ++|||+++|++|+++|++|++++|++++ .+++.+++   +.+ +.++++|
T Consensus         3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~-~~~~~~D   64 (269)
T 2h7i_A            3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---PAK-APLLELD   64 (269)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---SSC-CCEEECC
T ss_pred             cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---CCC-ceEEEcc
Confidence            3578999999999  9999999999999999999999998754 24433322   444 6666666

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=98.76  E-value=1e-08  Score=90.84  Aligned_cols=60  Identities=23%  Similarity=0.443  Sum_probs=47.5

Q ss_pred             CCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC---------CCccHHHHHHHHHHcCCCeEE
Q psy2040          94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI---------DEKGNNETKQMLEEQGYKNIH  154 (159)
Q Consensus        94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r---------~~~~~~~~~~ei~~~g~~~v~  154 (159)
                      .+..+++||+++||||++|||+++|++|+++|++|++++|         +.+.++++.+++++.+.. +.
T Consensus        12 ~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~   80 (613)
T 3oml_A           12 DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-AV   80 (613)
T ss_dssp             ---CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC-EE
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe-EE
Confidence            4456789999999999999999999999999999999988         777888999999887766 44

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.74  E-value=1.7e-08  Score=89.48  Aligned_cols=57  Identities=19%  Similarity=0.402  Sum_probs=48.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC---------ccHHHHHHHHHHcCCCeEEE
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE---------KGNNETKQMLEEQGYKNIHT  155 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~---------~~~~~~~~ei~~~g~~~v~~  155 (159)
                      +++||+++|||+++|||+++|++|+++|++|++++++.         +.++++++++++.|++ +..
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~   70 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVA   70 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE-EEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEE
Confidence            57899999999999999999999999999999998865         6678888888877765 543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=98.73  E-value=1.6e-08  Score=78.19  Aligned_cols=47  Identities=26%  Similarity=0.342  Sum_probs=41.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .++++|+++||||++|||++++++|+++|++|++++|++++.++..+
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~   49 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK   49 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            35788999999999999999999999999999999998876665544

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=98.72  E-value=1.1e-08  Score=78.83  Aligned_cols=55  Identities=24%  Similarity=0.218  Sum_probs=44.7

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+|+++||||++|||++++++|+++|++|++++|+++++++..++++    + +..+++|
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~-~~~~~~D   58 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----G-ALPLPGD   58 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----T-CEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----h-ceEEEec
Confidence            47899999999999999999999999999999998877666555432    3 4555555

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=98.72  E-value=4.7e-09  Score=83.48  Aligned_cols=42  Identities=21%  Similarity=0.386  Sum_probs=36.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      ++.+|+++||||++|||+++|++|+++|++|++++|++++++
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~   54 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLK   54 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            467899999999999999999999999999999999865443

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=98.72  E-value=1.4e-08  Score=80.79  Aligned_cols=43  Identities=23%  Similarity=0.448  Sum_probs=36.8

Q ss_pred             CCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ++..+.+||+++||||++|||+++|++|+++|++|++++|+++
T Consensus         7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~   49 (269)
T 3vtz_A            7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEK   49 (269)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC-
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            4456788999999999999999999999999999999988754

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.72  E-value=1.4e-08  Score=78.30  Aligned_cols=57  Identities=25%  Similarity=0.411  Sum_probs=46.8

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHK--VTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++|+++||||++|||++++++|+++|  ++|++++|+.++.+++.+.   .+.+ +.++++|
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~---~~~~-~~~~~~D   59 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSR-VHVLPLT   59 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CCTT-EEEEECC
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc---cCCc-eEEEEee
Confidence            357899999999999999999999999  9999999998776654322   2555 7777776

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=98.72  E-value=1.9e-08  Score=77.55  Aligned_cols=49  Identities=18%  Similarity=0.234  Sum_probs=38.8

Q ss_pred             CCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040          94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .++.++++|+++||||+++||++++++|+++|++|++++|++++.++..
T Consensus        14 ~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~   62 (236)
T 3e8x_A           14 RENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR   62 (236)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH
T ss_pred             ccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH
Confidence            4456788999999999999999999999999999999999988766543

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=98.69  E-value=1.6e-08  Score=79.41  Aligned_cols=55  Identities=20%  Similarity=0.319  Sum_probs=46.9

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHK--VTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ||+++||||++|||+++|++|+++|  ++|++.+|++++++++.+++   +.+ +.++++|
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   58 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDR-FFYVVGD   58 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGG-EEEEESC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCc-eEEEECC
Confidence            7899999999999999999999985  78989999988877776655   455 7788877

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=98.69  E-value=3.7e-08  Score=83.71  Aligned_cols=60  Identities=12%  Similarity=0.124  Sum_probs=50.2

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHH-CCCEEEEEcCCCccH------------HHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQ-HKVTLVCWDIDEKGN------------NETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~-~Ga~Vvi~~r~~~~~------------~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      -.+|+++||||++|||+++|++|++ +|++|++++++.+..            +...+++++.|.+ +..+++|
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~-a~~i~~D  117 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLY-AKSINGD  117 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCC-EEEEESC
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCc-eEEEECC
Confidence            4689999999999999999999999 999999999876543            2345567777888 8888887

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=98.69  E-value=4.8e-09  Score=83.07  Aligned_cols=41  Identities=22%  Similarity=0.379  Sum_probs=37.2

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      |+++++|+++||||++|||+++|++|+++|++|++++|+.+
T Consensus        23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~   63 (260)
T 3un1_A           23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK   63 (260)
T ss_dssp             HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence            44578999999999999999999999999999999998754

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=98.68  E-value=2.5e-08  Score=78.29  Aligned_cols=49  Identities=18%  Similarity=0.149  Sum_probs=42.6

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK  151 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~  151 (159)
                      |+++||||++|||+++|++|+++|++|++++|++++.++..+ +++.+.+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~   50 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQ   50 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTT
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCc
Confidence            689999999999999999999999999999999888777655 6555544

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=98.68  E-value=2.6e-08  Score=78.90  Aligned_cols=40  Identities=30%  Similarity=0.620  Sum_probs=36.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .++++|+++||||++|||+++|++|+++|++|++++|+++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   43 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP   43 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcc
Confidence            4578999999999999999999999999999999988653

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=98.68  E-value=3.8e-08  Score=80.41  Aligned_cols=55  Identities=27%  Similarity=0.545  Sum_probs=46.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC---------CCccHHHHHHHHHHcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI---------DEKGNNETKQMLEEQGYK  151 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r---------~~~~~~~~~~ei~~~g~~  151 (159)
                      .+++||+++|||+++|||+++|++|+++|++|++.++         +.++++++.+++++.+..
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~   68 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK   68 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe
Confidence            3578999999999999999999999999999999754         566777888888766654

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.66  E-value=2.8e-08  Score=77.98  Aligned_cols=41  Identities=24%  Similarity=0.348  Sum_probs=36.6

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      ....+++|+++||||++|||+++|++|+++|++|++++|++
T Consensus        13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~   53 (249)
T 1o5i_A           13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE   53 (249)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            34568899999999999999999999999999999999986

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=98.65  E-value=5.2e-08  Score=83.05  Aligned_cols=60  Identities=15%  Similarity=0.243  Sum_probs=50.8

Q ss_pred             CCCCeEEEeCCCCCchHH--HHHHHHHCCCEEEEEcCCCcc------------HHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRE--LAKQFVQHKVTLVCWDIDEKG------------NNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~--ia~~la~~Ga~Vvi~~r~~~~------------~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..||+++||||++|||++  +|++++++|++|++++|+.+.            .+++.+++++.|.+ +..+++|
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~D  131 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLV-AKNFIED  131 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCC-EEEEESC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCc-EEEEEee
Confidence            579999999999999999  999999999999999987543            35555666777887 8888887

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=98.64  E-value=2.1e-08  Score=79.72  Aligned_cols=43  Identities=26%  Similarity=0.386  Sum_probs=35.9

Q ss_pred             CCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      +.|.+++||+++||||++|||+++|++|+++|++|++++|+.+
T Consensus        21 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~   63 (266)
T 3uxy_A           21 QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVA   63 (266)
T ss_dssp             -----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCT
T ss_pred             hhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            4466789999999999999999999999999999999998743

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=98.61  E-value=3.6e-08  Score=76.73  Aligned_cols=55  Identities=18%  Similarity=0.256  Sum_probs=41.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|++|++ |++|++++|++++.++..+     ..+ +..+++|
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~-~~~~~~D   56 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEG-VEPIESD   56 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STT-EEEEECC
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcC-Ccceecc
Confidence            46789999999999999999999998 9999999998876665543     123 5555554

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.58  E-value=8.3e-08  Score=97.33  Aligned_cols=62  Identities=13%  Similarity=0.161  Sum_probs=54.1

Q ss_pred             CCCCCCeEEEeCCCCC-chHHHHHHHHHCCCEEEEEcCCCcc-----HHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNG-IGRELAKQFVQHKVTLVCWDIDEKG-----NNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~G-IG~~ia~~la~~Ga~Vvi~~r~~~~-----~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..++||+++||||++| ||+++|++|+++|++|++++|+.+.     ++++.+++...|.+ +..+++|
T Consensus      2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~-~~~v~~D 2199 (3089)
T 3zen_D         2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDAT-LWVVPAN 2199 (3089)
T ss_dssp             CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCE-EEEEECC
T ss_pred             ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCe-EEEEEec
Confidence            3478999999999999 9999999999999999999998876     66677777666777 8888887

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=98.56  E-value=2.5e-08  Score=81.64  Aligned_cols=59  Identities=17%  Similarity=0.217  Sum_probs=45.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc------CCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ------GYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~------g~~~v~~~~~D  159 (159)
                      .+|+++|||+++|||+++|++|+++|++|++++|+.++.++..++++..      +.+ +..+++|
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   65 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGS-LETLQLD   65 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTS-EEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCc-eEEEEec
Confidence            3689999999999999999999999999988887665554444444322      356 7888877

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=98.56  E-value=7.2e-08  Score=84.11  Aligned_cols=59  Identities=17%  Similarity=0.199  Sum_probs=50.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEE-cCC-------------CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVT-LVCW-DID-------------EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~-~r~-------------~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++++||||++|||+++|+.|+++|++ |+++ +|+             .+..+++.+++++.|.+ +.+++||
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-v~~~~~D  323 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGAT-ATVVTCD  323 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCE-EEEEECC
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCE-EEEEECC
Confidence            5899999999999999999999999997 6777 888             45677888899888988 9999988

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=98.56  E-value=1.5e-07  Score=81.69  Aligned_cols=58  Identities=24%  Similarity=0.373  Sum_probs=51.7

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC---CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID---EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~---~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +|+++||||++|||+++|+.|+++|+ +|++++|+   .+..+++.+++++.|.+ +.+++||
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~-v~~~~~D  300 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVR-VTIAACD  300 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCE-EEEEECC
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCe-EEEEEcc
Confidence            48999999999999999999999999 78888886   34578888899988988 9999988

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=98.55  E-value=3.8e-08  Score=77.63  Aligned_cols=43  Identities=21%  Similarity=0.268  Sum_probs=34.9

Q ss_pred             CCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .+..++++|+++||||++|||+++|++|+++|++|++.+|+++
T Consensus        14 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~   56 (253)
T 2nm0_A           14 LVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGE   56 (253)
T ss_dssp             ------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred             CCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH
Confidence            3445678999999999999999999999999999999988754

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=98.53  E-value=1.8e-07  Score=73.34  Aligned_cols=40  Identities=25%  Similarity=0.350  Sum_probs=34.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .+..+|+++||||++|||+++|++|+++|++|++++|+++
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~   57 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFREN   57 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            3456899999999999999999999999999999998764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=98.53  E-value=5.7e-08  Score=75.98  Aligned_cols=41  Identities=17%  Similarity=0.306  Sum_probs=37.2

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+++
T Consensus        10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   50 (247)
T 1uzm_A           10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG   50 (247)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH
Confidence            34678999999999999999999999999999999998754

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=98.52  E-value=6.4e-08  Score=75.49  Aligned_cols=45  Identities=22%  Similarity=0.196  Sum_probs=39.2

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEE-c--CCCccHHHHHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCW-D--IDEKGNNETKQML  145 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~-~--r~~~~~~~~~~ei  145 (159)
                      +|+++||||++|||+++|++|+++|++|+++ +  |+++++++..+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~   48 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN   48 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh
Confidence            5899999999999999999999999999999 6  9887777666554

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=98.51  E-value=3.4e-08  Score=75.94  Aligned_cols=39  Identities=23%  Similarity=0.329  Sum_probs=34.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      +++++|+++||||++|||+++|++|+++|++|++.+|++
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~   40 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQT   40 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGG
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCc
Confidence            457899999999999999999999999999999998864

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.50  E-value=7.4e-08  Score=77.36  Aligned_cols=50  Identities=10%  Similarity=0.133  Sum_probs=45.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      +++||+++||||++|+|+++++.|+++|++|++++|+.++.+++.++++.
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~  165 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK  165 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999998888888887755

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=98.48  E-value=2.1e-07  Score=74.91  Aligned_cols=59  Identities=22%  Similarity=0.205  Sum_probs=48.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      .+++++||||+++||++++++|+++|++|++++|+.+..++..+++++. +.+ +..+++|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D   63 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKT-PAFHETD   63 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCC-CEEECCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCC-ceEEEee
Confidence            4679999999999999999999999999999999887766666666543 444 6666665

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.46  E-value=3e-07  Score=83.81  Aligned_cols=59  Identities=24%  Similarity=0.344  Sum_probs=53.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHH-HCCC-EEEEEcCC---CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFV-QHKV-TLVCWDID---EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la-~~Ga-~Vvi~~r~---~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+|+++||||++|||+++|+.|+ ++|+ +|++++|+   .+..++..+++++.|.+ +.+++||
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~-v~~~~~D  592 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAE-VSLQACD  592 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCE-EEEEECC
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCc-EEEEEee
Confidence            58999999999999999999999 7999 59999998   56688889999988988 9999998

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=98.46  E-value=1.2e-07  Score=73.59  Aligned_cols=38  Identities=18%  Similarity=0.272  Sum_probs=34.6

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .++|+++|||+++|||+++|++|+++|++|++++|+++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   42 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN   42 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence            46899999999999999999999999999999998754

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.45  E-value=3.8e-07  Score=89.21  Aligned_cols=62  Identities=23%  Similarity=0.307  Sum_probs=52.4

Q ss_pred             CCCCCCeEEEeCCCCC-chHHHHHHHHHCCCEEEEE-cCCCccHHHHHHHHHHc----CCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNG-IGRELAKQFVQHKVTLVCW-DIDEKGNNETKQMLEEQ----GYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~G-IG~~ia~~la~~Ga~Vvi~-~r~~~~~~~~~~ei~~~----g~~~v~~~~~D  159 (159)
                      .++.||+++||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.+.    |.+ +.++++|
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~-v~~v~~D  738 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGST-LIVVPFN  738 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCE-EEEEECC
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCe-EEEEEec
Confidence            4578999999999998 9999999999999999998 68887787777776433    556 8888887

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.45  E-value=4.5e-07  Score=76.78  Aligned_cols=62  Identities=15%  Similarity=0.146  Sum_probs=52.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHH-HCCCEEEEEcCCCcc------------HHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFV-QHKVTLVCWDIDEKG------------NNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la-~~Ga~Vvi~~r~~~~------------~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ....+|+++|||+|+|||++++..+| +.|+++++++++.+.            .+++.+++++.|.+ +..+.||
T Consensus        46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~-a~~i~~D  120 (401)
T 4ggo_A           46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLY-SVTIDGD  120 (401)
T ss_dssp             TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCC-EEEEESC
T ss_pred             ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCC-ceeEeCC
Confidence            34568999999999999999999999 689999988775432            35677888999999 9999998

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=98.44  E-value=1.9e-07  Score=73.03  Aligned_cols=38  Identities=32%  Similarity=0.504  Sum_probs=35.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      ++++|+++|||+++|||++++++|+++|++|++++|++
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~   41 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAF   41 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCch
Confidence            57899999999999999999999999999999998864

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=98.44  E-value=3e-07  Score=79.36  Aligned_cols=59  Identities=20%  Similarity=0.297  Sum_probs=51.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCCCc---cHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEK---GNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~~~---~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++++||||++|||+++++.|+++|++ |++++|+.+   ..+++.+++++.|.+ +.+++||
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~-v~~~~~D  287 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGAR-TTVAACD  287 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCE-EEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCE-EEEEEeC
Confidence            5789999999999999999999999995 999999864   467788888888887 8888887

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=98.42  E-value=4.8e-07  Score=78.68  Aligned_cols=59  Identities=24%  Similarity=0.328  Sum_probs=51.7

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCc---cHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEK---GNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~---~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++++||||++|||++++++|+++|+ +|++++|+..   ..++..+++++.|.+ +.+++||
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~-v~~~~~D  320 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCE-VVHAACD  320 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCE-EEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCE-EEEEEeC
Confidence            578999999999999999999999999 6889999863   467788888888887 8888887

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.41  E-value=1.6e-07  Score=72.60  Aligned_cols=37  Identities=14%  Similarity=0.334  Sum_probs=34.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ++|+++||||++|||+++|++|+++|++|++++|+++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~   38 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN   38 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcc
Confidence            5789999999999999999999999999999998754

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=98.40  E-value=3.3e-07  Score=69.85  Aligned_cols=54  Identities=13%  Similarity=0.135  Sum_probs=43.1

Q ss_pred             CCeEEEeCCCCCchHHHHHHHH-HCCCEEEEEcCCCc-cHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFV-QHKVTLVCWDIDEK-GNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la-~~Ga~Vvi~~r~~~-~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .|+++||||++|||++++++|+ ++|++|++.+|+++ +++++.    +.+.+ +..+++|
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~-~~~~~~D   60 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHER-VTVIEGS   60 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTT-EEEEECC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCc-eEEEECC
Confidence            3789999999999999999999 89999999999876 554432    23445 6666665

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=98.39  E-value=6.3e-07  Score=76.81  Aligned_cols=58  Identities=28%  Similarity=0.524  Sum_probs=43.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++|+++||||++|||+++|+.|+++|++|++++|+.. .++..+..++.+.   .++++|
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~-~~~l~~~~~~~~~---~~~~~D  267 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA-AEDLKRVADKVGG---TALTLD  267 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGG-HHHHHHHHHHHTC---EEEECC
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCcc-HHHHHHHHHHcCC---eEEEEe
Confidence            467999999999999999999999999999999998643 2333333333333   355655

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.38  E-value=6.5e-07  Score=87.50  Aligned_cols=61  Identities=21%  Similarity=0.306  Sum_probs=50.4

Q ss_pred             CCCCCeEEEeCCCCC-chHHHHHHHHHCCCEEEEEc-CCCccHHHHHHHHHH----cCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNG-IGRELAKQFVQHKVTLVCWD-IDEKGNNETKQMLEE----QGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~G-IG~~ia~~la~~Ga~Vvi~~-r~~~~~~~~~~ei~~----~g~~~v~~~~~D  159 (159)
                      ++.||+++||||++| ||+++|++|+++|++|++++ |+.+++++..+++.+    .|.+ +.+++||
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~-v~~v~~D  715 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQ-LVVVPFN  715 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCE-EEEEECC
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCe-EEEEEcC
Confidence            578999999999999 99999999999999999985 667777666666533    2566 8888887

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.38  E-value=3.3e-07  Score=88.09  Aligned_cols=62  Identities=23%  Similarity=0.307  Sum_probs=51.7

Q ss_pred             CCCCCCeEEEeCCCCC-chHHHHHHHHHCCCEEEEE-cCCCccHHHHHHHHHHc----CCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNG-IGRELAKQFVQHKVTLVCW-DIDEKGNNETKQMLEEQ----GYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~G-IG~~ia~~la~~Ga~Vvi~-~r~~~~~~~~~~ei~~~----g~~~v~~~~~D  159 (159)
                      .+++||+++||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.+.    |.+ +.++++|
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~-V~vV~~D  539 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGST-LIVVPFN  539 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCE-EEEEECC
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCe-EEEEEeC
Confidence            4578999999999998 9999999999999999998 67777777777776433    556 7888887

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=98.38  E-value=4.4e-07  Score=73.43  Aligned_cols=37  Identities=19%  Similarity=0.337  Sum_probs=34.3

Q ss_pred             CCCCCeEEEeCC--CCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040          98 SLEGEIILLTGA--GNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        98 ~l~gk~~lITG~--s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      ++++|+++|||+  ++|||+++|++|+++|++|++++|+
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP   44 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence            478999999999  8999999999999999999999864

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=98.37  E-value=8.5e-07  Score=71.03  Aligned_cols=61  Identities=15%  Similarity=0.188  Sum_probs=48.9

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEE-ecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTY-KRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~-~~D  159 (159)
                      .+++++++||||+|+||..++++|+++|++|++++|+.+..+++.+.++.. +.+ +..+ ++|
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D   70 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGR-FETAVVED   70 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTT-EEEEECSC
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCc-eEEEEecC
Confidence            457899999999999999999999999999999999887766666655443 344 6666 565

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=98.36  E-value=3.6e-07  Score=70.84  Aligned_cols=37  Identities=24%  Similarity=0.377  Sum_probs=34.4

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      +|+++|||+++|||+++|++|+++|++|++++|++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~   38 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE   38 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            6899999999999999999999999999999998643

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=98.32  E-value=7.6e-07  Score=72.91  Aligned_cols=59  Identities=15%  Similarity=0.365  Sum_probs=48.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHC-CC-EEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQH-KV-TLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~-Ga-~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++|+++||||+|+||++++++|+++ |+ +|++.+|++++.++..++++  +.+ +.++.+|
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~-v~~~~~D   78 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPR-MRFFIGD   78 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTT-EEEEECC
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCC-EEEEECC
Confidence            467899999999999999999999999 98 99999999877766665553  234 6667666

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=98.31  E-value=1.2e-06  Score=69.94  Aligned_cols=37  Identities=22%  Similarity=0.356  Sum_probs=34.1

Q ss_pred             CCCCCeEEEeCCC--CCchHHHHHHHHHCCCEEEEEcCC
Q psy2040          98 SLEGEIILLTGAG--NGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        98 ~l~gk~~lITG~s--~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      ++++|+++||||+  +|||+++|++|+++|++|++++|+
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~   43 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWV   43 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEH
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeecc
Confidence            5789999999999  999999999999999999998753

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=98.29  E-value=3.3e-07  Score=74.01  Aligned_cols=42  Identities=17%  Similarity=0.190  Sum_probs=37.6

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      +..++++++++||||+++||.+++++|+++|++|++++|+.+
T Consensus        14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~   55 (330)
T 2pzm_A           14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFAT   55 (330)
T ss_dssp             CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSS
T ss_pred             CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCc
Confidence            445688999999999999999999999999999999998643

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=98.27  E-value=2.4e-06  Score=69.03  Aligned_cols=37  Identities=19%  Similarity=0.355  Sum_probs=34.4

Q ss_pred             CCCCCeEEEeCC--CCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040          98 SLEGEIILLTGA--GNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        98 ~l~gk~~lITG~--s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      +++||+++||||  ++|||+++|++|+++|++|++++|+
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWP   44 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecc
Confidence            478999999999  8999999999999999999999865

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=98.27  E-value=1e-06  Score=70.61  Aligned_cols=39  Identities=23%  Similarity=0.189  Sum_probs=35.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      ++|+++||||+|+||.+++++|+++|++|++++|+.+..
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~   40 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEF   40 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccc
Confidence            578999999999999999999999999999999987653

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=98.24  E-value=3.4e-07  Score=70.37  Aligned_cols=41  Identities=15%  Similarity=0.293  Sum_probs=36.6

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNN  139 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~  139 (159)
                      +++|+++||||++|||++++++|+++|+  +|++++|++++.+
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~   58 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD   58 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcc
Confidence            4578999999999999999999999999  9999999876543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=98.23  E-value=9e-07  Score=68.79  Aligned_cols=36  Identities=28%  Similarity=0.437  Sum_probs=33.4

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      |+++||||++|||+++|++|+++|++|++++|++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~   37 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE   37 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            689999999999999999999999999999998653

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.21  E-value=9.1e-07  Score=67.83  Aligned_cols=35  Identities=26%  Similarity=0.418  Sum_probs=32.9

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      +|+++||||++|||++++++|+++|++|++++|++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~   36 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRR   36 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCc
Confidence            68999999999999999999999999999988864

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=98.20  E-value=3.1e-06  Score=68.41  Aligned_cols=60  Identities=13%  Similarity=0.168  Sum_probs=47.1

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC-----CCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG-----YKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g-----~~~v~~~~~D  159 (159)
                      ++++.++||||+|+||+.++++|.++|++|++++|+.....+..+.++...     .+ +..+++|
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   87 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSR-FCFIEGD   87 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTT-EEEEECC
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCc-eEEEEcc
Confidence            457899999999999999999999999999999998766555555554431     34 6666665

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=98.19  E-value=1e-06  Score=71.54  Aligned_cols=59  Identities=10%  Similarity=0.045  Sum_probs=44.0

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++.++||||+|+||..++++|+++|++|++++|+.+..++..++++ .+.+ +..+++|
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~-~~~~~~D   65 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADG-MQSEIGD   65 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTT-SEEEECC
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCc-eEEEEcc
Confidence            457899999999999999999999999999999998765444433332 1233 4555554

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=98.19  E-value=2.3e-06  Score=68.98  Aligned_cols=58  Identities=19%  Similarity=0.207  Sum_probs=42.8

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc------HHHHHHHHHH-cCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG------NNETKQMLEE-QGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~------~~~~~~ei~~-~g~~~v~~~~~D  159 (159)
                      +|.++||||+++||.+++++|+++|++|++++|+...      .++..+++++ .+.+ +..+++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D   66 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRS-VEFEEMD   66 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCC-CEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCc-eEEEECC
Confidence            5789999999999999999999999999999886432      2333344433 2444 5666665

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=98.18  E-value=2.8e-06  Score=69.24  Aligned_cols=35  Identities=23%  Similarity=0.459  Sum_probs=31.0

Q ss_pred             CCCeEEEeCCCC--CchHHHHHHHHHCCCEEEEEcCC
Q psy2040         100 EGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus       100 ~gk~~lITG~s~--GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      ++|+++|||+++  |||+++|++|+++|++|++.+++
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~   37 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWP   37 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecC
Confidence            378999999986  99999999999999999976644

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=98.18  E-value=1.3e-06  Score=66.86  Aligned_cols=40  Identities=20%  Similarity=0.218  Sum_probs=35.5

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHC--CCEEEEEcCCCccH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGN  138 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~--Ga~Vvi~~r~~~~~  138 (159)
                      .++|+++||||+++||++++++|+++  |++|++.+|++++.
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~   43 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK   43 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCch
Confidence            35789999999999999999999999  89999999986543

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=98.16  E-value=2.2e-06  Score=71.69  Aligned_cols=64  Identities=17%  Similarity=0.078  Sum_probs=48.3

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc---cHHHHHHHHHHc---------CCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK---GNNETKQMLEEQ---------GYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~---~~~~~~~ei~~~---------g~~~v~~~~~D  159 (159)
                      .+....+++++||||+|+||.+++++|+++|++|++++|+++   ..+++.+++++.         +.+ +..+.+|
T Consensus        63 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-v~~v~~D  138 (427)
T 4f6c_A           63 SLSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSN-IEVIVGD  138 (427)
T ss_dssp             SSCCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTT-EEEEEEC
T ss_pred             cCCCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCc-eEEEeCC
Confidence            445567889999999999999999999999999999999887   333444433221         345 6677766

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=98.16  E-value=1e-06  Score=68.04  Aligned_cols=40  Identities=18%  Similarity=0.258  Sum_probs=35.2

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGN  138 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~  138 (159)
                      +..|+++||||++|||++++++|+++| ++|++++|++++.
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~   61 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI   61 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh
Confidence            346899999999999999999999999 8999999987653

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=98.13  E-value=1.5e-06  Score=64.64  Aligned_cols=37  Identities=22%  Similarity=0.097  Sum_probs=34.0

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      +++++|||++++||++++++|+++|++|++.+|++++
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~   39 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR   39 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhh
Confidence            4789999999999999999999999999999998654

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=98.12  E-value=1.1e-06  Score=71.64  Aligned_cols=40  Identities=33%  Similarity=0.444  Sum_probs=36.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHH--CCCEEEEEcCCCc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEK  136 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~--~Ga~Vvi~~r~~~  136 (159)
                      +++++++++||||+|+||.+++++|++  +|++|++++|+..
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~   47 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS   47 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence            357889999999999999999999999  9999999998654

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=98.11  E-value=1.9e-06  Score=69.53  Aligned_cols=43  Identities=19%  Similarity=0.322  Sum_probs=32.2

Q ss_pred             CCCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      +++.+.++|.++||||+|+||..++++|+++|++|++++|+.+
T Consensus        12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~   54 (347)
T 4id9_A           12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS   54 (347)
T ss_dssp             ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred             CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence            4456678999999999999999999999999999999998753

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=98.11  E-value=1.4e-06  Score=67.62  Aligned_cols=37  Identities=27%  Similarity=0.470  Sum_probs=33.7

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHH-CCCEEEEEcCCCc
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQ-HKVTLVCWDIDEK  136 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~-~Ga~Vvi~~r~~~  136 (159)
                      ++|+++||||++|||+++|++|++ .|++|++.+|+++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~   40 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQS   40 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccc
Confidence            578999999999999999999999 7899999888755

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.11  E-value=3.6e-06  Score=84.62  Aligned_cols=59  Identities=17%  Similarity=0.168  Sum_probs=49.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCCCccH---HHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGN---NETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~~~~~---~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+|+++||||++|||+++|+.|+++|++ |++++|+.++.   ++..+++++.|.+ +..++||
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~-v~~~~~D 1945 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQ-VLVSTSN 1945 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCE-EEEECCC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCE-EEEEecC
Confidence            5899999999999999999999999997 88889986554   4556667667877 8888887

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=98.09  E-value=3.4e-06  Score=68.60  Aligned_cols=37  Identities=16%  Similarity=0.193  Sum_probs=31.4

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      +|+++||||+++||.+++++|+++|++|++++|+.+.
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASS   37 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            3689999999999999999999999999999997643

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=98.08  E-value=5.6e-06  Score=67.09  Aligned_cols=38  Identities=21%  Similarity=0.273  Sum_probs=34.7

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ++++.++||||+|+||+.++++|+++|++|++++|+..
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   62 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFAT   62 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence            45678999999999999999999999999999999764

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=98.08  E-value=3e-06  Score=65.12  Aligned_cols=35  Identities=26%  Similarity=0.452  Sum_probs=32.8

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      |+++||||++|||++++++|+++|++|++++|+++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~   36 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQA   36 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence            58999999999999999999999999999999764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=98.07  E-value=4.7e-06  Score=67.04  Aligned_cols=41  Identities=22%  Similarity=0.232  Sum_probs=35.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      ++|.++||||+|+||..++++|+++|++|++++|+.+..++
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~   44 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKK   44 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHH
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHH
Confidence            57899999999999999999999999999998998765443

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=98.07  E-value=1.2e-06  Score=68.90  Aligned_cols=37  Identities=22%  Similarity=0.293  Sum_probs=34.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ++|+++||||++|||++++++|+++|++|++.+|+++
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~   38 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPL   38 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCc
Confidence            4689999999999999999999999999999998764

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=98.06  E-value=9.3e-06  Score=65.12  Aligned_cols=56  Identities=20%  Similarity=0.270  Sum_probs=42.0

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++||||+|+||+.++++|+++|++|++++|+. ...++..++++.. .+ +..+++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~-~~-~~~~~~D   58 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL-GN-FEFVHGD   58 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT-CC-CEEEECC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC-Cc-eEEEEcC
Confidence            4799999999999999999999999999999854 3334444455433 34 5566665

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=98.05  E-value=1.8e-06  Score=69.72  Aligned_cols=41  Identities=17%  Similarity=0.220  Sum_probs=33.7

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ...+++++++||||+++||.+++++|+++|++|++++|+.+
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~   56 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFAT   56 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCc
Confidence            34567889999999999999999999999999999998753

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=98.03  E-value=4e-06  Score=68.39  Aligned_cols=46  Identities=17%  Similarity=0.310  Sum_probs=36.2

Q ss_pred             CCCCCCCCCeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCCccHH
Q psy2040          94 PSEKSLEGEIILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDEKGNN  139 (159)
Q Consensus        94 ~~~~~l~gk~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~~~~~  139 (159)
                      +.+..++++.++||||+|.||..++++|.++ |++|++++|+.++.+
T Consensus        17 ~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~   63 (372)
T 3slg_A           17 QGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLG   63 (372)
T ss_dssp             ------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTG
T ss_pred             cCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhh
Confidence            4455677899999999999999999999998 999999999875543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=98.00  E-value=1.1e-05  Score=63.91  Aligned_cols=35  Identities=17%  Similarity=0.187  Sum_probs=32.8

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      ++.++||||+|++|++++++|+++|++|++.+|+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~   36 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKT   36 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence            46799999999999999999999999999999986

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.99  E-value=6e-06  Score=65.03  Aligned_cols=37  Identities=14%  Similarity=0.132  Sum_probs=33.7

Q ss_pred             CCCCCeEEEeCC----------------CCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040          98 SLEGEIILLTGA----------------GNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        98 ~l~gk~~lITG~----------------s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      ++.||+++||||                ++|+|+++|++++++|++|++++++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~   57 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGP   57 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence            578999999999                6889999999999999999998764

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=97.99  E-value=4.4e-06  Score=68.43  Aligned_cols=36  Identities=17%  Similarity=0.125  Sum_probs=33.2

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      |.++||||+|+||..++++|+++|++|++++|+.+.
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~   64 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSN   64 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCcc
Confidence            789999999999999999999999999999987543

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=97.99  E-value=4.1e-06  Score=62.75  Aligned_cols=42  Identities=24%  Similarity=0.328  Sum_probs=36.2

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      |+++||||++|||++++++|+++  +|++++|++++.++..+++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~   42 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV   42 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc
Confidence            57999999999999999999998  9999999887766655443

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=97.97  E-value=8.6e-06  Score=72.38  Aligned_cols=62  Identities=19%  Similarity=0.224  Sum_probs=42.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      ..+++|+++||||+++||.+++++|+++|++|++++|+.....+..++++.. +.+ +..+++|
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-v~~v~~D   69 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHH-IPFYEVD   69 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSC-CCEEECC
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCc-eEEEEcC
Confidence            3467899999999999999999999999999999998765433333333221 223 4455554

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=97.97  E-value=6.1e-06  Score=61.77  Aligned_cols=32  Identities=22%  Similarity=0.359  Sum_probs=30.2

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      .++||||++|||++++++|+ +|++|++++|++
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~   36 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHS   36 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSS
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCc
Confidence            69999999999999999999 999999999874

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=97.96  E-value=1.6e-05  Score=63.56  Aligned_cols=56  Identities=14%  Similarity=0.138  Sum_probs=41.3

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+.++||||+|++|.+++++|.++|++|.+++|+.+...+..++++..+   +..+++|
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~---v~~v~~D   66 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLG---AIIVKGE   66 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTT---CEEEECC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCC---CEEEEec
Confidence            3579999999999999999999999999999998752222333344334   3355554

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=97.96  E-value=9.2e-06  Score=65.25  Aligned_cols=37  Identities=14%  Similarity=0.069  Sum_probs=34.0

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      +|.++||||+|+||..++++|+++|++|++..|+.+.
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~   45 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDN   45 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcch
Confidence            6899999999999999999999999999988887654

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=97.96  E-value=1.1e-05  Score=64.73  Aligned_cols=56  Identities=18%  Similarity=0.199  Sum_probs=38.8

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      .++||||+++||++++++|+++|++|+++++......+..+++++. +.+ +..+++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D   58 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKH-PTFVEGD   58 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSC-CEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCc-ceEEEcc
Confidence            5899999999999999999999999999886433222222233222 334 5555555

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=97.95  E-value=6.1e-06  Score=66.40  Aligned_cols=40  Identities=23%  Similarity=0.370  Sum_probs=35.8

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCC-------CEEEEEcCCCc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHK-------VTLVCWDIDEK  136 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~G-------a~Vvi~~r~~~  136 (159)
                      ..+++++++||||+++||..++++|+++|       ++|++++|+.+
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~   56 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQP   56 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCC
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCC
Confidence            34678899999999999999999999999       89999998754

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=97.94  E-value=2.2e-05  Score=66.97  Aligned_cols=42  Identities=31%  Similarity=0.398  Sum_probs=37.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHC---CCEEEEEcCCCccH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQH---KVTLVCWDIDEKGN  138 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~---Ga~Vvi~~r~~~~~  138 (159)
                      ...++|+++||||+|+||.+++++|+++   |++|++++|+++..
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~  113 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE  113 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH
Confidence            4567899999999999999999999999   99999999987653

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=97.94  E-value=7e-06  Score=65.78  Aligned_cols=39  Identities=18%  Similarity=0.090  Sum_probs=33.5

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      -.++.++||||+|+||.+++++|+++|++|++++|+.+.
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   50 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSS   50 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence            457889999999999999999999999999999997653

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=97.94  E-value=3.6e-06  Score=67.03  Aligned_cols=35  Identities=14%  Similarity=0.123  Sum_probs=32.0

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DE  135 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~  135 (159)
                      ||+++||||+|+||++++++|+++|++|++.+| +.
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~   36 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADP   36 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC-
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCc
Confidence            578999999999999999999999999999888 54

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.92  E-value=9.9e-06  Score=60.89  Aligned_cols=38  Identities=11%  Similarity=0.057  Sum_probs=34.6

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      .++||||+++||++++++|+++|++|++++|++++.++
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~   39 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ   39 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh
Confidence            58999999999999999999999999999999866554

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=97.91  E-value=6.8e-06  Score=66.37  Aligned_cols=40  Identities=18%  Similarity=0.189  Sum_probs=33.8

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .+++++.++||||+|+||..++++|+++|++|++++|+..
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   62 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT   62 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence            4467889999999999999999999999999999998754

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=97.91  E-value=1e-05  Score=60.67  Aligned_cols=38  Identities=16%  Similarity=0.211  Sum_probs=34.7

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCcc
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKG  137 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~  137 (159)
                      +++.++||||+++||++++++|+++|.  +|++++|++++
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~   43 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA   43 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc
Confidence            467899999999999999999999998  99999998754

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.88  E-value=5.9e-06  Score=62.75  Aligned_cols=36  Identities=17%  Similarity=0.204  Sum_probs=33.6

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      +.++||||+|+||+.++++|+++|++|++++|++++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   40 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK   40 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGG
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCccc
Confidence            689999999999999999999999999999998654

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=97.88  E-value=3.8e-05  Score=62.96  Aligned_cols=37  Identities=16%  Similarity=0.209  Sum_probs=33.2

Q ss_pred             CCeEEEeCCCCCchHHHHHHHH-HCCCEEEEEcCCCcc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFV-QHKVTLVCWDIDEKG  137 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la-~~Ga~Vvi~~r~~~~  137 (159)
                      +++++||||+++||.+++++|+ ++|++|++++|+...
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~   39 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGT   39 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcc
Confidence            3579999999999999999999 999999999987544

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.87  E-value=1.1e-05  Score=65.92  Aligned_cols=35  Identities=17%  Similarity=0.154  Sum_probs=32.7

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      |+++||||+++||.+++++|+++|++|++++|+.+
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   59 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSS   59 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCcc
Confidence            68999999999999999999999999999998754

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=97.87  E-value=3.1e-05  Score=61.82  Aligned_cols=35  Identities=14%  Similarity=0.152  Sum_probs=32.6

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      .+.++||||+|++|.+++++|+++|++|.+++|+.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~   38 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPL   38 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCC
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCc
Confidence            35799999999999999999999999999999986

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.86  E-value=1.3e-05  Score=64.34  Aligned_cols=48  Identities=17%  Similarity=0.324  Sum_probs=43.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      ++++|+++|||++ |+|+++++.|++.| +|++++|+.++++++++++..
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~  172 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE  172 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhh
Confidence            4678999999997 99999999999999 999999999888888877754

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=97.86  E-value=2.9e-05  Score=61.46  Aligned_cols=38  Identities=8%  Similarity=0.256  Sum_probs=34.8

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGN  138 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~  138 (159)
                      +|.++|||++|++|++++++|+++| ++|.+.+|++++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~   43 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK   43 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCH
Confidence            5789999999999999999999999 9999999987654

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.85  E-value=1.2e-05  Score=60.74  Aligned_cols=38  Identities=13%  Similarity=0.141  Sum_probs=34.3

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      .++||||+++||++++++|+++|++|++++|++++.++
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~   39 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD   39 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence            48999999999999999999999999999998765543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=97.84  E-value=2e-05  Score=63.84  Aligned_cols=37  Identities=16%  Similarity=0.078  Sum_probs=32.6

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      +..+.++||||+|+||+.++++|.++|++|.+.+|+.
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~   44 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG   44 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence            3467899999999999999999999999999999976

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=97.83  E-value=3e-05  Score=63.65  Aligned_cols=38  Identities=13%  Similarity=0.128  Sum_probs=32.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      ..++..++||||+|.||.+++++|+++|++|++++|+.
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~   45 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLV   45 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCH
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecC
Confidence            34678999999999999999999999999999998864

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=97.83  E-value=3.3e-05  Score=61.10  Aligned_cols=36  Identities=28%  Similarity=0.230  Sum_probs=33.1

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .+.++||||+|++|..++++|+++|++|++.+|+..
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~   39 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVREST   39 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcc
Confidence            467999999999999999999999999999999854

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=97.79  E-value=1.5e-05  Score=65.37  Aligned_cols=40  Identities=15%  Similarity=0.206  Sum_probs=36.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCcc
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKG  137 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~  137 (159)
                      .++++.++||||+++||..++++|+++| ++|++++|+.+.
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   69 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSA   69 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTC
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCC
Confidence            4678899999999999999999999999 999999987543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=97.76  E-value=2.1e-05  Score=64.72  Aligned_cols=40  Identities=23%  Similarity=0.277  Sum_probs=35.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      +.+++.++||||+++||..++++|+++|++|++++|+.+.
T Consensus        26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   65 (379)
T 2c5a_A           26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNE   65 (379)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCS
T ss_pred             cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCcc
Confidence            4467899999999999999999999999999999987543

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=97.72  E-value=7.5e-05  Score=61.26  Aligned_cols=56  Identities=14%  Similarity=0.100  Sum_probs=42.3

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++.++|||++++||+.++++|+++|++|++.+|++++..  .+++.+. .. +..+++|
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~~-~~-v~~v~~D   59 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAI-PN-VTLFQGP   59 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHTS-TT-EEEEESC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhhc-CC-cEEEECC
Confidence            3678999999999999999999999999999999877642  1233222 23 5556665

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=97.71  E-value=9.9e-05  Score=58.41  Aligned_cols=36  Identities=14%  Similarity=0.122  Sum_probs=33.0

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .+.++||||+|++|+.++++|.++|++|++.+|+..
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~   39 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEV   39 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCc
Confidence            467999999999999999999999999999999853

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.71  E-value=3.2e-05  Score=61.59  Aligned_cols=49  Identities=18%  Similarity=0.224  Sum_probs=43.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      ++.+|+++|+|+ +|+|+++++.|++.|++|++++|+.++++++++++..
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~  164 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH  164 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhc
Confidence            467899999998 7999999999999999999999999888888877643

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.70  E-value=4.4e-05  Score=61.64  Aligned_cols=50  Identities=22%  Similarity=0.389  Sum_probs=45.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHHc
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEEQ  148 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~~  148 (159)
                      ++++|.++|+|+ +|+|++++..|++.|+ +|.+++|+.++++++++++...
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~  174 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA  174 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhh
Confidence            577999999998 7999999999999998 7999999999999998888755

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.69  E-value=8.9e-05  Score=60.87  Aligned_cols=51  Identities=14%  Similarity=0.255  Sum_probs=44.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC---CccHHHHHHHHHHc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID---EKGNNETKQMLEEQ  148 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~---~~~~~~~~~ei~~~  148 (159)
                      .++++|.++|+|+ +|+|++++..|++.|+ +|++++|+   .++++++++++.+.
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~  204 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK  204 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh
Confidence            3578999999997 7999999999999998 89999999   77888888887654

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=97.69  E-value=3.4e-05  Score=61.33  Aligned_cols=38  Identities=18%  Similarity=0.266  Sum_probs=32.7

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ...++++||||+|+||..++++|+++|++|++++|+.+
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~   47 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNE   47 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            34678999999999999999999999999999998753

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.68  E-value=2.4e-05  Score=58.63  Aligned_cols=40  Identities=15%  Similarity=0.153  Sum_probs=35.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .|++++|||+++|+|.++++.+...|++|+.+++++++.+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~   77 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE   77 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            5789999999999999999999999999999999876544

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=97.68  E-value=2.8e-05  Score=61.79  Aligned_cols=36  Identities=28%  Similarity=0.381  Sum_probs=30.7

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      +|.++||||+|+||.+++++|+++|++|++++|+.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   37 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRA   37 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCC
Confidence            578999999999999999999999999999987643

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=97.68  E-value=3.9e-05  Score=60.60  Aligned_cols=35  Identities=11%  Similarity=0.209  Sum_probs=31.7

Q ss_pred             CCCeEEEeCC----------------CCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040         100 EGEIILLTGA----------------GNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus       100 ~gk~~lITG~----------------s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      .||+++||||                +|++|.++|++++++|++|++++++
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~   52 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTK   52 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5899999999                6779999999999999999998875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=97.68  E-value=3.5e-05  Score=61.69  Aligned_cols=37  Identities=16%  Similarity=0.051  Sum_probs=33.8

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      ..++||||+|+||..++++|+++|++|++++|+.++.
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   50 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQI   50 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCG
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhh
Confidence            3799999999999999999999999999999987654

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=97.67  E-value=2.1e-05  Score=63.03  Aligned_cols=35  Identities=17%  Similarity=0.209  Sum_probs=31.5

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHK--VTLVCWDIDE  135 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~  135 (159)
                      ++.++||||+++||++++++|+++|  ++|++.+|+.
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~   39 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLG   39 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence            4579999999999999999999987  8999998864

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.67  E-value=3e-05  Score=58.72  Aligned_cols=35  Identities=14%  Similarity=0.248  Sum_probs=32.5

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      .++||||+++||++++++|+++|++|++.+|++++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~   36 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQ   36 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGG
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence            58999999999999999999999999999998654

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=97.67  E-value=3.4e-05  Score=61.01  Aligned_cols=38  Identities=26%  Similarity=0.233  Sum_probs=33.9

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ++++.++||||+|+||..++++|+++|++|++++|+.+
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            45789999999999999999999999999999999765

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.67  E-value=6.9e-05  Score=50.86  Aligned_cols=42  Identities=19%  Similarity=0.109  Sum_probs=36.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETK  142 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~  142 (159)
                      .++.++|+|+ |++|..+++.|.+.| ++|++++|++++.++..
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~   46 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN   46 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Confidence            3578999999 999999999999999 89999999887665543

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=97.66  E-value=3.5e-05  Score=60.28  Aligned_cols=39  Identities=13%  Similarity=0.196  Sum_probs=34.7

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHC--CCEEEEEcCCCccHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNE  140 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~--Ga~Vvi~~r~~~~~~~  140 (159)
                      |.++||||+|+||+.++++|+++  |++|++.+|++++.++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~   41 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST   41 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH
Confidence            46899999999999999999998  9999999998766543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=97.64  E-value=4.9e-05  Score=60.83  Aligned_cols=37  Identities=19%  Similarity=0.320  Sum_probs=33.1

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCCccH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDEKGN  138 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~~~~  138 (159)
                      +.++||||+|+||..++++|+++ |++|++++|+.++.
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~   38 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI   38 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGG
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchH
Confidence            36899999999999999999998 89999999986553

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=97.60  E-value=2e-05  Score=63.50  Aligned_cols=39  Identities=21%  Similarity=0.250  Sum_probs=31.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHK--VTLVCWDIDE  135 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~  135 (159)
                      +.++++.++||||+|+||..++++|+++|  ++|+..+|+.
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~   60 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALT   60 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCC
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccc
Confidence            34567899999999999999999999999  6777777653

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=97.60  E-value=4e-05  Score=62.10  Aligned_cols=41  Identities=22%  Similarity=0.396  Sum_probs=31.8

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCc
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEK  136 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~  136 (159)
                      |.+++++.++||||+|+||..++++|+++| ++|++++|+.+
T Consensus        41 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   82 (357)
T 2x6t_A           41 GSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD   82 (357)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSS
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCC
Confidence            344667899999999999999999999999 89999988654

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=97.58  E-value=6.3e-05  Score=59.55  Aligned_cols=36  Identities=28%  Similarity=0.332  Sum_probs=32.7

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      +.++||||+++||+.++++|+++|++|++++|+.+.
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSG   36 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence            469999999999999999999999999999987654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=97.57  E-value=0.00013  Score=57.29  Aligned_cols=53  Identities=25%  Similarity=0.357  Sum_probs=39.3

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc---cHHHHHHHHHHcCCC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK---GNNETKQMLEEQGYK  151 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~---~~~~~~~ei~~~g~~  151 (159)
                      ...+.++||||+|+||++++++|+++|++|++++|+..   ..+++.+.++..+.+
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~Dl~d~~~~~~~~~~~~~d   65 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPN   65 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCS
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCccCCCCCHHHHHHHHHhcCCC
Confidence            45689999999999999999999999999999988642   233444444433454

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=97.56  E-value=0.00016  Score=56.53  Aligned_cols=39  Identities=10%  Similarity=0.093  Sum_probs=35.0

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      +.++|||+ |.||..++++|.++|++|++.+|++++.+..
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   44 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAI   44 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHH
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhH
Confidence            68999998 9999999999999999999999998765544

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=97.52  E-value=0.00017  Score=57.19  Aligned_cols=55  Identities=7%  Similarity=0.147  Sum_probs=40.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC----ccHHHHHHHHHHcCCCeEEE
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE----KGNNETKQMLEEQGYKNIHT  155 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~----~~~~~~~~ei~~~g~~~v~~  155 (159)
                      .++.++||||+|+||..++++|+++|++|++++|+.    ...+.+.+.+++.+.+ +++
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~~D~~d~~~~~~~~~~~~~d-~vi   60 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERID-QVY   60 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCS-EEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCccCCccCHHHHHHHHHhcCCC-EEE
Confidence            357899999999999999999999999999887743    2234444444433555 443

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=97.50  E-value=9.6e-05  Score=63.23  Aligned_cols=38  Identities=21%  Similarity=0.204  Sum_probs=34.7

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      ..++++||||+|.||..++++|.++|++|++.+|+.+.
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~  186 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNE  186 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSH
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCCh
Confidence            35799999999999999999999999999999998773

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.50  E-value=8.7e-05  Score=64.37  Aligned_cols=45  Identities=18%  Similarity=0.342  Sum_probs=39.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .+.||+++|||++ |||+++|+.|++.|++|+++++++.+.++..+
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~  306 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM  306 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            5789999999987 99999999999999999999998866555443

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.49  E-value=3.9e-05  Score=66.66  Aligned_cols=47  Identities=19%  Similarity=0.263  Sum_probs=37.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      ++++|+++|||+ +|+|+++++.|++.|++|++++|+.++++++++++
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~  407 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI  407 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc
Confidence            467899999999 59999999999999999999999988888877665

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.47  E-value=0.00019  Score=57.89  Aligned_cols=50  Identities=20%  Similarity=0.333  Sum_probs=44.9

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHHc
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEEQ  148 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~~  148 (159)
                      ++.+|.++|+|+ +|.|++++..|++.|+ +|.+++|+.++.+++++++...
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~  173 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY  173 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc
Confidence            568999999998 6999999999999996 8999999999999998888653

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=97.45  E-value=0.00018  Score=56.34  Aligned_cols=52  Identities=17%  Similarity=0.306  Sum_probs=39.9

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc---cHHHHHHHHHHcCCCeEEE
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK---GNNETKQMLEEQGYKNIHT  155 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~---~~~~~~~ei~~~g~~~v~~  155 (159)
                      .++||||+|+||.+++++|.++|++|++++|.+.   ..+.+.+.++..+.+ +++
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~D~~d~~~~~~~~~~~~~d-~vi   61 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPH-III   61 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTTSCTTCHHHHHHHHHHHCCS-EEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecccccCCCCHHHHHHHHHhcCCC-EEE
Confidence            7999999999999999999999999999988532   334444555544555 443

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=97.43  E-value=6.1e-05  Score=60.80  Aligned_cols=36  Identities=17%  Similarity=0.183  Sum_probs=32.6

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCC-----CEEEEEcCCCc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHK-----VTLVCWDIDEK  136 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~G-----a~Vvi~~r~~~  136 (159)
                      ++.++||||+|.||..++++|.++|     ++|++++|+.+
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~   41 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTR   41 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCC
Confidence            4689999999999999999999999     99999988654

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.43  E-value=0.00011  Score=58.60  Aligned_cols=49  Identities=14%  Similarity=0.183  Sum_probs=44.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      ++++|.++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~  164 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP  164 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccc
Confidence            467899999998 7999999999999999999999999988888887754

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=97.42  E-value=9.5e-05  Score=65.44  Aligned_cols=40  Identities=18%  Similarity=0.289  Sum_probs=35.1

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCCccH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDEKGN  138 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~~~~  138 (159)
                      +++++++||||+|+||.+++++|+++ |++|++++|+.+..
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~  353 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI  353 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTT
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhh
Confidence            46789999999999999999999998 89999999976543

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=97.42  E-value=0.00014  Score=57.82  Aligned_cols=36  Identities=14%  Similarity=0.078  Sum_probs=33.1

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ++.++||||+|.||..++++|.++|++|++++|+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   37 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIG   37 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCC
Confidence            478999999999999999999999999999999743

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=97.40  E-value=6.4e-05  Score=60.41  Aligned_cols=34  Identities=21%  Similarity=0.283  Sum_probs=31.6

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHC--CCEEEEEcCCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDE  135 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~--Ga~Vvi~~r~~  135 (159)
                      +.++||||+|+||..++++|+++  |++|++.+|+.
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~   40 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLT   40 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCC
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence            68999999999999999999998  89999999864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.38  E-value=0.00015  Score=58.70  Aligned_cols=42  Identities=14%  Similarity=0.145  Sum_probs=37.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|||+++|+|..+++.+.+.|++|+++++++++.+.+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~  186 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL  186 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            589999999999999999999999999999999987665544

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=97.38  E-value=0.00014  Score=57.62  Aligned_cols=32  Identities=19%  Similarity=0.330  Sum_probs=30.0

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      .++||||+++||++++++|+++|++|++++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~   33 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNL   33 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            58999999999999999999999999998873

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=97.36  E-value=4.3e-05  Score=59.59  Aligned_cols=36  Identities=22%  Similarity=0.277  Sum_probs=32.8

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .|+++|||++++||+.++++|+++|++|++.+|+++
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   37 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDL   37 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence            368999999999999999999999999999998754

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=97.35  E-value=0.0001  Score=59.47  Aligned_cols=33  Identities=27%  Similarity=0.387  Sum_probs=30.2

Q ss_pred             eEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDE  135 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~  135 (159)
                      .++||||+++||.+++++|+++ |++|++.+|+.
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~   35 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLT   35 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCC
Confidence            4899999999999999999998 79999998864

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.35  E-value=0.00048  Score=56.43  Aligned_cols=51  Identities=14%  Similarity=0.232  Sum_probs=44.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC---CccHHHHHHHHHHc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID---EKGNNETKQMLEEQ  148 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~---~~~~~~~~~ei~~~  148 (159)
                      .++++|.++|+|+ +|.|++++..|++.|+ +|.+++|+   .++++++++++...
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~  198 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN  198 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc
Confidence            3578999999997 8999999999999998 89999999   77788888887654

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.34  E-value=0.00025  Score=56.93  Aligned_cols=50  Identities=26%  Similarity=0.272  Sum_probs=44.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      .++++|.++|+|+ +|.|++++..|++.|+ +|.+++|+.++++++++++..
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~  166 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH  166 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc
Confidence            3578999999997 6999999999999996 999999999999998887753

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=97.34  E-value=0.00018  Score=57.27  Aligned_cols=34  Identities=26%  Similarity=0.383  Sum_probs=31.3

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      +.++||||+++||..++++|+++|++|++++|+.
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQ   35 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCC
Confidence            5799999999999999999999999999988753

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.34  E-value=0.00016  Score=51.18  Aligned_cols=42  Identities=10%  Similarity=0.130  Sum_probs=35.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .++.++|+|+ |.+|..+++.|.++|++|+++++++++.++..
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~   46 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE   46 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Confidence            3568999998 67999999999999999999999887655543

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=97.32  E-value=0.0001  Score=58.23  Aligned_cols=37  Identities=27%  Similarity=0.400  Sum_probs=33.0

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHC--CCEEEEEcCCCcc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKG  137 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~--Ga~Vvi~~r~~~~  137 (159)
                      ++.++||||+|+||..++++|+++  |++|++.+|+.+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~   40 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLN   40 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCS
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcc
Confidence            468999999999999999999998  8999999887543

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.30  E-value=0.00028  Score=57.11  Aligned_cols=42  Identities=17%  Similarity=0.245  Sum_probs=37.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|||+++|+|...++.+...|++|+.+++++++.+.+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~  186 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETA  186 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999987665544

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.28  E-value=0.00042  Score=58.24  Aligned_cols=56  Identities=18%  Similarity=0.239  Sum_probs=45.3

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCC---CEEEEEcCCCccHHHHHHHHHHcC-CCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHK---VTLVCWDIDEKGNNETKQMLEEQG-YKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~G---a~Vvi~~r~~~~~~~~~~ei~~~g-~~~v~~~~~D  159 (159)
                      +.++|+|+ +|+|+++++.|+++|   .+|++++|+.+++++.++++...+ .+ +..+++|
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~-~~~~~~D   61 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGE-IDITTVD   61 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCc-eEEEEec
Confidence            46888898 899999999999998   489999999999999988887643 23 5555554

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.25  E-value=0.00012  Score=51.29  Aligned_cols=41  Identities=17%  Similarity=0.315  Sum_probs=33.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      +++++.++|+|+ |++|..+++.|.+.|++|+++++++++.+
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~   43 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVN   43 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHH
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            345678999998 99999999999999999999999865443

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.23  E-value=0.00015  Score=56.45  Aligned_cols=37  Identities=16%  Similarity=0.283  Sum_probs=33.0

Q ss_pred             eEEEeCCCCCchHHHHHHHHHC--CCEEEEEcCCCccHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNN  139 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~--Ga~Vvi~~r~~~~~~  139 (159)
                      .++||||+|+||..++++|.++  |++|++.+|++++.+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~   39 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ   39 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh
Confidence            3799999999999999999998  999999999876544

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.20  E-value=0.00025  Score=57.23  Aligned_cols=42  Identities=14%  Similarity=0.083  Sum_probs=37.1

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|||+++|+|..+++.+...|++|+.+++++++.+.+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~  181 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA  181 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            588999999999999999999999999999999987665544

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=97.19  E-value=0.00071  Score=52.26  Aligned_cols=32  Identities=22%  Similarity=0.312  Sum_probs=29.2

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      +++||||+++||++++++|++ |++|++++|++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~   33 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSS   33 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSS
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCC
Confidence            589999999999999999994 89999998865

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.18  E-value=0.00048  Score=56.09  Aligned_cols=40  Identities=18%  Similarity=0.238  Sum_probs=36.3

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .|++++|+|+++|+|..+++.+...|++|+.+++++++.+
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~  208 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEE  208 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHH
Confidence            5789999999999999999999999999999999877654

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.18  E-value=0.00027  Score=57.19  Aligned_cols=42  Identities=14%  Similarity=0.162  Sum_probs=37.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|+|+++|+|...++.+...|++|+.+++++++.+.+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  190 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFL  190 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            588999999999999999999999999999999988766554

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=97.17  E-value=0.00024  Score=56.82  Aligned_cols=33  Identities=21%  Similarity=0.330  Sum_probs=30.2

Q ss_pred             eEEEeCCCCCchHHHHHHHHHC---C---CEEEEEcCCC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQH---K---VTLVCWDIDE  135 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~---G---a~Vvi~~r~~  135 (159)
                      .++||||+|+||..++++|+++   |   ++|++.+|+.
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~   40 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLT   40 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCC
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCC
Confidence            5899999999999999999997   8   8999998864

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=97.16  E-value=0.00032  Score=55.02  Aligned_cols=36  Identities=19%  Similarity=0.279  Sum_probs=32.1

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      +++.++||| +|.||..++++|.++|++|++++|+.+
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~   37 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQ   37 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            357899999 599999999999999999999998754

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=97.12  E-value=0.00093  Score=52.37  Aligned_cols=32  Identities=28%  Similarity=0.436  Sum_probs=29.9

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      .++||||+|+||..++++|. +|++|++++|+.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~   33 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHS   33 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEecccc
Confidence            58999999999999999999 899999999865

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=97.12  E-value=0.00043  Score=59.51  Aligned_cols=37  Identities=19%  Similarity=0.191  Sum_probs=34.0

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      ++.++||||+|.||..++++|.++|++|++++|+.++
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~  183 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK  183 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence            5789999999999999999999999999999998653

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.12  E-value=0.00045  Score=56.57  Aligned_cols=42  Identities=12%  Similarity=0.113  Sum_probs=37.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|+|+++|+|...++.+...|++|+++++++++.+.+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  203 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA  203 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            588999999999999999999999999999999987765544

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.10  E-value=0.00034  Score=56.74  Aligned_cols=43  Identities=16%  Similarity=0.166  Sum_probs=37.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .|++++|+|+++|+|...++.+...|++|+++++++++.+.+.
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~  197 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLK  197 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            5889999999999999999999999999999999876655443

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.08  E-value=0.00048  Score=56.24  Aligned_cols=41  Identities=10%  Similarity=-0.050  Sum_probs=36.2

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETK  142 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~  142 (159)
                      ++++|||+++|+|...++.+...|+ +|+++++++++.+.+.
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~  203 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLT  203 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence            8999999999999999999999999 9999999876655443

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=97.06  E-value=0.00029  Score=55.84  Aligned_cols=34  Identities=18%  Similarity=0.354  Sum_probs=27.4

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      |+++||||+|+||.+++++|+++|..|++..++.
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~   35 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSS   35 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSS
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCC
Confidence            4799999999999999999999995555544443

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=97.05  E-value=0.00039  Score=59.41  Aligned_cols=42  Identities=7%  Similarity=0.070  Sum_probs=36.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      ++|.++|+| ++|+|+++++.|++.|++|++++|+.++++++.
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la   43 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLS   43 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHH
Confidence            467899997 799999999999999999999999876655543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.04  E-value=0.00038  Score=54.56  Aligned_cols=35  Identities=20%  Similarity=0.196  Sum_probs=31.8

Q ss_pred             eEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCCcc
Q psy2040         103 IILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDEKG  137 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~~~  137 (159)
                      .++||||+|+||+.++++|.++ |++|++.+|++++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~   37 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEK   37 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGG
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHH
Confidence            4899999999999999999998 9999999998654

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.03  E-value=0.00061  Score=55.83  Aligned_cols=40  Identities=23%  Similarity=0.344  Sum_probs=36.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .|++++|+|+++|+|...++.+...|++|+.+++++++.+
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~  209 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK  209 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH
Confidence            4889999999999999999999999999999999876654

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=97.00  E-value=0.00046  Score=54.26  Aligned_cols=35  Identities=23%  Similarity=0.401  Sum_probs=31.3

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCcc
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKG  137 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~  137 (159)
                      .++||||+|+||..++++|+++| ++|++++|+.+.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   36 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG   36 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCC
Confidence            37999999999999999999999 899999887543

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.97  E-value=0.0008  Score=54.37  Aligned_cols=47  Identities=17%  Similarity=0.186  Sum_probs=41.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei  145 (159)
                      ++.+|.++|.|+ ||+|++++..|++.|+ +|.+++|+.++++++++++
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~  185 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREG  185 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHS
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            467899999997 7999999999999998 8999999988887776654

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=96.90  E-value=0.0012  Score=53.52  Aligned_cols=42  Identities=14%  Similarity=0.172  Sum_probs=37.1

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|+|+++|+|...++.+...|++|+.+++++++.+.+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~  207 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRA  207 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999987665544

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=96.88  E-value=0.00071  Score=55.07  Aligned_cols=32  Identities=19%  Similarity=0.250  Sum_probs=30.1

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKV-TLVCWDID  134 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~  134 (159)
                      .++||||+|.||+.++++|+++|. +|+..||+
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~   34 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ   34 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC
Confidence            589999999999999999999999 99999993

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=96.87  E-value=0.00094  Score=52.66  Aligned_cols=35  Identities=14%  Similarity=0.113  Sum_probs=32.0

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      .++||||+|=||..++++|.++|++|.+..|+++.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~   36 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP   36 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence            48999999999999999999999999999997654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=96.87  E-value=0.00084  Score=54.64  Aligned_cols=42  Identities=21%  Similarity=0.355  Sum_probs=36.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|+|+++|+|...++.+... |++|+++++++++.+.+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~  212 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA  212 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            5789999999999999999999888 99999999987665544

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.86  E-value=0.001  Score=54.40  Aligned_cols=42  Identities=19%  Similarity=0.219  Sum_probs=37.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|+||++|+|...++.+...|++|+++++++++.+.+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  208 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEAC  208 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            588999999999999999999999999999999988765543

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=96.85  E-value=0.00059  Score=53.95  Aligned_cols=32  Identities=34%  Similarity=0.538  Sum_probs=29.1

Q ss_pred             EEEeCCCCCchHHHHHHHHHC--CCEEEEEcCCC
Q psy2040         104 ILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDE  135 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~--Ga~Vvi~~r~~  135 (159)
                      ++||||+++||..++++|+++  |++|++.+|+.
T Consensus         2 vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~   35 (317)
T 3ajr_A            2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQ   35 (317)
T ss_dssp             EEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSC
T ss_pred             EEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCC
Confidence            799999999999999999998  88999888753

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=96.81  E-value=0.0014  Score=54.36  Aligned_cols=44  Identities=14%  Similarity=0.210  Sum_probs=39.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .+.+++++|+|+ +++|+.+++.+...|++|+++++++++.+++.
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~  206 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLD  206 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            478899999999 99999999999999999999999987665543

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.80  E-value=0.0017  Score=52.81  Aligned_cols=42  Identities=19%  Similarity=0.230  Sum_probs=37.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|+|+++|+|...++.+...|++|+.+++++++.+.+
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  200 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFV  200 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            588999999999999999999999999999999988776543

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=96.76  E-value=0.0016  Score=52.77  Aligned_cols=42  Identities=19%  Similarity=0.328  Sum_probs=37.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|+|+++|+|...++.+...|++|+.+++++++.+.+
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  185 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEEL  185 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            588999999999999999988888999999999988776544

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.74  E-value=0.0013  Score=53.06  Aligned_cols=40  Identities=18%  Similarity=0.287  Sum_probs=36.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .|++++|+|+++|+|...++.+...|++|+.+++++++.+
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~  187 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK  187 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            5889999999999999999999999999999999876654

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.72  E-value=0.0017  Score=51.75  Aligned_cols=42  Identities=12%  Similarity=0.124  Sum_probs=37.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|+|+++|+|...++.+...|++|+.+++++++.+.+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  166 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP  166 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            478999999999999999998888999999999988776544

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.70  E-value=0.0019  Score=53.07  Aligned_cols=41  Identities=20%  Similarity=0.215  Sum_probs=36.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      .|++++|+|+++|+|...++.+...|++|+.+++++++.+.
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~  203 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAF  203 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            47899999999999999999988999999999998765543

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=96.68  E-value=0.0014  Score=52.87  Aligned_cols=42  Identities=21%  Similarity=0.232  Sum_probs=36.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|+|+++|+|...++.+...|++|+.+++++++.+.+
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  181 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA  181 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            588999999999999999999888999999999987765543

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.63  E-value=0.0013  Score=53.13  Aligned_cols=46  Identities=11%  Similarity=0.199  Sum_probs=40.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQM  144 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~e  144 (159)
                      ++.+|.++|.|+ ||.|++++..|++.|+ +|.+++|+.+++++++++
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~  165 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGE  165 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTT
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHh
Confidence            467899999997 6999999999999998 899999999887776543

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.61  E-value=0.0045  Score=44.38  Aligned_cols=41  Identities=7%  Similarity=0.007  Sum_probs=33.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~  141 (159)
                      .++.++|.|+ |.+|+.+++.|.+.|.+|+++++++ ++.++.
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~   43 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQL   43 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHH
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHH
Confidence            3467888886 9999999999999999999999974 444443

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.60  E-value=0.0026  Score=44.07  Aligned_cols=41  Identities=27%  Similarity=0.420  Sum_probs=33.7

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      ++.++|+|+ |.+|..+++.|.+.|.+|++++++++..++..
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~   44 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKAS   44 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            356888886 99999999999999999999999876655443

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.49  E-value=0.0043  Score=49.75  Aligned_cols=43  Identities=19%  Similarity=0.256  Sum_probs=39.5

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      +|.++|.|+ ||.|++++..|++.|.+|.+++|+.+++++++ ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            789999986 99999999999999999999999999998887 54

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=96.41  E-value=0.0043  Score=48.30  Aligned_cols=29  Identities=21%  Similarity=0.304  Sum_probs=26.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV  126 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga  126 (159)
                      .++++.++||||+|.||+.++++|.++|+
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~   31 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG   31 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC
Confidence            35678999999999999999999999985

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.40  E-value=0.002  Score=55.36  Aligned_cols=45  Identities=9%  Similarity=0.127  Sum_probs=36.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCCccHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      +++++.++|+|+ ||+|+++++.|++. |.+|.+++|+.++++++++
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~   65 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAK   65 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHG
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHH
Confidence            456789999997 99999999999998 7899999999877766554

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=96.38  E-value=0.0037  Score=51.59  Aligned_cols=45  Identities=18%  Similarity=0.226  Sum_probs=39.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .+.+++++|+|+ ||+|+..++.+...|++|++++|++++++++.+
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~  208 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLET  208 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence            366799999999 999999999999999999999999877766543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.38  E-value=0.0038  Score=50.74  Aligned_cols=41  Identities=2%  Similarity=-0.051  Sum_probs=36.0

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      +++++|+||++|+|...++.+...|++|+.+++++++.+.+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  205 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALL  205 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            47999999999999999988888999999999988776544

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=96.34  E-value=0.0016  Score=46.39  Aligned_cols=44  Identities=18%  Similarity=0.185  Sum_probs=39.0

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      ++.+.|.|+ |++|+.+++.+.+.|++|.+++|++++.++..+++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~   64 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY   64 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence            789999996 99999999999999999999999998887776654

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.34  E-value=0.0045  Score=46.47  Aligned_cols=42  Identities=17%  Similarity=0.200  Sum_probs=36.2

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM  144 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~e  144 (159)
                      .+.|+|+++.+|..+++.|++.|++|.+++|++++.++..++
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            467889899999999999999999999999998776665544

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=96.32  E-value=0.004  Score=44.82  Aligned_cols=42  Identities=17%  Similarity=0.219  Sum_probs=35.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      +..++.++|.|+ |.+|..+++.|.+.|++|+++++++++.++
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~   57 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHR   57 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGG
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence            345778999986 999999999999999999999998776543

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.29  E-value=0.0037  Score=52.58  Aligned_cols=42  Identities=19%  Similarity=0.221  Sum_probs=36.1

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      -.|++++|+|+++|+|...+..+...|++|+++++++++.+.
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~  260 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAA  260 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            358999999999999999998888999999998887765543

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.27  E-value=0.0045  Score=50.29  Aligned_cols=41  Identities=12%  Similarity=0.176  Sum_probs=36.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      .|++++|+||++++|...++.....|++|+.+++++++.+.
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~  190 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEW  190 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            58899999999999999998888899999999998765443

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.15  E-value=0.0044  Score=50.76  Aligned_cols=37  Identities=19%  Similarity=0.214  Sum_probs=33.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      +++|++++|+|+ +|+|...++.+...|++|+.+++++
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~  214 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRRE  214 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            455999999999 9999999998888999999999987

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=96.14  E-value=0.0062  Score=50.64  Aligned_cols=44  Identities=18%  Similarity=0.179  Sum_probs=38.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .+.|++++|.|+ |++|..+++.+...|++|++.|+++++.+.+.
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~  208 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLD  208 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            578999999998 99999999999999999999999887655443

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.13  E-value=0.002  Score=51.82  Aligned_cols=43  Identities=23%  Similarity=0.275  Sum_probs=37.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNET  141 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~  141 (159)
                      ++++|.++|.|+ +|.|++++..|++.|+ +|.+++|+.++.+++
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            467899999997 7999999999999998 899999998776543

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.10  E-value=0.0061  Score=47.84  Aligned_cols=52  Identities=19%  Similarity=0.323  Sum_probs=43.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCC-------------------ccHHHHHHHHHHcCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDE-------------------KGNNETKQMLEEQGY  150 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~-------------------~~~~~~~~ei~~~g~  150 (159)
                      .++++.++|.|+ ||+|..+++.|++.|. ++.++|++.                   .+.+.+++.+++.+.
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np   99 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP   99 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC
Confidence            355788999986 7999999999999997 899999987                   778888888877654

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.03  E-value=0.009  Score=48.35  Aligned_cols=41  Identities=20%  Similarity=0.297  Sum_probs=35.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|+|+ +|+|...++.+...|++|+.+++++++.+.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  204 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA  204 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            4789999999 8899999998889999999999987665543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.01  E-value=0.012  Score=47.66  Aligned_cols=46  Identities=26%  Similarity=0.338  Sum_probs=40.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .+++||.++|.|.++-.|+.+|..|.+.|++|.++.++...+++..
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~~~~  201 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYT  201 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHHHHh
Confidence            4689999999999999999999999999999999998776666543

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.01  E-value=0.0085  Score=49.95  Aligned_cols=47  Identities=21%  Similarity=0.316  Sum_probs=41.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      ++.||++.|.|. +.+|..+|+.+.+.|++|++.|++.+++++.+++.
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            688999999987 77999999999999999999999988777776654

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.91  E-value=0.021  Score=48.30  Aligned_cols=54  Identities=24%  Similarity=0.276  Sum_probs=42.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK  151 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~  151 (159)
                      .++.+|.+.+-|. ++.|.+.|+.|.++|++|.+.|+++.......+++++.|.+
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~   58 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIK   58 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCE
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCE
Confidence            4567999999998 88999999999999999999998764333445567766654

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=95.90  E-value=0.011  Score=41.87  Aligned_cols=39  Identities=21%  Similarity=0.349  Sum_probs=33.3

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      ++++|.|+ |.+|..+++.|.+.|.+|+++++++++.++.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~   46 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDEL   46 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHH
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence            46777786 8899999999999999999999998766554

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=95.87  E-value=0.0085  Score=50.20  Aligned_cols=47  Identities=26%  Similarity=0.378  Sum_probs=40.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei  145 (159)
                      ++.|++++|.|+ |++|..+++.+...|+ +|++++|+.++.++.++++
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~  211 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL  211 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            367999999998 9999999999999998 8999999987766655544

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=95.81  E-value=0.02  Score=46.48  Aligned_cols=52  Identities=15%  Similarity=0.167  Sum_probs=37.3

Q ss_pred             CC-CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040         100 EG-EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK  151 (159)
Q Consensus       100 ~g-k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~  151 (159)
                      .| ++++|+|+++++|...+.-....|++++.++++.++.++..+.+++.|..
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~  218 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT  218 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCe
Confidence            47 89999999999999888777778999988877665533333333344443

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=95.79  E-value=0.0091  Score=47.91  Aligned_cols=39  Identities=18%  Similarity=0.209  Sum_probs=34.5

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      +++|+|+++|+|...++.....|++|+.+++++++.+.+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  190 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL  190 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            799999999999999988888999999999988776554

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=95.68  E-value=0.01  Score=48.15  Aligned_cols=39  Identities=15%  Similarity=0.350  Sum_probs=33.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .|++++|+|+++|+|...++.+...|++|+.+ +++++.+
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~  188 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLE  188 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHH
Confidence            58899999999999999999988999999888 6655443

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.66  E-value=0.0092  Score=47.92  Aligned_cols=39  Identities=18%  Similarity=0.244  Sum_probs=34.2

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      +++|+|+++|+|...++.....|++|+.+++++++.+.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            799999999999999888888899999999988776544

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=95.64  E-value=0.0091  Score=43.87  Aligned_cols=43  Identities=14%  Similarity=0.160  Sum_probs=35.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCCccHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDEKGNNET  141 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~~~~~~~  141 (159)
                      ++.++.++|.| .|.+|..+++.|.+. |++|+++++++++.++.
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~   79 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQH   79 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH
Confidence            35566788888 599999999999999 99999999998765543

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=95.61  E-value=0.0074  Score=43.97  Aligned_cols=48  Identities=8%  Similarity=0.058  Sum_probs=37.3

Q ss_pred             CCchHHHHHHHHHCCCEEEEEcCCCccHH---HHHHHHHHcCCCeEEEEecC
Q psy2040         111 NGIGRELAKQFVQHKVTLVCWDIDEKGNN---ETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       111 ~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~---~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +-++.+.++.|++.|++|++.+|+++..+   +..+++++.|.+ +..+++|
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~-~~~i~~D   76 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMD-YVYIPVD   76 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCE-EEECCCC
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCe-EEEecCC
Confidence            34789999999999999999988755432   346677777887 8887776

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=95.58  E-value=0.012  Score=49.78  Aligned_cols=42  Identities=17%  Similarity=0.275  Sum_probs=35.6

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      -.|++++|+|+++|+|...+......|++|+++++++++.+.
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~  268 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEI  268 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHH
Confidence            358899999999999999988888899999988887665543

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.57  E-value=0.033  Score=44.82  Aligned_cols=46  Identities=11%  Similarity=0.175  Sum_probs=40.4

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM  144 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~e  144 (159)
                      ++||.++|.|+++-.|+.+|..|.+.|++|.++.++.+.+++..++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~~~~  193 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSMTRS  193 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHHH
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHhhcc
Confidence            7899999999999999999999999999999998877776665443

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.55  E-value=0.015  Score=46.40  Aligned_cols=40  Identities=20%  Similarity=0.295  Sum_probs=35.0

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      |+ ++|+|+++++|...++.....|++|+.+++++++.+.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~  187 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL  187 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            56 99999999999998888888999999999988876554

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=95.44  E-value=0.021  Score=46.73  Aligned_cols=39  Identities=15%  Similarity=0.297  Sum_probs=32.7

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .|++++|+|+++|+|...++.+...|++|+.++ ++++.+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~  221 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASE  221 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHH
Confidence            588999999999999999888888999998887 444433

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=95.43  E-value=0.037  Score=44.97  Aligned_cols=52  Identities=12%  Similarity=0.210  Sum_probs=36.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK  151 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~  151 (159)
                      .|++++|.|+++++|...+.-....|++++.+.++.++.++..+..++.|..
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~  218 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAE  218 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCc
Confidence            5889999999999999887776678999887665544333333344445544

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.36  E-value=0.036  Score=44.84  Aligned_cols=46  Identities=20%  Similarity=0.194  Sum_probs=39.8

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .+++||.++|.|.++=.|+.+|..|.+.|++|.++.+....+++..
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~~~  202 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHV  202 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHHHH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHHHh
Confidence            4688999999999988999999999999999999988666665543

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.25  E-value=0.019  Score=44.86  Aligned_cols=46  Identities=22%  Similarity=0.377  Sum_probs=39.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      +++| .+.|.|+ |++|+++++.|.+.|++|.+++|+.++.+++.++.
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            5677 8889986 77999999999999999999999988777776553

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.23  E-value=0.0078  Score=47.70  Aligned_cols=45  Identities=20%  Similarity=0.375  Sum_probs=38.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      ++.++.+.|.|+ |++|+++++.|.+.|++|.+++|+.++.+++.+
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~  170 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQ  170 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTT
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH
Confidence            466889999996 799999999999999999999999877666543

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.21  E-value=0.049  Score=44.09  Aligned_cols=47  Identities=17%  Similarity=0.113  Sum_probs=41.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .++.||.++|.|++.-+|+.+|..|.+.|++|.++.++.+.+++...
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~  201 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVE  201 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHH
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHhc
Confidence            36889999999999889999999999999999999988777665544

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=95.18  E-value=0.016  Score=46.93  Aligned_cols=40  Identities=15%  Similarity=0.147  Sum_probs=34.7

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~  140 (159)
                      .|++++|+|+ +++|...++.+...|+ +|+.+++++++.+.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~  207 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRREL  207 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            7899999999 9999999988888999 89999998765443

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=95.14  E-value=0.022  Score=46.60  Aligned_cols=42  Identities=17%  Similarity=0.192  Sum_probs=36.1

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .|++++|+|+ +|+|...++.+...|++|+.+++++++.+...
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~  228 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL  228 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            5789999995 99999999888889999999999887766543

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.11  E-value=0.04  Score=44.57  Aligned_cols=46  Identities=17%  Similarity=0.254  Sum_probs=39.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .+++||.++|.|.++=.|+.+|..|.+.|++|.++.++...+++..
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~  202 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHT  202 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHhc
Confidence            3689999999999888999999999999999999988766665443

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.04  E-value=0.047  Score=44.43  Aligned_cols=43  Identities=14%  Similarity=0.250  Sum_probs=37.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .+++||.++|.|.++=.|+.+|..|.+.|++|.++.+....++
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~  203 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED  203 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence            4688999999999888999999999999999999988655444

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=95.04  E-value=0.029  Score=45.71  Aligned_cols=41  Identities=12%  Similarity=0.110  Sum_probs=35.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|+|+ +++|...++.....|++|+.+++++++.+.+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~  219 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA  219 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            4789999999 9999998887778899999999988876544

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.00  E-value=0.044  Score=44.65  Aligned_cols=46  Identities=11%  Similarity=0.187  Sum_probs=40.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .++.||.++|.|++.-+|+.+|..|.+.|++|.+++++.+.+++..
T Consensus       161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~  206 (301)
T 1a4i_A          161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEV  206 (301)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHHHh
Confidence            3688999999999999999999999999999999988776665544

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=94.99  E-value=0.033  Score=44.33  Aligned_cols=45  Identities=11%  Similarity=0.282  Sum_probs=39.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei  145 (159)
                      .++.++|-|+ ||.|++++..|++.|+ +|.++.|+.++.+++++++
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            4678888885 8999999999999997 7999999998888888766

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=94.97  E-value=0.032  Score=44.58  Aligned_cols=43  Identities=12%  Similarity=0.162  Sum_probs=37.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      .++.|+++.|.|+ |++|+++++.+...|++|.+.+|+.++.++
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~  195 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR  195 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            4688999999996 899999999999999999999998765443

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=94.90  E-value=0.039  Score=44.44  Aligned_cols=40  Identities=20%  Similarity=0.351  Sum_probs=33.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      .|++++|+|+ +|+|...++.....|++|+.+++++++.+.
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~  205 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNL  205 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            5789999986 899999888888899999999998766553

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=94.90  E-value=0.035  Score=43.92  Aligned_cols=43  Identities=19%  Similarity=0.336  Sum_probs=35.3

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      +.+.|-|+ |.+|.++|..+++.|++|++.|++++.+++..+.+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i   47 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRF   47 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence            44555554 78999999999999999999999998877776653

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=94.87  E-value=0.03  Score=45.26  Aligned_cols=34  Identities=24%  Similarity=0.301  Sum_probs=30.6

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCC-------EEEEEcCCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKV-------TLVCWDIDE  135 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga-------~Vvi~~r~~  135 (159)
                      ..++||||+|.||..++..|.++|.       +|++.|+++
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~   45 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ   45 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence            3699999999999999999999996       799999864

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=94.81  E-value=0.047  Score=44.17  Aligned_cols=41  Identities=17%  Similarity=0.293  Sum_probs=35.1

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|.|+ +++|...+......|++|+.+++++++.+.+
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  216 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA  216 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            5789999987 8999998888888999999999998876644

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=94.74  E-value=0.04  Score=43.88  Aligned_cols=42  Identities=12%  Similarity=0.178  Sum_probs=36.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .++.||++.|.|. |++|+++++.+...|++|++.+|+.++.+
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~  192 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLA  192 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            3678999999985 89999999999999999999999876544

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=94.69  E-value=0.022  Score=43.03  Aligned_cols=40  Identities=18%  Similarity=0.241  Sum_probs=34.6

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .++|.|+ |.+|..+++.|.++|.+|+++++++++.++..+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~   41 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAK   41 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            4788896 889999999999999999999999887766543

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=94.68  E-value=0.032  Score=45.51  Aligned_cols=40  Identities=8%  Similarity=0.108  Sum_probs=34.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      .|++++|+| ++++|...+......|++|+.+++++++.+.
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~  228 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR  228 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH
Confidence            588999999 8999999988888899999999988766544

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=94.63  E-value=0.037  Score=44.85  Aligned_cols=40  Identities=20%  Similarity=0.169  Sum_probs=33.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      .|++++|+|+ +|+|...++.....|++|+.+++++++.+.
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~  207 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEV  207 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            4789999996 899999888877899998888888765443

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=94.63  E-value=0.084  Score=41.31  Aligned_cols=52  Identities=27%  Similarity=0.300  Sum_probs=41.1

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCC-------------------ccHHHHHHHHHHcCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDE-------------------KGNNETKQMLEEQGY  150 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~-------------------~~~~~~~~ei~~~g~  150 (159)
                      .++++.++|-|+ +|+|.++++.|++.|. ++.++|.+.                   .+.+.+++.+++.+.
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np   96 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNP   96 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCT
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCC
Confidence            356788999987 8899999999999997 678886643                   567778888877654

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=94.63  E-value=0.026  Score=46.23  Aligned_cols=36  Identities=22%  Similarity=0.344  Sum_probs=30.1

Q ss_pred             CCCCe-EEEeCCCC-----------------C-chHHHHHHHHHCCCEEEEEcCC
Q psy2040          99 LEGEI-ILLTGAGN-----------------G-IGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        99 l~gk~-~lITG~s~-----------------G-IG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      +.||. ++||+|..                 | .|.++|+.++++|+.|+++.+.
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~   88 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA   88 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence            45666 88888766                 7 9999999999999999987763

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=94.40  E-value=0.066  Score=44.14  Aligned_cols=49  Identities=20%  Similarity=0.293  Sum_probs=41.4

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      +.++.+.|+|++|.+|..+|..++..|.  +|++.|+++++++..+.+++.
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~   56 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRH   56 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhh
Confidence            4567899999999999999999999984  799999998877776666654

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=94.37  E-value=0.034  Score=45.53  Aligned_cols=41  Identities=17%  Similarity=0.239  Sum_probs=32.9

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHH-CCCEEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQ-HKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~-~Ga~Vvi~~r~~~~~~~  140 (159)
                      .|++++|+||++++|...+.-... .|++|+.+++++++.+.
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~  212 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEW  212 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence            588999999999999887655544 58999999998765543

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=94.32  E-value=0.011  Score=46.77  Aligned_cols=42  Identities=14%  Similarity=0.218  Sum_probs=35.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNET  141 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~  141 (159)
                      ++++ .+++.|+ ||.|++++..|++.|+ +|.+++|+.++++++
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            4567 8888886 8999999999999998 899999998776654

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=94.31  E-value=0.038  Score=44.62  Aligned_cols=40  Identities=13%  Similarity=0.219  Sum_probs=33.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHC--CCEEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~--Ga~Vvi~~r~~~~~~~  140 (159)
                      .|++++|+|+ +++|...++.....  |++|+.+++++++.+.
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~  211 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDF  211 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHH
Confidence            5889999999 89999888777777  9999999988765443

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=94.24  E-value=0.069  Score=43.80  Aligned_cols=41  Identities=17%  Similarity=0.237  Sum_probs=34.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|.|+ +++|...++.....|++|+.+++++++.+.+
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a  234 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA  234 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            4789999997 8899998887778999999999988776644

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=94.13  E-value=0.099  Score=42.59  Aligned_cols=43  Identities=14%  Similarity=0.202  Sum_probs=36.3

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei  145 (159)
                      ..+.|.|+ |.+|..+|..++..|. +|++.|+++++++....++
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l   53 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDL   53 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHH
Confidence            46788887 9999999999999997 9999999998877754444

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=94.13  E-value=0.073  Score=44.10  Aligned_cols=43  Identities=9%  Similarity=0.131  Sum_probs=37.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .+.+++++|.|+ |++|...++.+...|++|+++|+++++.+..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            567999999996 8999999999999999999999998776544

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=94.12  E-value=0.063  Score=42.69  Aligned_cols=40  Identities=8%  Similarity=0.071  Sum_probs=34.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|.|+ +++|...+.-....|++|+.++ ++++.+.+
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~  181 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA  181 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH
Confidence            5889999999 9999988877777899999999 77766544

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=94.11  E-value=0.068  Score=42.43  Aligned_cols=41  Identities=20%  Similarity=0.183  Sum_probs=34.3

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      +.+.|-|+ |.+|..+|..+++.|++|+++|+++++.++..+
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~   56 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   56 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            45667776 889999999999999999999999887766543

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=94.02  E-value=0.047  Score=44.47  Aligned_cols=40  Identities=18%  Similarity=0.344  Sum_probs=33.1

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~~~~~~  140 (159)
                      .|++++|+|+ +|+|...+.-.... |++|+.+++++++.+.
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~  226 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKL  226 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH
Confidence            4789999999 89999888776677 9999999988765443

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=94.00  E-value=0.086  Score=43.02  Aligned_cols=41  Identities=15%  Similarity=0.223  Sum_probs=34.1

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|+| ++++|...++.....|+ +|+.+++++++.+.+
T Consensus       191 ~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  232 (374)
T 2jhf_A          191 QGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKA  232 (374)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            578999999 58999998888888999 799999888776543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=93.98  E-value=0.077  Score=44.47  Aligned_cols=43  Identities=9%  Similarity=0.095  Sum_probs=37.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .+.+++++|.|+ |++|...++.+...|++|+++|++.++.++.
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            367899999996 8999999999999999999999998776554

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=93.92  E-value=0.089  Score=42.90  Aligned_cols=41  Identities=10%  Similarity=0.170  Sum_probs=34.1

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|+|+ +++|...+......|+ +|+.+++++++.+.+
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  233 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA  233 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            5789999995 8999998887778999 799999888776543

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=93.87  E-value=0.062  Score=43.66  Aligned_cols=46  Identities=17%  Similarity=0.193  Sum_probs=37.2

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCC-------EEEEEcCC----CccHHHHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKV-------TLVCWDID----EKGNNETKQMLEE  147 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga-------~Vvi~~r~----~~~~~~~~~ei~~  147 (159)
                      ..+.|||++|.+|..++..++.+|.       .|++.|++    +++.+..+.++..
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~   62 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDD   62 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhh
Confidence            4799999999999999999999885       79999998    5555555555544

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=93.85  E-value=0.059  Score=43.07  Aligned_cols=35  Identities=17%  Similarity=0.360  Sum_probs=30.9

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      .|++++|+||++++|...+......|++|+.++++
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~  186 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK  186 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc
Confidence            57899999999999999998888899999887743

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=93.85  E-value=0.31  Score=39.51  Aligned_cols=42  Identities=14%  Similarity=0.209  Sum_probs=36.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      ..+.|+++-|-|. |.||+++|+.+...|++|++.+++.++.+
T Consensus       151 ~~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~  192 (330)
T 2gcg_A          151 YGLTQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPE  192 (330)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHH
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchh
Confidence            4578999999886 99999999999999999999998876544

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=93.78  E-value=0.035  Score=44.80  Aligned_cols=37  Identities=24%  Similarity=0.271  Sum_probs=32.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCcc
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKG  137 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~  137 (159)
                      .|++++|+|+ +|+|...++.....|+ +|+.+++++++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~  201 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYR  201 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH
Confidence            6889999999 9999999888888999 89999887654

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=93.76  E-value=0.099  Score=42.66  Aligned_cols=41  Identities=12%  Similarity=0.129  Sum_probs=33.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|+|+ +++|...+......|+ +|+.+++++++.+.+
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  236 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA  236 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            5789999995 8999998887778899 799999888775543

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=93.67  E-value=0.1  Score=42.11  Aligned_cols=46  Identities=17%  Similarity=0.304  Sum_probs=39.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHC--CCEEEEEcCCCccHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~--Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .++.||.++|.|++.=+|+.+|..|.+.  |++|.++.++.+.+++..
T Consensus       154 i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~~~~  201 (281)
T 2c2x_A          154 ISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLPALT  201 (281)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHHHHH
Confidence            3689999999999888899999999999  899999988776665544

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=93.65  E-value=0.12  Score=41.68  Aligned_cols=54  Identities=15%  Similarity=0.305  Sum_probs=43.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCC------------------ccHHHHHHHHHHcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDE------------------KGNNETKQMLEEQGYK  151 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~------------------~~~~~~~~ei~~~g~~  151 (159)
                      ..++++.++|-|+ +|+|.++++.|++.|. ++.++|.+.                  .+.+.+++.+++.+..
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~  104 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPD  104 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTT
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCC
Confidence            4567788888876 8999999999999995 788888765                  5677777888777653

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=93.57  E-value=0.14  Score=41.63  Aligned_cols=43  Identities=26%  Similarity=0.260  Sum_probs=36.1

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei  145 (159)
                      +.+.|.|+ |.+|..+|..++..|. +|++.|+++++++....++
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l   58 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDL   58 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH
Confidence            46888887 9999999999999998 9999999998877644444

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=93.57  E-value=0.077  Score=41.73  Aligned_cols=41  Identities=17%  Similarity=0.424  Sum_probs=35.4

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      +.+.+-|++|.+|..+++.|++.|.+|++++|++++.++..
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            46888898899999999999999999999999887666554

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=93.56  E-value=0.11  Score=42.43  Aligned_cols=40  Identities=5%  Similarity=-0.024  Sum_probs=32.8

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      -.|++++|.|+++++|...+......|++|+... ++++.+
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~  202 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD  202 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH
Confidence            4689999999999999998888888999988775 555443

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=93.55  E-value=0.076  Score=43.61  Aligned_cols=39  Identities=8%  Similarity=0.033  Sum_probs=33.1

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~  139 (159)
                      .|++++|+| ++|+|...++.....| ++|+.+++++++.+
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  234 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLK  234 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHH
Confidence            478999999 8999999988887889 59999998876544

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=93.53  E-value=0.093  Score=42.73  Aligned_cols=41  Identities=15%  Similarity=0.242  Sum_probs=33.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|+|+ +++|...++.....|+ +|+.+++++++.+.+
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~  231 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA  231 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            5789999995 8999998877777898 799999888775543

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=93.50  E-value=0.082  Score=45.75  Aligned_cols=42  Identities=17%  Similarity=0.297  Sum_probs=36.9

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      ...|+++.|.|. |+||+.+++.+...|++|+++++++++.+.
T Consensus       271 ~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~  312 (494)
T 3ce6_A          271 LIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQ  312 (494)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            467999999996 999999999999999999999998876544

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=93.47  E-value=0.058  Score=40.95  Aligned_cols=40  Identities=18%  Similarity=0.217  Sum_probs=32.8

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      ++.+.|.| +|.+|..+++.+++.|.+|.+++|++++.++.
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~   67 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARL   67 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            34577777 79999999999999999999999987665543

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=93.45  E-value=0.15  Score=41.56  Aligned_cols=48  Identities=25%  Similarity=0.277  Sum_probs=39.1

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      ++.+.+.|.|+ +.+|.+++..++..|. +|++.|+++++++..+.+++.
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~   53 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAE   53 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhc
Confidence            34567888898 9999999999999998 999999999887765555543

>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*

Probab=93.26  E-value=0.2  Score=40.76  Aligned_cols=47  Identities=15%  Similarity=0.232  Sum_probs=40.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .++.||.++|-|.|.=.|+.++..|.++|+.|.++......+++..+
T Consensus       175 i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T~dl~~~~~  221 (303)
T 4b4u_A          175 IEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRTQNLPELVK  221 (303)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHH
T ss_pred             CCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCCCCHHHHhh
Confidence            36899999999999999999999999999999998776666665544

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=93.25  E-value=0.096  Score=42.57  Aligned_cols=42  Identities=17%  Similarity=0.064  Sum_probs=34.7

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .|++++|+|+ +|+|...+......|++|+.+++++++.+.+.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~  221 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEAL  221 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Confidence            5789999985 99999988877778999999999887655443

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=93.23  E-value=0.077  Score=43.05  Aligned_cols=39  Identities=31%  Similarity=0.252  Sum_probs=32.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~~~~~~  139 (159)
                      .|++++|.|+ +++|...++-....|++ |+.+++++++.+
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  218 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLK  218 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            4789999998 99999988777788997 888888776544

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=93.22  E-value=0.099  Score=42.41  Aligned_cols=39  Identities=21%  Similarity=0.168  Sum_probs=32.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~  139 (159)
                      .|++++|+|+ +++|...+......|+ +|+.+++++++.+
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  210 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLS  210 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            4789999996 8999998877777899 8999988776543

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=93.14  E-value=0.11  Score=42.17  Aligned_cols=42  Identities=12%  Similarity=0.127  Sum_probs=33.2

Q ss_pred             CCCCCeEEEeCCCCCchHHH-HHHH-HHCCCE-EEEEcCCCc---cHHH
Q psy2040          98 SLEGEIILLTGAGNGIGREL-AKQF-VQHKVT-LVCWDIDEK---GNNE  140 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~i-a~~l-a~~Ga~-Vvi~~r~~~---~~~~  140 (159)
                      ++.+++++|+|+ +++|... +.-. ...|++ |+.++++++   +.+.
T Consensus       170 ~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~  217 (357)
T 2b5w_A          170 DWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDI  217 (357)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHH
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHH
Confidence            345689999999 9999988 6655 567997 999999877   5543

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=93.12  E-value=0.14  Score=41.57  Aligned_cols=35  Identities=26%  Similarity=0.357  Sum_probs=31.5

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCCCc
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHK--VTLVCWDIDEK  136 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~~  136 (159)
                      ..+.||||+|.+|..++..|+++|  ..|++.|++++
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~   45 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA   45 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc
Confidence            469999999999999999999998  78999998875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=93.06  E-value=0.12  Score=42.09  Aligned_cols=40  Identities=10%  Similarity=0.100  Sum_probs=32.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~  140 (159)
                      .|++++|+|+ +++|...+......|+ +|+.+++++++.+.
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  231 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPK  231 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            5789999995 8999988877777898 79899988876554

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=93.02  E-value=0.085  Score=40.09  Aligned_cols=43  Identities=14%  Similarity=0.251  Sum_probs=36.3

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEE-EcCCCccHHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVC-WDIDEKGNNETKQML  145 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi-~~r~~~~~~~~~~ei  145 (159)
                      +.+.|.| +|.+|.+++..|++.|.+|.+ ++|++++.++..++.
T Consensus        24 mkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~   67 (220)
T 4huj_A           24 TTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF   67 (220)
T ss_dssp             CCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh
Confidence            4567777 689999999999999999998 899998888776654

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=93.00  E-value=0.077  Score=43.42  Aligned_cols=39  Identities=21%  Similarity=0.291  Sum_probs=33.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~  139 (159)
                      .|++++|.|+ +++|...+......|+ +|+.+++++++.+
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~  232 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYE  232 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            5789999998 9999998877778898 7999998887655

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=93.00  E-value=0.069  Score=40.61  Aligned_cols=39  Identities=10%  Similarity=0.096  Sum_probs=32.4

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .+.++|.|+ +.+|+.+++.|.+.|. |++++++++..++.
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~   47 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVL   47 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHH
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHH
Confidence            457888887 8999999999999999 99999988765543

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=92.98  E-value=0.13  Score=42.75  Aligned_cols=39  Identities=28%  Similarity=0.400  Sum_probs=34.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      ++.||++.|.| .+.+|...|+.+.+.|++|++.|.+.++
T Consensus       172 ~L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~  210 (355)
T 1c1d_A          172 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTER  210 (355)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence            68899999996 4899999999999999999999987654

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=92.96  E-value=0.11  Score=42.93  Aligned_cols=40  Identities=15%  Similarity=0.223  Sum_probs=33.1

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNN  139 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~  139 (159)
                      -.|++++|+|+ +++|...+.-....|+ +|+.+++++++.+
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  252 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRN  252 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            35889999998 8999998877778899 8988888876554

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=92.95  E-value=0.66  Score=37.27  Aligned_cols=40  Identities=25%  Similarity=0.292  Sum_probs=35.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      ..+.|+++-|-|. |.||+++|+.+...|++|+..+++.+.
T Consensus       138 ~~l~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~  177 (307)
T 1wwk_A          138 IELEGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE  177 (307)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             cccCCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            4678999988865 999999999999999999999998764

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=92.93  E-value=0.12  Score=41.46  Aligned_cols=45  Identities=16%  Similarity=0.218  Sum_probs=35.9

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCC--EEEEEcC--CCccHHHHHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKV--TLVCWDI--DEKGNNETKQMLEE  147 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r--~~~~~~~~~~ei~~  147 (159)
                      .+.||||+|.+|..++..++.+|.  .+++.|+  ++++++....++..
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~   50 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNH   50 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHH
Confidence            588999999999999999998875  6888999  77666554555543

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=92.93  E-value=0.12  Score=42.26  Aligned_cols=49  Identities=18%  Similarity=0.266  Sum_probs=40.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      +..++.+.|+|+ |++|..++..++..|.  ++++.|+++++++..+.+++.
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~   56 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLED   56 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhh
Confidence            345677899996 9999999999999886  899999998888877777754

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=92.86  E-value=0.71  Score=37.17  Aligned_cols=40  Identities=20%  Similarity=0.272  Sum_probs=35.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      ..+.|+++-|-|. |.||+++|+.+...|++|+..+++.+.
T Consensus       138 ~~l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~  177 (313)
T 2ekl_A          138 LELAGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDILDIR  177 (313)
T ss_dssp             CCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCcch
Confidence            4688999988865 999999999999999999999998764

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=92.84  E-value=0.067  Score=45.60  Aligned_cols=41  Identities=24%  Similarity=0.332  Sum_probs=35.5

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM  144 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~e  144 (159)
                      .++|.|+ |..|..+|+.|.++|.+|++.|.++++++++.++
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~   45 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDK   45 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh
Confidence            5778877 7899999999999999999999999887776554

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=92.82  E-value=0.15  Score=40.09  Aligned_cols=35  Identities=11%  Similarity=0.196  Sum_probs=30.8

Q ss_pred             CCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         109 AGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       109 ~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      |.|.+|..++..|++.|++|.+++|++++.++..+
T Consensus         8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   42 (287)
T 3pdu_A            8 GLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVA   42 (287)
T ss_dssp             CCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHH
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence            46899999999999999999999999988776544

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=92.80  E-value=0.12  Score=42.22  Aligned_cols=39  Identities=13%  Similarity=0.097  Sum_probs=32.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~  139 (159)
                      .|++++|.|+ +++|...+.-....|+ +|+.+++++++.+
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  221 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR  221 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            4789999997 8999998877778999 8888888876544

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=92.73  E-value=0.14  Score=43.40  Aligned_cols=35  Identities=17%  Similarity=0.243  Sum_probs=31.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEE-EEcC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLV-CWDI  133 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vv-i~~r  133 (159)
                      +++||++.|+| .+..|...|+.|.+.|++|+ +.|.
T Consensus       215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~  250 (419)
T 3aoe_E          215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATS  250 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcC
Confidence            67899999998 68889999999999999988 7787

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=92.69  E-value=0.068  Score=43.93  Aligned_cols=41  Identities=20%  Similarity=0.276  Sum_probs=33.1

Q ss_pred             CCCeEEEeC-CCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         100 EGEIILLTG-AGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG-~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      .|++++|.| |++++|...+.-....|++|+.+++++++.+.
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~  211 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADL  211 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            367788886 89999998887777789999999887765443

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=92.68  E-value=0.17  Score=40.40  Aligned_cols=40  Identities=10%  Similarity=0.222  Sum_probs=33.2

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      +.+-|-| .|.+|..+|..|++.|++|.+.+|++++.+++.
T Consensus        22 ~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~   61 (310)
T 3doj_A           22 MEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELV   61 (310)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            3455555 588999999999999999999999998877654

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=92.64  E-value=0.12  Score=44.50  Aligned_cols=40  Identities=13%  Similarity=0.277  Sum_probs=35.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      ..+.||++.|.|. |.||+.+|+.+...|++|+++++++..
T Consensus       243 ~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~  282 (464)
T 3n58_A          243 VMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPIC  282 (464)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcch
Confidence            3578999999996 569999999999999999999987654

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=92.58  E-value=0.14  Score=44.08  Aligned_cols=42  Identities=12%  Similarity=0.273  Sum_probs=34.9

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      |+.+|  |+|-+|.++|..+++.|.+|++.|++++.+++..+.+
T Consensus         7 kVgVI--GaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i   48 (483)
T 3mog_A            7 TVAVI--GSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGI   48 (483)
T ss_dssp             CEEEE--CCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHH
T ss_pred             EEEEE--CcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Confidence            44554  4588999999999999999999999998888776654

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=92.55  E-value=0.28  Score=40.16  Aligned_cols=37  Identities=22%  Similarity=0.339  Sum_probs=34.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      ++.|+.++|-|++.=+|+.+|+.|++.|++|.+++|+
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~  210 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN  210 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence            6889999999998888999999999999999999886

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=92.55  E-value=0.24  Score=40.25  Aligned_cols=46  Identities=26%  Similarity=0.306  Sum_probs=38.2

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      .+.+.|.| +|.+|.+++..++..|. ++++.|+++++++..+.+++.
T Consensus         5 ~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~   51 (321)
T 3p7m_A            5 RKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQ   51 (321)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHT
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHh
Confidence            35677778 59999999999999887 999999999888766666654

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=92.52  E-value=0.15  Score=41.68  Aligned_cols=44  Identities=18%  Similarity=0.308  Sum_probs=34.7

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLE  146 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~  146 (159)
                      +.+-|-|+ |-+|..+|..++..|++|.+.|.+++.+++..+.++
T Consensus         7 ~~VaViGa-G~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   50 (319)
T 3ado_A            7 GDVLIVGS-GLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIR   50 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHH
T ss_pred             CeEEEECC-cHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHH
Confidence            34555555 789999999999999999999999887666555443

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=92.50  E-value=0.48  Score=40.78  Aligned_cols=42  Identities=17%  Similarity=0.154  Sum_probs=34.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      ..++++|.|. +..|..+++.|.+.|.++++++.+++..++..
T Consensus       126 ~~~hviI~G~-g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~  167 (565)
T 4gx0_A          126 TRGHILIFGI-DPITRTLIRKLESRNHLFVVVTDNYDQALHLE  167 (565)
T ss_dssp             CCSCEEEESC-CHHHHHHHHHTTTTTCCEEEEESCHHHHHHHH
T ss_pred             cCCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence            4567888887 57999999999999999999999987655543

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=92.50  E-value=1.2  Score=36.65  Aligned_cols=41  Identities=27%  Similarity=0.313  Sum_probs=35.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      ..+.||++-|-|. |.||+++|+.+...|++|+..+|+....
T Consensus       160 ~~l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~  200 (351)
T 3jtm_A          160 YDLEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAP  200 (351)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCH
T ss_pred             ccccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCH
Confidence            4688999999976 7899999999999999999999876443

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=92.48  E-value=0.24  Score=40.89  Aligned_cols=53  Identities=15%  Similarity=0.154  Sum_probs=42.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCC-------------------ccHHHHHHHHHHcCCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDE-------------------KGNNETKQMLEEQGYK  151 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~-------------------~~~~~~~~ei~~~g~~  151 (159)
                      .++++.++|-|+ ||+|.++++.|+..|. ++.++|.+.                   .+.+.+++.+++.++.
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~  103 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL  103 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCC
Confidence            467888999877 8999999999999996 688887753                   4567777888777653

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=92.40  E-value=0.25  Score=40.09  Aligned_cols=44  Identities=25%  Similarity=0.298  Sum_probs=37.1

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLE  146 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~  146 (159)
                      +.+.|.|+ |.+|..++..++..|. +|++.|+++++++....+++
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~   49 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTS   49 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHH
Confidence            46778887 9999999999999997 89999999988876666554

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=92.39  E-value=0.15  Score=42.71  Aligned_cols=44  Identities=9%  Similarity=0.127  Sum_probs=38.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .+.++.++|.|+ |.+|...++.+...|++|.++|++.++.+++.
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  224 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR  224 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            356889999998 79999999999999999999999988766554

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=92.39  E-value=0.2  Score=40.66  Aligned_cols=46  Identities=20%  Similarity=0.210  Sum_probs=36.7

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC--CccHHHHHHHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID--EKGNNETKQML  145 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~--~~~~~~~~~ei  145 (159)
                      ++.+.+.|.|+ +.+|..+|..++..|. +|++.|++  +++.+..+.++
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl   54 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDM   54 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhH
Confidence            45677889996 9999999999999998 99999998  55555444444

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=92.33  E-value=0.22  Score=39.92  Aligned_cols=40  Identities=23%  Similarity=0.292  Sum_probs=34.3

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETK  142 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~  142 (159)
                      +.+.|.|+ |.+|..++..+++.|. +|++.|+++++++...
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~   45 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKA   45 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHH
Confidence            46778887 8999999999999998 9999999988777643

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=92.33  E-value=0.14  Score=43.61  Aligned_cols=41  Identities=12%  Similarity=0.199  Sum_probs=35.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      ..+.||+++|.|. |.||+.+|+.+...|++|+++++++.+.
T Consensus       216 ~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra  256 (435)
T 3gvp_A          216 MMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICA  256 (435)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             ceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhh
Confidence            3578999999998 5699999999999999999999987543

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=92.30  E-value=0.98  Score=36.66  Aligned_cols=40  Identities=28%  Similarity=0.523  Sum_probs=35.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      ..+.|+++-|-|. |.||+++|+.+.+.|++|+..+++.+.
T Consensus       142 ~~l~g~~vgIIG~-G~iG~~vA~~l~~~G~~V~~~d~~~~~  181 (333)
T 2d0i_A          142 ESLYGKKVGILGM-GAIGKAIARRLIPFGVKLYYWSRHRKV  181 (333)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCH
T ss_pred             CCCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCcch
Confidence            4688999999875 999999999999999999999998764

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=92.25  E-value=0.15  Score=41.04  Aligned_cols=43  Identities=14%  Similarity=0.160  Sum_probs=33.7

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCC--EEEEEcC--CCccHHHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKV--TLVCWDI--DEKGNNETKQML  145 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r--~~~~~~~~~~ei  145 (159)
                      .+.|||++|.+|..++..++.+|.  .+++.|+  ++++++..+.++
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl   48 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDI   48 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHH
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHH
Confidence            589999999999999999998884  5888998  665455444444

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=92.15  E-value=0.17  Score=39.54  Aligned_cols=40  Identities=18%  Similarity=0.154  Sum_probs=32.9

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .+.|-|+ |.+|..++..|++.|.+|.+++|++++.++..+
T Consensus         5 ~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~   44 (316)
T 2ew2_A            5 KIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRK   44 (316)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             eEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh
Confidence            4666675 899999999999999999999998876665543

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=92.15  E-value=0.15  Score=40.49  Aligned_cols=40  Identities=8%  Similarity=0.067  Sum_probs=32.4

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .+-|- |.|.+|..++..|++.|.+|.+++|++++.+++.+
T Consensus         9 ~I~iI-G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   48 (303)
T 3g0o_A            9 HVGIV-GLGSMGMGAARSCLRAGLSTWGADLNPQACANLLA   48 (303)
T ss_dssp             EEEEE-CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             eEEEE-CCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence            34444 46899999999999999999999999877666543

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=92.15  E-value=0.19  Score=41.02  Aligned_cols=46  Identities=20%  Similarity=0.260  Sum_probs=39.1

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      .+.+.|.|+ |.+|..++..++..|.  ++++.|+++++++..+.+++.
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~   52 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNH   52 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHh
Confidence            456888995 9999999999999986  899999998888877777764

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=92.14  E-value=0.2  Score=39.75  Aligned_cols=40  Identities=13%  Similarity=0.186  Sum_probs=32.9

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .+-|-| .|.+|..+|..|++.|++|.+++|++++.++..+
T Consensus        17 ~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~   56 (296)
T 3qha_A           17 KLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE   56 (296)
T ss_dssp             CEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH
T ss_pred             eEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            344445 6899999999999999999999999988776543

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=92.12  E-value=0.19  Score=40.63  Aligned_cols=46  Identities=24%  Similarity=0.400  Sum_probs=37.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLE  146 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~  146 (159)
                      +...+.|.|+ |.+|..++..++.+|.  .+++.|+++++++..+.++.
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~   52 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLK   52 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHH
Confidence            3457888898 9999999999998884  89999999877776555554

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=92.08  E-value=0.11  Score=42.80  Aligned_cols=40  Identities=18%  Similarity=0.176  Sum_probs=32.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~  140 (159)
                      .|++++|.|+ +++|...+......|+ +|+.+++++++.+.
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  225 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKL  225 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence            5789999996 9999988777667899 89999988766543

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=91.98  E-value=0.12  Score=39.81  Aligned_cols=39  Identities=21%  Similarity=0.264  Sum_probs=31.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      ++.++.+-|-| .|.+|.++|+.|++.|++|.+.+|++++
T Consensus        16 ~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           16 YFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            45667776665 7999999999999999999999998765

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=91.94  E-value=0.27  Score=39.48  Aligned_cols=45  Identities=24%  Similarity=0.219  Sum_probs=37.8

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      +.+.|.|+ |.+|..++..++..|. +|++.|+++++++..+.++..
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~   48 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYE   48 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHH
Confidence            46888998 9999999999999996 899999999888766666643

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=91.91  E-value=0.25  Score=40.42  Aligned_cols=49  Identities=16%  Similarity=0.190  Sum_probs=41.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      ....+.+.|.|+ |++|..++..++.+|.  ++++.|+++++++..+.+++.
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~   66 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH   66 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhh
Confidence            345678889997 8999999999999997  899999998888887777764

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=91.88  E-value=0.65  Score=37.79  Aligned_cols=40  Identities=20%  Similarity=0.355  Sum_probs=34.8

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ...+.||++-|-|. |.||+++|+.+...|++|+..+|+.+
T Consensus       132 ~~~l~gktvGIiGl-G~IG~~vA~~l~~~G~~V~~~dr~~~  171 (324)
T 3evt_A          132 TSTLTGQQLLIYGT-GQIGQSLAAKASALGMHVIGVNTTGH  171 (324)
T ss_dssp             CCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             CccccCCeEEEECc-CHHHHHHHHHHHhCCCEEEEECCCcc
Confidence            34688999998876 89999999999999999999998754

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=91.80  E-value=0.16  Score=41.39  Aligned_cols=40  Identities=15%  Similarity=0.072  Sum_probs=32.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~  140 (159)
                      .|++++|+|+ +++|...+......|+ +|+.+++++++.+.
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~  230 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLEL  230 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            4789999985 8999988877777898 68888888766543

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=91.76  E-value=0.86  Score=36.52  Aligned_cols=39  Identities=21%  Similarity=0.331  Sum_probs=34.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ..+.||++-|-|. |.||+++|+.+...|++|+..+|+.+
T Consensus       118 ~~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~  156 (290)
T 3gvx_A          118 TLLYGKALGILGY-GGIGRRVAHLAKAFGMRVIAYTRSSV  156 (290)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCC
T ss_pred             eeeecchheeecc-CchhHHHHHHHHhhCcEEEEEecccc
Confidence            4588999988876 89999999999999999999998754

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=91.69  E-value=0.2  Score=41.12  Aligned_cols=40  Identities=13%  Similarity=0.190  Sum_probs=31.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~  140 (159)
                      .|++++|.| ++++|...+.-....|+ +|+.+++++++.+.
T Consensus       185 ~g~~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~  225 (398)
T 1kol_A          185 PGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAH  225 (398)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHH
Confidence            578999999 49999988777777898 68888888765443

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=91.65  E-value=1.4  Score=36.10  Aligned_cols=39  Identities=18%  Similarity=0.236  Sum_probs=34.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ..+.||++-|-|. |.||+++|+.+...|++|+..+++..
T Consensus       169 ~~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~  207 (345)
T 4g2n_A          169 MGLTGRRLGIFGM-GRIGRAIATRARGFGLAIHYHNRTRL  207 (345)
T ss_dssp             CCCTTCEEEEESC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             cccCCCEEEEEEe-ChhHHHHHHHHHHCCCEEEEECCCCc
Confidence            4688999999985 89999999999999999999999754

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=91.59  E-value=0.22  Score=39.84  Aligned_cols=41  Identities=20%  Similarity=0.375  Sum_probs=33.5

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      ..+.|-|+ |.+|..++..|++.|.+|.+++|++++.++..+
T Consensus         5 mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~   45 (359)
T 1bg6_A            5 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   45 (359)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHh
Confidence            35666675 899999999999999999999998877665544

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=91.57  E-value=0.28  Score=38.41  Aligned_cols=40  Identities=18%  Similarity=0.298  Sum_probs=33.1

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .+-|-| .|.+|..++..|++.|++|.+++|++++.++..+
T Consensus         3 ~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   42 (287)
T 3pef_A            3 KFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA   42 (287)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH
T ss_pred             EEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence            445555 5899999999999999999999999888776543

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=91.56  E-value=1.4  Score=35.30  Aligned_cols=38  Identities=18%  Similarity=0.295  Sum_probs=33.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .+.||++-|-|. |.||+++|+.+...|++|+..+|+.+
T Consensus       121 ~l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~dr~~~  158 (303)
T 1qp8_A          121 LIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK  158 (303)
T ss_dssp             CCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CCCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCcc
Confidence            688999988865 99999999999999999999998754

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=91.53  E-value=0.23  Score=39.85  Aligned_cols=41  Identities=15%  Similarity=0.311  Sum_probs=33.3

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .+.+-|-| .|.+|..+++.|++.|++|.+++|++++.+++.
T Consensus        31 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~   71 (320)
T 4dll_A           31 ARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLA   71 (320)
T ss_dssp             CSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH
Confidence            34555554 589999999999999999999999987766554

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=91.52  E-value=0.15  Score=41.19  Aligned_cols=39  Identities=8%  Similarity=0.071  Sum_probs=31.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~  139 (159)
                      .|++++|.|+ +++|...+......|+ +|+.+++++++.+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~  205 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCD  205 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence            4788999985 8999988877777898 7999998876543

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=91.46  E-value=0.27  Score=39.61  Aligned_cols=40  Identities=18%  Similarity=0.302  Sum_probs=33.5

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNET  141 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~  141 (159)
                      .+.+.|-| .|.+|..+++.|.+.|.  +|+++||+++..++.
T Consensus        33 ~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a   74 (314)
T 3ggo_A           33 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA   74 (314)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH
T ss_pred             CCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHH
Confidence            35677777 69999999999999999  999999998766554

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=91.41  E-value=1.2  Score=36.71  Aligned_cols=41  Identities=24%  Similarity=0.403  Sum_probs=35.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCCCccH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGN  138 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~~~~~  138 (159)
                      ..+.|+++-|-|. |.||+++|+.+...|++ |+..+++....
T Consensus       160 ~~l~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~~~~~  201 (364)
T 2j6i_A          160 YDIEGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQALPK  201 (364)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSSCCCH
T ss_pred             ccCCCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCCccch
Confidence            4688999999875 99999999999999997 99999876543

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=91.40  E-value=1.1  Score=36.37  Aligned_cols=40  Identities=20%  Similarity=0.331  Sum_probs=35.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      ..+.|+++.|-|. |.||.++|+.+...|++|++.+++.+.
T Consensus       146 ~~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~  185 (334)
T 2dbq_A          146 YDVYGKTIGIIGL-GRIGQAIAKRAKGFNMRILYYSRTRKE  185 (334)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             cCCCCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEECCCcch
Confidence            4678999989885 999999999999999999999998765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	159
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	4e-13
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	5e-12
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	1e-11
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	3e-11
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	3e-11
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-11
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	4e-11
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	5e-11
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	5e-11
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	6e-11
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-11
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	6e-11
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	9e-11
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	1e-10
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-10
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-10
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	3e-10
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-10
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	5e-10
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	6e-10
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	9e-10
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	1e-09
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-09
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	1e-09
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	1e-09
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-09
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-09
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-09
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-09
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	4e-09
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	4e-09
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	4e-09
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	4e-09
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	5e-09
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	5e-09
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	6e-09
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	8e-09
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-08
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	1e-08
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-08
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-08
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	5e-08
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	6e-08
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	8e-08
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-07
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	2e-07
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-07
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-07
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-07
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	4e-07
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	6e-07
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	7e-07
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	7e-07
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-07
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	9e-07
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	1e-06
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	1e-06
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-06
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-06
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	2e-06
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	2e-06
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	3e-06
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	3e-06
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	6e-06
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	6e-06
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-06
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-06
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	3e-04
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	3e-04
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	7e-04
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	9e-04
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.001
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	0.002
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	0.003
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	0.004

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.7 bits (152), Expect = 4e-13
 Identities = 27/55 (49%), Positives = 36/55 (65%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           KS+ GEI+L+TGAG+GIGR  A +F + K  LV WDI++ G  ET    +  G K
Sbjct: 3   KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK 57

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 59.8 bits (144), Expect = 5e-12
 Identities = 13/55 (23%), Positives = 27/55 (49%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           K   G++ L+TGAG  IG   A +  +    +   D++ +   + +  + E+G +
Sbjct: 1   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE 55

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 58.5 bits (141), Expect = 1e-11
 Identities = 17/54 (31%), Positives = 29/54 (53%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
             E ++ L+TGAG GIGRE+AK   +    ++C    +K  +     ++  GY+
Sbjct: 7   CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE 60

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (138), Expect = 3e-11
 Identities = 12/60 (20%), Positives = 25/60 (41%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTY 156
           +S++G + ++TG  +G+G   A++ V    + V  D+   G     + L           
Sbjct: 1   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV 60

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 57.8 bits (139), Expect = 3e-11
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 92  IPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGY 150
           + P   SLEG++ L+TGAG GIGRE+A +  +    ++    +  +   E    +++ G 
Sbjct: 9   LGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS 68

Query: 151 K 151
            
Sbjct: 69  D 69

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 57.1 bits (137), Expect = 4e-11
 Identities = 14/56 (25%), Positives = 25/56 (44%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNI 153
           SL+G   L+TG   GIG  + ++       +     +EK  +E  ++  E+G    
Sbjct: 3   SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVE 58

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 57.1 bits (137), Expect = 4e-11
 Identities = 13/53 (24%), Positives = 23/53 (43%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
               ++L+TG G+G+GR  A +       L   D+  +G   +K  + E    
Sbjct: 2   FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD 54

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 57.0 bits (137), Expect = 5e-11
 Identities = 17/53 (32%), Positives = 30/53 (56%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           L+G+  ++TGAG GIG+E+A  F     ++V  DI+    N     +++ G +
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 57.1 bits (137), Expect = 5e-11
 Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 6/80 (7%)

Query: 84  LESILLTLIPPSEK------SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG 137
            E++      P +K      S +G++  +TG G G+G+ +           V        
Sbjct: 2   TEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDV 61

Query: 138 NNETKQMLEEQGYKNIHTYK 157
              T + +  Q    +H  +
Sbjct: 62  LKATAEQISSQTGNKVHAIQ 81

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 56.6 bits (136), Expect = 6e-11
 Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 95  SEK-SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           S++ SL+ + +L+TG   GIG  + ++F      +     +E   NE     +++G++
Sbjct: 1   SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ 58

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 56.6 bits (136), Expect = 6e-11
 Identities = 13/56 (23%), Positives = 25/56 (44%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNI 153
           +LEG   L+TG   GIG  + ++      ++     ++K  N+       +G+K  
Sbjct: 5   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVE 60

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 56.6 bits (136), Expect = 6e-11
 Identities = 13/60 (21%), Positives = 27/60 (45%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYK 157
            L G + L+TG   G+G  +A+   +   ++V    + +  +E  Q L E+       ++
Sbjct: 2   DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR 61

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 56.2 bits (135), Expect = 9e-11
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
             G+ +++TG+ NGIGR  A  F +    +     +E    ETKQ + + G  
Sbjct: 2   FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP 54

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (134), Expect = 1e-10
 Identities = 15/61 (24%), Positives = 28/61 (45%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTY 156
           + L+G+ +++TGA  GIGRE+A    +    +V     ++   +      E G  + H  
Sbjct: 10  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 69

Query: 157 K 157
            
Sbjct: 70  A 70

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (133), Expect = 2e-10
 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 1/65 (1%)

Query: 94  PSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK-N 152
           P  +     + L+TGA  GIG  +A+  VQ  + +V          E     +  GY   
Sbjct: 3   PGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGT 62

Query: 153 IHTYK 157
           +  Y+
Sbjct: 63  LIPYR 67

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 55.4 bits (133), Expect = 2e-10
 Identities = 14/56 (25%), Positives = 25/56 (44%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIH 154
              + +++TG+ NGIGR  A  F Q    +       +   ET+Q++ + G     
Sbjct: 3   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQ 58

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 54.7 bits (131), Expect = 3e-10
 Identities = 13/51 (25%), Positives = 24/51 (47%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           L+ ++ ++TG   GIG   AK FV++   +V  DI +    +    +    
Sbjct: 4   LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD 54

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 54.0 bits (129), Expect = 5e-10
 Identities = 16/52 (30%), Positives = 22/52 (42%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY 150
            EG+I L+TGA  GIGR +A+        ++     E G       L   G 
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGK 53

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 54.0 bits (129), Expect = 5e-10
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLV-CWDIDEKGNNETKQMLEEQGYKNI 153
           K L G++ L TGAG GIGR +A +  +   ++V  +    K   E    L++ G + +
Sbjct: 2   KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGV 59

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 53.8 bits (129), Expect = 6e-10
 Identities = 13/54 (24%), Positives = 23/54 (42%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKN 152
              ++ ++TG+ NGIGR  A  F +    +       +   ET+Q +   G   
Sbjct: 3   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSE 56

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 53.2 bits (127), Expect = 9e-10
 Identities = 9/60 (15%), Positives = 19/60 (31%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYK 157
           S   + I++TG   GIG    +        +           E  + + ++       Y+
Sbjct: 6   SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 53.2 bits (127), Expect = 1e-09
 Identities = 16/51 (31%), Positives = 28/51 (54%)

Query: 101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
            E+ L+TGA +GIG E+A++  +  + +      E+G   T + L E G +
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE 52

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 53.2 bits (127), Expect = 1e-09
 Identities = 19/51 (37%), Positives = 27/51 (52%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           L G+ IL+TGA +GIGR     F +   +LV  D +E+   E    LE + 
Sbjct: 3   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEA 53

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 52.8 bits (126), Expect = 1e-09
 Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 97  KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNI 153
           K LEG+++++TG+  G+G+ +A +F   K  +V      E   N   + +++ G + I
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 52.7 bits (126), Expect = 1e-09
 Identities = 10/51 (19%), Positives = 23/51 (45%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           L+G++ ++TG   GIG  +A +FV+    ++          +  + +    
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD 54

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 2e-09
 Identities = 17/57 (29%), Positives = 28/57 (49%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHT 155
           L+G++I+LT A  GIG+  A  F +    ++  DI+E    E ++    Q      T
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVT 60

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 52.3 bits (125), Expect = 2e-09
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           L+ + +L+TGA +GIGR   + F +    LV  DI+E    E  + +      
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVV 55

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (124), Expect = 2e-09
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE 147
             G+++++TG G GIG  + + FV     +V  D DE G    +Q L  
Sbjct: 4   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG 52

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 51.6 bits (123), Expect = 3e-09
 Identities = 11/51 (21%), Positives = 21/51 (41%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           L G++ L++G   G+G    +  V     +V  DI ++        L +  
Sbjct: 4   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAA 54

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 51.5 bits (123), Expect = 4e-09
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           L+G++ L+TG  +G+G E+ K  +     +   DI+E    +    L E+ 
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERS 54

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 51.7 bits (123), Expect = 4e-09
 Identities = 12/49 (24%), Positives = 23/49 (46%)

Query: 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           + L+TGAG GIG+ +A + V+    +   D ++         + + G  
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH 51

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 4e-09
 Identities = 10/56 (17%), Positives = 23/56 (41%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIH 154
           L+G++ ++TG   GIG+ + K+ ++    +V      +        L+        
Sbjct: 10  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQ 65

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (123), Expect = 4e-09
 Identities = 15/57 (26%), Positives = 25/57 (43%)

Query: 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTY 156
            G++ L+TGA  GIGR  A+  +     +   D + +   + K  L EQ       +
Sbjct: 2   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLF 58

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 51.3 bits (122), Expect = 5e-09
 Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYK 157
           L+G++ ++TG+ +GIG  +A         +V     D     + +  L  Q    +    
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 51.0 bits (121), Expect = 5e-09
 Identities = 14/51 (27%), Positives = 25/51 (49%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG 149
           L+G+  L+TG+  GIGR  A+ +V+    +   DI+ +    T   +    
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAA 53

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 50.7 bits (121), Expect = 6e-09
 Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           L+ ++ ++TG  NGIGR +A++F      +   D+      E +  +   G +
Sbjct: 3   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRR 53

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 50.8 bits (121), Expect = 8e-09
 Identities = 14/50 (28%), Positives = 26/50 (52%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ 148
           L G+ +++TG   G+G E A+Q V     +V  D+ ++    T + L + 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA 52

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 50.5 bits (119), Expect = 1e-08
 Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 99  LEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIH 154
           L+G+  L+ G  N   I   +A+       TL    ++E      + + +E     ++
Sbjct: 3   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVY 60

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.2 bits (119), Expect = 1e-08
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 3/56 (5%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHK---VTLVCWDIDEKGNNETKQMLEEQGY 150
            L   + +LTGA  G GR LA Q  +       ++     E    + K+ L  Q  
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP 58

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 49.3 bits (117), Expect = 2e-08
 Identities = 7/46 (15%), Positives = 15/46 (32%)

Query: 95  SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE 140
           ++       +L+TG   GIG  +A++       +            
Sbjct: 1   AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG 46

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 48.7 bits (116), Expect = 4e-08
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143
             G+ +L+TG   GIGR +A+ F +    +   D+  +G    + 
Sbjct: 3   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA 47

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (115), Expect = 5e-08
 Identities = 13/48 (27%), Positives = 20/48 (41%)

Query: 96  EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143
           E  L G  +L+TGAG GIGR   +        +V     +   +   +
Sbjct: 2   ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR 49

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 48.1 bits (114), Expect = 6e-08
 Identities = 14/45 (31%), Positives = 23/45 (51%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143
           L+GE +L+TG  +G+GR L  +FV     +   D   +   E + 
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELET 47

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 47.6 bits (112), Expect = 8e-08
 Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 99  LEGEIILLTGA--GNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTY 156
           L G+ IL+TG      I   +A+   +    L     ++K     ++   + G   +   
Sbjct: 3   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 62

Query: 157 KRS 159
             +
Sbjct: 63  DVA 65

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.1 bits (111), Expect = 1e-07
 Identities = 7/37 (18%), Positives = 13/37 (35%)

Query: 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK 136
           E   +L+ G    +G    + F      +   D+ E 
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN 37

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 46.8 bits (110), Expect = 2e-07
 Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 99  LEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTY 156
           L G+  L+ G  N   +G  +A +  +    +      E+   E +++ E  G   +   
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 46.6 bits (110), Expect = 2e-07
 Identities = 9/45 (20%), Positives = 18/45 (40%)

Query: 99  LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ 143
           +  + +L+  A  GIGR +A    Q    +     +E+    +  
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGH 46

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.5 bits (110), Expect = 2e-07
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 95  SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135
           S    +G ++L+TGAG G+GR  A  F +    +V  D+  
Sbjct: 1   SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGG 41

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 45.9 bits (108), Expect = 3e-07
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNI 153
           ++++TGA  GIG+ +A    +    ++       K   E  + +E  G + I
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAI 54

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 45.8 bits (108), Expect = 4e-07
 Identities = 8/60 (13%), Positives = 21/60 (35%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYK 157
            L  + ++   A  GIG + +++ V+  +         +      ++       NI  + 
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 45.0 bits (105), Expect = 6e-07
 Identities = 9/49 (18%), Positives = 15/49 (30%), Gaps = 1/49 (2%)

Query: 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK 151
           + LL G G  +G+ LA +       +V     E+               
Sbjct: 3   VALLGGTG-NLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGD 50

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 45.5 bits (106), Expect = 7e-07
 Identities = 8/59 (13%), Positives = 18/59 (30%), Gaps = 2/59 (3%)

Query: 98  SLEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIH 154
            L G+   + G  +  G G  +AK        ++        N     +   +  ++  
Sbjct: 5   DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRV 63

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.0 bits (106), Expect = 7e-07
 Identities = 12/49 (24%), Positives = 17/49 (34%)

Query: 98  SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLE 146
           +  G   L+TGAG GIGR+  K        +V             +   
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP 50

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 44.9 bits (105), Expect = 8e-07
 Identities = 5/43 (11%), Positives = 21/43 (48%)

Query: 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLE 146
           +++ G    +G  + + F ++  T++  D+      ++  +++
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD 47

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 9e-07
 Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 103 IILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQMLEEQGYK 151
           + L+TG   GIG  + +   +     +V    D        Q L+ +G  
Sbjct: 5   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLS 54

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 44.4 bits (103), Expect = 1e-06
 Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 4/58 (6%)

Query: 99  LEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIH 154
           L+G+ IL++G      I   +A+   +    LV    D       +++ +    K   
Sbjct: 4   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR--LIQRITDRLPAKAPL 59

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 44.4 bits (104), Expect = 1e-06
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN 139
            L+TG  +G+GR  A         +V  D+  +G +
Sbjct: 4   ALVTGGASGLGRAAALALKARGYRVVVLDLRREGED 39

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 44.2 bits (103), Expect = 1e-06
 Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 4/57 (7%)

Query: 104 ILLTGAGNGIGRELAKQFVQHKVTLVCW----DIDEKGNNETKQMLEEQGYKNIHTY 156
           +L+TG   G+G ++A+   +     +        D  G  E    LE  G +     
Sbjct: 12  VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 44.2 bits (104), Expect = 2e-06
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE 147
           ++T   +  G   A +  +   T+ C D   K  +E +   E 
Sbjct: 4   IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET 46

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 44.1 bits (103), Expect = 2e-06
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135
           II+++G   GIG    K        +V  DI +
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIRD 35

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 43.6 bits (102), Expect = 2e-06
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 7/56 (12%)

Query: 103 IILLTGAGNGIGRELAKQFVQH-------KVTLVCWDIDEKGNNETKQMLEEQGYK 151
           I+L+TGAG GIGR +A +F +        +  LV          +       +G  
Sbjct: 3   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL 58

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 43.5 bits (101), Expect = 3e-06
 Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 3/50 (6%)

Query: 104 ILLTGAGNGIGRELAKQFV---QHKVTLVCWDIDEKGNNETKQMLEEQGY 150
           IL+TG   G+G  L K  +   Q    L     + +   E + + +    
Sbjct: 5   ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSN 54

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 43.0 bits (100), Expect = 3e-06
 Identities = 6/66 (9%), Positives = 20/66 (30%)

Query: 91  LIPPSEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY 150
           ++  +  S++G+  ++      +G   A         +V               + ++  
Sbjct: 13  VVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK 72

Query: 151 KNIHTY 156
            N+   
Sbjct: 73  VNVTAA 78

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (99), Expect = 6e-06
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 6/53 (11%)

Query: 103 IILLTGAGNGIGRELAKQFVQH-----KVTLVCWDIDEKGN-NETKQMLEEQG 149
           ++L+TG  +GIG  LA +         KV     D+  +G   E  + L    
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPP 56

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 42.2 bits (98), Expect = 6e-06
 Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 103 IILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGY 150
            +++TGA  GIG  L +Q V+  +   ++    D +   E K + + + +
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVH 54

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 42.3 bits (98), Expect = 8e-06
 Identities = 10/56 (17%), Positives = 19/56 (33%), Gaps = 1/56 (1%)

Query: 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYK 157
           + L+TGA   +GR +A+        +           N     L  +   +  T +
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ 59

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 41.8 bits (97), Expect = 9e-06
 Identities = 10/54 (18%), Positives = 16/54 (29%), Gaps = 1/54 (1%)

Query: 105 LLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYK 157
           ++TG    IG  +A +  Q    +V      E         L      +    K
Sbjct: 5   VITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCK 58

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 38.0 bits (86), Expect = 3e-04
 Identities = 10/50 (20%), Positives = 19/50 (38%), Gaps = 2/50 (4%)

Query: 101 GEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ 148
            +I  + G G+  G G  +AK+  +  V ++        N   K     +
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGK 51

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.5 bits (85), Expect = 3e-04
 Identities = 8/45 (17%), Positives = 17/45 (37%), Gaps = 2/45 (4%)

Query: 104 ILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLE 146
           +L+TGA    G+ + K+  +   K          +G  +     +
Sbjct: 6   VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEAD 50

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.6 bits (83), Expect = 7e-04
 Identities = 12/55 (21%), Positives = 22/55 (40%)

Query: 103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYK 157
           I+L+TG    IG     + +++    V  D       ++   LE     +I  Y+
Sbjct: 3   IVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYE 57

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 36.3 bits (82), Expect = 9e-04
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 104 ILLTGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYK 157
           ILL GA   IGR +AK  +   H   L+  +     N+E  Q+LE       +   
Sbjct: 6   ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 61

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 35.7 bits (81), Expect = 0.001
 Identities = 11/54 (20%), Positives = 21/54 (38%)

Query: 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYK 157
           +L+TG    IG     Q +Q+   ++  D           ++E  G K+    +
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVE 56

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 35.2 bits (79), Expect = 0.002
 Identities = 9/57 (15%), Positives = 22/57 (38%)

Query: 100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTY 156
           EG ++L+TGA   +   + +Q ++H   +             ++  + +      T 
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETA 66

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (77), Expect = 0.003
 Identities = 8/53 (15%), Positives = 12/53 (22%)

Query: 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTY 156
           I + GA    G     Q VQ    +     D                 ++   
Sbjct: 6   IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQA 58

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 34.4 bits (77), Expect = 0.004
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE 135
           IL+TGA   +GRE+ KQ     V ++  D+ +
Sbjct: 4   ILITGANGQLGREIQKQLKGKNVEVIPTDVQD 35

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	159
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.46
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.43
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.41
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.41
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.41
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.4
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.39
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.39
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.37
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.35
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.34
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.33
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.32
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.31
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.31
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.31
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.3
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.3
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.29
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.27
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.27
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.27
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.27
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.27
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.26
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.26
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.25
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.25
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.23
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.22
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.22
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.22
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.22
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.21
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.2
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.2
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.17
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.17
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.16
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.14
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.14
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.13
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.12
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.11
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.09
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.07
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.05
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.04
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	98.99
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.99
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	98.98
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	98.96
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	98.94
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	98.93
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	98.91
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	98.9
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	98.86
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	98.86
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	98.86
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	98.8
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	98.7
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	98.63
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	98.59
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.59
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	98.51
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.49
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	98.37
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.28
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.92
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	97.86
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	97.83
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	97.71
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	97.7
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	97.67
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	97.63
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	97.62
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	97.53
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.52
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	97.47
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	97.42
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	97.41
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.4
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	97.39
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.38
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	97.34
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.34
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	97.17
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	97.06
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.98
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	96.93
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	96.92
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.87
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	96.73
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	96.71
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	96.68
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.59
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.56
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	96.51
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.5
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.42
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.37
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.36
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.36
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.35
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.3
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	96.28
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.24
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.15
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.13
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.1
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.02
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.01
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	95.91
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	95.89
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.78
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	95.77
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.75
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	95.74
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.7
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.65
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	95.57
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	95.54
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.39
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.35
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	95.23
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	95.22
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.2
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	95.13
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.11
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	95.09
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.07
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.06
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.02
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	94.98
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	94.92
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	94.91
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.81
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	94.75
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	94.71
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.69
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	94.54
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.46
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.41
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.33
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	93.99
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	93.98
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.93
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	93.92
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	93.9
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	93.88
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.84
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	93.83
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	93.73
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	93.69
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.68
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	93.63
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	93.51
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	93.5
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.48
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	93.33
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.27
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	93.22
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	93.16
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	93.14
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	92.99
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	92.98
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	92.91
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	92.9
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	92.86
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	92.78
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	92.71
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	92.57
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.48
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	92.34
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	92.25
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.13
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	92.1
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.06
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.04
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	92.0
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	91.97
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	91.93
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.91
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	91.9
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	91.89
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	91.81
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	91.79
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	91.75
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.57
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	91.34
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	91.3
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	91.28
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.26
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	91.25
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	91.13
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	90.93
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	90.9
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	90.83
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	90.82
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	90.79
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	90.58
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	90.57
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	90.49
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	90.43
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	90.41
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	90.34
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	90.29
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	90.03
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	89.81
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	89.79
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	89.22
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	89.21
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	89.19
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	89.11
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	88.82
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	88.33
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	88.22
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	88.22
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	87.71
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.51
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	87.21
d1ihua1	296	Arsenite-translocating ATPase ArsA {Escherichia co	87.0
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	86.98
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	86.89
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	86.6
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	86.13
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	86.04
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	85.92
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	85.79
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	85.67
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	85.49
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	85.45
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	85.23
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	85.16
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	84.82
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	84.72
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	84.71
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	84.62
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	83.4
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	83.18
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	83.17
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	82.53
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	82.24
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	82.21
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	81.08
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	80.38

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=5.5e-14  Score=109.96  Aligned_cols=63  Identities=46%  Similarity=0.738  Sum_probs=60.1

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++.||+++||||++|||+++|++|+++|++|++++|++++++++++++++.|.+ +..+.||
T Consensus         2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~-~~~~~~D   64 (244)
T d1yb1a_           2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK-VHTFVVD   64 (244)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEee
Confidence            46799999999999999999999999999999999999999999999999998988 9999998

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.43  E-value=1.1e-13  Score=108.82  Aligned_cols=63  Identities=21%  Similarity=0.338  Sum_probs=59.7

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +.++++|
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~-~~~~~~D   65 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK-VEASVCD   65 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-ceEEEee
Confidence            46799999999999999999999999999999999999999999999999999888 8899887

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.41  E-value=1.2e-13  Score=108.37  Aligned_cols=62  Identities=27%  Similarity=0.490  Sum_probs=59.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++||+++||||++|||+++|++|+++|++|++++|++++++++++++++.|++ +..+++|
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~-~~~~~~D   68 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ-AFACRCD   68 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEEcc
Confidence            3578999999999999999999999999999999999999999999999999988 9999998

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.41  E-value=1.9e-13  Score=107.52  Aligned_cols=64  Identities=20%  Similarity=0.344  Sum_probs=60.3

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.++++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +..+++|
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~-~~~~~~D   65 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ-VTGSVCD   65 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-eEEEecc
Confidence            356899999999999999999999999999999999999999999999999998888 9999987

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=1.6e-13  Score=107.76  Aligned_cols=64  Identities=23%  Similarity=0.374  Sum_probs=59.2

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC--CeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY--KNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~--~~v~~~~~D  159 (159)
                      .|.+++||+++||||++|||+++|++|+++|++|++++|++++++++++++++.+.  + +..++||
T Consensus         4 ~M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~-~~~~~~D   69 (257)
T d1xg5a_           4 GMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGT-LIPYRCD   69 (257)
T ss_dssp             TCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSE-EEEEECC
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCce-EEEEEcc
Confidence            46779999999999999999999999999999999999999999999999998863  5 7888988

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.40  E-value=2e-13  Score=107.28  Aligned_cols=61  Identities=21%  Similarity=0.445  Sum_probs=58.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++++.|.+ +..+++|
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~-~~~~~~D   62 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE-ARSYVCD   62 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSC-EEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence            578999999999999999999999999999999999999999999999998988 9999998

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.39  E-value=2.7e-13  Score=106.49  Aligned_cols=62  Identities=23%  Similarity=0.346  Sum_probs=59.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+ +.++++|
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~-~~~~~~D   63 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN-VEGSVCD   63 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-ceEEEee
Confidence            5789999999999999999999999999999999999999999999999999988 8898888

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.39  E-value=2.5e-13  Score=106.24  Aligned_cols=63  Identities=29%  Similarity=0.491  Sum_probs=59.6

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+.+++|+++||||++|||+++|++|+++|++|++++|++++++++++++++.|.+ +..+++|
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~-~~~~~~D   67 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE-SSGYAGD   67 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCC-EEEEECC
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence            46788999999999999999999999999999999999999999999999998888 9999988

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.37  E-value=4.5e-13  Score=104.82  Aligned_cols=59  Identities=27%  Similarity=0.406  Sum_probs=56.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.|.+ +..+++|
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~-~~~~~~D   59 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE-ADGRTCD   59 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEee
Confidence            4899999999999999999999999999999999999999999999998988 9999988

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.35  E-value=7.5e-13  Score=103.53  Aligned_cols=62  Identities=23%  Similarity=0.398  Sum_probs=56.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++++++.++++.+. |.+ +..+++|
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~-~~~~~~D   63 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE-TMAFRCD   63 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCC-EEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCc-EEEEEcc
Confidence            3688999999999999999999999999999999999999999998888655 677 8899988

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.34  E-value=9e-13  Score=104.29  Aligned_cols=62  Identities=21%  Similarity=0.384  Sum_probs=56.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.+++++.++++.++ +.+ +..+++|
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~-~~~~~~D   83 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNK-VHAIQCD   83 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSC-EEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCc-eEEEEec
Confidence            4789999999999999999999999999999999999999999999888765 556 8888887

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.33  E-value=7.5e-13  Score=103.67  Aligned_cols=62  Identities=18%  Similarity=0.304  Sum_probs=56.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+. |.+ +..+++|
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~-~~~~~~D   67 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK-TKAYQCD   67 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCC-EEEEECC
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCc-eEEEEcc
Confidence            4789999999999999999999999999999999999999999998888654 777 9999988

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.32  E-value=8.9e-13  Score=103.73  Aligned_cols=61  Identities=23%  Similarity=0.427  Sum_probs=56.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|+. +.++++.+++++.+.+ +..+++|
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~-~~~~~~D   65 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE-AIAVKGD   65 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCc-EEEEEcc
Confidence            68999999999999999999999999999999999975 4688899999999988 9999988

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.31  E-value=1.5e-12  Score=101.70  Aligned_cols=57  Identities=23%  Similarity=0.406  Sum_probs=54.9

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |+++||||++|||+++|++|+++|++|++++|++++++++++++++.|.+ +..+++|
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~-~~~~~~D   58 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH-AVAVKVD   58 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEee
Confidence            78999999999999999999999999999999999999999999999988 9999998

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.31  E-value=1.4e-12  Score=102.49  Aligned_cols=64  Identities=28%  Similarity=0.466  Sum_probs=57.6

Q ss_pred             CCCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC-CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          95 SEKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        95 ~~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~-~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ...+++||+++||||++|||+++|++|+++|++|++++++ ++.++++++++++.+.+ +..+++|
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~-~~~~~~D   76 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD-AACVKAN   76 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCc-eeeEeCC
Confidence            3457999999999999999999999999999999999886 45688899999999988 9999887

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.31  E-value=1.5e-12  Score=102.22  Aligned_cols=61  Identities=21%  Similarity=0.358  Sum_probs=56.1

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC---CeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY---KNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~---~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++++++++.+.   + +..+++|
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~-~~~~~~D   65 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQN-VNSVVAD   65 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGG-EEEEECC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCc-eEEEEcc
Confidence            47899999999999999999999999999999999999999999999988753   4 7888887

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.30  E-value=1.4e-12  Score=102.90  Aligned_cols=61  Identities=23%  Similarity=0.400  Sum_probs=56.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC---CCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG---YKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g---~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+   .+ +..+++|
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~-~~~~~~D   65 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQ-VNSVVAD   65 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGG-EEEEECC
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCc-eEEEEcc
Confidence            4789999999999999999999999999999999999999999999998875   35 7888887

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.30  E-value=1.9e-12  Score=101.13  Aligned_cols=62  Identities=29%  Similarity=0.395  Sum_probs=56.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEc-CCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWD-IDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~-r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++.||+++||||++|||+++|++|+++|++|++++ ++++.++++.+++++.|.+ +..+++|
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~-~~~~~~D   64 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ-GVAIQAD   64 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCC-ceEecCC
Confidence            468999999999999999999999999999999865 5666689999999999998 9999988

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.29  E-value=2.2e-12  Score=101.87  Aligned_cols=61  Identities=30%  Similarity=0.441  Sum_probs=56.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC---CeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY---KNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~---~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++++++++.+.   + +..+++|
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~-~~~~~~D   64 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEK-INAVVAD   64 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGG-EEEEECC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcc-eEEEEee
Confidence            36899999999999999999999999999999999999999999999988763   4 7888887

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.27  E-value=3.2e-12  Score=100.23  Aligned_cols=61  Identities=23%  Similarity=0.405  Sum_probs=55.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.+ +..+++|
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~-~~~~~~D   63 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAE-VLTTVAD   63 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCC-EEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCe-EEEEecc
Confidence            368999999999999999999999999999999999999999999988766  346 8888887

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=3.3e-12  Score=100.29  Aligned_cols=61  Identities=25%  Similarity=0.355  Sum_probs=53.6

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++||+++||||++|||+++|++|+++|++|++++|++++++++.+++...++..+..+.+|
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d   72 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGT   72 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhh
Confidence            8999999999999999999999999999999999999999999988876643326666665

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.27  E-value=2.5e-12  Score=100.57  Aligned_cols=58  Identities=26%  Similarity=0.436  Sum_probs=52.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++   +.+ +..+++|
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~-~~~~~~D   59 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPA-ACAIALD   59 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTT-EEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCc-eEEEEee
Confidence            478999999999999999999999999999999999998888887766   667 8888887

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.27  E-value=2.5e-12  Score=100.45  Aligned_cols=60  Identities=18%  Similarity=0.373  Sum_probs=54.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|+++.++++.++++. +.+ +.++++|
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~-~~~~~~D   62 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQ-IQFFQHD   62 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTT-EEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCc-EEEEEcc
Confidence            48899999999999999999999999999999999999999999888854 456 8888887

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=4.4e-12  Score=101.43  Aligned_cols=62  Identities=16%  Similarity=0.313  Sum_probs=56.8

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc-----CCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ-----GYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~-----g~~~v~~~~~D  159 (159)
                      ..++||+++||||++|||+++|++|+++|++|++++|++++++++++++++.     +.+ +..+++|
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~-~~~~~~D   74 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQAR-VIPIQCN   74 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCC-EEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCce-EEEEecc
Confidence            5689999999999999999999999999999999999999999999999753     456 8889887

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.26  E-value=2.6e-12  Score=100.97  Aligned_cols=60  Identities=23%  Similarity=0.350  Sum_probs=54.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+ . +.++++|
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~-~~~~~~D   62 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-V-ISFVHCD   62 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT-T-EEEEECC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC-c-eEEEEcc
Confidence            5889999999999999999999999999999999999999999999986544 4 6778887

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=2.3e-12  Score=100.63  Aligned_cols=60  Identities=27%  Similarity=0.385  Sum_probs=54.6

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc--CCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ--GYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~--g~~~v~~~~~D  159 (159)
                      .+||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.+ +.++++|
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~D   62 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQK-TLFIQCD   62 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGG-EEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCc-EEEEEee
Confidence            36999999999999999999999999999999999999999999998765  346 8888888

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=3.3e-12  Score=99.56  Aligned_cols=62  Identities=26%  Similarity=0.297  Sum_probs=55.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHH---CCCEEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQ---HKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~---~Ga~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D  159 (159)
                      ..++||+++||||++|||+++|++|++   +|++|++++|++++++++.+++++.+  .+ +..++||
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~-~~~~~~D   68 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK-VVLAAAD   68 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSE-EEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCce-EEEEEcc
Confidence            357899999999999999999999996   79999999999999999999998764  45 8888887

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.25  E-value=3.6e-12  Score=99.16  Aligned_cols=58  Identities=26%  Similarity=0.404  Sum_probs=51.9

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++++++.   .+ +..+++|
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~---~~-~~~~~~D   58 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG---AN-GKGLMLN   58 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GG-EEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CC-CcEEEEE
Confidence            5789999999999999999999999999999999999999998888773   34 6677776

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.23  E-value=3.9e-12  Score=99.72  Aligned_cols=58  Identities=26%  Similarity=0.385  Sum_probs=51.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++   +.+ +.++++|
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~D   59 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDA-ARYQHLD   59 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGG-EEEEECC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCc-eEEEEcc
Confidence            689999999999999999999999999999999999998777776654   556 8888887

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.22  E-value=6.4e-12  Score=98.26  Aligned_cols=60  Identities=22%  Similarity=0.352  Sum_probs=53.2

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-ccHHHHHHHHHHc-CCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-KGNNETKQMLEEQ-GYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-~~~~~~~~ei~~~-g~~~v~~~~~D  159 (159)
                      ++||+++||||++|||+++|++|+++|++|++++|++ +.++++.+++.+. |.+ +.++++|
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~-~~~~~~D   63 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK-VLYDGAD   63 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSC-EEEECCC
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCc-EEEEECC
Confidence            6799999999999999999999999999999999975 5678888888665 667 8889887

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.22  E-value=1.3e-11  Score=96.07  Aligned_cols=59  Identities=25%  Similarity=0.460  Sum_probs=52.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|+++  ++..+++++.|.+ +..+++|
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~--~~~~~~~~~~g~~-~~~~~~D   60 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRR-VLTVKCD   60 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCC-EEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCch--HHHHHHHHHcCCc-EEEEEee
Confidence            478999999999999999999999999999999999875  4455667777888 9999988

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=1.4e-11  Score=95.13  Aligned_cols=49  Identities=24%  Similarity=0.472  Sum_probs=46.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLE  146 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~  146 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~   50 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG   50 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC
Confidence            6899999999999999999999999999999999999999998888773

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=5.5e-12  Score=99.09  Aligned_cols=57  Identities=19%  Similarity=0.281  Sum_probs=53.5

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHC-CCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQH-KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~-Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++||||++|||+++|++|+++ |++|++++|++++++++++++++.+.+ +.+++||
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D   61 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLS-PRFHQLD   61 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCC-CEEEECC
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEEe
Confidence            56799999999999999999986 899999999999999999999999988 9999998

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.21  E-value=8.2e-12  Score=98.61  Aligned_cols=58  Identities=26%  Similarity=0.425  Sum_probs=50.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++   +.+ +..+++|
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~-~~~~~~D   59 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDN-VLGIVGD   59 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGG-EEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCC-eeEEecc
Confidence            478999999999999999999999999999999999988777766654   556 7888877

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.20  E-value=1e-11  Score=97.07  Aligned_cols=58  Identities=24%  Similarity=0.433  Sum_probs=52.1

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++   +.+ +..+++|
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~-~~~~~~D   60 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GER-SMFVRHD   60 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTT-EEEECCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCC-eEEEEee
Confidence            478999999999999999999999999999999999998888888776   556 7777776

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.20  E-value=8.6e-12  Score=97.21  Aligned_cols=59  Identities=19%  Similarity=0.289  Sum_probs=52.2

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.   .+ +..+++|
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~-~~~~~~D   60 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DA-ARYVHLD   60 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GG-EEEEECC
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---Cc-ceEEEee
Confidence            46889999999999999999999999999999999999988888877763   45 7778887

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.17  E-value=1.3e-11  Score=95.77  Aligned_cols=58  Identities=29%  Similarity=0.371  Sum_probs=50.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++||+++||||++|||+++|++|+++|++|++++|+++++++..+   +.+.+ +.++++|
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~-~~~~~~D   59 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA---ALEAE-AIAVVAD   59 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---TCCSS-EEEEECC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HcCCc-eEEEEec
Confidence            4789999999999999999999999999999999999876665544   44677 8889988

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.17  E-value=1.2e-11  Score=96.05  Aligned_cols=56  Identities=30%  Similarity=0.469  Sum_probs=48.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     + +..++||
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~-~~~~~~D   57 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----G-AHPVVMD   57 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----T-CEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----C-CeEEEEe
Confidence            478999999999999999999999999999999999988887776644     3 4566776

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.16  E-value=1.4e-11  Score=95.67  Aligned_cols=57  Identities=23%  Similarity=0.244  Sum_probs=49.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++    .. +..+++|
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~-~~~~~~D   58 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PG-IEPVCVD   58 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TT-CEEEECC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CC-CeEEEEe
Confidence            588999999999999999999999999999999999988777776654    23 5566776

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.14  E-value=4.5e-11  Score=93.35  Aligned_cols=61  Identities=11%  Similarity=0.131  Sum_probs=49.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC-CCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG-YKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g-~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++.++..+.....+ .+ +.++.+|
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~-~~~~~~d   63 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVN-ITFHTYD   63 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSE-EEEEECC
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCC-EEEEEee
Confidence            6889999999999999999999999999999999888777665544333333 34 7777776

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=2.5e-11  Score=94.79  Aligned_cols=57  Identities=28%  Similarity=0.452  Sum_probs=49.7

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++    .+ +.++++|
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~-~~~~~~D   59 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PG-AVFILCD   59 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TT-EEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CC-CeEEEcc
Confidence            578999999999999999999999999999999999987777665543    45 7788887

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=2.1e-11  Score=94.65  Aligned_cols=57  Identities=23%  Similarity=0.280  Sum_probs=49.3

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.    . +..+++|
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~-~~~~~~D   60 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----G-IEPVCVD   60 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----T-CEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----C-CeEEEEe
Confidence            5799999999999999999999999999999999999988887776552    3 5566666

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.12  E-value=2.2e-11  Score=94.40  Aligned_cols=57  Identities=28%  Similarity=0.379  Sum_probs=53.4

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCE-------EEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVT-------LVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~-------Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++||||++|||+++|++|+++|++       |++++|++++++++.+++++.|.+ +..+++|
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~-~~~~~~D   65 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL-TDTITAD   65 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCE-EEEEECC
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEec
Confidence            46899999999999999999999997       889999999999999999999988 9999988

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.11  E-value=8.9e-11  Score=91.04  Aligned_cols=61  Identities=18%  Similarity=0.188  Sum_probs=49.8

Q ss_pred             CCCCCCeEEEeCCCC--CchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~--GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++||+++|||+++  |||+++|++|+++|++|++++|+++..++ .++..+.+++ ...+++|
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~-~~~~~~~~~~-~~~~~~D   66 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE-AEKLAEALGG-ALLFRAD   66 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTTC-CEEEECC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHhhhccCc-ccccccc
Confidence            368999999999876  99999999999999999999998765554 4455555556 6778887

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.09  E-value=9.2e-11  Score=91.24  Aligned_cols=60  Identities=18%  Similarity=0.215  Sum_probs=49.6

Q ss_pred             CCCCCeEEEeCCCC--CchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~--GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++||+++|||+++  |||+++|++|+++|++|++++|+++ +++.++++.+.+.+ +..+++|
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~-~~~~~~d   63 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNS-PYVYELD   63 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTC-CCEEECC
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCc-eeEeeec
Confidence            47899999999764  9999999999999999999999954 55566777777766 6666665

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.07  E-value=7.9e-11  Score=91.40  Aligned_cols=57  Identities=21%  Similarity=0.345  Sum_probs=52.0

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEc-CCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWD-IDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~-r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++++||||++|||+++|++|+++|++|++.+ |+++.++++.+++++.|.+ +..+++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~-~~~~~~D   59 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQ-AITFGGD   59 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCE-EEEEECC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCc-EEEEeCC
Confidence            5899999999999999999999999999875 5677789999999988888 9999988

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.05  E-value=5.5e-11  Score=88.91  Aligned_cols=53  Identities=9%  Similarity=0.124  Sum_probs=49.5

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ  148 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~  148 (159)
                      ..+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~   70 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR   70 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc
Confidence            35899999999999999999999999999999999999999999999988765

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=4.7e-11  Score=92.73  Aligned_cols=47  Identities=32%  Similarity=0.526  Sum_probs=41.9

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      |.+++||+++||||++|||+++|++|+++|++|++++|++++++++.
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~   47 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE   47 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            45689999999999999999999999999999999999987665543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.99  E-value=4.3e-10  Score=89.90  Aligned_cols=55  Identities=27%  Similarity=0.539  Sum_probs=46.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC---------ccHHHHHHHHHHcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE---------KGNNETKQMLEEQGYK  151 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~---------~~~~~~~~ei~~~g~~  151 (159)
                      ++++||+++||||++|||+++|++|+++|++|++.|++.         +.++++.++++..+..
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK   66 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccc
Confidence            468899999999999999999999999999999997653         3467777788777654

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.99  E-value=4e-10  Score=87.59  Aligned_cols=55  Identities=25%  Similarity=0.507  Sum_probs=44.5

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++||+++||||++|||+++|++|+++|++|++++|+++. ++..+++   +   ..++++|
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~-~~~~~~~---~---~~~~~~D   56 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI---G---GAFFQVD   56 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH---T---CEEEECC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHc---C---CeEEEEe
Confidence            4789999999999999999999999999999999999765 3344433   3   3456666

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.98  E-value=2.8e-10  Score=87.87  Aligned_cols=57  Identities=25%  Similarity=0.318  Sum_probs=49.1

Q ss_pred             CCeEEEeCCCCCchHHHHHHHH---HCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFV---QHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la---~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      -|+++||||++|||+++|++|+   ++|++|++++|++++++++.+ +.+.+.+ +.++++|
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~~~~-~~~~~~D   61 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSN-IHILEID   61 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHHCTT-EEEEECC
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhcCCc-EEEEEEE
Confidence            3789999999999999999996   589999999999999888754 4455667 8999988

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=98.96  E-value=6.3e-10  Score=85.66  Aligned_cols=59  Identities=19%  Similarity=0.150  Sum_probs=45.8

Q ss_pred             CCCCCeEEEeCCCC--CchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEec
Q psy2040          98 SLEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKR  158 (159)
Q Consensus        98 ~l~gk~~lITG~s~--GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~  158 (159)
                      .++||+++||||++  |||+++|+.|+++|++|++++|+++..+++ +++.+...+ ....+.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~-~~~~~~   62 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGS-DIVLQC   62 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTC-CCEEEC
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCC-cceeec
Confidence            47899999999998  899999999999999999999997655555 444444433 444444

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.94  E-value=8.1e-10  Score=85.31  Aligned_cols=59  Identities=20%  Similarity=0.305  Sum_probs=51.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCC---CccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDID---EKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~---~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++++||||++|||+++|++|+++|+ +|++++|+   .+..++..+++++.|.+ +.+++||
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~-v~~~~~D   70 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGAR-TTVAACD   70 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCE-EEEEECC
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhcccc-ccccccc
Confidence            357999999999999999999999998 58888886   35577888888888888 9999988

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.93  E-value=4.7e-10  Score=86.66  Aligned_cols=57  Identities=25%  Similarity=0.380  Sum_probs=46.9

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |+.|+++||||++|||+++|++|+++|+  +|++.+|++++++++.+   ..+.+ +.++++|
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~---~~~~~-~~~~~~D   59 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSR-VHVLPLT   59 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---CCCTT-EEEEECC
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH---hhCCc-eEEEEEe
Confidence            3569999999999999999999999996  68888999988776543   23456 8888887

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=98.91  E-value=9.8e-10  Score=84.45  Aligned_cols=57  Identities=18%  Similarity=0.196  Sum_probs=46.6

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc-HHHHHHHHHHcCCCeEEEEec
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG-NNETKQMLEEQGYKNIHTYKR  158 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~-~~~~~~ei~~~g~~~v~~~~~  158 (159)
                      .+++||||++|||+++|++|+++|++|++++|+.++ .+++.+++.+.+..++...+.
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   59 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKG   59 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEec
Confidence            489999999999999999999999999999998654 677888887774322555543

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.90  E-value=6.8e-10  Score=85.72  Aligned_cols=40  Identities=18%  Similarity=0.303  Sum_probs=37.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~   42 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG   42 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence            4689999999999999999999999999999999999765

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=98.86  E-value=1.9e-09  Score=83.73  Aligned_cols=58  Identities=17%  Similarity=0.213  Sum_probs=48.0

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC-CCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r-~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++||||++|||+++|++|+++|++|+++++ +++..+++.+++++.+...+..+++|
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d   61 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQAD   61 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEee
Confidence            48999999999999999999999999999876 45668888889987754326666655

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.86  E-value=7.1e-10  Score=85.18  Aligned_cols=41  Identities=22%  Similarity=0.300  Sum_probs=37.7

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      ++||+++|||+++|||+++|++|+++|++|++++|+++.++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~   42 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK   42 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            67999999999999999999999999999999999876544

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=98.86  E-value=1.4e-09  Score=83.85  Aligned_cols=59  Identities=19%  Similarity=0.185  Sum_probs=45.4

Q ss_pred             CCCCCeEEEeC--CCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          98 SLEGEIILLTG--AGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG--~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++||+++|||  +++|||+++|++|+++|++|++++|+.++..+...  ++.+.+ +..+++|
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~--~~~~~~-~~~~~~d   63 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT--DRLPAK-APLLELD   63 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH--TTSSSC-CCEEECC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH--HHcCCc-eeeEeee
Confidence            57899999999  46799999999999999999999998765432221  223555 6667776

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.3e-09  Score=86.10  Aligned_cols=58  Identities=22%  Similarity=0.239  Sum_probs=44.4

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEE---EcCCCccHH---HHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVC---WDIDEKGNN---ETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi---~~r~~~~~~---~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .|+++||||++|||+++|++|+++|++|+.   .+++.+..+   +..+++...+.+ +..+++|
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~D   65 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGS-LETLQLD   65 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTS-EEEEECC
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCc-eEEEecc
Confidence            478999999999999999999999998554   455554444   444444455777 8999988

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.70  E-value=3.1e-09  Score=80.46  Aligned_cols=37  Identities=27%  Similarity=0.466  Sum_probs=34.3

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      .|+++||||++|||+++|++|+++|++|++++|+++.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence            4899999999999999999999999999999997653

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.63  E-value=1.1e-08  Score=79.78  Aligned_cols=41  Identities=17%  Similarity=0.249  Sum_probs=37.0

Q ss_pred             CCCCCCeEEEeCCCC--CchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          97 KSLEGEIILLTGAGN--GIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        97 ~~l~gk~~lITG~s~--GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      .+++||+++|||+++  |||+++|++|+++|++|++++|+++.
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~   46 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL   46 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence            478999999999875  99999999999999999999997643

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.59  E-value=2.6e-08  Score=76.94  Aligned_cols=43  Identities=19%  Similarity=0.171  Sum_probs=38.7

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      +++|||+++|||+++|++|+++|++|++++|+.++.+++.+..
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~   44 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA   44 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh
Confidence            6899999999999999999999999999999988877765543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.59  E-value=1.7e-08  Score=77.03  Aligned_cols=35  Identities=29%  Similarity=0.457  Sum_probs=32.9

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      |+++||||++|||+++|++|+++|++|++++|+++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            79999999999999999999999999999998753

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.51  E-value=3.7e-08  Score=75.25  Aligned_cols=36  Identities=19%  Similarity=0.320  Sum_probs=33.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      +||+++||||++|||+++|++|+++|++|+++++++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~   36 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVE   36 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            589999999999999999999999999999988753

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.49  E-value=4e-08  Score=70.24  Aligned_cols=47  Identities=15%  Similarity=0.163  Sum_probs=42.2

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY  150 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~  150 (159)
                      +.|+||++++|+++|+.|++.|++|++.+|++++++++.++++..+.
T Consensus         3 i~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~   49 (212)
T d1jaya_           3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAG   49 (212)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred             EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC
Confidence            55668889999999999999999999999999999999999987643

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.37  E-value=1.1e-07  Score=72.40  Aligned_cols=35  Identities=14%  Similarity=0.347  Sum_probs=31.9

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      +.++||||++|||+++|++|+++|++|+++||+++
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~   37 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN   37 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCch
Confidence            45699999999999999999999999999999753

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.28  E-value=4e-07  Score=72.55  Aligned_cols=44  Identities=23%  Similarity=0.280  Sum_probs=37.1

Q ss_pred             CCCeEEEeC--CCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         100 EGEIILLTG--AGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       100 ~gk~~lITG--~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      ++|+++|||  +++|||+++|++|+++|++|++.+++.........
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~   46 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKN   46 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHH
Confidence            479999999  66899999999999999999999988765444433

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=4e-06  Score=61.77  Aligned_cols=39  Identities=21%  Similarity=0.066  Sum_probs=35.3

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      ..|.++||||+|+||.+++++|.++|++|.+..|+++++
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~   40 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL   40 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhc
Confidence            457899999999999999999999999999999987653

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=97.86  E-value=5.3e-06  Score=64.95  Aligned_cols=40  Identities=15%  Similarity=0.148  Sum_probs=36.2

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      ++||.++||||+|-||..+++.|.++|++|..++|+....
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~   45 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV   45 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcc
Confidence            4689999999999999999999999999999999976543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=97.83  E-value=8.3e-06  Score=64.78  Aligned_cols=35  Identities=17%  Similarity=0.199  Sum_probs=31.4

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      .|+++||||+|=||..++++|.++|++|+.++|..
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~   35 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA   35 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            37899999999999999999999999999999843

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=97.71  E-value=3.7e-05  Score=60.31  Aligned_cols=56  Identities=14%  Similarity=0.103  Sum_probs=42.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      +.|+++||||+|.||..++++|.++|++|.+..|+.+....  +++... .. +..+++|
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~~-~~-v~~~~gD   57 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAI-PN-VTLFQGP   57 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHTS-TT-EEEEESC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhccc-CC-CEEEEee
Confidence            35899999999999999999999999999999998766432  233222 23 5566655

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.70  E-value=1.5e-05  Score=61.58  Aligned_cols=34  Identities=21%  Similarity=0.148  Sum_probs=31.8

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      |.|+||||+|-||..++++|.++|++|+.++|..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~   34 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARR   34 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCC
Confidence            6899999999999999999999999999998864

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=97.67  E-value=3.6e-05  Score=60.41  Aligned_cols=45  Identities=18%  Similarity=0.275  Sum_probs=39.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM  144 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~e  144 (159)
                      +||.++||||+|-||..++++|.++|++|+.+.|+.++.+.+.+.
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~   54 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKR   54 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHh
Confidence            489999999999999999999999999999999987665555443

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=97.63  E-value=7.7e-05  Score=55.78  Aligned_cols=37  Identities=27%  Similarity=0.229  Sum_probs=33.6

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      .|.++||||+|-||+.++++|.++|++|++.+|+...
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~   39 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTA   39 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCcc
Confidence            4679999999999999999999999999999997544

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=97.62  E-value=8e-05  Score=56.26  Aligned_cols=35  Identities=14%  Similarity=0.136  Sum_probs=31.9

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      +.++||||+|-||+.++++|.++|++|++..|+..
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~   38 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEV   38 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCc
Confidence            35999999999999999999999999999998754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.53  E-value=3.2e-05  Score=59.88  Aligned_cols=33  Identities=18%  Similarity=0.129  Sum_probs=31.5

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      |.++||||+|=||..++++|.++|++|+.++|.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            789999999999999999999999999999884

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.52  E-value=4.1e-05  Score=53.95  Aligned_cols=44  Identities=7%  Similarity=0.058  Sum_probs=38.8

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      +|.++|-|+ |.+|+.+|+.|+++|++|++++|+.++++++.++.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~   45 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV   45 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc
Confidence            688888776 99999999999999999999999999888776543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.47  E-value=0.00011  Score=58.33  Aligned_cols=32  Identities=16%  Similarity=0.259  Sum_probs=29.8

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWD  132 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~  132 (159)
                      |+.++||||+|=||..++++|.++|++|+++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            68899999999999999999999999999886

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=97.42  E-value=0.00018  Score=55.08  Aligned_cols=31  Identities=26%  Similarity=0.429  Sum_probs=28.9

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDI  133 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r  133 (159)
                      .++||||+|=||..++++|.++|++|+++|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~   32 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDN   32 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence            4899999999999999999999999999875

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.41  E-value=7.8e-05  Score=53.78  Aligned_cols=37  Identities=19%  Similarity=0.177  Sum_probs=30.5

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCE--EEEEcCCCcc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVT--LVCWDIDEKG  137 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~--Vvi~~r~~~~  137 (159)
                      -++++||||+|.||++++++|+++|++  |+...|++++
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~   41 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG   41 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHH
Confidence            368999999999999999999999975  4455676543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=9.5e-05  Score=57.66  Aligned_cols=32  Identities=25%  Similarity=0.298  Sum_probs=29.9

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDI  133 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r  133 (159)
                      |.++||||+|=||.+++++|.++|.+|+++|+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~   34 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN   34 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence            67899999999999999999999999999864

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.39  E-value=0.00022  Score=55.45  Aligned_cols=36  Identities=22%  Similarity=0.287  Sum_probs=32.8

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      .+.|+++||||+|-||..++++|.++|++|+.+|+.
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~   49 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNF   49 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECC
Confidence            345899999999999999999999999999999873

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.38  E-value=9.4e-05  Score=57.88  Aligned_cols=32  Identities=25%  Similarity=0.378  Sum_probs=30.4

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDI  133 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r  133 (159)
                      |.++||||+|=||..++++|.++|++|+++|+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEEC
Confidence            78999999999999999999999999999875

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=7.2e-05  Score=58.12  Aligned_cols=34  Identities=18%  Similarity=0.158  Sum_probs=30.7

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      |+|+||||+|=||..++++|.++|++|+.++|..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            4559999999999999999999999999998853

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=97.34  E-value=0.00011  Score=57.38  Aligned_cols=32  Identities=25%  Similarity=0.309  Sum_probs=29.8

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      .++||||+|=||..++++|.++|++|+++||.
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~   33 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNL   33 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECC
Confidence            38999999999999999999999999998873

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.17  E-value=0.00037  Score=52.04  Aligned_cols=49  Identities=27%  Similarity=0.434  Sum_probs=39.0

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC---ccHHHHHHHHHHcCCC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE---KGNNETKQMLEEQGYK  151 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~---~~~~~~~~ei~~~g~~  151 (159)
                      .++||||+|-||..++++|.++|++|+..+|++   ...+++.+.++....+
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~~D~~d~~~~~~~l~~~~~d   54 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPN   54 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechhccCCCHHHHHHHHHHcCCC
Confidence            389999999999999999999999999999865   2344555555555555

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00019  Score=53.33  Aligned_cols=38  Identities=16%  Similarity=0.334  Sum_probs=33.8

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCc
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEK  136 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~  136 (159)
                      +++|.++||||+|-+|..++++|.++|.  +|.+.+|++.
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~   51 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL   51 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChh
Confidence            5678999999999999999999999995  7999888654

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.98  E-value=0.0004  Score=49.69  Aligned_cols=52  Identities=19%  Similarity=0.233  Sum_probs=45.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG  149 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g  149 (159)
                      .+.+||.++|-|+ ||-+++++..|.+.|+++.++.|+.++.+++++.+.+.+
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~   65 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG   65 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc
Confidence            3567899999987 899999999999999999999999999998888776543

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.93  E-value=0.00058  Score=43.28  Aligned_cols=42  Identities=19%  Similarity=0.224  Sum_probs=35.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      +++.++|+|+++|.|.....-....|++|+.+.+++++.+-+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            577899999999999988887778899999998888775544

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=96.92  E-value=0.00086  Score=51.13  Aligned_cols=54  Identities=7%  Similarity=0.170  Sum_probs=39.3

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc----cHHHHHHHHHHcCCCeEEE
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK----GNNETKQMLEEQGYKNIHT  155 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~----~~~~~~~ei~~~g~~~v~~  155 (159)
                      .|.++||||+|-||..++++|.++|..+++.+...+    ..+++.+-++....+ ..+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d-~v~   59 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERID-QVY   59 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCS-EEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchhccccCHHHHHHHHhhcCCC-EEE
Confidence            467999999999999999999999999888765432    234444444555555 443

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.87  E-value=0.00067  Score=46.28  Aligned_cols=40  Identities=25%  Similarity=0.390  Sum_probs=35.3

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .++|.|+ |.+|+.+++.|.++|.+|+++|.+++..++..+
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~   41 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA   41 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhh
Confidence            5788887 999999999999999999999999887776544

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=96.73  E-value=0.0008  Score=48.26  Aligned_cols=39  Identities=15%  Similarity=0.193  Sum_probs=34.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      +|++++|+|+++|+|...+.-....|++|+.+++++++.
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~   67 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI   67 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHH
Confidence            589999999999999999888888999999998876653

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=96.71  E-value=0.00079  Score=52.01  Aligned_cols=34  Identities=21%  Similarity=0.390  Sum_probs=29.4

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCc
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEK  136 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~  136 (159)
                      .++||||+|-||..++++|.++| ++|+..|+..+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~   36 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSD   36 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCG
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCc
Confidence            48999999999999999999999 58888877543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.00078  Score=51.95  Aligned_cols=32  Identities=22%  Similarity=0.338  Sum_probs=30.4

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDI  133 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r  133 (159)
                      |.++||||+|=||+.++++|.++|++|+.+|+
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            78999999999999999999999999999886

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.0012  Score=46.83  Aligned_cols=40  Identities=23%  Similarity=0.344  Sum_probs=34.3

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .|++++|+|+++++|...++-....|++|+.+++++++.+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~   67 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK   67 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccc
Confidence            5889999999999999988888889999999888765443

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.56  E-value=0.0014  Score=46.73  Aligned_cols=41  Identities=12%  Similarity=0.126  Sum_probs=35.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      .|++++|+|+++++|...++-....|++|+.+++++++.+.
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~   67 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL   67 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccc
Confidence            57899999999999999888777889999999888766543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.51  E-value=0.0017  Score=50.59  Aligned_cols=35  Identities=26%  Similarity=0.321  Sum_probs=31.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      ++..++||||+|=||..++++|.++|.+|++.|+.
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~   48 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWK   48 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCC
Confidence            45679999999999999999999999999998764

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.50  E-value=0.001  Score=47.16  Aligned_cols=41  Identities=15%  Similarity=0.080  Sum_probs=35.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      .|++++|+||++|+|...++-....|++|+.+++++++.+.
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~   68 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS   68 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHH
Confidence            47899999999999999888878889999999998876543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.42  E-value=0.0018  Score=45.98  Aligned_cols=47  Identities=26%  Similarity=0.378  Sum_probs=41.9

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQML  145 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei  145 (159)
                      +++++.++|.|+ |++|..+++.|...|+ ++.++.|+.++.+++.+++
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~   68 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL   68 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh
Confidence            578899999998 9999999999999998 6889999988888887765

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.37  E-value=0.0039  Score=44.82  Aligned_cols=51  Identities=16%  Similarity=0.164  Sum_probs=40.5

Q ss_pred             CC-eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040         101 GE-IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK  151 (159)
Q Consensus       101 gk-~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~  151 (159)
                      |+ +++++||++|+|....+-....|++|+.+.++.+..++..+.+++.|..
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad   80 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT   80 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc
Confidence            54 5555899999999887766678999999888887777777777777765

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.36  E-value=0.0018  Score=46.83  Aligned_cols=42  Identities=19%  Similarity=0.208  Sum_probs=35.9

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|+|+++|.|....+-....|++|+.+++++++.+.+
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~   72 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL   72 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH
Confidence            488999999999999988777778999999999988775544

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.36  E-value=0.0042  Score=44.52  Aligned_cols=46  Identities=13%  Similarity=0.222  Sum_probs=39.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~  143 (159)
                      .++++|.++|-|+ ||.|++++..+.+.|+ +++++.|+.++.+++.+
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~   60 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALA   60 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHH
Confidence            4678999999998 7999999999999997 68899999887766544

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.35  E-value=0.0015  Score=46.75  Aligned_cols=42  Identities=19%  Similarity=0.240  Sum_probs=35.1

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .+++++|+|+++|+|...++-....|++|+.+.+++++.+.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            356799999999999988766667899999999988876554

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.30  E-value=0.0022  Score=46.32  Aligned_cols=42  Identities=19%  Similarity=0.224  Sum_probs=34.9

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .+++++|+||++|+|....+-....|++|+.+++++++.+.+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            346899999999999987777777899999999988875443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.28  E-value=0.0016  Score=47.10  Aligned_cols=35  Identities=17%  Similarity=0.245  Sum_probs=29.9

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDE  135 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~  135 (159)
                      .|.++||||+|-||+.++++|.++|.  +|....|++
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~   38 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA   38 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCc
Confidence            47899999999999999999999997  566666653

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.24  E-value=0.0015  Score=46.39  Aligned_cols=39  Identities=15%  Similarity=0.149  Sum_probs=33.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      +|++++|+||++|+|...+.-....|++|+++++++++.
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~   63 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR   63 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccc
Confidence            478999999999999998887778899999988776543

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.15  E-value=0.0024  Score=45.65  Aligned_cols=52  Identities=15%  Similarity=0.181  Sum_probs=44.7

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG  149 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g  149 (159)
                      .+.++|.++|-|+ ||-+++++..|.+.+.++.++.|+.+++++.++.++..+
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~   65 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG   65 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc
Confidence            3567899998876 888999999999988999999999999999988886543

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.0036  Score=45.58  Aligned_cols=43  Identities=19%  Similarity=0.169  Sum_probs=36.1

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      |.+-|-|+ |-+|.++|..++..|++|++.|++++.+++..+.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i   47 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGI   47 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhH
Confidence            57777877 67999999999999999999999988766655544

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.10  E-value=0.0031  Score=45.01  Aligned_cols=50  Identities=14%  Similarity=0.273  Sum_probs=42.6

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQ  148 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~  148 (159)
                      .+++||.++|-|+ ||-+++++..|.+.| +|.+..|+.++.+++++++...
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~   63 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK   63 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHh
Confidence            3578999999977 789999999998777 9999999999999988877543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.02  E-value=0.0045  Score=43.59  Aligned_cols=41  Identities=12%  Similarity=0.110  Sum_probs=34.3

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|.|+ +++|...+......|++|+++++++++.+.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a   67 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA   67 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh
Confidence            4789999986 8999988877667899999999998877644

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.01  E-value=0.0048  Score=43.77  Aligned_cols=45  Identities=11%  Similarity=0.282  Sum_probs=38.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei  145 (159)
                      ++|.++|-|+ ||-+++++..|.+.|+ ++.++.|+.++.+++++.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            4677888877 9999999999999997 7999999999888887765

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=95.91  E-value=0.0047  Score=43.27  Aligned_cols=40  Identities=18%  Similarity=0.153  Sum_probs=33.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      .|.+++|+| ++++|...+.-+...|++|+++++++++.+.
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~   65 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEV   65 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHH
Confidence            467899997 6899999998888899999999998876543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=95.89  E-value=0.00088  Score=52.07  Aligned_cols=29  Identities=17%  Similarity=0.279  Sum_probs=25.7

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEE
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVC  130 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi  130 (159)
                      |.++||||+|=||..++++|.++|++|.+
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v   31 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHV   31 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEE
Confidence            67999999999999999999999976433

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.78  E-value=0.0043  Score=39.76  Aligned_cols=38  Identities=18%  Similarity=0.237  Sum_probs=33.0

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      +++||.++|-|. +..|.++|+.|+++|++|.+.|.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            578999999988 66799999999999999999997543

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=95.77  E-value=0.0045  Score=44.03  Aligned_cols=39  Identities=10%  Similarity=0.066  Sum_probs=33.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~  139 (159)
                      .|.+++|.|+ +++|...+.-....|+ +|+++++++++.+
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~   67 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLK   67 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHH
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccc
Confidence            5889999986 8999998888888998 7999999887654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.75  E-value=0.0093  Score=43.90  Aligned_cols=45  Identities=24%  Similarity=0.308  Sum_probs=38.0

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      ..+++||++.|-| .|.+|..+|+.|.+.|++|+++|.+.+..+..
T Consensus        22 ~~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          22 LGSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            3478999999987 57799999999999999999999887655443

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=95.74  E-value=0.0015  Score=44.26  Aligned_cols=39  Identities=18%  Similarity=0.279  Sum_probs=32.5

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      |..+|.|+ |.+|+.+|+.|.++|.+|+++|.++++.++.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~   39 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY   39 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHH
Confidence            44566666 8999999999999999999999998776654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.70  E-value=0.011  Score=40.81  Aligned_cols=48  Identities=6%  Similarity=-0.040  Sum_probs=39.1

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK  151 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~  151 (159)
                      +++|.|. +.+|+.++++|.++|.++++++.+++...+..++....|..
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~   52 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNAD   52 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcE
Confidence            5777877 79999999999999999999999987776666666555543

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.65  E-value=0.0083  Score=41.31  Aligned_cols=41  Identities=12%  Similarity=0.133  Sum_probs=35.5

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      ..-|.+.+-||.|-+|..+|+.|.++|++|.+.|++.....
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~   47 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA   47 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc
Confidence            34567888999999999999999999999999999876544

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.57  E-value=0.0076  Score=42.01  Aligned_cols=40  Identities=18%  Similarity=0.307  Sum_probs=33.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      .|++++|.|+ +++|...+.-+...|++|+.+++++++.+.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~   66 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLEL   66 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHh
Confidence            4778999875 999999888888889999999998876543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.54  E-value=0.023  Score=44.27  Aligned_cols=32  Identities=19%  Similarity=0.346  Sum_probs=28.1

Q ss_pred             CeEEEeCCCCCchHHHHHHHHH-CCCEEEEEcC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQ-HKVTLVCWDI  133 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~-~Ga~Vvi~~r  133 (159)
                      ..++||||+|=||..++++|.+ .|++|+++|+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~   35 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDS   35 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEec
Confidence            3689999999999999999975 7899998873

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.39  E-value=0.0098  Score=41.54  Aligned_cols=41  Identities=20%  Similarity=0.375  Sum_probs=34.6

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      |++-|.|+ |.+|.++|..|+++|++|.+.+|++++.++..+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            56777777 889999999999999999999999877665543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.35  E-value=0.0062  Score=43.93  Aligned_cols=43  Identities=21%  Similarity=0.219  Sum_probs=35.3

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      |.+-|-|+ |-+|.++|..++..|++|.+.|++++.+++..+.+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i   47 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEA   47 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhh
Confidence            44667777 77999999999999999999999988776655544

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=95.23  E-value=0.003  Score=49.59  Aligned_cols=31  Identities=26%  Similarity=0.415  Sum_probs=26.6

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEE-EcC
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVC-WDI  133 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi-~~r  133 (159)
                      .++||||+|=||..++++|.+.|+++++ +++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            4899999999999999999999997554 553

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=95.22  E-value=0.0058  Score=45.39  Aligned_cols=29  Identities=24%  Similarity=0.473  Sum_probs=26.2

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCC-EEEEEc
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKV-TLVCWD  132 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~  132 (159)
                      ++||||+|=||..++++|.++|. .|+++|
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d   31 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVD   31 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEE
Confidence            79999999999999999999996 577776

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.20  E-value=0.0097  Score=42.60  Aligned_cols=42  Identities=10%  Similarity=-0.042  Sum_probs=30.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEE-EcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVC-WDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi-~~r~~~~~~~~  141 (159)
                      ++++++|+||++|+|...++-....|+++++ ++.++++.+++
T Consensus        30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l   72 (187)
T d1vj1a2          30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFL   72 (187)
T ss_dssp             SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhh
Confidence            4589999999999999877666668987554 45555444433

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.13  E-value=0.01  Score=41.45  Aligned_cols=41  Identities=22%  Similarity=0.369  Sum_probs=34.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~  140 (159)
                      .|++++|.|+++++|...+..+...| .+|+++++++++.+.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~   68 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEA   68 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHH
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHH
Confidence            47899999999999999988888788 488889988765443

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.11  E-value=0.019  Score=40.30  Aligned_cols=41  Identities=15%  Similarity=0.249  Sum_probs=34.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~  141 (159)
                      .|.+++|.|+ +|+|...+..++..|+ +|+.+++++++.+..
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a   69 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA   69 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH
Confidence            5789999988 7899999999999885 788899998876544

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=95.09  E-value=0.011  Score=44.04  Aligned_cols=37  Identities=14%  Similarity=0.151  Sum_probs=31.4

Q ss_pred             CCCCCCeEEEeC----------------CCCCchHHHHHHHHHCCCEEEEEcC
Q psy2040          97 KSLEGEIILLTG----------------AGNGIGRELAKQFVQHKVTLVCWDI  133 (159)
Q Consensus        97 ~~l~gk~~lITG----------------~s~GIG~~ia~~la~~Ga~Vvi~~r  133 (159)
                      .++.|+.++||+                +||..|.++|+++.++|++|.++.-
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g   54 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSG   54 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhc
Confidence            578899999997                4677999999999999999987543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.07  E-value=0.019  Score=40.06  Aligned_cols=39  Identities=18%  Similarity=0.244  Sum_probs=32.7

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      .|++++|.|+ +|+|...+.-....|++++++++++++.+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~   68 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE   68 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH
Confidence            4789999986 89999888777778999999998887654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.06  E-value=0.0089  Score=41.64  Aligned_cols=35  Identities=14%  Similarity=0.085  Sum_probs=29.6

Q ss_pred             CCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         109 AGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       109 ~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      |.|-+|..+|+.|.+.|++|++.||+++..++..+
T Consensus         7 G~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~   41 (165)
T d2f1ka2           7 GLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE   41 (165)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             eecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH
Confidence            55899999999999999999999999876665443

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.014  Score=40.83  Aligned_cols=40  Identities=20%  Similarity=0.174  Sum_probs=33.4

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~  140 (159)
                      .|.+++|.|+ +++|...+.-+...|+ +|+++++++++++.
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~   66 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSK   66 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHH
Confidence            4678999976 9999999988888998 79999998876553

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.98  E-value=0.021  Score=39.42  Aligned_cols=41  Identities=20%  Similarity=0.297  Sum_probs=33.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .|++++|.|+ +++|...+......|++|+++++++++.+.+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            4678889865 9999998888888999999999988765533

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=94.92  E-value=0.019  Score=42.24  Aligned_cols=52  Identities=13%  Similarity=0.121  Sum_probs=35.6

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc------cHHHHHHHHHHcCCCeEEE
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK------GNNETKQMLEEQGYKNIHT  155 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~------~~~~~~~ei~~~g~~~v~~  155 (159)
                      .++||||+|=||..++++|.++|..|++.-++.+      ..+++.+.++....+ +++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~~~~~Dl~~~~~~~~~i~~~~~D-~Vi   59 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPD-VIV   59 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCS-EEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEECCCccccCcCCCHHHHHHHHHHcCCC-EEE
Confidence            4899999999999999999999865544333221      345555556655555 443

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=94.91  E-value=0.022  Score=40.39  Aligned_cols=41  Identities=12%  Similarity=0.265  Sum_probs=34.9

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~  141 (159)
                      .|.+++|.|+ +|+|...+..+...|+ +|+.+|+++++++-.
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~A   70 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKA   70 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHH
Confidence            5789999986 8999999999999995 799999998876633

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.81  E-value=0.042  Score=39.23  Aligned_cols=47  Identities=17%  Similarity=0.113  Sum_probs=40.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      .++.||.++|-|.|.=.|+.++.-|.++|++|.++.......++...
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~~   79 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVE   79 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHHh
Confidence            36789999999999999999999999999999999887766655443

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=94.75  E-value=0.021  Score=40.42  Aligned_cols=42  Identities=10%  Similarity=0.090  Sum_probs=34.8

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNET  141 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~  141 (159)
                      -.|.+++|.|+ +|+|...+..+...|+ +|+++|+++++++..
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a   68 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA   68 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHH
Confidence            35789999985 8999999988888886 688899998876544

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.71  E-value=0.024  Score=39.33  Aligned_cols=49  Identities=14%  Similarity=0.216  Sum_probs=39.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      +-.++.+.|.|+ |.+|..+|..++.+|.  ++++.|+++++++..+.+++.
T Consensus         3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~   53 (148)
T d1ldna1           3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNH   53 (148)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhh
Confidence            345667878886 8899999999999884  699999999887777777754

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.69  E-value=0.033  Score=39.91  Aligned_cols=45  Identities=11%  Similarity=0.203  Sum_probs=39.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      .+++||.++|-|.|.=.|+.++.-|+++|+.|.+++.......+.
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~   79 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEE   79 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHH
Confidence            368999999999999999999999999999999998877665543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.54  E-value=0.027  Score=36.98  Aligned_cols=39  Identities=13%  Similarity=0.156  Sum_probs=33.8

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .+++||.++|.|+ |.+|..-++.|.+.|++|.+.+....
T Consensus         8 l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            4788999999998 55999999999999999999876543

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.46  E-value=0.1  Score=35.56  Aligned_cols=51  Identities=10%  Similarity=0.035  Sum_probs=38.2

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc--------cHHHHHHHHHHcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK--------GNNETKQMLEEQGYK  151 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~--------~~~~~~~ei~~~g~~  151 (159)
                      +..+++-.+++-||.++|..|+++|++|.++.+.+.        ......+.+++.|.+
T Consensus        40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~l~~~GV~   98 (156)
T d1djqa2          40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLANYMHFTLEYPNMMRRLHELHVE   98 (156)
T ss_dssp             SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTTTHHHHTTCHHHHHHHHHHTTCE
T ss_pred             CceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCccccccchhHHHHHHHHHhhccce
Confidence            345555567788999999999999999999977542        345566677777754

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.41  E-value=0.073  Score=34.78  Aligned_cols=49  Identities=16%  Similarity=0.262  Sum_probs=37.5

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc--------cHHHHHHHHHHcCCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK--------GNNETKQMLEEQGYK  151 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~--------~~~~~~~ei~~~g~~  151 (159)
                      |.++|-|| |-+|.++|..|++.|.+|.++.+.+.        -.+.+.+.++++|.+
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~il~~~d~~~~~~l~~~l~~~GI~   79 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVE   79 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCE
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecceecccccchhHHHHHHHHHhcCCE
Confidence            67777776 78999999999999999999887543        234455666777765

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.33  E-value=0.014  Score=41.21  Aligned_cols=37  Identities=11%  Similarity=0.104  Sum_probs=32.5

Q ss_pred             CCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040         109 AGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       109 ~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      |.+-+|..+|++|++.|++|.++||++++.+++.++-
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~   44 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN   44 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC
Confidence            5678899999999999999999999998888776653

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.99  E-value=0.032  Score=39.81  Aligned_cols=40  Identities=15%  Similarity=0.334  Sum_probs=35.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      ..+.||+++|.|- +-+|+.+|+.+...|++|.+++.++.+
T Consensus        20 ~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          20 VMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            3578999999987 479999999999999999999998743

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=93.98  E-value=0.017  Score=40.82  Aligned_cols=39  Identities=15%  Similarity=0.238  Sum_probs=32.4

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      +-+-|- +-+|..+|+.|.+.|++|+++||++++.+++.+
T Consensus         5 Ig~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~   43 (176)
T d2pgda2           5 IALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA   43 (176)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH
T ss_pred             EEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence            334443 789999999999999999999999988877654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.93  E-value=0.26  Score=34.95  Aligned_cols=37  Identities=16%  Similarity=0.275  Sum_probs=33.2

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      .+.||++.|-|. |.||+.+++.+...|++|...+++.
T Consensus        39 ~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          39 LIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccCceEEEecc-ccccccceeeeeccccccccccccc
Confidence            478999999987 5699999999999999999999864

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=93.92  E-value=0.033  Score=41.34  Aligned_cols=36  Identities=11%  Similarity=0.148  Sum_probs=30.6

Q ss_pred             CCeEEEeCCCCCchHHH-----HHHHHHCCCEEEEEcCCCc
Q psy2040         101 GEIILLTGAGNGIGREL-----AKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       101 gk~~lITG~s~GIG~~i-----a~~la~~Ga~Vvi~~r~~~  136 (159)
                      ++.++++.|.||.|+.+     |..|+++|.+|.++|.++.
T Consensus        19 ~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          19 EHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             SCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            56677777799999966     7999999999999999865

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=93.90  E-value=0.025  Score=40.02  Aligned_cols=41  Identities=7%  Similarity=0.023  Sum_probs=32.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~  141 (159)
                      .|.+++|.|+ +|+|...+.-....|+ +|+.+++++++.+.+
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a   68 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA   68 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH
Confidence            4778889876 8999998888888897 688899988765443

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=93.88  E-value=0.019  Score=43.60  Aligned_cols=26  Identities=23%  Similarity=0.342  Sum_probs=23.6

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEE
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTL  128 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~V  128 (159)
                      .++||||+|-||..++++|.++|++|
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v   27 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPD   27 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCc
Confidence            48999999999999999999999754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.84  E-value=0.062  Score=35.77  Aligned_cols=49  Identities=18%  Similarity=0.122  Sum_probs=36.9

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc--------cHHHHHHHHHHcCCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK--------GNNETKQMLEEQGYK  151 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~--------~~~~~~~ei~~~g~~  151 (159)
                      |.++|-|| +-+|.++|..|++.|.+|.++.|++.        ..+.+.+.+++.|.+
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~Gv~   79 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVE   79 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCE
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccccccchhhHHHHHHHHHHHHCCCE
Confidence            67888877 45999999999999999999988642        234455556666654

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=93.83  E-value=0.055  Score=38.23  Aligned_cols=39  Identities=13%  Similarity=0.093  Sum_probs=32.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~  139 (159)
                      .|.+++|.| ++|+|...+......|+ +|++.+.++++.+
T Consensus        28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~   67 (174)
T d1e3ia2          28 PGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFP   67 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHH
Confidence            578999997 59999999998889998 5777899887754

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.73  E-value=0.022  Score=39.13  Aligned_cols=35  Identities=20%  Similarity=0.246  Sum_probs=31.6

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDI  133 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r  133 (159)
                      .++||.++|.|| |.+|..-++.|.+.|++|.+++.
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            578999999999 55999999999999999998864

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.69  E-value=0.033  Score=38.68  Aligned_cols=35  Identities=14%  Similarity=0.211  Sum_probs=30.4

Q ss_pred             CCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHH
Q psy2040         109 AGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       109 ~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~  143 (159)
                      |.+-+|..+|+.|+++|++|.+.||++++.++..+
T Consensus         7 GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~   41 (161)
T d1vpda2           7 GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA   41 (161)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence            55889999999999999999999999887766543

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.68  E-value=0.088  Score=34.91  Aligned_cols=49  Identities=16%  Similarity=0.315  Sum_probs=37.1

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC--------ccHHHHHHHHHHcCCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE--------KGNNETKQMLEEQGYK  151 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~--------~~~~~~~~ei~~~g~~  151 (159)
                      |.++|-|| |-||.++|..|++.|++|.++.+++        +-.+.+.+.+++.|.+
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~l~~~d~ei~~~l~~~l~~~GV~   80 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLD   80 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCE
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEeccccchhhhhhhHHHHHHHHHhccce
Confidence            57777776 6799999999999999999987754        2234555666777754

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.63  E-value=0.043  Score=39.31  Aligned_cols=36  Identities=22%  Similarity=0.317  Sum_probs=31.1

Q ss_pred             CCCeEEEeCCCCCchH-----HHHHHHHHCCCEEEEEcCCC
Q psy2040         100 EGEIILLTGAGNGIGR-----ELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~-----~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      +||++.|+|+.||.|+     .+|..|+++|.+|.++|-+.
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            4789999999999999     56788899999999998763

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=93.51  E-value=0.092  Score=36.49  Aligned_cols=46  Identities=13%  Similarity=0.174  Sum_probs=36.6

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      .+.+.|.|+ |++|..+|..++..| +++++.|.+++.++..+.+++.
T Consensus         7 ~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~   53 (154)
T d1pzga1           7 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSH   53 (154)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhh
Confidence            455666786 899999999988888 5899999999887777666643

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.50  E-value=0.13  Score=37.05  Aligned_cols=56  Identities=18%  Similarity=0.207  Sum_probs=44.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++.++=-||+.|   ..+..|+++|++|+.+|.+++-++.+.+..++.+.+ +.+.+.|
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~-i~~~~~d   96 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLK-IEFLQGD   96 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-CEEEESC
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeecccccccccccccccccc-chheehh
Confidence            4567888888877   446778999999999999998888887777777776 7777765

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.48  E-value=0.061  Score=38.47  Aligned_cols=38  Identities=21%  Similarity=0.337  Sum_probs=34.9

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      .+++||.++|-|.|.=.|+.+|..|+++|+.|..++.+
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            47899999999999999999999999999999988654

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=93.33  E-value=0.18  Score=37.86  Aligned_cols=56  Identities=21%  Similarity=0.222  Sum_probs=44.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .|+.++=-|+++|+   ++..+++.|++|+.+|.+++..+.+.+..+..+.+ ..+++.|
T Consensus       120 ~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~-~~~~~~d  175 (254)
T d2nxca1         120 PGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGS  175 (254)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESC
T ss_pred             ccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCc-eeEEecc
Confidence            47889999999885   33456778999999999999999888888777776 6666654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.27  E-value=0.098  Score=34.49  Aligned_cols=50  Identities=12%  Similarity=0.106  Sum_probs=36.8

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc--------cHHHHHHHHHHcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK--------GNNETKQMLEEQGYK  151 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~--------~~~~~~~ei~~~g~~  151 (159)
                      .|.++|-|| |-+|.++|..|++.|.+|.++.|.+.        -.+.+.+.+++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~il~~~d~~~~~~~~~~l~~~gV~   79 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMKKNNIN   79 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCE
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhccccccccHHHHHHHHHHHHhCCCE
Confidence            367777776 77899999999999999999987532        134455556666654

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=93.22  E-value=0.05  Score=37.65  Aligned_cols=46  Identities=20%  Similarity=0.281  Sum_probs=37.0

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCC--CEEEEEcCCCccHHHHHHHHHH
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHK--VTLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      .+.+.|.|+ |.+|..+|..++.+|  .++++.|+++++.+..+.+++.
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~   52 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLED   52 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhc
Confidence            345666785 889999999999988  4799999999887776667653

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=93.16  E-value=0.061  Score=37.04  Aligned_cols=45  Identities=13%  Similarity=0.087  Sum_probs=37.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      .|+.++.-||+.|   ..+..|+++|++|+.+|.+++..+.+.+..++
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~   64 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGE   64 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCS
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhcc
Confidence            5779999999888   36778999999999999999888877666543

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.14  E-value=0.11  Score=37.69  Aligned_cols=57  Identities=18%  Similarity=0.136  Sum_probs=46.2

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..++.++=-||+.|.   .+..++++|.+|+.+|.+++-++.+.+..+..+.+ +.++.+|
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~-v~~~~~d   92 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLK-PRLACQD   92 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCC-CEEECCC
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCcc-ceeeccc
Confidence            446788999998885   67788999999999999998888877777777777 7777665

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.99  E-value=0.44  Score=33.68  Aligned_cols=40  Identities=18%  Similarity=0.267  Sum_probs=34.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      ..+.||++.+.|. ++||+++++.+...|++|+..++....
T Consensus        40 ~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          40 TEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             ccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence            3577899888875 899999999999999999999986543

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.98  E-value=0.11  Score=34.30  Aligned_cols=49  Identities=29%  Similarity=0.275  Sum_probs=35.8

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc-------HHHHHHHHHHcCCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG-------NNETKQMLEEQGYK  151 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~-------~~~~~~ei~~~g~~  151 (159)
                      |.++|-|| +-+|.++|..|++.|.+|.++.+++.-       .+.+.+.+++.|.+
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~GV~   88 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAMFLGLDEELSNMIKDMLEETGVK   88 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSCCTTCCHHHHHHHHHHHHHTTEE
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEeccccccCCCHHHHHHHHHHHHHCCcE
Confidence            56777665 789999999999999999999886532       23345556666643

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=92.91  E-value=0.074  Score=36.79  Aligned_cols=39  Identities=15%  Similarity=0.246  Sum_probs=31.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNN  139 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~  139 (159)
                      .|.+++|.|+ +|+|...+......|+ +|+.+++++++.+
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~   67 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA   67 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH
Confidence            5789999987 5999998888888886 5666778777654

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.90  E-value=0.044  Score=38.09  Aligned_cols=34  Identities=12%  Similarity=0.184  Sum_probs=29.2

Q ss_pred             CCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         109 AGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       109 ~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      |.+-+|.++|++|.++|++|.+.||+.++.++..
T Consensus         8 GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           8 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence            5688999999999999999999999977655543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=92.86  E-value=0.081  Score=39.50  Aligned_cols=47  Identities=21%  Similarity=0.340  Sum_probs=40.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHH
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQM  144 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~e  144 (159)
                      .+++||++.|-|- +..|..+|+.|.+.|++|+..|.+....++..++
T Consensus        35 ~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          35 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            4688999999876 7889999999999999999999887776666554

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=92.78  E-value=0.067  Score=38.46  Aligned_cols=40  Identities=15%  Similarity=0.206  Sum_probs=31.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~  140 (159)
                      .|.+++|.|+ +++|...+......|+ +|++++.++++++.
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~   65 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAH   65 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHh
Confidence            4789999976 8999877777766776 78888988766543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=92.71  E-value=0.063  Score=36.49  Aligned_cols=35  Identities=11%  Similarity=0.172  Sum_probs=29.7

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN  138 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~  138 (159)
                      .+.|.|+ |.+|..++..|++.|.+|.+++|++++.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            3566677 9999999999999999999999987543

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=92.57  E-value=0.41  Score=34.41  Aligned_cols=39  Identities=13%  Similarity=0.338  Sum_probs=34.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ..+.||++.|-|. |.||+.+|+.+...|++|...|+...
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            4578999999976 89999999999999999999987543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.48  E-value=0.22  Score=32.88  Aligned_cols=34  Identities=24%  Similarity=0.244  Sum_probs=28.9

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      +|.++|-|| +-+|-++|..|+++|.+|.++.+.+
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            467777766 8899999999999999999987754

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.34  E-value=0.15  Score=33.27  Aligned_cols=49  Identities=16%  Similarity=0.200  Sum_probs=35.9

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc--------cHHHHHHHHHHcCCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK--------GNNETKQMLEEQGYK  151 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~--------~~~~~~~ei~~~g~~  151 (159)
                      |.++|-|| +-+|.++|..|++.|.+|.++.+.+.        -.+.+.+.++++|.+
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~~l~~~d~~~~~~~~~~l~~~GV~   78 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQ   78 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCE
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecchhhhhcchhhHHHHHHHHHHCCCE
Confidence            45666655 78999999999999999999988542        124445666667654

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=92.25  E-value=0.058  Score=37.90  Aligned_cols=32  Identities=13%  Similarity=0.203  Sum_probs=28.1

Q ss_pred             CeEEEeCCCCCchH-----HHHHHHHHCCCEEEEEcC
Q psy2040         102 EIILLTGAGNGIGR-----ELAKQFVQHKVTLVCWDI  133 (159)
Q Consensus       102 k~~lITG~s~GIG~-----~ia~~la~~Ga~Vvi~~r  133 (159)
                      |..+|||.+.|.|+     .+|..|+++|.+|.++|-
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~   38 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP   38 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence            67899999999999     567999999999998874

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.13  E-value=0.14  Score=33.80  Aligned_cols=50  Identities=20%  Similarity=0.287  Sum_probs=38.2

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc--------cHHHHHHHHHHcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK--------GNNETKQMLEEQGYK  151 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~--------~~~~~~~ei~~~g~~  151 (159)
                      .|.++|-|| +=||.++|..|++.|.+|.++.|++.        -.+.+.+.+++.|.+
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~l~~~d~~~~~~l~~~l~~~GI~   82 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMK   82 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCC
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccccCchhhhcchhhhhhhhhcccce
Confidence            367777776 78999999999999999999887542        234556667777755

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.10  E-value=0.26  Score=35.35  Aligned_cols=59  Identities=20%  Similarity=0.362  Sum_probs=44.1

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .+++|+.++=-|++.|.   ++..++.+|+ +|+.+|.+++..+.+.+.++..+.+ ..++..|
T Consensus        43 ~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~-~~~~~~d  102 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGK-FKVFIGD  102 (201)
T ss_dssp             TSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTS-EEEEESC
T ss_pred             CCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCC-ceEEECc
Confidence            57789999888888772   2334556775 7999999998888887777776776 7666655

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.06  E-value=0.15  Score=33.68  Aligned_cols=35  Identities=26%  Similarity=0.336  Sum_probs=28.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      .+|.++|-|| +-+|.++|..|++.|.+|.++.+.+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            3567777755 7899999999999999999987653

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.04  E-value=0.6  Score=32.91  Aligned_cols=40  Identities=20%  Similarity=0.165  Sum_probs=34.3

Q ss_pred             CCCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          96 EKSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        96 ~~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ...+.++++.|-|. |.||+++++.+...|.+|...++...
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRL   78 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeeccc
Confidence            45688999988875 88999999999999999999998643

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=92.00  E-value=0.078  Score=37.03  Aligned_cols=40  Identities=15%  Similarity=0.089  Sum_probs=30.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEE-EEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTL-VCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~V-vi~~r~~~~~~~  140 (159)
                      .|.+++|.|+ +++|...+..+...|+++ ++.++++++.+.
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~   68 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLEL   68 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHH
Confidence            4788999987 899999998887788865 556777765443

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.97  E-value=0.079  Score=37.84  Aligned_cols=35  Identities=20%  Similarity=0.267  Sum_probs=30.1

Q ss_pred             CeEEEeCCCCCchH-----HHHHHHHHCCCEEEEEcCCCc
Q psy2040         102 EIILLTGAGNGIGR-----ELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       102 k~~lITG~s~GIG~-----~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      |++.|+++.||.|+     .+|..|+++|.+|.++|.+..
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            68999999999999     457888999999999987754

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=91.93  E-value=0.08  Score=36.81  Aligned_cols=40  Identities=18%  Similarity=0.334  Sum_probs=30.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNE  140 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~  140 (159)
                      .|++++|.|+ +++|...+..+...|+ +|+.+++++++.+.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~   72 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKL   72 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHH
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHH
Confidence            3788999875 9999998887777786 66778888765443

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.91  E-value=0.32  Score=31.41  Aligned_cols=51  Identities=18%  Similarity=0.152  Sum_probs=37.8

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc--------HHHHHHHHHHcCCC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG--------NNETKQMLEEQGYK  151 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~--------~~~~~~ei~~~g~~  151 (159)
                      .+|.++|-|| +-+|.++|..|++.|.+|.++.+.+.-        .+.+.+.+++.|.+
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~~l~~~d~~~~~~~~~~l~~~gI~   79 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGME   79 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccchhhcccccchhhhhhhhhhccccE
Confidence            4688888876 789999999999999999998875431        23445556666543

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=91.90  E-value=0.27  Score=34.40  Aligned_cols=49  Identities=16%  Similarity=0.194  Sum_probs=39.9

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHHH
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      ....+.+.|.|+ |.+|..+|..++.+|.  ++++.|++++..+..+.+++.
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h   67 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQH   67 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhc
Confidence            345567777786 8899999999999985  799999999888777777754

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=91.89  E-value=0.63  Score=33.22  Aligned_cols=39  Identities=15%  Similarity=0.267  Sum_probs=34.0

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ..+.||++-|-|. |.||+++|+.+...|++|...++...
T Consensus        45 ~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          45 ARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            4588999988865 89999999999999999999988543

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=91.81  E-value=0.1  Score=35.97  Aligned_cols=45  Identities=18%  Similarity=0.285  Sum_probs=36.5

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      |.+.|.|+ |.+|..+|..++.+|.  ++++.|+++++++..+.+++.
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~   48 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQD   48 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhc
Confidence            56667784 8899999999998884  799999999887776666653

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.79  E-value=0.29  Score=34.27  Aligned_cols=54  Identities=13%  Similarity=0.091  Sum_probs=41.4

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ..++=-||+.|.   .+..+++.|++|+.+|.+++..+.+.+...+.+.+ ...+..|
T Consensus        39 ~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~-~~~~~~d   92 (226)
T d1ve3a1          39 GKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESN-VEFIVGD   92 (226)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-CEEEECC
T ss_pred             CEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccc-ccccccc
Confidence            467888888875   56788899999999999988888877777666655 5555443

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.75  E-value=0.17  Score=35.40  Aligned_cols=48  Identities=19%  Similarity=0.173  Sum_probs=38.4

Q ss_pred             CCCCeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHHH
Q psy2040          99 LEGEIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus        99 l~gk~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      ++...+.|.|+ |.+|..+|..++.+|.  ++++.|++++.++..+.+++.
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~   66 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQH   66 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhC
Confidence            44445666685 9999999999999885  799999999888877777764

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.57  E-value=0.37  Score=34.56  Aligned_cols=38  Identities=21%  Similarity=0.302  Sum_probs=33.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      ..+.||++-|-|. |.||+++|+.+...|++|+..|+..
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCcc
Confidence            4678999998876 7899999999999999999998753

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.34  E-value=0.17  Score=36.55  Aligned_cols=43  Identities=21%  Similarity=0.182  Sum_probs=35.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      .++.++.-||+.|   ..+..|+++|++|+.+|.+++..+.+.++.
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            4678999999887   347788999999999999998777666654

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=91.30  E-value=0.14  Score=35.39  Aligned_cols=41  Identities=10%  Similarity=0.170  Sum_probs=32.2

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHH
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNET  141 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~  141 (159)
                      .|.+++|.|+ +|+|...+..++..|+ +|+.+++++++++..
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a   69 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA   69 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHH
Confidence            5788999985 7788888888888876 688889988876543

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=91.28  E-value=0.2  Score=34.01  Aligned_cols=42  Identities=21%  Similarity=0.225  Sum_probs=33.6

Q ss_pred             EEEeCCCCCchHHHHHHHHHCC--CEEEEEcCCCccHHHHHHHHH
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHK--VTLVCWDIDEKGNNETKQMLE  146 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~~~~~~~~~ei~  146 (159)
                      +.|.|+ |.+|..++..++.+|  .++++.|+++++.+....+++
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~   46 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMY   46 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhh
Confidence            456685 899999999999988  479999999988776555543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.26  E-value=0.22  Score=32.62  Aligned_cols=49  Identities=22%  Similarity=0.312  Sum_probs=36.0

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc--------cHHHHHHHHHHcCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK--------GNNETKQMLEEQGY  150 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~--------~~~~~~~ei~~~g~  150 (159)
                      .+.++|-|| +-||.++|..|++.|++|.++.+++.        -.+.+.+.+++.|.
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~ll~~~d~ei~~~l~~~l~~~Gv   78 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGL   78 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTE
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecccCCcccchhHHHHHHHHHhcCc
Confidence            367777776 78999999999999999998876432        23445556666664

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.25  E-value=0.42  Score=33.30  Aligned_cols=56  Identities=13%  Similarity=0.267  Sum_probs=43.6

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCC--CeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY--KNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~--~~v~~~~~D  159 (159)
                      .|..++=-|++.|   .++..+++.+.+|+.+|.+++..+.+.+.+++.|.  + +..+++|
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~-v~~~~gd   90 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDN-VTLMEGD   90 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTT-EEEEESC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcc-eEEEECc
Confidence            4667877788777   33456777888999999999999999888888764  5 7777765

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.13  E-value=0.073  Score=36.60  Aligned_cols=37  Identities=14%  Similarity=0.105  Sum_probs=32.3

Q ss_pred             CCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHH
Q psy2040         109 AGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQML  145 (159)
Q Consensus       109 ~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei  145 (159)
                      |+|-+|.++++.|.+.|.++.+.+|+.++.+++.++.
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            6688999999999999999999999988877776654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=90.93  E-value=0.16  Score=35.94  Aligned_cols=33  Identities=15%  Similarity=0.168  Sum_probs=27.6

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      .|.|+|-|| +=.|.++|..|+++|.+|.+++++
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            456777776 667899999999999999999875

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=90.90  E-value=0.074  Score=36.39  Aligned_cols=36  Identities=8%  Similarity=0.151  Sum_probs=30.4

Q ss_pred             CCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHH
Q psy2040         109 AGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQM  144 (159)
Q Consensus       109 ~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~e  144 (159)
                      |.|-+|.++++.|.+.| .++.+++|++++.+++.++
T Consensus         7 G~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           7 GGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             CCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             cCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            44889999999998877 8999999999887776654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.83  E-value=0.21  Score=32.32  Aligned_cols=49  Identities=16%  Similarity=0.253  Sum_probs=35.4

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc--------cHHHHHHHHHHcCCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK--------GNNETKQMLEEQGYK  151 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~--------~~~~~~~ei~~~g~~  151 (159)
                      |.++|-|| +-+|.++|..|++.|++|.++.+.+.        -.+.+.+.+++.|.+
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~il~~~d~~~~~~l~~~l~~~gV~   78 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIA   78 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCE
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeeeccccccccchhHHHHHHHHHhhcce
Confidence            56666655 78999999999999999999877532        123445556666654

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.82  E-value=0.12  Score=36.94  Aligned_cols=32  Identities=9%  Similarity=-0.000  Sum_probs=27.9

Q ss_pred             CCCCchHHHHHHHHHCCCEEEEEcCCCccHHH
Q psy2040         109 AGNGIGRELAKQFVQHKVTLVCWDIDEKGNNE  140 (159)
Q Consensus       109 ~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~  140 (159)
                      |.|-+|..+|..|++.|.+|++.|.|++..++
T Consensus         7 GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~   38 (202)
T d1mv8a2           7 GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDL   38 (202)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence            66889999999999999999999998765544

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=90.79  E-value=0.13  Score=36.56  Aligned_cols=40  Identities=18%  Similarity=0.277  Sum_probs=35.3

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCcc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKG  137 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~  137 (159)
                      ..+.||+++|.|- +-+|+.+|+++...|++|+++..++-+
T Consensus        19 ~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          19 FLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             ceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            3578999999987 569999999999999999999998844

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=90.58  E-value=0.46  Score=33.52  Aligned_cols=56  Identities=20%  Similarity=0.308  Sum_probs=41.6

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      ++.++=-||+.|.-   +..++++|++|+.+|.+++..+.+.+.+++.+.+++.++++|
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d   71 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGD   71 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcccccccccccccccc
Confidence            46788888887743   466888999999999999887777776766664336666654

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=90.57  E-value=0.14  Score=35.11  Aligned_cols=44  Identities=16%  Similarity=0.181  Sum_probs=32.4

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      |..+ .|+ |.+|..+|..++.+|.  ++++.|++++.++..+.+++.
T Consensus         3 KI~I-IGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~   48 (142)
T d1y6ja1           3 KVAI-IGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINH   48 (142)
T ss_dssp             CEEE-ECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTT
T ss_pred             eEEE-ECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeecc
Confidence            4444 486 9999999999999885  799999999877766667653

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=90.49  E-value=0.22  Score=33.93  Aligned_cols=44  Identities=23%  Similarity=0.158  Sum_probs=34.6

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQMLE  146 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~ei~  146 (159)
                      |.+-|.|+ |.+|..+|..++.++ +++++.|.+++..+..+.+++
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~   46 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLY   46 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhh
Confidence            34555685 899999999999887 489999999987776666654

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=90.43  E-value=0.56  Score=32.71  Aligned_cols=57  Identities=19%  Similarity=0.300  Sum_probs=41.0

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .++.++=-||+.|  . .+..|+++|++|+.+|.+++.++.+.+..++.+.+++.+...|
T Consensus        30 ~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d   86 (198)
T d2i6ga1          30 APGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVD   86 (198)
T ss_dssp             CSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECC
T ss_pred             CCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhhee
Confidence            4456888888655  3 5678899999999999999888888777776665424444433

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.41  E-value=0.21  Score=33.00  Aligned_cols=49  Identities=20%  Similarity=0.165  Sum_probs=36.0

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC-------ccHHHHHHHHHHcCCC
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE-------KGNNETKQMLEEQGYK  151 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~-------~~~~~~~~ei~~~g~~  151 (159)
                      |.++|-|| +-||.++|..|++.|++|.++.++.       +-.+.+.+.++++|.+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~~~l~~~D~~~~~~l~~~l~~~Gv~   76 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIK   76 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESSSSSTTSCHHHHHHHHHHHHHTTEE
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEechhhccCCHHHHHHHHHHHHHCCCE
Confidence            45666665 7899999999999999999987752       1234555666776654

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=90.34  E-value=0.17  Score=34.69  Aligned_cols=40  Identities=18%  Similarity=0.310  Sum_probs=31.0

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQ  143 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~  143 (159)
                      .+.|-| .|-+|.++|+.|.+.|.  +|+..|++++..+...+
T Consensus         3 ~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~   44 (171)
T d2g5ca2           3 NVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD   44 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH
T ss_pred             EEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH
Confidence            466666 48999999999999996  68888998766655443

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=90.29  E-value=0.1  Score=38.45  Aligned_cols=34  Identities=24%  Similarity=0.368  Sum_probs=27.7

Q ss_pred             CeEEEeCCCCCchHH-----HHHHHHHCCCEEEEEcCCCc
Q psy2040         102 EIILLTGAGNGIGRE-----LAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       102 k~~lITG~s~GIG~~-----ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      |.+.|+| .||.|+.     +|..|++.|.+|.++|.+.+
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            4666787 9999995     46789999999999988753

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=90.03  E-value=0.16  Score=35.86  Aligned_cols=34  Identities=15%  Similarity=0.262  Sum_probs=27.6

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      +|.|+|-|| |=-|...|.+|+++|.+|.+.++++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            577888877 4457888999999999999998754

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.81  E-value=0.21  Score=33.84  Aligned_cols=35  Identities=11%  Similarity=0.092  Sum_probs=28.1

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN  139 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~  139 (159)
                      ..+|  |.+-+|..+|+.|.++|.+|...+++.++..
T Consensus         3 IgiI--G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~   37 (152)
T d1i36a2           3 VGFI--GFGEVAQTLASRLRSRGVEVVTSLEGRSPST   37 (152)
T ss_dssp             EEEE--SCSHHHHHHHHHHHHTTCEEEECCTTCCHHH
T ss_pred             EEEE--cHHHHHHHHHHHHHHCCCeEEEEcCchhHHH
Confidence            4444  5688999999999999999999887765543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=89.79  E-value=1.4  Score=30.95  Aligned_cols=38  Identities=18%  Similarity=0.229  Sum_probs=32.5

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      ..+.++++.|-| .|.||+++|+.+...|++|+..++..
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          40 FEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceEEEEee-cccchhhhhhhcccccceEeeccccc
Confidence            457888888885 48999999999999999999998753

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=89.22  E-value=0.27  Score=33.76  Aligned_cols=44  Identities=14%  Similarity=0.171  Sum_probs=34.8

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCc--cHHHHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEK--GNNETKQMLE  146 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~--~~~~~~~ei~  146 (159)
                      .+.|.|++|.+|..+|..++.+|.  ++++.|++++  +++..+.++.
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~   49 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIY   49 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccch
Confidence            378999999999999999999993  8999998864  3444555554

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=89.21  E-value=2  Score=30.30  Aligned_cols=39  Identities=21%  Similarity=0.354  Sum_probs=33.4

Q ss_pred             CCCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040          97 KSLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus        97 ~~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      ..+.||++-|-|. |.||+++|+.+...|.+|...++...
T Consensus        43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ceecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            3567899988876 89999999999999999999987654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=89.19  E-value=0.45  Score=32.71  Aligned_cols=43  Identities=26%  Similarity=0.265  Sum_probs=34.5

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCC-CEEEEEcCCCccHHHHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHK-VTLVCWDIDEKGNNETKQMLE  146 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~G-a~Vvi~~r~~~~~~~~~~ei~  146 (159)
                      .+.|.|+ |++|..+|..+..++ .++++.|++++..+..+.+++
T Consensus         5 KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~   48 (150)
T d1t2da1           5 KIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTS   48 (150)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchh
Confidence            4566684 899999999888887 479999999988777766664

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.11  E-value=0.76  Score=32.93  Aligned_cols=60  Identities=22%  Similarity=0.248  Sum_probs=43.9

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .|..++-.|+++|--.+...+....+.+|+.++.+++..+...+.+++.+.+++..+..|
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d  134 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD  134 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCc
Confidence            367899999888866655555555567899999999988888888877765435555544

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=88.82  E-value=0.1  Score=37.37  Aligned_cols=39  Identities=15%  Similarity=0.321  Sum_probs=30.9

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK  142 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~  142 (159)
                      .+.|-|+ |..|.++|..|++.|.+|.+++|+++..++..
T Consensus         9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2           9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            4566665 66899999999999999999999876555443

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.33  E-value=0.74  Score=33.41  Aligned_cols=58  Identities=28%  Similarity=0.310  Sum_probs=45.3

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      .|..++-.|+++|--.++.-+++  |.+|+.++++++-.+...+.+++.|.+++.++.+|
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd  135 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGD  135 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECc
Confidence            36689999998887777766666  56799999998888888888888775447777766

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=88.22  E-value=0.35  Score=34.14  Aligned_cols=48  Identities=19%  Similarity=0.164  Sum_probs=33.2

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCC-------EEEEEcCCC--ccHHHHHHHHHHc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKV-------TLVCWDIDE--KGNNETKQMLEEQ  148 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga-------~Vvi~~r~~--~~~~~~~~ei~~~  148 (159)
                      .-.+.||||+|+||..++..+++.+.       .+.+.|.++  +.++....+++..
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~   80 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDS   80 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccc
Confidence            34699999999999999999997532       345556544  3345555555543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=88.22  E-value=0.3  Score=32.39  Aligned_cols=49  Identities=14%  Similarity=0.042  Sum_probs=35.5

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc--------cHHHHHHHHHHcCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK--------GNNETKQMLEEQGY  150 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~--------~~~~~~~ei~~~g~  150 (159)
                      .+.++|-|| |=||.++|..|++.|.+|.++.+.+.        -.+.+.+.++++|.
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~il~~~d~~~~~~l~~~l~~~gv   82 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFD   82 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEE
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeeccccccchhhHHHHHHHHHHHcCc
Confidence            367777776 78999999999999999999877532        23344555555553

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.71  E-value=0.43  Score=32.53  Aligned_cols=35  Identities=26%  Similarity=0.433  Sum_probs=30.0

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCcc
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKG  137 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~  137 (159)
                      .+.|.|++|.+|..+|..++.+|.  ++++.|.++.+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~   38 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP   38 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccc
Confidence            478899999999999999999885  68999987643

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.51  E-value=0.88  Score=30.11  Aligned_cols=34  Identities=18%  Similarity=0.303  Sum_probs=28.6

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      +|.++|-|| +=+|.++|..+++.|.+|.++.+.+
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            467777765 7899999999999999999988753

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=87.21  E-value=0.37  Score=35.17  Aligned_cols=53  Identities=19%  Similarity=0.321  Sum_probs=40.4

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCC-------------------ccHHHHHHHHHHcCCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDE-------------------KGNNETKQMLEEQGYK  151 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~-------------------~~~~~~~~ei~~~g~~  151 (159)
                      .++++.++|-|+ ||+|..++..|++.|. ++.++|.+.                   .+.+.+.+.+++.+..
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~   99 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPH   99 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcc
Confidence            366789999984 8999999999999997 677877541                   2456677777776654

>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=87.00  E-value=0.39  Score=35.18  Aligned_cols=35  Identities=14%  Similarity=0.296  Sum_probs=28.2

Q ss_pred             CCeEEEeCCCCCchHH-----HHHHHHHCCCEEEEEcCCCc
Q psy2040         101 GEIILLTGAGNGIGRE-----LAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       101 gk~~lITG~s~GIG~~-----ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .|+++++ |.||.|+.     +|..|+++|.+|.++|.++.
T Consensus         8 p~~i~~s-GKGGVGKTTvaa~lA~~lA~~G~rVLlvD~Dp~   47 (296)
T d1ihua1           8 PPYLFFT-GKGGVGKTSISCATAIRLAEQGKRVLLVSTDPA   47 (296)
T ss_dssp             CSEEEEE-CSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CeEEEEE-CCCcChHHHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4677765 48999995     57899999999999988753

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=86.98  E-value=0.19  Score=33.12  Aligned_cols=37  Identities=11%  Similarity=0.118  Sum_probs=28.4

Q ss_pred             CeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHH
Q psy2040         102 EIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET  141 (159)
Q Consensus       102 k~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~  141 (159)
                      |+++|.|. +.+|.+++++|.  |.++++++.+++..+..
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~   37 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKV   37 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHH
Confidence            57888875 789999999984  55678888888765443

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=86.89  E-value=1  Score=32.05  Aligned_cols=56  Identities=20%  Similarity=0.213  Sum_probs=42.0

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEecC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKRS  159 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~D  159 (159)
                      |..++=-||+.|.   .+..++++|.+|+.+|.+++-++.+.+..++.+.+++.+++.|
T Consensus        17 ~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d   72 (234)
T d1xxla_          17 EHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGT   72 (234)
T ss_dssp             TCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECB
T ss_pred             CCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhcccccccccccccc
Confidence            6678888988884   4457788899999999999887777777766664326666654

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=86.60  E-value=0.28  Score=36.47  Aligned_cols=34  Identities=21%  Similarity=0.320  Sum_probs=27.7

Q ss_pred             CeEEEeCCCCCchHH-----HHHHHHHCCCEEEEEcCCCc
Q psy2040         102 EIILLTGAGNGIGRE-----LAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       102 k~~lITG~s~GIG~~-----ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      |.+.|.| .||.|+.     +|..|+++|.+|.++|.+++
T Consensus         3 r~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ   41 (289)
T d2afhe1           3 RQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK   41 (289)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred             cEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCCC
Confidence            4556776 9999996     47889999999999988754

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=86.13  E-value=0.35  Score=34.59  Aligned_cols=55  Identities=16%  Similarity=0.189  Sum_probs=42.6

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCCeEEEEec
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKR  158 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~~v~~~~~  158 (159)
                      +.++=.|-|+||....+.+.+  .+++|+..|++++..+...+.++..+.+ +.+++.
T Consensus        25 ~~~lD~t~G~Gghs~~il~~~--~~~~vi~~D~d~~~l~~a~~~l~~~~~r-~~~~~~   79 (192)
T d1m6ya2          25 KIILDCTVGEGGHSRAILEHC--PGCRIIGIDVDSEVLRIAEEKLKEFSDR-VSLFKV   79 (192)
T ss_dssp             CEEEETTCTTSHHHHHHHHHC--TTCEEEEEESCHHHHHHHHHHTGGGTTT-EEEEEC
T ss_pred             CEEEEecCCCcHHHHHHHhcC--CCCeEEEeechHHHHHHHHHhhcccccc-ccchhH
Confidence            456778888888888888776  3578999999999888887777666666 666654

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=86.04  E-value=0.3  Score=35.29  Aligned_cols=31  Identities=13%  Similarity=0.243  Sum_probs=26.2

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      ++|-|| +-.|.++|.+|+++|.+|+++++++
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            556655 7789999999999999999999864

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.92  E-value=1.4  Score=32.87  Aligned_cols=57  Identities=18%  Similarity=0.221  Sum_probs=38.1

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHHcC--CCeEEEEecC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~~g--~~~v~~~~~D  159 (159)
                      ..+||+|+--|++.|+   ++..+++.|+ +|+.++.++. .....+..++.+  .+ +..+..|
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~-~~~a~~~~~~~~~~~~-i~~~~~~   92 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEI-LYQAMDIIRLNKLEDT-ITLIKGK   92 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTH-HHHHHHHHHHTTCTTT-EEEEESC
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHH-HHHHHHHHHHhCCCcc-ceEEEee
Confidence            4578999999999885   5666778887 6888888764 344444444444  23 5555543

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=85.79  E-value=1.4  Score=30.38  Aligned_cols=47  Identities=17%  Similarity=0.108  Sum_probs=31.9

Q ss_pred             CCeEEEeCCC-CCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040         101 GEIILLTGAG-NGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK  151 (159)
Q Consensus       101 gk~~lITG~s-~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~  151 (159)
                      |+.++=-|++ |++|    .+.+.+|++|+.++.+++..+.+.+.++..+.+
T Consensus        42 g~~vLDl~~G~G~~~----i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~   89 (171)
T d1ws6a1          42 RGRFLDPFAGSGAVG----LEAASEGWEAVLVEKDPEAVRLLKENVRRTGLG   89 (171)
T ss_dssp             CCEEEEETCSSCHHH----HHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCC
T ss_pred             CCeEEEeccccchhh----hhhhhccchhhhcccCHHHHhhhhHHHHhhccc
Confidence            4444444444 4433    355677999999999998888887777766654

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.67  E-value=0.49  Score=31.97  Aligned_cols=43  Identities=21%  Similarity=0.234  Sum_probs=33.7

Q ss_pred             EEEeCCCCCchHHHHHHHHHCC--CEEEEEcCCCccHHHHHHHHHH
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHK--VTLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~G--a~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      +.|.|+ |++|..+|..++.+|  .++++.|+++++++..+.++..
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~   47 (140)
T d1a5za1           3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIH   47 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccc
Confidence            345585 889999999998887  4799999999887766666543

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=85.49  E-value=0.69  Score=31.44  Aligned_cols=43  Identities=21%  Similarity=0.276  Sum_probs=34.9

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHHH
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      +.|.|+ |.+|..+|..++.+|.  ++++.|+++++++..+.+++.
T Consensus         4 i~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~   48 (143)
T d1llda1           4 LAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQH   48 (143)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHh
Confidence            455585 8899999999999885  799999999887776666654

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.45  E-value=0.51  Score=32.05  Aligned_cols=42  Identities=19%  Similarity=0.112  Sum_probs=33.8

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCCccHHHHHHHHH
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDEKGNNETKQMLE  146 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~~~~~~~~~ei~  146 (159)
                      +.|.|+ |.+|..+|..++.+|.  ++++.|++++..+..+.+++
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~   46 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLA   46 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHh
Confidence            445585 9999999999998884  69999999988777666665

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=85.23  E-value=0.99  Score=28.23  Aligned_cols=40  Identities=23%  Similarity=0.251  Sum_probs=29.9

Q ss_pred             CCCCchH-HHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcCCC
Q psy2040         109 AGNGIGR-ELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK  151 (159)
Q Consensus       109 ~s~GIG~-~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g~~  151 (159)
                      |-+|+|- ++|+-|.++|++|...|+++.   +..+.+++.|.+
T Consensus         8 GIgG~GMs~LA~~L~~~G~~VsGSD~~~~---~~t~~L~~~Gi~   48 (89)
T d1j6ua1           8 GIGGIGMSAVALHEFSNGNDVYGSNIEET---ERTAYLRKLGIP   48 (89)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEECSSCC---HHHHHHHHTTCC
T ss_pred             eECHHHHHHHHHHHHhCCCeEEEEeCCCC---hhHHHHHHCCCe
Confidence            3466665 679999999999999998763   334457777765

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=85.16  E-value=0.52  Score=33.93  Aligned_cols=35  Identities=17%  Similarity=0.229  Sum_probs=28.5

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      +.|.|+|-||+ =-|...|..|+++|.+|.+.++++
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            45778888874 448899999999999999998754

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=84.82  E-value=0.79  Score=32.28  Aligned_cols=37  Identities=14%  Similarity=0.211  Sum_probs=30.8

Q ss_pred             CCCCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCC
Q psy2040          98 SLEGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDE  135 (159)
Q Consensus        98 ~l~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~  135 (159)
                      ...+|.+.|-|| +--|.+.|..++++|++|.+.++++
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            345788888887 5568999999999999999998865

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.72  E-value=2.1  Score=28.66  Aligned_cols=58  Identities=17%  Similarity=0.153  Sum_probs=39.9

Q ss_pred             CCCCCeEEEeCCCCC-chHHHHHHHHHCCC-EEEEEcCCCccHHHHHHHHHHcCCCe-EEEEecC
Q psy2040          98 SLEGEIILLTGAGNG-IGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEEQGYKN-IHTYKRS  159 (159)
Q Consensus        98 ~l~gk~~lITG~s~G-IG~~ia~~la~~Ga-~Vvi~~r~~~~~~~~~~ei~~~g~~~-v~~~~~D  159 (159)
                      .++|+.++=.|++.| +|.    +.+.+|+ +|+.++.+++..+.+.+.++..+..+ +..++.|
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D   72 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKME   72 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSC
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhccc
Confidence            357888777776655 443    4456786 79999999988888877777665421 6666655

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=84.71  E-value=0.44  Score=32.57  Aligned_cols=46  Identities=22%  Similarity=0.184  Sum_probs=31.9

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCC---------EEEEEcCCCccHHHHHHHHHHc
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKV---------TLVCWDIDEKGNNETKQMLEEQ  148 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga---------~Vvi~~r~~~~~~~~~~ei~~~  148 (159)
                      .+.|+||+|.+|..++..++..+.         +++..+.+.+.++....+++..
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   60 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC   60 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcc
Confidence            689999999999999999998663         1222344555556555555543

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=84.62  E-value=0.31  Score=36.07  Aligned_cols=32  Identities=13%  Similarity=0.313  Sum_probs=21.0

Q ss_pred             eEEEeCCCCCc---hHHHHHHHHHCCCEEEEEcCC
Q psy2040         103 IILLTGAGNGI---GRELAKQFVQHKVTLVCWDID  134 (159)
Q Consensus       103 ~~lITG~s~GI---G~~ia~~la~~Ga~Vvi~~r~  134 (159)
                      ..+.|||+||-   ..+++++|.++|++|..++..
T Consensus         3 ili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           3 LMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             EEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             EEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            44444443333   336889999999999876543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=83.40  E-value=0.49  Score=32.31  Aligned_cols=35  Identities=17%  Similarity=0.161  Sum_probs=27.8

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCE-EEEEcCCCc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVT-LVCWDIDEK  136 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~-Vvi~~r~~~  136 (159)
                      +|.++|-|| |=.|.+.|..|+++|++ |.+.+++..
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            566777776 56789999999999984 888888654

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.18  E-value=2.2  Score=30.68  Aligned_cols=50  Identities=18%  Similarity=0.193  Sum_probs=40.7

Q ss_pred             CCCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHHcC
Q psy2040         100 EGEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG  149 (159)
Q Consensus       100 ~gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~~g  149 (159)
                      .|..++-.|+++|--.++.-++...+.+|+.++++++..+...+.+++.+
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~  125 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDD  125 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHC
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccC
Confidence            47799999999998777777777777899999999988888777776543

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=83.17  E-value=1.1  Score=28.69  Aligned_cols=50  Identities=20%  Similarity=0.151  Sum_probs=33.6

Q ss_pred             CCeEEEeCCCCCchHHHHHHHH---HCCCEEEEEcCCCc--------cHHHHHHHHHHcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFV---QHKVTLVCWDIDEK--------GNNETKQMLEEQGYK  151 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la---~~Ga~Vvi~~r~~~--------~~~~~~~ei~~~g~~  151 (159)
                      .|.++|-|| +-+|.++|..+.   .+|.+|.++.+.+.        -.+.+.+.+++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~iL~~~d~~~~~~l~~~l~~~GV~   80 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREELTKQLTANGIQ   80 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCE
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccchhhcccchHHHHHHHHHHHhcCcE
Confidence            467788877 889999996555   45668988876432        234455566777654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.53  E-value=0.65  Score=32.31  Aligned_cols=40  Identities=15%  Similarity=0.333  Sum_probs=29.8

Q ss_pred             EEeCCCCCchHHHHHHHHHCCCEEEEEcCCCccHHHHHHHHHH
Q psy2040         105 LLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE  147 (159)
Q Consensus       105 lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~~~~~~~~ei~~  147 (159)
                      -|-| +|..|.++|..|++.|.+|.+++|+.+  ++..+.+++
T Consensus         4 ~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~--~~~~~~i~~   43 (180)
T d1txga2           4 SILG-AGAMGSALSVPLVDNGNEVRIWGTEFD--TEILKSISA   43 (180)
T ss_dssp             EEES-CCHHHHHHHHHHHHHCCEEEEECCGGG--HHHHHHHHT
T ss_pred             EEEC-CCHHHHHHHHHHHHCCCEEEEEEeccc--HHHHHHHhh
Confidence            3444 488999999999999999999988654  344555543

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=82.24  E-value=0.92  Score=30.77  Aligned_cols=44  Identities=14%  Similarity=0.204  Sum_probs=33.5

Q ss_pred             eEEEeCCCCCchHHHHHHHHHCCC--EEEEEcCCC--ccHHHHHHHHH
Q psy2040         103 IILLTGAGNGIGRELAKQFVQHKV--TLVCWDIDE--KGNNETKQMLE  146 (159)
Q Consensus       103 ~~lITG~s~GIG~~ia~~la~~Ga--~Vvi~~r~~--~~~~~~~~ei~  146 (159)
                      .+-|.|++|.+|..+|..+..+|.  ++++.|.+.  +..+..+.+++
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~   49 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTN   49 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHH
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchh
Confidence            467899999999999999999985  688998643  34444455554

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=82.21  E-value=0.88  Score=32.21  Aligned_cols=35  Identities=14%  Similarity=0.146  Sum_probs=27.0

Q ss_pred             CCeEEEeCCCCCchHHHHHHHHHCCCEEEEEcCCCc
Q psy2040         101 GEIILLTGAGNGIGRELAKQFVQHKVTLVCWDIDEK  136 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la~~Ga~Vvi~~r~~~  136 (159)
                      .+.|+|.|| |=-|...|..|+++|.+|++.+++++
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            345777776 44477888899999999999998643

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=81.08  E-value=0.62  Score=34.14  Aligned_cols=31  Identities=26%  Similarity=0.423  Sum_probs=25.3

Q ss_pred             EEEeCCCCCchHHHHHHHHHCCC-EEEEEcCCC
Q psy2040         104 ILLTGAGNGIGRELAKQFVQHKV-TLVCWDIDE  135 (159)
Q Consensus       104 ~lITG~s~GIG~~ia~~la~~Ga-~Vvi~~r~~  135 (159)
                      |+|-|| |-+|.++|.+|+++|. +|.+++++.
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            556655 6889999999999996 699998763

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=80.38  E-value=2.2  Score=27.10  Aligned_cols=50  Identities=16%  Similarity=0.068  Sum_probs=33.4

Q ss_pred             CCeEEEeCCCCCchHHHHHHHH---HCCCEEEEEcCCCc--------cHHHHHHHHHHcCCC
Q psy2040         101 GEIILLTGAGNGIGRELAKQFV---QHKVTLVCWDIDEK--------GNNETKQMLEEQGYK  151 (159)
Q Consensus       101 gk~~lITG~s~GIG~~ia~~la---~~Ga~Vvi~~r~~~--------~~~~~~~ei~~~g~~  151 (159)
                      .|.++|-|| +-+|-++|..++   +.|.+|.+..+.+.        -.+.+.+.+++.|.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~il~~~d~~~~~~~~~~l~~~GI~   78 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGIN   78 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEE
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccccccccccchhhHHHHHHHhhCcEE
Confidence            367788876 778899987655   45889998877542        233445556666654