Psyllid ID: psy2266
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 313 | 2.2.26 [Sep-21-2011] | |||||||
| P16152 | 277 | Carbonyl reductase [NADPH | yes | N/A | 0.469 | 0.530 | 0.385 | 2e-24 | |
| Q5RCU5 | 277 | Carbonyl reductase [NADPH | yes | N/A | 0.469 | 0.530 | 0.385 | 2e-24 | |
| P48758 | 277 | Carbonyl reductase [NADPH | yes | N/A | 0.456 | 0.516 | 0.397 | 7e-24 | |
| Q8MI29 | 277 | Carbonyl reductase [NADPH | N/A | N/A | 0.469 | 0.530 | 0.364 | 1e-23 | |
| Q8K354 | 277 | Carbonyl reductase [NADPH | no | N/A | 0.466 | 0.527 | 0.389 | 4e-23 | |
| P47844 | 277 | Carbonyl reductase [NADPH | no | N/A | 0.562 | 0.635 | 0.354 | 6e-23 | |
| O75828 | 277 | Carbonyl reductase [NADPH | no | N/A | 0.469 | 0.530 | 0.385 | 2e-22 | |
| Q28960 | 289 | Carbonyl reductase [NADPH | no | N/A | 0.552 | 0.598 | 0.348 | 5e-22 | |
| P47727 | 277 | Carbonyl reductase [NADPH | no | N/A | 0.469 | 0.530 | 0.378 | 3e-21 | |
| Q3SZD7 | 277 | Carbonyl reductase [NADPH | no | N/A | 0.549 | 0.620 | 0.357 | 5e-21 |
| >sp|P16152|CBR1_HUMAN Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
Query: 146 PGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLF 204
P F +AE T+ TNFF VC L PL++P RVVNV+S + + S EL+Q
Sbjct: 100 PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFR 159
Query: 205 NESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRP 264
+E++TE++L+ +M +V+ K+G ++ GWP +Y V+K+GV LS I LS+ ++
Sbjct: 160 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGD 219
Query: 265 DIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
I++N PG+V TD+ K +PE+G
Sbjct: 220 KILLNACCPGWVRTDMAGPKATKSPEEG 247
|
NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione. Homo sapiens (taxid: 9606) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 8EC: 9 |
| >sp|Q5RCU5|CBR1_PONAB Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
Query: 146 PGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLF 204
P F +AE T+ TNFF VC L PL++P RVVNV+S + + S EL+Q
Sbjct: 100 PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFR 159
Query: 205 NESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRP 264
+E++TE++L+ +M +V+ K+G ++ GWP +Y V+K+GV LS I LS+ ++
Sbjct: 160 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGD 219
Query: 265 DIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
I++N PG+V TD+ K +PE+G
Sbjct: 220 RILLNACCPGWVRTDMAGPKATKSPEEG 247
|
NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 9 |
| >sp|P48758|CBR1_MOUSE Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cbr1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 88/146 (60%), Gaps = 3/146 (2%)
Query: 149 FGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM--LYNVPSQELRQTLFNE 206
F +AE T+ TNFF VC L PL++P RVVNV+S + + L N EL+Q +E
Sbjct: 103 FHIQAEVTMKTNFFGTRDVCKELLPLIKPQGRVVNVSSMVSLRALKNC-RLELQQKFRSE 161
Query: 207 SLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDI 266
++TE++L+ +M +V+ K+G E GWP +Y V+K+GV LS I L++ +R I
Sbjct: 162 TITEEELVGLMNKFVEDTKKGVHAEEGWPNSAYGVTKIGVTVLSRILARKLNEQRRGDKI 221
Query: 267 IVNPVHPGYVNTDLTEHKGVLTPEQG 292
++N PG+V TD+ K +PE+G
Sbjct: 222 LLNACCPGWVRTDMAGPKATKSPEEG 247
|
NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 9 |
| >sp|Q8MI29|CBR1_MACFA Carbonyl reductase [NADPH] 1 OS=Macaca fascicularis GN=CBR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 1/148 (0%)
Query: 146 PGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLF 204
P F +AE T+ TNFF VC L PL++P RVVN++S + + S EL+Q
Sbjct: 100 PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNISSMMSLRALKSCSPELQQKFR 159
Query: 205 NESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRP 264
+E++TE++L+ +M + + K+G ++ GWP +Y V+K+GV LS I LS+ ++
Sbjct: 160 SETITEEELVGLMNKFAEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGD 219
Query: 265 DIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
I++N PG+V TD+ +PE+G
Sbjct: 220 KILLNACCPGWVRTDMAGPSATKSPEEG 247
|
NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione. Macaca fascicularis (taxid: 9541) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 9 |
| >sp|Q8K354|CBR3_MOUSE Carbonyl reductase [NADPH] 3 OS=Mus musculus GN=Cbr3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 88/149 (59%), Gaps = 3/149 (2%)
Query: 146 PGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM--LYNVPSQELRQTL 203
P F +AE TL TNFFA VC L P+++PH RVVN++S G+ L N ++L++
Sbjct: 100 PTPFDIQAEVTLKTNFFATRNVCTELLPIMKPHGRVVNISSLQGLKALENC-REDLQEKF 158
Query: 204 FNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRR 263
++LTE L+D+M +V+ K + GWP+ +Y VSKLGV L+ I L + ++
Sbjct: 159 RCDTLTEVDLVDLMKKFVEDTKNEVHEREGWPDSAYGVSKLGVTVLTRILARQLDEKRKA 218
Query: 264 PDIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
I++N PG+V TD+ +G T E+G
Sbjct: 219 DRILLNACCPGWVKTDMARDQGSRTVEEG 247
|
Has low NADPH-dependent oxidoreductase activity towards 4-benzoylpyridine and menadione (in vitro). Mus musculus (taxid: 10090) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
| >sp|P47844|CBR1_RABIT Carbonyl reductase [NADPH] 1 OS=Oryctolagus cuniculus GN=CBR1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 106/186 (56%), Gaps = 10/186 (5%)
Query: 115 LTEDQLLDMMTDYVQYN-GPLDKILDTAM------DTAPGSFGQRAETTLATNFFALVTV 167
+T+ Q + + D+++ G L+ +++ A+ DT P F +AE T+ TNF V
Sbjct: 64 ITDLQSIRALRDFLRRAYGGLNVLVNNAVIAFKMEDTTP--FHIQAEVTMKTNFDGTRDV 121
Query: 168 CHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKE 226
C L PL+RP RVVNV+S + S EL+Q +E++TE++L+ +M +V+ K+
Sbjct: 122 CTELLPLMRPGGRVVNVSSMTCLRALKSCSPELQQKFRSETITEEELVGLMKKFVEDTKK 181
Query: 227 GKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGV 286
G + GWP+ +Y V+K+GV LS IQ LS+ + I+VN PG+V TD+
Sbjct: 182 GVHQTEGWPDTAYGVTKMGVTVLSRIQARHLSEHRGGDKILVNACCPGWVRTDMGGPNAT 241
Query: 287 LTPEQG 292
+PE+G
Sbjct: 242 KSPEEG 247
|
NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione. Oryctolagus cuniculus (taxid: 9986) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 9 |
| >sp|O75828|CBR3_HUMAN Carbonyl reductase [NADPH] 3 OS=Homo sapiens GN=CBR3 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Query: 146 PGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVAS-KLGMLYNVPSQELRQTLF 204
P F +AE TL TNFFA +C+ L P+++PH RVVN++S + + S++L++
Sbjct: 100 PMPFDIKAEMTLKTNFFATRNMCNELLPIMKPHGRVVNISSLQCLRAFENCSEDLQERFH 159
Query: 205 NESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRP 264
+E+LTE L+D+M +V+ K + GWP Y VSKLGV LS I L + ++
Sbjct: 160 SETLTEGDLVDLMKKFVEDTKNEVHEREGWPNSPYGVSKLGVTVLSRILARRLDEKRKAD 219
Query: 265 DIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
I+VN PG V TD+ + T E+G
Sbjct: 220 RILVNACCPGPVKTDMDGKDSIRTVEEG 247
|
Has low NADPH-dependent oxidoreductase activity towards 4-benzoylpyridine and menadione (in vitro). Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
| >sp|Q28960|CBR1_PIG Carbonyl reductase [NADPH] 1 OS=Sus scrofa GN=CBR1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 102/181 (56%), Gaps = 8/181 (4%)
Query: 119 QLLDMMTDYVQYN-GPLDKILDTA-----MDTAPGSFGQRAETTLATNFFALVTVCHILF 172
Q + + D+++ G LD +++ A +D P F +AE T+ TNF VC L
Sbjct: 68 QSIRALCDFLRKEYGGLDVLVNNAAIAFQLDN-PTPFHIQAELTMKTNFMGTRNVCTELL 126
Query: 173 PLLRPHARVVNVASKLGM-LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKE 231
PL++P RVVNV+S G+ N S EL+Q +E++TE++L+ +M +V+ K G ++
Sbjct: 127 PLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELVGLMNKFVEDTKNGVHRK 186
Query: 232 AGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQ 291
GW + +Y V+K+GV+ LS I L + + I++N PG+V TD+ K +PE
Sbjct: 187 EGWSDSTYGVTKIGVSVLSRIYARKLREQRAGDKILLNACCPGWVRTDMGGPKAPKSPEV 246
Query: 292 G 292
G
Sbjct: 247 G 247
|
NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione. Sus scrofa (taxid: 9823) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 9 |
| >sp|P47727|CBR1_RAT Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus GN=Cbr1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 90/148 (60%), Gaps = 1/148 (0%)
Query: 146 PGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLF 204
P F +AE T+ TNFF VC L P+++P RVVNV+S + + S EL+Q
Sbjct: 100 PTPFHIQAEVTMKTNFFGTQDVCKELLPIIKPQGRVVNVSSSVSLRALKSCSPELQQKFR 159
Query: 205 NESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRP 264
+E++TE++L+ +M +++ AK+G + GWP +Y V+K+GV LS I L++++R
Sbjct: 160 SETITEEELVGLMNKFIEDAKKGVHAKEGWPNSAYGVTKIGVTVLSRIYARKLNEERRED 219
Query: 265 DIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
I++N PG+V TD+ K +PE+G
Sbjct: 220 KILLNACCPGWVRTDMAGPKATKSPEEG 247
|
NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 9 |
| >sp|Q3SZD7|CBR1_BOVIN Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 105/182 (57%), Gaps = 10/182 (5%)
Query: 119 QLLDMMTDYVQYN-GPLDKILDTA------MDTAPGSFGQRAETTLATNFFALVTVCHIL 171
Q + + D+++ G LD +++ A DT P F +AE T+ TNFF VC L
Sbjct: 68 QSIRALRDFLRKEYGGLDVLVNNAGIAFKTADTTP--FHIQAEVTMKTNFFGTRDVCTEL 125
Query: 172 FPLLRPHARVVNVASKLGML-YNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDK 230
PL++P RVVNV+S + + S+EL+Q +E++TE++L+ +M +V+ K G +
Sbjct: 126 LPLIKPQGRVVNVSSFVSVNSLKKCSRELQQKFRSETITEEELVGLMNKFVEDTKNGVHR 185
Query: 231 EAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPE 290
+ GWP+ +Y V+K+GV LS I LS+ + I++N PG+V TD+ K +PE
Sbjct: 186 KEGWPDTAYGVTKIGVTVLSRIHARKLSEQRGGDKILLNACCPGWVRTDMGGPKASKSPE 245
Query: 291 QG 292
+G
Sbjct: 246 EG 247
|
NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 313 | ||||||
| 346467597 | 262 | hypothetical protein [Amblyomma maculatu | 0.466 | 0.557 | 0.563 | 3e-42 | |
| 346471833 | 277 | hypothetical protein [Amblyomma maculatu | 0.466 | 0.527 | 0.557 | 9e-42 | |
| 241858242 | 252 | 20-hydroxysteroid dehydrogenase, putativ | 0.472 | 0.587 | 0.536 | 2e-39 | |
| 427785103 | 276 | Putative 20-hydroxysteroid dehydrogenase | 0.504 | 0.572 | 0.502 | 3e-39 | |
| 427787661 | 277 | Putative 20-hydroxysteroid dehydrogenase | 0.504 | 0.570 | 0.502 | 3e-38 | |
| 442755155 | 277 | Putative 20-hydroxysteroid dehydrogenase | 0.466 | 0.527 | 0.530 | 4e-38 | |
| 322800101 | 267 | hypothetical protein SINV_12418 [Solenop | 0.571 | 0.670 | 0.448 | 9e-37 | |
| 442749421 | 277 | Putative 20-hydroxysteroid dehydrogenase | 0.511 | 0.577 | 0.472 | 3e-36 | |
| 332372658 | 282 | unknown [Dendroctonus ponderosae] | 0.565 | 0.627 | 0.439 | 4e-34 | |
| 321468273 | 290 | hypothetical protein DAPPUDRAFT_231053 [ | 0.536 | 0.579 | 0.441 | 4e-34 |
| >gi|346467597|gb|AEO33643.1| hypothetical protein [Amblyomma maculatum] | Back alignment and taxonomy information |
|---|
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/149 (56%), Positives = 113/149 (75%), Gaps = 3/149 (2%)
Query: 144 TAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTL 203
TAP FG++AE T+ TNFF + VC LFPLLRPHARVVNV+S LGML +P +EL++ L
Sbjct: 94 TAP--FGEQAEVTVKTNFFGTLNVCKELFPLLRPHARVVNVSSMLGMLKKIPGEELKKKL 151
Query: 204 FNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRR 263
N ++T ++L +M ++VQ AKEGK+KE GW + +Y+VSK+GV LSFIQ ++D R
Sbjct: 152 SNPNITLEELCSLMEEFVQAAKEGKNKEKGWGQSAYNVSKVGVTVLSFIQQREFNEDSRE 211
Query: 264 PDIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
D++VN VHPG+V+TD+T HKG LTP+QG
Sbjct: 212 -DLVVNAVHPGFVDTDMTSHKGPLTPDQG 239
|
Source: Amblyomma maculatum Species: Amblyomma maculatum Genus: Amblyomma Family: Ixodidae Order: Ixodida Class: Arachnida Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|346471833|gb|AEO35761.1| hypothetical protein [Amblyomma maculatum] | Back alignment and taxonomy information |
|---|
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 83/149 (55%), Positives = 113/149 (75%), Gaps = 3/149 (2%)
Query: 144 TAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTL 203
TAP FG++AE T+ TNFF+ + VC LFPLLRPHARVVNV+S GML +P +EL++ L
Sbjct: 99 TAP--FGEQAEVTVKTNFFSTLNVCKELFPLLRPHARVVNVSSMCGMLQRIPGEELKKKL 156
Query: 204 FNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRR 263
N ++T ++L +M ++VQ AKEGK+KE GW + +Y+VSK+GV LSFIQ ++D R
Sbjct: 157 SNPNITLEELCSLMEEFVQAAKEGKNKEKGWGQSAYNVSKVGVTVLSFIQQREFNEDPRE 216
Query: 264 PDIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
D++VN VHPGYV+TD++ HKG LTP+QG
Sbjct: 217 -DLVVNAVHPGYVDTDMSSHKGPLTPDQG 244
|
Source: Amblyomma maculatum Species: Amblyomma maculatum Genus: Amblyomma Family: Ixodidae Order: Ixodida Class: Arachnida Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|241858242|ref|XP_002416147.1| 20-hydroxysteroid dehydrogenase, putative [Ixodes scapularis] gi|215510361|gb|EEC19814.1| 20-hydroxysteroid dehydrogenase, putative [Ixodes scapularis] | Back alignment and taxonomy information |
|---|
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 112/151 (74%), Gaps = 3/151 (1%)
Query: 144 TAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTL 203
TAP F ++AE T+ TNFF+ ++VC LFPLLRPHARVVNV+S GML +P QELR L
Sbjct: 98 TAP--FAEQAEVTVKTNFFSTLSVCKELFPLLRPHARVVNVSSMCGMLKVIPGQELRDKL 155
Query: 204 FNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRR 263
N ++T ++L+++M +VQ +K+G + + GW + +Y+VSK+GV LSFIQ KD R
Sbjct: 156 NNPNITLEELVELMKKFVQDSKDGVNVKNGWGQSAYNVSKVGVTVLSFIQQREFDKDS-R 214
Query: 264 PDIIVNPVHPGYVNTDLTEHKGVLTPEQGKI 294
D++VN VHPGYV+TD+T H+G LTP+QGK+
Sbjct: 215 SDLVVNAVHPGYVDTDMTSHRGPLTPDQGKL 245
|
Source: Ixodes scapularis Species: Ixodes scapularis Genus: Ixodes Family: Ixodidae Order: Ixodida Class: Arachnida Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|427785103|gb|JAA58003.1| Putative 20-hydroxysteroid dehydrogenase [Rhipicephalus pulchellus] | Back alignment and taxonomy information |
|---|
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 113/167 (67%), Gaps = 9/167 (5%)
Query: 132 GPLDKILDTA------MDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 185
G LD +++ A TAP F ++AE T+ TNFF + VC LFPLLRPHARVVN++
Sbjct: 80 GGLDVLVNNAGIAYKVSSTAP--FSEQAEVTVKTNFFGTLNVCKELFPLLRPHARVVNLS 137
Query: 186 SKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245
S GML +P +E+R+ L N +T D+L +M ++VQ AK+GK+ E GW +Y+VSK+G
Sbjct: 138 SVCGMLKRIPGKEVRKRLCNPDITLDELCSLMEEFVQAAKDGKNDEKGWGHSAYNVSKVG 197
Query: 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
+ LSFIQ D R D++VN VHPGYV+TD+T HKG LTP+QG
Sbjct: 198 ITVLSFIQQREFDNDPRE-DLVVNAVHPGYVDTDMTSHKGPLTPDQG 243
|
Source: Rhipicephalus pulchellus Species: Rhipicephalus pulchellus Genus: Rhipicephalus Family: Ixodidae Order: Ixodida Class: Arachnida Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|427787661|gb|JAA59282.1| Putative 20-hydroxysteroid dehydrogenase [Rhipicephalus pulchellus] | Back alignment and taxonomy information |
|---|
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 113/167 (67%), Gaps = 9/167 (5%)
Query: 132 GPLDKILDTA------MDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 185
G LD +++ A TAP F ++AE T+ TNFF + V LFPLLRPHARVVN++
Sbjct: 81 GGLDVLVNNAGIAYKNASTAP--FAEQAEVTVKTNFFGTLNVWKELFPLLRPHARVVNLS 138
Query: 186 SKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245
S GML +P +EL++ L N +T ++L +M D+VQ AK+GK+ E GW + +Y VSK+G
Sbjct: 139 SSAGMLQRIPGEELKKKLNNPEITLEELCGLMNDFVQAAKDGKNAEKGWGQSAYVVSKVG 198
Query: 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
V LSFIQ + D R D++VN VHPG+V+TD+T HKG LTPEQG
Sbjct: 199 VTVLSFIQQREFNADPRD-DLVVNAVHPGFVDTDMTSHKGPLTPEQG 244
|
Source: Rhipicephalus pulchellus Species: Rhipicephalus pulchellus Genus: Rhipicephalus Family: Ixodidae Order: Ixodida Class: Arachnida Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|442755155|gb|JAA69737.1| Putative 20-hydroxysteroid dehydrogenase [Ixodes ricinus] | Back alignment and taxonomy information |
|---|
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 107/149 (71%), Gaps = 3/149 (2%)
Query: 144 TAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTL 203
TAP F ++AE T+ TNFF+ ++VC LFPLLRPHARVVNV+S GML +P QELR
Sbjct: 98 TAP--FAEQAEVTVKTNFFSTLSVCKELFPLLRPHARVVNVSSMCGMLKVIPGQELRDKF 155
Query: 204 FNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRR 263
N +T ++L+++M +VQ +K+G + E GW +Y++SK+GV LSFIQ KD R
Sbjct: 156 NNPDITLEELVELMKKFVQDSKDGVNVENGWGRSAYNISKVGVTVLSFIQQREFDKDSRS 215
Query: 264 PDIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
D++VN VHPGYV+TD+T H+G LTP+QG
Sbjct: 216 -DLVVNAVHPGYVDTDMTSHRGPLTPDQG 243
|
Source: Ixodes ricinus Species: Ixodes ricinus Genus: Ixodes Family: Ixodidae Order: Ixodida Class: Arachnida Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322800101|gb|EFZ21207.1| hypothetical protein SINV_12418 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 116/185 (62%), Gaps = 6/185 (3%)
Query: 115 LTEDQLLDMMTDYVQYN-GPLDKILDTAMDT----APGSFGQRAETTLATNFFALVTVCH 169
+T+D ++ DY+Q G LD +++ A A SFG +AE T+ N+F+L VC
Sbjct: 55 VTDDDSVNTFRDYLQNTYGGLDVLVNNAAIAFKMNATESFGDQAEETIRVNYFSLRRVCT 114
Query: 170 ILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKD 229
L+PLLRPHARVV+V+S G L N+ + L+Q + + +LTE +L +M D+V AK G
Sbjct: 115 ALYPLLRPHARVVHVSSSAGRLSNITGEALKQKIADPNLTETELDKIMHDFVNAAKSGTH 174
Query: 230 KEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTP 289
EAGW +Y SK+GV L+ I + + D R DI VN VHPGYV+TD+T HKG LTP
Sbjct: 175 IEAGWSNSTYVASKIGVTALACIHQSMFNADSRE-DIAVNAVHPGYVDTDMTSHKGTLTP 233
Query: 290 EQGKI 294
+QG +
Sbjct: 234 DQGAV 238
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|442749421|gb|JAA66870.1| Putative 20-hydroxysteroid dehydrogenase [Ixodes ricinus] | Back alignment and taxonomy information |
|---|
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 112/165 (67%), Gaps = 5/165 (3%)
Query: 132 GPLDKILDTA----MDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASK 187
G LD +++ A +A F ++AE T+ TNFF+ + VC LFPLLRPHARVV+V+S+
Sbjct: 80 GGLDVLVNNAGIAFKRSATEPFAEQAEVTVKTNFFSTLNVCKELFPLLRPHARVVHVSSE 139
Query: 188 LGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247
LGML P QEL+ N +T ++L D+M +VQ +K+G + + GW +Y+VSK+GV
Sbjct: 140 LGMLKVTPGQELKDKFRNPDITLEELCDLMNQFVQDSKDGANVDKGWGSSAYNVSKVGVT 199
Query: 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
L+FIQ + D R D++VN VHPGYV TD++ H+G+LTP+QG
Sbjct: 200 VLTFIQQRDFNGDSRE-DLVVNAVHPGYVTTDMSSHRGLLTPDQG 243
|
Source: Ixodes ricinus Species: Ixodes ricinus Genus: Ixodes Family: Ixodidae Order: Ixodida Class: Arachnida Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332372658|gb|AEE61471.1| unknown [Dendroctonus ponderosae] | Back alignment and taxonomy information |
|---|
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
Query: 116 TEDQLLDMMTDYVQYN-GPLDKILDTAM----DTAPGSFGQRAETTLATNFFALVTVCHI 170
T+ +D + ++ N G D +++ A + AP F ++A+TT+A N+FA + VC
Sbjct: 64 TDQNSIDKLKKHISENHGGFDLLVNNAAIAFKNAAPEPFSEQAKTTIAVNYFATLKVCEA 123
Query: 171 LFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDK 230
LFPLLR +ARVVN++S G L +PS++LRQ L + +LT QL +M +V+ AK+ K +
Sbjct: 124 LFPLLRANARVVNLSSSAGHLSRIPSEQLRQKLNDPNLTVAQLNQLMEKFVEDAKDNKHQ 183
Query: 231 EAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPE 290
EAGW +Y VSK+GV+ L+ IQ K+ +I VN VHPGYV+TD+T HKG T E
Sbjct: 184 EAGWGNSAYVVSKVGVSALTKIQQREFDKETPCRNISVNSVHPGYVDTDMTSHKGPWTIE 243
Query: 291 QG 292
QG
Sbjct: 244 QG 245
|
Source: Dendroctonus ponderosae Species: Dendroctonus ponderosae Genus: Dendroctonus Family: Curculionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|321468273|gb|EFX79259.1| hypothetical protein DAPPUDRAFT_231053 [Daphnia pulex] | Back alignment and taxonomy information |
|---|
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 115/179 (64%), Gaps = 11/179 (6%)
Query: 126 DYVQYN-GPLDKILDTAM----DTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHAR 180
DY++ G LD +++ A + AP F ++A T+ TNFF + C+I+FPLL+PHAR
Sbjct: 75 DYLKSEYGGLDVLVNNAAIAFKNDAPEPFSEQATLTMRTNFFNTLRFCNIIFPLLKPHAR 134
Query: 181 VVNVASKLGMLYNVP-----SQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWP 235
VVNV+S +G L +P S LR+ L + LT ++L+ M+ D+V+ A+ G ++ GWP
Sbjct: 135 VVNVSSSVGHLRKIPGDDDVSVALRKKLSSSDLTVEELVKMIEDFVKAAQTGNHQKLGWP 194
Query: 236 EFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKI 294
+YS SK+G++ L+ IQ D R DI+VN VHPGYV+TD+T HKG LT EQG +
Sbjct: 195 NSAYSTSKIGISALTRIQQKAFDHDSRE-DIVVNSVHPGYVDTDMTSHKGPLTIEQGAV 252
|
Source: Daphnia pulex Species: Daphnia pulex Genus: Daphnia Family: Daphniidae Order: Diplostraca Class: Branchiopoda Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 313 | ||||||
| UNIPROTKB|F1N8Y3 | 276 | CBR1 "Uncharacterized protein" | 0.597 | 0.677 | 0.358 | 8.4e-26 | |
| UNIPROTKB|F1P2X1 | 277 | CBR1 "Uncharacterized protein" | 0.597 | 0.675 | 0.358 | 8.4e-26 | |
| UNIPROTKB|F1SGX4 | 277 | CBR3 "Uncharacterized protein" | 0.485 | 0.548 | 0.430 | 4.6e-25 | |
| ZFIN|ZDB-GENE-030902-2 | 276 | cbr1 "carbonyl reductase 1" [D | 0.600 | 0.681 | 0.335 | 9.7e-25 | |
| RGD|2286 | 277 | Cbr1 "carbonyl reductase 1" [R | 0.492 | 0.555 | 0.371 | 1.6e-24 | |
| UNIPROTKB|P16152 | 277 | CBR1 "Carbonyl reductase [NADP | 0.600 | 0.678 | 0.348 | 2e-24 | |
| UNIPROTKB|Q3SZD7 | 277 | CBR1 "Carbonyl reductase [NADP | 0.597 | 0.675 | 0.353 | 2e-24 | |
| UNIPROTKB|Q5RCU5 | 277 | CBR1 "Carbonyl reductase [NADP | 0.600 | 0.678 | 0.348 | 2.6e-24 | |
| RGD|2321756 | 277 | LOC100360601 "carbonyl reducta | 0.571 | 0.646 | 0.363 | 2.6e-24 | |
| RGD|1309728 | 277 | Cbr3 "carbonyl reductase 3" [R | 0.565 | 0.638 | 0.380 | 3.3e-24 |
| UNIPROTKB|F1N8Y3 CBR1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 72/201 (35%), Positives = 120/201 (59%)
Query: 110 LFNESLTED-QLLDMMTDYVQYN-GPLDKILDTA------MDTAPGSFGQRAETTLATNF 161
LF++ +D Q + ++ D+++ G L+ +++ A D P F +AE TL TNF
Sbjct: 57 LFHQLDIDDLQSIKVLRDFLKEKYGGLNVLVNNAGIAFKVSDRTP--FAVQAEVTLKTNF 114
Query: 162 FALVTVCHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLFNESLTEDQLLDMMTDY 220
F +C L PL++P+ RVVNV+S + + SQEL++ ++++TED+L+++MT +
Sbjct: 115 FGTRNICTELLPLIKPYGRVVNVSSMVSISALGGCSQELQKKFRSDTITEDELVELMTKF 174
Query: 221 VQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPD-IIVNPVHPGYVNTD 279
V+ K+ ++ GWP +Y VSK+GV LS IQ A + +KR+ D I++N PG+V TD
Sbjct: 175 VEDTKKSVHEKEGWPNTAYGVSKIGVTVLSRIQ-ARMLNEKRKGDHILLNACCPGWVRTD 233
Query: 280 LTEHKGVLTPEQGKIRQKIYL 300
+ K +PE+G +YL
Sbjct: 234 MAGPKAPKSPEEGA-ETPVYL 253
|
|
| UNIPROTKB|F1P2X1 CBR1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 72/201 (35%), Positives = 120/201 (59%)
Query: 110 LFNESLTED-QLLDMMTDYVQYN-GPLDKILDTA------MDTAPGSFGQRAETTLATNF 161
LF++ +D Q + ++ D+++ G L+ +++ A D P F +AE TL TNF
Sbjct: 58 LFHQLDIDDLQSIKVLRDFLKEKYGGLNVLVNNAGIAFKVSDRTP--FAVQAEVTLKTNF 115
Query: 162 FALVTVCHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLFNESLTEDQLLDMMTDY 220
F +C L PL++P+ RVVNV+S + + SQEL++ ++++TED+L+++MT +
Sbjct: 116 FGTRNICTELLPLIKPYGRVVNVSSMVSISALGGCSQELQKKFRSDTITEDELVELMTKF 175
Query: 221 VQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPD-IIVNPVHPGYVNTD 279
V+ K+ ++ GWP +Y VSK+GV LS IQ A + +KR+ D I++N PG+V TD
Sbjct: 176 VEDTKKSVHEKEGWPNTAYGVSKIGVTVLSRIQ-ARMLNEKRKGDHILLNACCPGWVRTD 234
Query: 280 LTEHKGVLTPEQGKIRQKIYL 300
+ K +PE+G +YL
Sbjct: 235 MAGPKAPKSPEEGA-ETPVYL 254
|
|
| UNIPROTKB|F1SGX4 CBR3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 68/158 (43%), Positives = 96/158 (60%)
Query: 146 PGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM--LYNVPSQELRQTL 203
P F +AE TL TNFF VC L P+++PH RVVN++S LG L N S++L++
Sbjct: 100 PTPFDIQAEMTLKTNFFGTRNVCIELLPIIKPHGRVVNISSLLGSKALENC-SEDLQEKF 158
Query: 204 FNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRR 263
E+LTE+ L+D+M +V+ AK + GWP +Y VSKLGV LS I L +KR+
Sbjct: 159 RCEALTEEDLVDLMKKFVEDAKNEVHEREGWPSSAYGVSKLGVTVLSRILAQRLD-EKRK 217
Query: 264 PD-IIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYL 300
D I++N PG+V TD+T +G T E+G + +YL
Sbjct: 218 ADRILLNACCPGWVKTDMTGGQGFETVEEGAVTP-VYL 254
|
|
| ZFIN|ZDB-GENE-030902-2 cbr1 "carbonyl reductase 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 67/200 (33%), Positives = 111/200 (55%)
Query: 110 LFNE-SLTEDQLLDMMTDYVQYN-GPLDKILDTA------MDTAPGSFGQRAETTLATNF 161
LF++ + + + D+ Q G LD +++ A DT P FG +A+ TL TNF
Sbjct: 57 LFHQLDINDPNSVRTARDFFQEKYGGLDVLINNAGIAFKMADTTP--FGTQADVTLKTNF 114
Query: 162 FALVTVCHILFPLLRPHARVVNVASKLG-MLYNVPSQELRQTLFNESLTEDQLLDMMTDY 220
FA +C++ P+++P R+VNV+S +G M S EL+ ++ +TE++L +M +
Sbjct: 115 FATRDMCNVFLPIIKPGGRLVNVSSGMGSMALGRCSPELQARFRSDDITEEELNGLMERF 174
Query: 221 VQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280
V+ A+EG E GWP +Y +SK G+ L+ IQ L+K++ I+ N PG+V TD+
Sbjct: 175 VREAQEGVHSERGWPSTAYGISKTGLTTLTRIQARNLTKERPGDGILCNACCPGWVRTDM 234
Query: 281 TEHKGVLTPEQGKIRQKIYL 300
+P++G I +YL
Sbjct: 235 AGPNATKSPDEGAITP-VYL 253
|
|
| RGD|2286 Cbr1 "carbonyl reductase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 58/156 (37%), Positives = 93/156 (59%)
Query: 146 PGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLF 204
P F +AE T+ TNFF VC L P+++P RVVNV+S + + S EL+Q
Sbjct: 100 PTPFHIQAEVTMKTNFFGTQDVCKELLPIIKPQGRVVNVSSSVSLRALKSCSPELQQKFR 159
Query: 205 NESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRP 264
+E++TE++L+ +M +++ AK+G + GWP +Y V+K+GV LS I L++++R
Sbjct: 160 SETITEEELVGLMNKFIEDAKKGVHAKEGWPNSAYGVTKIGVTVLSRIYARKLNEERRED 219
Query: 265 DIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYL 300
I++N PG+V TD+ K +PE+G +YL
Sbjct: 220 KILLNACCPGWVRTDMAGPKATKSPEEGA-ETPVYL 254
|
|
| UNIPROTKB|P16152 CBR1 "Carbonyl reductase [NADPH] 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 69/198 (34%), Positives = 113/198 (57%)
Query: 111 FNESLTED-QLLDMMTDYV--QYNGPLDKILDTA---MDTA-PGSFGQRAETTLATNFFA 163
F++ +D Q + + D++ +Y G LD +++ A A P F +AE T+ TNFF
Sbjct: 59 FHQLDIDDLQSIRALRDFLRKEYGG-LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFG 117
Query: 164 LVTVCHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQ 222
VC L PL++P RVVNV+S + + S EL+Q +E++TE++L+ +M +V+
Sbjct: 118 TRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVE 177
Query: 223 LAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282
K+G ++ GWP +Y V+K+GV LS I LS+ ++ I++N PG+V TD+
Sbjct: 178 DTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG 237
Query: 283 HKGVLTPEQGKIRQKIYL 300
K +PE+G +YL
Sbjct: 238 PKATKSPEEGA-ETPVYL 254
|
|
| UNIPROTKB|Q3SZD7 CBR1 "Carbonyl reductase [NADPH] 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 71/201 (35%), Positives = 115/201 (57%)
Query: 110 LFNESLTED-QLLDMMTDYV--QYNGPLDKILDTA------MDTAPGSFGQRAETTLATN 160
LF++ +D Q + + D++ +Y G LD +++ A DT P F +AE T+ TN
Sbjct: 58 LFHQLDIDDRQSIRALRDFLRKEYGG-LDVLVNNAGIAFKTADTTP--FHIQAEVTMKTN 114
Query: 161 FFALVTVCHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLFNESLTEDQLLDMMTD 219
FF VC L PL++P RVVNV+S + + S+EL+Q +E++TE++L+ +M
Sbjct: 115 FFGTRDVCTELLPLIKPQGRVVNVSSFVSVNSLKKCSRELQQKFRSETITEEELVGLMNK 174
Query: 220 YVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD 279
+V+ K G ++ GWP+ +Y V+K+GV LS I LS+ + I++N PG+V TD
Sbjct: 175 FVEDTKNGVHRKEGWPDTAYGVTKIGVTVLSRIHARKLSEQRGGDKILLNACCPGWVRTD 234
Query: 280 LTEHKGVLTPEQGKIRQKIYL 300
+ K +PE+G +YL
Sbjct: 235 MGGPKASKSPEEGA-ETPVYL 254
|
|
| UNIPROTKB|Q5RCU5 CBR1 "Carbonyl reductase [NADPH] 1" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
|---|
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 69/198 (34%), Positives = 113/198 (57%)
Query: 111 FNESLTED-QLLDMMTDYV--QYNGPLDKILDTA---MDTA-PGSFGQRAETTLATNFFA 163
F++ +D Q + + D++ +Y G LD +++ A A P F +AE T+ TNFF
Sbjct: 59 FHQLDIDDLQSIRALRDFLRKEYGG-LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFG 117
Query: 164 LVTVCHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQ 222
VC L PL++P RVVNV+S + + S EL+Q +E++TE++L+ +M +V+
Sbjct: 118 TRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVE 177
Query: 223 LAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282
K+G ++ GWP +Y V+K+GV LS I LS+ ++ I++N PG+V TD+
Sbjct: 178 DTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDRILLNACCPGWVRTDMAG 237
Query: 283 HKGVLTPEQGKIRQKIYL 300
K +PE+G +YL
Sbjct: 238 PKATKSPEEGA-ETPVYL 254
|
|
| RGD|2321756 LOC100360601 "carbonyl reductase 2-like" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 69/190 (36%), Positives = 109/190 (57%)
Query: 119 QLLDMMTDYV--QYNGPLDKILDTA----MDTAPGSFGQRAETTLATNFFALVTVCHILF 172
Q + + D++ +Y G LD +++ A T F + E + TNFF VC L
Sbjct: 68 QSICALRDFLRKEYGG-LDVLVNNAGIGSKCTDLNHFHIQREAAMKTNFFGTQAVCTELL 126
Query: 173 PLLRPHARVVNVASKLGM--LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDK 230
PL++ RVVNV+S + + L N S ELRQ +E++TE++L+ +M +V+ AKEG +
Sbjct: 127 PLIKTQGRVVNVSSLISLEALKNC-SPELRQKFRSETITEEELVGLMNKFVEDAKEGVHE 185
Query: 231 EAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPE 290
+ GWP +Y+VSK+GV LS I L++++R I++N PG+V TD+ K +PE
Sbjct: 186 KEGWPNSAYAVSKIGVTVLSRIYARKLNEERRGDKILLNACCPGWVRTDMAGPKATKSPE 245
Query: 291 QGKIRQKIYL 300
+G +YL
Sbjct: 246 EGA-ETPVYL 254
|
|
| RGD|1309728 Cbr3 "carbonyl reductase 3" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 73/192 (38%), Positives = 111/192 (57%)
Query: 119 QLLDMMTDYV--QYNGPLDKILDTA-----MDTAPGSFGQRAETTLATNFFALVTVCHIL 171
Q + + D++ +Y G L+ +++ A MD P F +AE TL TNFFA VC L
Sbjct: 68 QSIRALRDFLRKEYGG-LNVLVNNAGIAFRMDD-PTPFDVQAEVTLKTNFFATRNVCTEL 125
Query: 172 FPLLRPHARVVNVASKLGM--LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKD 229
P+++PH RVVNV+S G+ L N S++L++ ++LTE L+D+M +V+ K
Sbjct: 126 LPIMKPHGRVVNVSSLQGLKALENC-SEDLQERFRCDTLTEGDLVDLMKKFVEDTKNEVH 184
Query: 230 KEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPD-IIVNPVHPGYVNTDLTEHKGVLT 288
+ GWP+ +Y VSKLGV L+ I L +KR+ D I++N PG+V TD+ +G T
Sbjct: 185 EREGWPDSAYGVSKLGVTVLTRILARQLD-EKRKADRILLNACCPGWVKTDMARDQGSRT 243
Query: 289 PEQGKIRQKIYL 300
E+G +YL
Sbjct: 244 VEEGA-ETPVYL 254
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 313 | |||
| cd05324 | 225 | cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu | 7e-29 | |
| cd05324 | 225 | cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu | 1e-20 | |
| cd05327 | 269 | cd05327, retinol-DH_like_SDR_c_like, retinol dehyd | 1e-13 | |
| cd05374 | 248 | cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster | 2e-13 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 2e-12 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 1e-11 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 1e-11 | |
| cd05370 | 228 | cd05370, SDR_c2, classical (c) SDR, subgroup 2 | 2e-11 | |
| PRK06914 | 280 | PRK06914, PRK06914, short chain dehydrogenase; Pro | 7e-11 | |
| PRK05693 | 274 | PRK05693, PRK05693, short chain dehydrogenase; Pro | 1e-09 | |
| PRK05650 | 270 | PRK05650, PRK05650, short chain dehydrogenase; Pro | 1e-09 | |
| PRK07825 | 273 | PRK07825, PRK07825, short chain dehydrogenase; Pro | 3e-09 | |
| PRK08267 | 260 | PRK08267, PRK08267, short chain dehydrogenase; Pro | 4e-09 | |
| PRK06179 | 270 | PRK06179, PRK06179, short chain dehydrogenase; Pro | 6e-09 | |
| cd05347 | 248 | cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena | 1e-08 | |
| COG0300 | 265 | COG0300, DltE, Short-chain dehydrogenases of vario | 2e-08 | |
| PRK12829 | 264 | PRK12829, PRK12829, short chain dehydrogenase; Pro | 2e-08 | |
| PRK12824 | 245 | PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro | 2e-08 | |
| PRK06128 | 300 | PRK06128, PRK06128, oxidoreductase; Provisional | 5e-08 | |
| cd05327 | 269 | cd05327, retinol-DH_like_SDR_c_like, retinol dehyd | 7e-08 | |
| COG3967 | 245 | COG3967, DltE, Short-chain dehydrogenase involved | 2e-07 | |
| cd05323 | 244 | cd05323, ADH_SDR_c_like, insect type alcohol dehyd | 2e-07 | |
| PRK06182 | 273 | PRK06182, PRK06182, short chain dehydrogenase; Val | 2e-07 | |
| cd08931 | 227 | cd08931, SDR_c9, classical (c) SDR, subgroup 9 | 2e-07 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-07 | |
| COG4221 | 246 | COG4221, COG4221, Short-chain alcohol dehydrogenas | 2e-07 | |
| cd09805 | 281 | cd09805, type2_17beta_HSD-like_SDR_c, human 17beta | 3e-07 | |
| cd05333 | 240 | cd05333, BKR_SDR_c, beta-Keto acyl carrier protein | 6e-07 | |
| PRK12745 | 256 | PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote | 7e-07 | |
| PRK12939 | 250 | PRK12939, PRK12939, short chain dehydrogenase; Pro | 7e-07 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 8e-07 | |
| cd05325 | 233 | cd05325, carb_red_sniffer_like_SDR_c, carbonyl red | 1e-06 | |
| PRK06180 | 277 | PRK06180, PRK06180, short chain dehydrogenase; Pro | 2e-06 | |
| cd05337 | 255 | cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl | 2e-06 | |
| PRK07856 | 252 | PRK07856, PRK07856, short chain dehydrogenase; Pro | 2e-06 | |
| PRK12826 | 251 | PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote | 2e-06 | |
| cd05339 | 243 | cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy | 3e-06 | |
| PRK12428 | 241 | PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro | 3e-06 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 4e-06 | |
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 4e-06 | |
| cd05367 | 241 | cd05367, SPR-like_SDR_c, sepiapterin reductase (SP | 4e-06 | |
| PRK09072 | 263 | PRK09072, PRK09072, short chain dehydrogenase; Pro | 6e-06 | |
| PRK08261 | 450 | PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) | 6e-06 | |
| PRK09242 | 257 | PRK09242, PRK09242, tropinone reductase; Provision | 6e-06 | |
| PRK08264 | 238 | PRK08264, PRK08264, short chain dehydrogenase; Val | 6e-06 | |
| cd05346 | 249 | cd05346, SDR_c5, classical (c) SDR, subgroup 5 | 1e-05 | |
| cd05329 | 251 | cd05329, TR_SDR_c, tropinone reductase-I and II (T | 1e-05 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-05 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-05 | |
| PRK12827 | 249 | PRK12827, PRK12827, short chain dehydrogenase; Pro | 1e-05 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 2e-05 | |
| TIGR01830 | 239 | TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier | 2e-05 | |
| PRK12828 | 239 | PRK12828, PRK12828, short chain dehydrogenase; Pro | 3e-05 | |
| cd05325 | 233 | cd05325, carb_red_sniffer_like_SDR_c, carbonyl red | 5e-05 | |
| PRK12937 | 245 | PRK12937, PRK12937, short chain dehydrogenase; Pro | 5e-05 | |
| PRK06197 | 306 | PRK06197, PRK06197, short chain dehydrogenase; Pro | 5e-05 | |
| cd05328 | 250 | cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de | 6e-05 | |
| PRK06841 | 255 | PRK06841, PRK06841, short chain dehydrogenase; Pro | 6e-05 | |
| PRK06124 | 256 | PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro | 6e-05 | |
| cd05354 | 235 | cd05354, SDR_c7, classical (c) SDR, subgroup 7 | 8e-05 | |
| cd05332 | 257 | cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste | 9e-05 | |
| PRK05855 | 582 | PRK05855, PRK05855, short chain dehydrogenase; Val | 1e-04 | |
| PRK07067 | 257 | PRK07067, PRK07067, sorbitol dehydrogenase; Provis | 2e-04 | |
| cd05362 | 243 | cd05362, THN_reductase-like_SDR_c, tetrahydroxynap | 2e-04 | |
| PRK07062 | 265 | PRK07062, PRK07062, short chain dehydrogenase; Pro | 2e-04 | |
| PRK05866 | 293 | PRK05866, PRK05866, short chain dehydrogenase; Pro | 2e-04 | |
| cd05331 | 244 | cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz | 2e-04 | |
| TIGR01829 | 242 | TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta | 2e-04 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 3e-04 | |
| PRK10538 | 248 | PRK10538, PRK10538, malonic semialdehyde reductase | 3e-04 | |
| cd08940 | 258 | cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge | 3e-04 | |
| cd08943 | 250 | cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al | 3e-04 | |
| PRK08589 | 272 | PRK08589, PRK08589, short chain dehydrogenase; Val | 3e-04 | |
| PRK05854 | 313 | PRK05854, PRK05854, short chain dehydrogenase; Pro | 4e-04 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 4e-04 | |
| cd05352 | 252 | cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M | 4e-04 | |
| PRK08217 | 253 | PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-04 | |
| TIGR01963 | 255 | TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | 5e-04 | |
| PRK09135 | 249 | PRK09135, PRK09135, pteridine reductase; Provision | 6e-04 | |
| cd08934 | 243 | cd08934, CAD_SDR_c, clavulanic acid dehydrogenase | 6e-04 | |
| cd05341 | 247 | cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta | 6e-04 | |
| PRK08265 | 261 | PRK08265, PRK08265, short chain dehydrogenase; Pro | 6e-04 | |
| PRK07097 | 265 | PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro | 7e-04 | |
| PRK08267 | 260 | PRK08267, PRK08267, short chain dehydrogenase; Pro | 0.001 | |
| TIGR03206 | 250 | TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy | 0.001 | |
| PRK08628 | 258 | PRK08628, PRK08628, short chain dehydrogenase; Pro | 0.001 | |
| PRK06196 | 315 | PRK06196, PRK06196, oxidoreductase; Provisional | 0.001 | |
| PRK08324 | 681 | PRK08324, PRK08324, short chain dehydrogenase; Val | 0.001 | |
| PRK07069 | 251 | PRK07069, PRK07069, short chain dehydrogenase; Val | 0.001 | |
| cd05366 | 257 | cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol | 0.001 | |
| cd05352 | 252 | cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M | 0.002 | |
| PRK06181 | 263 | PRK06181, PRK06181, short chain dehydrogenase; Pro | 0.002 | |
| PRK07024 | 257 | PRK07024, PRK07024, short chain dehydrogenase; Pro | 0.002 | |
| PRK08220 | 252 | PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy | 0.002 | |
| PRK05565 | 247 | PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) | 0.002 | |
| cd05344 | 253 | cd05344, BKR_like_SDR_like, putative beta-ketoacyl | 0.002 | |
| cd05343 | 250 | cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c | 0.002 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 0.003 | |
| PRK07453 | 322 | PRK07453, PRK07453, protochlorophyllide oxidoreduc | 0.003 | |
| PRK07791 | 286 | PRK07791, PRK07791, short chain dehydrogenase; Pro | 0.003 | |
| cd05355 | 270 | cd05355, SDR_c1, classical (c) SDR, subgroup 1 | 0.003 | |
| PRK08017 | 256 | PRK08017, PRK08017, oxidoreductase; Provisional | 0.003 | |
| cd05357 | 234 | cd05357, PR_SDR_c, pteridine reductase (PR), class | 0.003 | |
| PRK12936 | 245 | PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote | 0.004 | |
| TIGR01831 | 239 | TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote | 0.004 | |
| cd05356 | 239 | cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst | 0.004 | |
| PRK07231 | 251 | PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) | 0.004 | |
| PRK06171 | 266 | PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro | 0.004 | |
| TIGR01832 | 248 | TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena | 0.004 |
| >gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 7e-29
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 7/104 (6%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGS--FGQRAET 62
+ +VRFHQLD+ D +SI D ++ ++GGLD+LVNNAGI S ++A
Sbjct: 46 RAEGLSVRFHQLDVTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARE 105
Query: 63 TLATNFFALVTVCHILFPLLRP--HARVVNVASKLGML---YNV 101
T+ TNFF V V L PLL+ R+VNV+S LG L Y V
Sbjct: 106 TMKTNFFGTVDVTQALLPLLKKSPAGRIVNVSSGLGSLTSAYGV 149
|
PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225 |
| >gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 88.1 bits (219), Expect = 1e-20
Identities = 42/153 (27%), Positives = 56/153 (36%), Gaps = 50/153 (32%)
Query: 142 MDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP--HARVVNVASKLGMLYNVPSQEL 199
++A T+ TNFF V V L PLL+ R+VNV+S LG L
Sbjct: 92 GFDDSTPTREQARETMKTNFFGTVDVTQALLPLLKKSPAGRIVNVSSGLGSL-------- 143
Query: 200 RQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSK 259
A Y VSK + L+ I L+K
Sbjct: 144 ----------------------TSA--------------YGVSKAALNALTRI----LAK 163
Query: 260 DKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
+ + I VN PG+V TD+ K TPE+G
Sbjct: 164 ELKETGIKVNACCPGWVKTDMGGGKAPKTPEEG 196
|
PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225 |
| >gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 69.6 bits (171), Expect = 1e-13
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI----YRDTAPGSFGQRAETT 63
N V QLD+ +S+ + ++ + LD+L+NNAGI R T G F E
Sbjct: 51 NAKVEVIQLDLSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKDG-F----ELQ 105
Query: 64 LATNFFALVTVCHILFPLLR--PHARVVNVAS 93
A N+ + ++L P+L+ +R+VNV+S
Sbjct: 106 FAVNYLGHFLLTNLLLPVLKASAPSRIVNVSS 137
|
Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269 |
| >gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 68.0 bits (167), Expect = 2e-13
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 17/102 (16%)
Query: 6 NNNNNVRFH--QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETT 63
N +LD+ D+ SI ++ + G +D+LVNNAG G FG ET+
Sbjct: 41 GELLNDNLEVLELDVTDEESIKAAVKEVIERFGRIDVLVNNAGY------GLFGPLEETS 94
Query: 64 LA-------TNFFALVTVCHILFPLLR--PHARVVNVASKLG 96
+ N F + V PL+R R+VNV+S G
Sbjct: 95 IEEVRELFEVNVFGPLRVTRAFLPLMRKQGSGRIVNVSSVAG 136
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 2e-12
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ET 62
+ N Q D+ D+ + L ++ + G LD+LVNNAGI R +
Sbjct: 41 IEALGGNAVAVQADVSDEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDR 100
Query: 63 TLATNFFALVTVCHILFPLL--RPHARVVNVASKLGMLYNVPSQ 104
L N + + P + + R+VN++S G L +P Q
Sbjct: 101 VLDVNLTGVFLLTRAALPHMKKQGGGRIVNISSVAG-LRPLPGQ 143
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 62.2 bits (152), Expect = 1e-11
Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFF 69
V D+ D+ ++ L + G LD +V+NAG+ D +R E LA
Sbjct: 54 VTVAACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVT 113
Query: 70 ALVTVCHILFPLLRPHARVVNVASKLGMLYN 100
+ + V +S G+L +
Sbjct: 114 GAWNLHELTRD--LDLGAFVLFSSVAGVLGS 142
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 1e-11
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 4/94 (4%)
Query: 10 NVRFHQLDILDQ-SSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP--GSFGQRAETTLAT 66
D+ D S+ L + + G +D+LVNNAGI AP + + +
Sbjct: 58 RAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDV 117
Query: 67 NFFALVTVCHILFPLLRPHARVVNVASKLGMLYN 100
N + PL++ R+VN++S G+
Sbjct: 118 NLLGAFLLTRAALPLMKK-QRIVNISSVAGLGGP 150
|
Length = 251 |
| >gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2 | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 2e-11
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD---TAPGSFGQRAETTLAT 66
N+ LD+ D S+ L + + +++ LD+L+NNAGI R P S +A+T + T
Sbjct: 51 NIHTIVLDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDT 110
Query: 67 NFFALVTVCHILFPLL--RPHARVVNVASKLGMLYNVPS 103
N + + P L +P A +VNV+S L VP
Sbjct: 111 NLIGPIRLIKAFLPHLKKQPEATIVNVSSGLA---FVPM 146
|
Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228 |
| >gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 7e-11
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 16/93 (17%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTL----- 64
N++ QLD+ DQ+SIH ++ G +DLLVNNAG A G F + E +
Sbjct: 55 NIKVQQLDVTDQNSIHNFQLVLKE-IGRIDLLVNNAG----YANGGFVE--EIPVEEYRK 107
Query: 65 --ATNFFALVTVCHILFPLLRPH--ARVVNVAS 93
TN F ++V + P +R +++N++S
Sbjct: 108 QFETNVFGAISVTQAVLPYMRKQKSGKIINISS 140
|
Length = 280 |
| >gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 1e-09
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE--TTLATNFFALV 72
QLD+ D +++ +L ++++ +HGGLD+L+NNAG Y P G TN FA+V
Sbjct: 50 QLDVNDGAALARLAEELEAEHGGLDVLINNAG-YGAMGPLLDGGVEAMRRQFETNVFAVV 108
Query: 73 TVCHILFPLL-RPHARVVNVASKLGML 98
V LFPLL R VVN+ S G+L
Sbjct: 109 GVTRALFPLLRRSRGLVVNIGSVSGVL 135
|
Length = 274 |
| >gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 1e-09
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 22/101 (21%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTL-------ATNFF 69
D+ D S + L + + GG+D++VNNAG+ + G F E +L A N
Sbjct: 57 DVRDYSQLTALAQACEEKWGGIDVIVNNAGV---ASGGFF---EELSLEDWDWQIAINLM 110
Query: 70 ALVTVCHILFPLLRP--HARVVNVASKLGML-------YNV 101
+V C PL + R+VN+AS G++ YNV
Sbjct: 111 GVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNV 151
|
Length = 270 |
| >gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 3e-09
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETT----LA 65
V LD+ D +S D ++ G +D+LVNNAG+ G F + L
Sbjct: 51 LVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMP---VGPFLDEPDAVTRRILD 107
Query: 66 TNFFALVTVCHILFPLLRPHAR--VVNVASKLGMLY 99
N + ++ + P + P R VVNVAS G +
Sbjct: 108 VNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIP 143
|
Length = 273 |
| >gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 4e-09
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 11/100 (11%)
Query: 10 NVRFHQLDILDQSSI-HKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQ----RAETTL 64
N LD+ D+++ L D G LD+L NNAGI R G F + +
Sbjct: 49 NAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRG---GPFEDIPLEAHDRVI 105
Query: 65 ATNFFALVTVCHILFPLLR--PHARVVNVASKLGMLYNVP 102
N ++ H P L+ P ARV+N +S +Y P
Sbjct: 106 DINVKGVLNGAHAALPYLKATPGARVINTSSASA-IYGQP 144
|
Length = 260 |
| >gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 6e-09
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLA----- 65
V +LD+ D +S+ D++ + G +D+LVNNAG+ G G E+++A
Sbjct: 47 VELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGV------GLAGAAEESSIAQAQAL 100
Query: 66 --TNFFALVTVCHILFPLLRP--HARVVNVASKLGML 98
TN F ++ + + P +R R++N++S LG L
Sbjct: 101 FDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL 137
|
Length = 270 |
| >gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 1e-08
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNF 68
D+ D+ +I + I+ G +D+LVNNAGI R F + N
Sbjct: 55 EATAFTCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNL 114
Query: 69 FALVTVCHILFPLLRP--HARVVNVAS 93
+ V + + H +++N+ S
Sbjct: 115 NGVFFVSQAVARHMIKQGHGKIINICS 141
|
Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 2e-08
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 15/92 (16%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-------QRAETT 63
V D+ D ++ +L D+++ + G +D+LVNNAG G+FG E
Sbjct: 58 VEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGF------GTFGPFLELSLDEEEEM 111
Query: 64 LATNFFALVTVCHILFPLL--RPHARVVNVAS 93
+ N AL + + P + R ++N+ S
Sbjct: 112 IQLNILALTRLTKAVLPGMVERGAGHIINIGS 143
|
Length = 265 |
| >gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 2e-08
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 16/93 (17%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA------ETTLATNFFA 70
D+ D + + ++ D + GGLD+LVNNAGI A + G E TLA N
Sbjct: 66 DVADPAQVERVFDTAVERFGGLDVLVNNAGI----AGPTGGIDEITPEQWEQTLAVNLNG 121
Query: 71 LVTVCHILFPLLR--PHARVV----NVASKLGM 97
PLL+ H V+ +VA +LG
Sbjct: 122 QFYFARAAVPLLKASGHGGVIIALSSVAGRLGY 154
|
Length = 264 |
| >gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 2e-08
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA--PGSFGQRAETTLATNF 68
VR +LD+ D + +I+ + G +D+LVNNAGI RD+ S + + + TN
Sbjct: 54 VRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWND-VINTNL 112
Query: 69 FALVTVCHILFPLLRPH--ARVVNVAS 93
++ V LF + R++N++S
Sbjct: 113 NSVFNVTQPLFAAMCEQGYGRIINISS 139
|
Length = 245 |
| >gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 5e-08
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAG--IYRDTAPGSFGQRAETTLATNFFALVTV 74
D+ D++ +L + + GGLD+LVN AG ++ + T TN +A+ +
Sbjct: 114 DLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWL 173
Query: 75 CHILFPLLRPHARVVNVAS 93
C P L P A ++N S
Sbjct: 174 CKAAIPHLPPGASIINTGS 192
|
Length = 300 |
| >gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 7e-08
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 32/129 (24%)
Query: 154 ETTLATNFFALVTVCHILFPLLR--PHARVVNVASKLGMLYNVPSQELRQTLFNESLTED 211
E A N+ + ++L P+L+ +R+VNV+S + D
Sbjct: 103 ELQFAVNYLGHFLLTNLLLPVLKASAPSRIVNVSSIAHRAGPID-------------FND 149
Query: 212 QLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPV 271
L+ +Y + + Y SKL A + F + L++ + VN +
Sbjct: 150 LDLENNKEY-----------SPYKA--YGQSKL--ANILFTRE--LARRLEGTGVTVNAL 192
Query: 272 HPGYVNTDL 280
HPG V T+L
Sbjct: 193 HPGVVRTEL 201
|
Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269 |
| >gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 2e-07
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD---TAPGSFGQRAE 61
K N + D+ D+ S +L + ++ ++ L++L+NNAGI R+ T AE
Sbjct: 46 KAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAE 105
Query: 62 TTLATNFFALVTVCHILFPLL--RPHARVVNVASKLGMLYNVP 102
+ATN A + + +L P L +P A ++NV+S L VP
Sbjct: 106 QEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLA---FVP 145
|
Length = 245 |
| >gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 2e-07
Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 9/109 (8%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA--- 60
N F Q D+ + + G +D+L+NNAGI + + G+
Sbjct: 44 AINPKVKATFVQCDVTSWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPW 103
Query: 61 ETTLATNFFALVTVCHILFPLLR-----PHARVVNVASKLGMLYNVPSQ 104
E T+ N ++ ++ + +VN+ S G LY P
Sbjct: 104 EKTIDVNLTGVINTTYLALHYMDKNKGGKGGVIVNIGSVAG-LYPAPQF 151
|
This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 2e-07
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 15/94 (15%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLA-------TN 67
LD+ D++SI D I + G +D+LVNNAG Y GS+G + + N
Sbjct: 52 SLDVTDEASIKAAVDTIIAEEGRIDVLVNNAG-Y-----GSYGAIEDVPIDEARRQFEVN 105
Query: 68 FFALVTVCHILFPLLRPHA--RVVNVASKLGMLY 99
F + ++ P +R R++N++S G +Y
Sbjct: 106 LFGAARLTQLVLPHMRAQRSGRIINISSMGGKIY 139
|
Length = 273 |
| >gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9 | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 2e-07
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 11/100 (11%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGG-LDLLVNNAGIYRDTAPGSFGQ----RAETTL 64
NV LD+ D+++ D GG LD L NNAG+ R G F + +
Sbjct: 48 NVVAGALDVTDRAAWAAALADFAAATGGRLDALFNNAGVGRG---GPFEDVPLAAHDRMV 104
Query: 65 ATNFFALVTVCHILFPLLR--PHARVVNVASKLGMLYNVP 102
N ++ + P L+ P ARV+N AS +Y P
Sbjct: 105 DINVKGVLNGAYAALPYLKATPGARVINTASSSA-IYGQP 143
|
This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 50.5 bits (122), Expect = 2e-07
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 17/94 (18%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA-----PGSFGQRAETTL 64
R D+ D++++ L + G LD+LVNNAGI RD + + +
Sbjct: 55 EARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDW----DRVI 110
Query: 65 ATN---FFALVTVCHILFPLLRPH--ARVVNVAS 93
N F V P + R+VN++S
Sbjct: 111 DVNLTGTFN---VVRAALPPMIKARYGRIVNISS 141
|
Length = 246 |
| >gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 2e-07
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA---- 60
+ LD+ D++++ + + + G +D+LVNNAG+ A G A
Sbjct: 49 EIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGL----ALGDPLDEADLDD 104
Query: 61 -ETTLATNFFALVTVCHILFPLL--RPHARVVNVAS 93
+ + TN L+ + P + R ++N+ S
Sbjct: 105 WDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGS 140
|
Length = 246 |
| >gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 3e-07
Identities = 31/93 (33%), Positives = 36/93 (38%), Gaps = 17/93 (18%)
Query: 15 QLDILDQSSIHKLHDDI--QTQHGGLDLLVNNAGIYRDTAPGSFGQRAE-TTLAT----- 66
QLD+ I + + GL LVNNAGI FG E +
Sbjct: 54 QLDVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGI------LGFGGDEELLPMDDYRKCM 107
Query: 67 --NFFALVTVCHILFPLLR-PHARVVNVASKLG 96
N F V V PLLR RVVNV+S G
Sbjct: 108 EVNLFGTVEVTKAFLPLLRRAKGRVVNVSSMGG 140
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281 |
| >gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 6e-07
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA-----PGSFGQRAET 62
N + D+ D+ ++ L + ++ + G +D+LVNNAGI RD + +
Sbjct: 48 GGNAAALEADVSDREAVEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEEDW----DA 103
Query: 63 TLATNFFALVTVCHILFPLL--RPHARVVNVASKLGMLYNV 101
+ N + V + + R R++N++S +G++ N
Sbjct: 104 VINVNLTGVFNVTQAVIRAMIKRRSGRIINISSVVGLIGNP 144
|
This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240 |
| >gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 7e-07
Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 19/99 (19%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI-------YRDTAPGSFGQRAET 62
V F D+ D S+ + D Q G +D LVNNAG+ D P SF +
Sbjct: 53 EVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESF----DR 108
Query: 63 TLATN-----FFALVTVCHILF---PLLRPHARVVNVAS 93
LA N F +L P PH +V V+S
Sbjct: 109 VLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSS 147
|
Length = 256 |
| >gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 7e-07
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 11/95 (11%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR-----DTAPGSFGQRAETTLA 65
D+ D +S+ + D GGLD LVNNAGI + ++ +
Sbjct: 58 AHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDA----VMN 113
Query: 66 TNFFALVTVCHILFPLLR--PHARVVNVASKLGML 98
N + P LR R+VN+AS +
Sbjct: 114 VNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALW 148
|
Length = 250 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 8e-07
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 14 HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAG--IYRDTAPGSFGQRA---ETTLATNF 68
+ D+ D +++ DI +HG +D LVNNAG I R S R E T+A N+
Sbjct: 425 YTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVE-NSTD-RFHDYERTMAVNY 482
Query: 69 FALVTVCHILFPLLRPHAR----VVNVASKLGMLYNVP 102
F V + L P +R R VVNV+S +G+ N P
Sbjct: 483 FGAVRLILGLLPHMR--ERRFGHVVNVSS-IGVQTNAP 517
|
Length = 657 |
| >gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 1e-06
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 8/98 (8%)
Query: 5 KNNNNNVRFHQLDILD--QSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-- 60
+++ + +LD+ D S + + + LD+L+NNAGI P S
Sbjct: 43 GASHSRLHILELDVTDEIAESAEAVAERLGDAG--LDVLINNAGILHSYGPASEVDSEDL 100
Query: 61 ETTLATNFFALVTVCHILFPLLRP--HARVVNVASKLG 96
N + + PLL A+++N++S++G
Sbjct: 101 LEVFQVNVLGPLLLTQAFLPLLLKGARAKIINISSRVG 138
|
Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233 |
| >gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
Query: 16 LDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLA-------TNF 68
LD+ D +I + D + G +D+LVNNAG G G E+ LA N
Sbjct: 57 LDVTDFDAIDAVVADAEATFGPIDVLVNNAGY------GHEGAIEESPLAEMRRQFEVNV 110
Query: 69 FALVTVCHILFPLLRP--HARVVNVASKLGM 97
F V + + P +R +VN+ S G+
Sbjct: 111 FGAVAMTKAVLPGMRARRRGHIVNITSMGGL 141
|
Length = 277 |
| >gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 2e-06
Identities = 28/96 (29%), Positives = 33/96 (34%), Gaps = 13/96 (13%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI-------YRDTAPGSFGQRAET 62
+ Q DI + S L D G LD LVNNAGI D SF +
Sbjct: 52 RAIYFQADIGELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAI 111
Query: 63 TLATNFF-----ALVTVCHILFPLLRPHARVVNVAS 93
L FF A V PH ++ V S
Sbjct: 112 NLRGPFFLTQAVARRMVEQP-DRFDGPHRSIIFVTS 146
|
This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255 |
| >gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 2e-06
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Query: 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAG--IYRDTAPGSFGQRAETTL 64
+ FH D+ D + L D I +HG LD+LVNNAG Y A S + E +
Sbjct: 45 DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEAS-PRFHEKIV 103
Query: 65 ATNFFALVTVCHILFPLLRPHAR---VVNVAS 93
N A + V +++ +VN+ S
Sbjct: 104 ELNLLAPLLVAQAANAVMQQQPGGGSIVNIGS 135
|
Length = 252 |
| >gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 2e-06
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFFALVT 73
Q+D+ D++++ G LD+LV NAGI+ T E + N
Sbjct: 61 QVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFL 120
Query: 74 VCHILFPLLRPHA--RVVNVAS 93
+ P L R+V +S
Sbjct: 121 LTQAALPALIRAGGGRIVLTSS 142
|
Length = 251 |
| >gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 3e-06
Identities = 21/103 (20%), Positives = 42/103 (40%), Gaps = 11/103 (10%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-----Q 58
+ V +++ D+ + +++ I+ + G + +L+NNAG+ G +
Sbjct: 43 VRKAGGKVHYYKCDVSKREEVYEAAKKIKKEVGDVTILINNAGV----VSGKKLLELPDE 98
Query: 59 RAETTLATNFFALVTVCHILFPLL--RPHARVVNVASKLGMLY 99
E T N A P + R H +V +AS G++
Sbjct: 99 EIEKTFEVNTLAHFWTTKAFLPDMLERNHGHIVTIASVAGLIS 141
|
17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 3e-06
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 13 FHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALV 72
F Q D+ D +SI + G +D L N AG+ PG+ E NF L
Sbjct: 27 FIQADLGDPASIDAA---VAALPGRIDALFNIAGV-----PGTAP--VELVARVNFLGLR 76
Query: 73 TVCHILFPLLRPHARVVNVASKLGMLY 99
+ L P + P +VNVAS G +
Sbjct: 77 HLTEALLPRMAPGGAIVNVASLAGAEW 103
|
Length = 241 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 4e-06
Identities = 26/150 (17%), Positives = 45/150 (30%), Gaps = 45/150 (30%)
Query: 154 ETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQL 213
+ + N + PL++ R+VN++S G+
Sbjct: 112 DRVIDVNLLGAFLLTRAALPLMKK-QRIVNISSVAGLG---------------------- 148
Query: 214 LDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHP 273
+ +Y+ SK + L+ L+ + I VN V P
Sbjct: 149 ------------------GPPGQAAYAASKAALIGLT----KALALELAPRGIRVNAVAP 186
Query: 274 GYVNTDLTEHKGVLTPEQGKIRQKIYLLKR 303
GY++T +T E K L R
Sbjct: 187 GYIDTPMTAALESAELEALKRLAARIPLGR 216
|
Length = 251 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 4e-06
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF----GQRAE 61
+ V + D+ D + + + G DL+VN AGI PG F + E
Sbjct: 51 ASGQKVSYISADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISI---PGLFEDLTAEEFE 107
Query: 62 TTLATNFFALVTVCHILFPLL--RPHARVVNVASKLGML 98
+ N+F + V H + PL+ + +V V+S+ ++
Sbjct: 108 RGMDVNYFGSLNVAHAVLPLMKEQRPGHIVFVSSQAALV 146
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 4e-06
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 5/92 (5%)
Query: 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE--TTL 64
V + D+ D + + +L + I+ G DLL+NNAG + F E
Sbjct: 47 PGLRVTTVKADLSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYF 106
Query: 65 ATNFFA-LVTVCHIL--FPLLRPHARVVNVAS 93
N + + +L F VVNV+S
Sbjct: 107 DLNLTSPVCLTSTLLRAFKKRGLKKTVVNVSS 138
|
Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241 |
| >gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 6e-06
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 16/96 (16%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG---QRAETT--- 63
R+ D+ ++ + + + GG+++L+NNAG+ F +
Sbjct: 54 RHRWVVADLTSEAGREAVLARAR-EMGGINVLINNAGVNH------FALLEDQDPEAIER 106
Query: 64 -LATNFFALVTVCHILFPLLR--PHARVVNVASKLG 96
LA N A + + L PLLR P A VVNV S G
Sbjct: 107 LLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFG 142
|
Length = 263 |
| >gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 47.1 bits (113), Expect = 6e-06
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD------TAPGSFGQRAETTLATNF 68
LDI + ++ + + +HGGLD++V+NAGI RD R ++ LA N
Sbjct: 262 ALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDE-----ARWDSVLAVNL 316
Query: 69 FALVTVCHILFP--LLRPHARVVNVAS 93
A + + L L R+V V+S
Sbjct: 317 LAPLRITEALLAAGALGDGGRIVGVSS 343
|
Length = 450 |
| >gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 6e-06
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGI-YRDTAPGSFGQRAETTLATNFFALVTVC 75
D+ D + D ++ GL +LVNNAG R A TN F+ +
Sbjct: 68 DVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELS 127
Query: 76 HILFPLLRPHA--RVVNVASKLGM 97
PLL+ HA +VN+ S G+
Sbjct: 128 RYAHPLLKQHASSAIVNIGSVSGL 151
|
Length = 257 |
| >gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 46.0 bits (110), Expect = 6e-06
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG--QRAETTLATNFFALV 72
QLD+ D +S+ + + +LVNNAGI+R + G + TN+F +
Sbjct: 55 QLDVTDPASVAAAAE----AASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPL 110
Query: 73 TVCHILFPLL--RPHARVVNVASKLGMLYNVPS 103
+ P+L +VNV S L N P+
Sbjct: 111 AMARAFAPVLAANGGGAIVNVLSVLS-WVNFPN 142
|
Length = 238 |
| >gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5 | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 6 NNNNNVRFH--QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG--QRAE 61
V+ QLD+ D+ SI +++ + +D+LVNNAG+ P + E
Sbjct: 45 GAKFPVKVLPLQLDVSDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWE 104
Query: 62 TTLATNFFALVTVCHILFPLL--RPHARVVNVAS 93
T + TN L+ V ++ P++ R ++N+ S
Sbjct: 105 TMIDTNVKGLLNVTRLILPIMIARNQGHIINLGS 138
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 1e-05
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 15 QLDILDQSSIHKLHDDI-QTQHGGLDLLVNNAG--IYR---DTAPGSFGQRAETTLATNF 68
D+ +S +L D + G L++LVNNAG I + D + ++TNF
Sbjct: 61 VCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSL----IMSTNF 116
Query: 69 FALVTVCHILFPLLRPHAR--VVNVASKLGMLYNVPS 103
A + + PLL+ +V ++S G++ VPS
Sbjct: 117 EAAYHLSRLAHPLLKASGNGNIVFISSVAGVI-AVPS 152
|
This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 1e-05
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD 50
+ Q D+ D++++ + G +D+LVNNAGI+ D
Sbjct: 57 RAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFED 97
|
Length = 249 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 1e-05
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
Q D+ D S+ + D+ + + GG+D+LVNNAGI RD
Sbjct: 61 QGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDN 97
|
Length = 248 |
| >gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 1e-05
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA-PGSFGQRAETTLATNFF 69
D+ D ++ D + G LD+LVNNAGI D A + + + N
Sbjct: 61 ALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLD 120
Query: 70 ALVTVCH-ILFPLLRPH--ARVVNVAS 93
V L P++R R+VN+AS
Sbjct: 121 GFFNVTQAALPPMIRARRGGRIVNIAS 147
|
Length = 249 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR-------DTAPGSFGQRAETTLATN 67
+D+ D++ I + + + + G +D+LVNNAG+ DT F R + T
Sbjct: 57 AMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEF-ARLQAINLTG 115
Query: 68 FFALVTVCHILFPLLRPHARVVNVASKLGMLYN 100
+ + L A +VNVAS G++
Sbjct: 116 AYLVAREALRLMIEQGHGAAIVNVASGAGLVAL 148
|
Length = 520 |
| >gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 16 LDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
D+ D+ + + ++I+ + G +D+LVNNAGI RD
Sbjct: 55 CDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDN 90
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 3e-05
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 15/90 (16%)
Query: 16 LDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLAT-------NF 68
+D++D + + D++ Q G LD LVN AG + +G A+ T N
Sbjct: 61 IDLVDPQAARRAVDEVNRQFGRLDALVNIAGAF------VWGTIADGDADTWDRMYGVNV 114
Query: 69 FALVTVCHILFPLL--RPHARVVNVASKLG 96
+ P L R+VN+ +
Sbjct: 115 KTTLNASKAALPALTASGGGRIVNIGAGAA 144
|
Length = 239 |
| >gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 5e-05
Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 47/144 (32%)
Query: 154 ETTLATNFFALVTVCHILFPLLRP--HARVVNVASKLGMLYNVPSQELRQTLFNESLTED 211
N + + PLL A+++N++S++G S+ ++
Sbjct: 101 LEVFQVNVLGPLLLTQAFLPLLLKGARAKIINISSRVG-----------------SIGDN 143
Query: 212 QLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPV 271
GW +SY SK + L+ +L+ + +R I V +
Sbjct: 144 TS------------------GGW--YSYRASKAALNMLT----KSLAVELKRDGITVVSL 179
Query: 272 HPGYVNTDLTE----HKGVLTPEQ 291
HPG+V TD+ +KG +TPE+
Sbjct: 180 HPGWVRTDMGGPFAKNKGPITPEE 203
|
Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233 |
| >gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 5e-05
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 19/112 (16%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFFALVT 73
Q D+ D +++ +L D +T G +D+LVNNAG+ F + T+ATN
Sbjct: 61 QADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFV 120
Query: 74 VCHILFPLLRPHARVVNV----------------ASKLGM--LYNVPSQELR 107
V L R++N+ ASK + L +V + ELR
Sbjct: 121 VLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELR 172
|
Length = 245 |
| >gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 5e-05
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 17/98 (17%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI----YRDTAPGSFGQRA 60
+V +LD+ +S+ D ++ + +DLL+NNAG+ + TA G F
Sbjct: 63 ATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADG-F---- 117
Query: 61 ETTLATNF---FALVTVCHILFPLLR--PHARVVNVAS 93
E TN FAL +L L P +RVV V+S
Sbjct: 118 ELQFGTNHLGHFALTG---LLLDRLLPVPGSRVVTVSS 152
|
Length = 306 |
| >gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 6e-05
Identities = 27/101 (26%), Positives = 36/101 (35%), Gaps = 10/101 (9%)
Query: 13 FHQLDILDQSSIHKLHDDI-QTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFAL 71
D+ D+ G LD LVN AG+ G+ A L N+F L
Sbjct: 35 DVIADLSTPEGRAAAIADVLARCSGVLDGLVNCAGV-----GGTTV--AGLVLKVNYFGL 87
Query: 72 VTVCHILFPLLRPHA--RVVNVASKLGMLYNVPSQELRQTL 110
+ L P LR V V+S G + EL + L
Sbjct: 88 RALMEALLPRLRKGHGPAAVVVSSIAGAGWAQDKLELAKAL 128
|
Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 6e-05
Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Query: 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR-DTAPGSFGQRAETTLA 65
N + D+ D S+ + + G +D+LVN+AG+ A + + T+
Sbjct: 59 LGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTID 118
Query: 66 TNFFALVTVCHILFP--LLRPHARVVNVASKLG 96
N + + + ++VN+AS+ G
Sbjct: 119 INLKGSFLMAQAVGRHMIAAGGGKIVNLASQAG 151
|
Length = 255 |
| >gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 6e-05
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 16 LDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE--TTLATNFFALVT 73
DI D+ ++ I +HG LD+LVNN G RD P + A L T+ A +
Sbjct: 67 FDIADEEAVAAAFARIDAEHGRLDILVNNVG-ARDRRPLAELDDAAIRALLETDLVAPIL 125
Query: 74 VCHILFPLLRPHA--RVVNVASKLGML 98
+ + ++ R++ + S G +
Sbjct: 126 LSRLAAQRMKRQGYGRIIAITSIAGQV 152
|
Length = 256 |
| >gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7 | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 8e-05
Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 21/107 (19%)
Query: 7 NNNNVRFHQLDILDQSSI----HKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAET 62
+ V +LD+ D SI + D +D+++NNAG+ + A
Sbjct: 48 YGDKVVPLRLDVTDPESIKAAAAQAKD--------VDVVINNAGVL--KPATLLEEGALE 97
Query: 63 TLA----TNFFALVTVCHILFPLLRPHAR--VVNVASKLGMLYNVPS 103
L N F L+ + P+L+ + +VN+ S L N P+
Sbjct: 98 ALKQEMDVNVFGLLRLAQAFAPVLKANGGGAIVNLNSVAS-LKNFPA 143
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235 |
| >gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 9e-05
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 16 LDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI-YRDTAPGSFGQRAETTLATNFFALVTV 74
LD+ D ++ ++ GGLD+L+NNAGI R + + N+F V +
Sbjct: 60 LDMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVAL 119
Query: 75 CHILFPLL--RPHARVVNVASKLG 96
P L R +V V+S G
Sbjct: 120 TKAALPHLIERSQGSIVVVSSIAG 143
|
Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 26/95 (27%)
Query: 14 HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI-----YRDTAPGSFGQRAETTLATNF 68
+++D+ D ++ + ++ +HG D++VNNAGI + DT+ + + L N
Sbjct: 369 YRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDW----DRVLDVNL 424
Query: 69 FALVTVCHILFPLLRPHAR----------VVNVAS 93
+ ++ C R R +VNVAS
Sbjct: 425 WGVIHGC-------RLFGRQMVERGTGGHIVNVAS 452
|
Length = 582 |
| >gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP 53
LD+ Q SI ++ + GG+D+L NNA ++ D AP
Sbjct: 58 SLDVTRQDSIDRIVAAAVERFGGIDILFNNAALF-DMAP 95
|
Length = 257 |
| >gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIY-----RDTAPGSFGQRAETTLATNFF 69
Q D+ D S + +L D + GG+D+LVNNAG+ +T+ F + FF
Sbjct: 59 QADVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFF 118
Query: 70 ALVTV-CHILFPLLRPHARVVNVASKLGMLY 99
L LR R++N++S L Y
Sbjct: 119 VLQEAAKR-----LRDGGRIINISSSLTAAY 144
|
1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETT-------LATNFF 69
D+LD++ + ++ + GG+D+LVNNAG G A+TT L +F
Sbjct: 67 DVLDEADVAAFAAAVEARFGGVDMLVNNAG------QGRVSTFADTTDDAWRDELELKYF 120
Query: 70 ALVTVCHILFPLLR--PHARVVNVASKL 95
+++ PLLR A +V V S L
Sbjct: 121 SVINPTRAFLPLLRASAAASIVCVNSLL 148
|
Length = 265 |
| >gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAG--IYRDTAPGSFGQR---AETTLATNFFAL 71
D+ D ++ L D++ + GG+D+L+NNAG I R A R E T+ N++A
Sbjct: 97 DLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESL--DRWHDVERTMVLNYYAP 154
Query: 72 VTVCHILFP--LLRPHARVVNVAS 93
+ + L P L R ++NVA+
Sbjct: 155 LRLIRGLAPGMLERGDGHIINVAT 178
|
Length = 293 |
| >gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 2e-04
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 16 LDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA----ETTLATNFFAL 71
LD+ D +++ ++ + +HG +D LVN AG+ R PG+ + E T A N +
Sbjct: 47 LDVADAAAVREVCSRLLAEHGPIDALVNCAGVLR---PGATDPLSTEDWEQTFAVNVTGV 103
Query: 72 VTVCHILFPLL--RPHARVVNVAS 93
+ + P + R +V VAS
Sbjct: 104 FNLLQAVAPHMKDRRTGAIVTVAS 127
|
2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFF 69
R + D+ S ++ + G +D+LVNNAGI RD + TN
Sbjct: 52 FRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLN 111
Query: 70 ALVTVCHILFP--LLRPHARVVNVAS 93
++ V + R R++N++S
Sbjct: 112 SVFNVTQPVIDGMRERGWGRIINISS 137
|
This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 3e-04
Identities = 25/154 (16%), Positives = 43/154 (27%), Gaps = 50/154 (32%)
Query: 154 ETTLATNFFALVTVCHILFPLL--RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTED 211
+ L N + + P + + R+VN++S G
Sbjct: 99 DRVLDVNLTGVFLLTRAALPHMKKQGGGRIVNISSVAG---------------------- 136
Query: 212 QLLDMMTDYVQLAKEGKDKEAGWPEFS-YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNP 270
P + Y+ SK + + +L+ + I VN
Sbjct: 137 -------------------LRPLPGQAAYAASKAAL--EGLTR--SLALELAPYGIRVNA 173
Query: 271 VHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRT 304
V PG V+T + + E K L R
Sbjct: 174 VAPGLVDTPMLAK--LGPEEAEKELAAAIPLGRL 205
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 3e-04
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-----ETT 63
+N+ QLD+ ++++I ++ + + +D+LVNNAG+ P +A ET
Sbjct: 46 DNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEP---AHKASVEDWETM 102
Query: 64 LATNFFALVTVCHILFPLL--RPHARVVNVASKLG 96
+ TN LV + + P + R H ++N+ S G
Sbjct: 103 IDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAG 137
|
Length = 248 |
| >gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 3e-04
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF-GQRAETTLATNFF 69
V +H D+ ++I + Q Q GG+D+LVNNAGI F ++ + +A N
Sbjct: 55 VLYHGADLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLS 114
Query: 70 ALVTVCHILFPLLRPH--ARVVNVASKLGM 97
A+ + P ++ R++N+AS G+
Sbjct: 115 AVFHTTRLALPHMKKQGWGRIINIASVHGL 144
|
DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 3e-04
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLAT-------N 67
Q D+ ++ + + + GGLD++V+NAGI + AET+L N
Sbjct: 55 QCDVTSEAQVQSAFEQAVLEFGGLDIVVSNAGIA------TSSPIAETSLEDWNRSMDIN 108
Query: 68 FFALVTVCHILFPLLRPH---ARVVNVASK 94
V F +++ +V ASK
Sbjct: 109 LTGHFLVSREAFRIMKSQGIGGNIVFNASK 138
|
This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 3e-04
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPG 54
K+N + + +DI D+ + +I+ Q G +D+L NNAG+ D A G
Sbjct: 50 KSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGV--DNAAG 97
|
Length = 272 |
| >gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIY----RDTAPGSFGQRAETTLA 65
+ LD+ +S+ L + ++ + + LL+NNAG+ R T F E
Sbjct: 66 KLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGF----ELQFG 121
Query: 66 TN---FFALVTVCHILFPLLRP-HARVVNVAS 93
TN FAL H+L PLLR ARV + +S
Sbjct: 122 TNHLGHFALTA--HLL-PLLRAGRARVTSQSS 150
|
Length = 313 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 4e-04
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA--ETTLATN 67
+V D D L D ++ + G +D+LV+NAGI R T G A E + N
Sbjct: 46 DVEAVPYDARDPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLRE-GSDAELEAHFSIN 104
Query: 68 FFALVTVCHILFPLLR--PHARVVNVAS 93
A + L P LR RVV + S
Sbjct: 105 VIAPAELTRALLPALREAGSGRVVFLNS 132
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 4e-04
Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 6/116 (5%)
Query: 2 KVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFGQRA 60
++ K + ++ D+ Q S+ K IQ G +D+L+ NAGI A ++
Sbjct: 51 ELAKKYGVKTKAYKCDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQW 110
Query: 61 ETTLATNFFALVTVCHILFPLL--RPHARVVNVASKLGMLYNVPSQELRQTLFNES 114
+ N + + + ++ AS G + N P Q +N S
Sbjct: 111 NKVIDVNLNGVFNCAQAAAKIFKKQGKGSLIITASMSGTIVNRPQP---QAAYNAS 163
|
NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252 |
| >gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 4e-04
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD 50
C VR + ++ D+ + I G L+ L+NNAGI RD
Sbjct: 46 VAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRD 95
|
Length = 253 |
| >gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 5e-04
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNF 68
+V + D+ + I + + GGLD+LVNNAGI F + + +A
Sbjct: 51 SVIYLPADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVML 110
Query: 69 FALVTVCHILFPLLRP--HARVVNVAS 93
+ P ++ R++N+AS
Sbjct: 111 TSAFHTIRAALPHMKKQGWGRIINIAS 137
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255 |
| >gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 6e-04
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTL-ATN 67
+ Q D+LD ++ +L G LD LVNNA + T GS + L A+N
Sbjct: 57 GSAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASN 116
Query: 68 FFALVTVCHILFPLLRP-HARVVNVA 92
A + P LR +VN+
Sbjct: 117 LKAPFFLSQAAAPQLRKQRGAIVNIT 142
|
Length = 249 |
| >gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 6e-04
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 9/84 (10%)
Query: 16 LDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR----DTAPGSFGQRAETTLATNFFAL 71
LD+ D+ + + G LD+LVNNAGI + A + R + TN L
Sbjct: 59 LDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRM---IDTNLLGL 115
Query: 72 VTVCHILFPLLRPH--ARVVNVAS 93
+ H P +VN++S
Sbjct: 116 MYTTHAALPHHLLRNKGTIVNISS 139
|
CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 6e-04
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Query: 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNF 68
RF LD+ D+ + D + G LD+LVNNAGI G ETT +
Sbjct: 54 RFFHLDVTDEDGWTAVVDTAREAFGRLDVLVNNAGI-------LTGGTVETTTLEEW 103
|
This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247 |
| >gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 6e-04
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE--TTLATNF 68
RF DI D ++I + + + G +D+LVN A Y D G RA+ L N
Sbjct: 54 ARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLD--DGLASSRADWLAALDVNL 111
Query: 69 FALVTVCHILFP-LLRPHARVVNVAS 93
+ + P L R +VN S
Sbjct: 112 VSAAMLAQAAHPHLARGGGAIVNFTS 137
|
Length = 261 |
| >gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 7e-04
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR 49
+ + D+ D+ + + I+ + G +D+LVNNAGI +
Sbjct: 55 RELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIK 99
|
Length = 265 |
| >gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.001
Identities = 34/151 (22%), Positives = 48/151 (31%), Gaps = 59/151 (39%)
Query: 156 TLATNFFALVTVCHILFPLLR--PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQL 213
+ N ++ H P L+ P ARV+N +S +Y P
Sbjct: 104 VIDINVKGVLNGAHAALPYLKATPGARVINTSSASA-IYGQP------------------ 144
Query: 214 LDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHP 273
LA YS +K V L+ L + RR I V V P
Sbjct: 145 --------GLA-------------VYSATKFAVRGLT----EALDLEWRRHGIRVADVMP 179
Query: 274 GYVNTDLTEHK------------GV-LTPEQ 291
+V+T + + GV LTPE
Sbjct: 180 LFVDTAMLDGTSNEVDAGSTKRLGVRLTPED 210
|
Length = 260 |
| >gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.001
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAG--IYRD---TAPGSFGQRAETTLATNFFAL 71
DI D+ S+ + G +D+LVNNAG + T P + E +A N
Sbjct: 60 DITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLW----ERLIAINLTGA 115
Query: 72 VTVCHILFPLL--RPHARVVNVASKLG 96
+ + H + P + R R+VN+AS
Sbjct: 116 LHMHHAVLPGMVERGAGRIVNIASDAA 142
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250 |
| >gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.001
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFFA 70
F Q+D+ D + + + G +D LVNNAG+ D G+ A +L N
Sbjct: 58 EFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGV-NDGVGLEAGREAFVASLERNLIH 116
Query: 71 LVTVCHILFPLLR-PHARVVNVASK 94
+ H P L+ +VN++SK
Sbjct: 117 YYVMAHYCLPHLKASRGAIVNISSK 141
|
Length = 258 |
| >gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.001
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIY----RDTAPGSFGQRAETTL 64
+ V LD+ D S+ + +D+L+NNAG+ G E
Sbjct: 71 DGVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDG-----WEAQF 125
Query: 65 ATNFFALVTVCHILFPLLRP--HARVVNVAS 93
ATN + ++L+P L ARVV ++S
Sbjct: 126 ATNHLGHFALVNLLWPALAAGAGARVVALSS 156
|
Length = 315 |
| >gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 0.001
Identities = 17/87 (19%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTV 74
D+ D++++ ++ GG+D++V+NAGI G + ++ +F T
Sbjct: 476 ACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIA---ISGPIEETSDEDWRRSFDVNATG 532
Query: 75 CHIL----FPLLRPHA---RVVNVASK 94
++ +++ +V +ASK
Sbjct: 533 HFLVAREAVRIMKAQGLGGSIVFIASK 559
|
Length = 681 |
| >gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.001
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 15/88 (17%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTL-------ATN 67
D+ D++ L GGL +LVNNAG+ GSFG + L A N
Sbjct: 57 VQDVTDEAQWQALLAQAADAMGGLSVLVNNAGV------GSFGAIEQIELDEWRRVMAIN 110
Query: 68 FFALVTVCHILFPLLRPH--ARVVNVAS 93
++ C P LR A +VN++S
Sbjct: 111 VESIFLGCKHALPYLRASQPASIVNISS 138
|
Length = 251 |
| >gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.001
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI 47
N D+ D+ + L D + G D++VNNAGI
Sbjct: 53 NAVAVGADVTDKDDVEALIDQAVEKFGSFDVMVNNAGI 90
|
2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.002
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 238 SYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283
+Y+ SK V L+ +L+ + + I VN + PGY++TDLT+
Sbjct: 159 AYNASKAAVIHLA----KSLAVEWAKYFIRVNSISPGYIDTDLTDF 200
|
NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252 |
| >gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.002
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 9/100 (9%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA--- 60
++ D+ D + +L + + GG+D+LVNNAGI T F +
Sbjct: 45 LADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGI---TMWSRFDELTDLS 101
Query: 61 --ETTLATNFFALVTVCHILFP-LLRPHARVVNVASKLGM 97
E + N+ V H P L ++V V+S G+
Sbjct: 102 VFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGL 141
|
Length = 263 |
| >gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.002
Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 10/90 (11%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA--ETTLATNF 68
V + D+ D ++ D HG D+++ NAGI T A + TN+
Sbjct: 52 VSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNY 111
Query: 69 FALVTVCHILFPLL-----RPHARVVNVAS 93
F +V P + +V +AS
Sbjct: 112 FGMVATFQ---PFIAPMRAARRGTLVGIAS 138
|
Length = 257 |
| >gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.002
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 5/93 (5%)
Query: 6 NNNNNVRF--HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ET 62
+ F LD+ D +++ ++ + + G LD+LVN AGI R A S +
Sbjct: 43 LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQ 102
Query: 63 TLATNFFALVTVCHILFPLLRPHAR--VVNVAS 93
T A N + + P R +V V S
Sbjct: 103 TFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGS 135
|
Length = 252 |
| >gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 0.002
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTL 64
K + + D+ + + L + I + G +D+LVNNAGI +FG + T
Sbjct: 51 KEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGI------SNFGLVTDMTD 104
|
Length = 247 |
| >gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.002
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 15/86 (17%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLA-------TNFF 69
D+ D I +L + G +D+LVNNAG PG F AE T
Sbjct: 58 DLTDPEDIDRLVEKAGDAFGRVDILVNNAG---GPPPGPF---AELTDEDWLEAFDLKLL 111
Query: 70 ALVTVCHILFPLL--RPHARVVNVAS 93
+++ + + P + R R+VN++S
Sbjct: 112 SVIRIVRAVLPGMKERGWGRIVNISS 137
|
This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.002
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR 49
Q D+ ++ I + I+TQH G+D+ +NNAG+ R
Sbjct: 62 QCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLAR 96
|
Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.003
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 10/90 (11%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE---TTLATNF--- 68
Q DI D++++ IQ + G LD+LVNNAGI P S Q AE N
Sbjct: 321 QADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKP-SLEQSAEDFTRVYDVNLSGA 379
Query: 69 FALVTVCHILFPLLRPHARVVNVASKLGML 98
FA L+ +VN+ S +L
Sbjct: 380 FACARAAAR---LMSQGGVIVNLGSIASLL 406
|
Length = 520 |
| >gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.003
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIY--RDTAPGSFGQRAETTLATN 67
+ +D+ D S+ + DD + LD LV NA +Y P Q E ++ATN
Sbjct: 56 SYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATN 115
Query: 68 FFALVTVCHILFPLL----RPHARVV 89
+C++L L P R+V
Sbjct: 116 HLGHFLLCNLLLEDLKKSPAPDPRLV 141
|
Length = 322 |
| >gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.003
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 25/83 (30%)
Query: 36 GGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHIL--FPLLR---------- 83
GGLD+LVNNAGI RD +E + A++ V H+ F LR
Sbjct: 91 GGLDVLVNNAGILRD---RMIANMSE----EEWDAVIAV-HLKGHFATLRHAAAYWRAES 142
Query: 84 -----PHARVVNVASKLGMLYNV 101
AR++N +S G+ +V
Sbjct: 143 KAGRAVDARIINTSSGAGLQGSV 165
|
Length = 286 |
| >gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1 | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.003
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 21 QSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPG--SFG-QRAETTLATNFFALVTVCHI 77
+ + ++ + G LD+LVNNA Y+ ++ E T TN F++ +
Sbjct: 93 RDLVKEVVK----EFGKLDILVNNAA-YQHPQESIEDITTEQLEKTFRTNIFSMFYLTKA 147
Query: 78 LFPLLRPHARVVNVAS 93
P L+ + ++N S
Sbjct: 148 ALPHLKKGSSIINTTS 163
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270 |
| >gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.003
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 16/94 (17%)
Query: 15 QLDILDQSSIHKLHDD-IQTQHGGLDLLVNNAGIYRDTAPGSFG-------QRAETTLAT 66
LD+ D S+ + D+ I L L NNAG G +G Q+ E +T
Sbjct: 51 LLDLDDPESVERAADEVIALTDNRLYGLFNNAGF------GVYGPLSTISRQQMEQQFST 104
Query: 67 NFFALVTVCHILFPLLRPH--ARVVNVASKLGML 98
NFF + +L P + PH R+V +S +G++
Sbjct: 105 NFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI 138
|
Length = 256 |
| >gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.003
Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 8/68 (11%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTV 74
Q D+ D ++ L G D+LVNNA + T G + L +
Sbjct: 56 QADLSDFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQG-------SEDAWAELFGI 108
Query: 75 CHILFPLL 82
++ P L
Sbjct: 109 -NLKAPYL 115
|
Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234 |
| >gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Score = 38.0 bits (88), Expect = 0.004
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA----ETTLAT 66
V+ ++ D+ + L + G+D+LVNNAGI +D G F + + ++ L
Sbjct: 54 VKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKD---GLFVRMSDEDWDSVLEV 110
Query: 67 NFFALVTVCHIL-FPLL-RPHARVVNVASKLGMLYNVPSQ 104
N A + L P++ R + R++N+ S +G+ N P Q
Sbjct: 111 NLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN-PGQ 149
|
Length = 245 |
| >gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Score = 37.6 bits (87), Expect = 0.004
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA-PGSFGQRAETTLA 65
N R Q D+ D+ + L + +HG +V NAGI RD A P + + +
Sbjct: 46 QGGNARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIH 105
Query: 66 TNFFALVTVCH-ILFPL--LRPHARVVNVASKLGMLYN 100
TN V H P+ R R++ +AS G++ N
Sbjct: 106 TNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGN 143
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 0.004
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 14/98 (14%)
Query: 10 NVRFHQLDILDQSSIHK-LHDDIQTQHGGLD--LLVNNAGIYRDTAPGSF----GQRAET 62
+ D I++ + +++ GLD +LVNN GI P F +
Sbjct: 52 ETKTIAADFSAGDDIYERIEKELE----GLDIGILVNNVGISHSI-PEYFLETPEDELQD 106
Query: 63 TLATNFFALVTVCHILFP--LLRPHARVVNVASKLGML 98
+ N A + + ++ P + R +VN++S G++
Sbjct: 107 IINVNVMATLKMTRLILPGMVKRKKGAIVNISSFAGLI 144
|
This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 37.9 bits (89), Expect = 0.004
Identities = 21/94 (22%), Positives = 33/94 (35%), Gaps = 8/94 (8%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQ----RAETTLA 65
D+ D++ + + G +D+LVNNAG G + A
Sbjct: 54 RAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTH--RNGPLLDVDEAEFDRIFA 111
Query: 66 TNFFALVTVCHILFPLLRPHAR--VVNVASKLGM 97
N + P +R +VNVAS G+
Sbjct: 112 VNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGL 145
|
Length = 251 |
| >gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 0.004
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI 47
+ N +F D+ ++ +I + G +D LVNNAGI
Sbjct: 45 DGQHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGI 87
|
Length = 266 |
| >gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 37.8 bits (88), Expect = 0.004
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 8/91 (8%)
Query: 12 RFHQL--DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQR-----AETTL 64
RF L D+ D +I L D + G +D+LVNNAGI R F ++ L
Sbjct: 53 RFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNL 112
Query: 65 ATNFFALVTVCHILFPLLRPHARVVNVASKL 95
+ FF R +++N+AS L
Sbjct: 113 KSVFFLTQAAAKHFLKQGR-GGKIINIASML 142
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 313 | |||
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.98 | |
| KOG1200|consensus | 256 | 99.95 | ||
| KOG1205|consensus | 282 | 99.93 | ||
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.93 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.93 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.93 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.93 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.92 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.92 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.92 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.92 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.92 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.92 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.92 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.91 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.91 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.91 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.91 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.9 | |
| KOG0725|consensus | 270 | 99.9 | ||
| KOG1201|consensus | 300 | 99.9 | ||
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.9 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.89 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.89 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.89 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.88 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.88 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.88 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.88 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.87 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.87 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.87 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.87 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.87 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.87 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.87 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.86 | |
| KOG1611|consensus | 249 | 99.86 | ||
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.86 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.86 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.86 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.86 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.85 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.85 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.85 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.85 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.85 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.85 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.85 | |
| KOG4169|consensus | 261 | 99.84 | ||
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.84 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.84 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.84 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.84 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.84 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.83 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.83 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.83 | |
| KOG1207|consensus | 245 | 99.83 | ||
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.83 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.83 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.83 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.83 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.82 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.82 | |
| KOG1610|consensus | 322 | 99.82 | ||
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.82 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.82 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.82 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.81 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.81 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.81 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.81 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.81 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.81 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.8 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.8 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.8 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.8 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.8 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.8 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.8 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.79 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.79 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.79 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.79 | |
| KOG1208|consensus | 314 | 99.79 | ||
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.79 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.79 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.79 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.78 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.78 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.78 | |
| KOG1209|consensus | 289 | 99.78 | ||
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.78 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.78 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.78 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.77 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.77 | |
| KOG1199|consensus | 260 | 99.77 | ||
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.76 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.76 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.76 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.76 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.76 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.75 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.74 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.74 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.74 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.73 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.73 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.72 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.71 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.7 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.69 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.69 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.69 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.69 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.68 | |
| KOG1204|consensus | 253 | 99.68 | ||
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.67 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.66 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 99.66 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.64 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.64 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.63 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.62 | |
| KOG1210|consensus | 331 | 99.61 | ||
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.61 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.61 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.59 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.59 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.59 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.58 | |
| KOG1014|consensus | 312 | 99.56 | ||
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.53 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.46 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.29 | |
| KOG1478|consensus | 341 | 99.21 | ||
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.19 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.12 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.07 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.07 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.01 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.0 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.99 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.98 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.96 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 98.96 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.96 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 98.95 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.94 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.94 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 98.9 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.89 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.85 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 98.83 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.83 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 98.81 | |
| KOG1207|consensus | 245 | 98.81 | ||
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 98.77 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 98.75 | |
| KOG1205|consensus | 282 | 98.73 | ||
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 98.71 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 98.7 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.65 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 98.63 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 98.61 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 98.6 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 98.56 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.55 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 98.53 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 98.52 | |
| KOG1201|consensus | 300 | 98.51 | ||
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 98.49 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 98.47 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.46 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 98.43 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 98.42 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 98.38 | |
| KOG1200|consensus | 256 | 98.3 | ||
| KOG1611|consensus | 249 | 98.3 | ||
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.28 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 98.24 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.23 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 98.22 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 98.16 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 98.16 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 98.15 | |
| KOG0725|consensus | 270 | 98.14 | ||
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 98.12 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.12 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.11 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.11 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.11 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 98.1 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 98.09 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 98.08 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 98.07 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 98.06 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 98.05 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 98.05 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 98.05 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 98.04 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 98.04 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 98.04 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 98.03 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 98.03 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 98.02 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 98.02 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 98.01 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 98.01 | |
| PRK08643 | 256 | acetoin reductase; Validated | 98.0 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 97.99 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 97.99 | |
| PLN00015 | 308 | protochlorophyllide reductase | 97.99 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 97.98 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 97.98 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 97.97 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 97.96 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 97.95 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 97.94 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 97.94 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 97.93 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 97.92 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 97.92 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 97.91 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 97.91 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 97.9 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 97.89 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 97.89 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 97.88 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 97.86 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 97.85 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 97.84 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 97.83 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 97.83 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 97.83 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 97.82 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 97.81 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 97.81 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 97.81 | |
| PRK05717 | 255 | oxidoreductase; Validated | 97.81 | |
| KOG4022|consensus | 236 | 97.8 | ||
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 97.79 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 97.79 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 97.78 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 97.78 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 97.77 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 97.77 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 97.76 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 97.76 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 97.76 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 97.75 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 97.75 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 97.75 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 97.74 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 97.72 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 97.72 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 97.71 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.7 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 97.69 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 97.68 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 97.68 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 97.67 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 97.66 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 97.66 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 97.66 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 97.66 | |
| KOG1199|consensus | 260 | 97.65 | ||
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 97.65 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 97.65 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 97.65 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 97.63 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 97.62 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 97.62 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 97.62 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 97.61 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 97.61 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 97.61 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 97.61 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.6 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 97.6 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 97.59 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 97.59 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 97.59 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 97.58 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 97.58 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.58 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 97.58 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 97.56 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 97.56 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 97.55 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 97.55 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 97.55 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 97.54 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 97.54 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 97.53 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 97.49 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.49 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 97.49 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 97.48 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 97.48 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 97.47 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 97.46 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 97.46 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 97.46 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 97.45 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 97.44 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.43 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 97.43 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 97.43 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 97.42 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 97.41 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 97.41 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 97.4 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.38 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.38 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 97.37 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 97.37 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 97.37 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.36 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 97.34 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 97.33 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 97.33 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 97.32 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.32 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 97.29 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 97.28 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 97.28 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 97.27 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 97.27 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.24 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 97.24 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 97.24 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 97.21 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 97.19 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 97.19 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 97.16 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 97.15 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 97.13 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 97.13 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 97.13 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 97.12 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 97.11 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.1 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 97.1 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 97.08 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 97.05 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 97.05 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 97.04 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 97.03 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 97.03 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 97.0 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 96.99 | |
| KOG1210|consensus | 331 | 96.99 | ||
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 96.95 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.91 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 96.9 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 96.87 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 96.85 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 96.83 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 96.82 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 96.81 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 96.8 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 96.76 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.74 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.71 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 96.63 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.62 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 96.61 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 96.39 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 96.38 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 96.37 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 96.35 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 96.33 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 96.32 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 96.32 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 96.31 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 96.29 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 96.28 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 96.2 | |
| KOG1208|consensus | 314 | 96.14 | ||
| PLN02427 | 386 | UDP-apiose/xylose synthase | 96.09 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 96.03 | |
| KOG1610|consensus | 322 | 95.97 | ||
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 95.93 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 95.68 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 95.67 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 95.64 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 95.57 | |
| KOG1014|consensus | 312 | 95.55 | ||
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 95.49 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 95.48 | |
| KOG1502|consensus | 327 | 95.46 | ||
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 95.18 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 95.17 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 95.12 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 95.0 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 94.91 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 94.89 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 94.86 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.84 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 94.84 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 94.82 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 94.77 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 94.71 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 94.57 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 94.47 | |
| KOG1371|consensus | 343 | 93.99 | ||
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 93.98 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 93.94 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 93.91 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 93.65 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 93.63 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 93.53 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 93.31 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 93.31 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 93.3 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 93.23 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 93.2 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 92.92 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 92.82 |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.1e-31 Score=263.30 Aligned_cols=258 Identities=21% Similarity=0.219 Sum_probs=200.6
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD--TAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~--~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
++.+.++.+++||++|+++++++++.+.+++|++|+||||||+... .++.+.+ ++|++++++|+.+++.+++++.|.
T Consensus 47 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (520)
T PRK06484 47 DSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRL 126 (520)
T ss_pred HHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3456678889999999999999999999999999999999998432 3455555 999999999999999999999999
Q ss_pred ccC---CceEEEEeccccc-----------------------------------------c-cCC---------------
Q psy2266 82 LRP---HARVVNVASKLGM-----------------------------------------L-YNV--------------- 101 (313)
Q Consensus 82 m~~---~g~IV~isS~~~~-----------------------------------------~-~~~--------------- 101 (313)
|++ +++||+++|..+. . .+.
T Consensus 127 ~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~ 206 (520)
T PRK06484 127 MIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAV 206 (520)
T ss_pred HHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHH
Confidence 953 3499999987654 0 000
Q ss_pred ----C------chh------------------------------------------------------------hhh---
Q psy2266 102 ----P------SQE------------------------------------------------------------LRQ--- 108 (313)
Q Consensus 102 ----~------~~~------------------------------------------------------------~~~--- 108 (313)
+ .++ ++.
T Consensus 207 ~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~G~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~k~~lItGas~gIG~~~a 286 (520)
T PRK06484 207 RSRIPLGRLGRPEEIAEAVFFLASDQASYITGSTLVVDGGWTVYGGSGPASTAQAPSPLAESPRVVAITGGARGIGRAVA 286 (520)
T ss_pred HhcCCCCCCcCHHHHHHHHHHHhCccccCccCceEEecCCeeccccccCCCCccCCCCcccCCCEEEEECCCcHHHHHHH
Confidence 0 000 000
Q ss_pred --------------------------------hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-CCc----ch
Q psy2266 109 --------------------------------TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-GSF----GQ 151 (313)
Q Consensus 109 --------------------------------~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~~~----~~ 151 (313)
...+|..++++++++++.+.+.+|++|+||||||.... .++ .+
T Consensus 287 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~ 366 (520)
T PRK06484 287 DRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAE 366 (520)
T ss_pred HHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHH
Confidence 02346678899999999999999999999999998643 343 36
Q ss_pred hhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhccccc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKE 231 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (313)
+|+.++++|+.|++++++.++|.|+++|+||++||.++...
T Consensus 367 ~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------------------------------- 407 (520)
T PRK06484 367 DFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA--------------------------------------- 407 (520)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC---------------------------------------
Confidence 89999999999999999999999977799999999998752
Q ss_pred CCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 232 AGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 232 ~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
..+..+|++||+|+..|++.++.++.+. ||+||+|+||+|+|++........+...+......|++|.++
T Consensus 408 -~~~~~~Y~asKaal~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (520)
T PRK06484 408 -LPPRNAYCASKAAVTMLSRSLACEWAPA----GIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGD 477 (520)
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHhhhh----CeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcC
Confidence 2344579999999999999999988766 999999999999999875432111222223334456666543
|
|
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.3e-29 Score=214.78 Aligned_cols=169 Identities=20% Similarity=0.297 Sum_probs=140.3
Q ss_pred cccCCC--ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 4 CKNNNN--NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 4 ~~~~g~--~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
++++++ +...+.|||++..+++.+++...+++|++++|||||||.++..+..+. ++|++.+.+|+.|.|.++|++.+
T Consensus 55 a~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r 134 (256)
T KOG1200|consen 55 AGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVR 134 (256)
T ss_pred HhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHH
Confidence 345555 778899999999999999999999999999999999999998777776 99999999999999999999888
Q ss_pred cccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcc
Q psy2266 81 LLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATN 160 (313)
Q Consensus 81 ~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N 160 (313)
.|....
T Consensus 135 ~~~~~~-------------------------------------------------------------------------- 140 (256)
T KOG1200|consen 135 AMVMNQ-------------------------------------------------------------------------- 140 (256)
T ss_pred HHHHhc--------------------------------------------------------------------------
Confidence 642200
Q ss_pred cccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchh
Q psy2266 161 FFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYS 240 (313)
Q Consensus 161 ~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 240 (313)
+.+.+||||||..|.. +..+...|+
T Consensus 141 ---------------~~~~sIiNvsSIVGki----------------------------------------GN~GQtnYA 165 (256)
T KOG1200|consen 141 ---------------QQGLSIINVSSIVGKI----------------------------------------GNFGQTNYA 165 (256)
T ss_pred ---------------CCCceEEeehhhhccc----------------------------------------ccccchhhh
Confidence 1124667777776655 233455699
Q ss_pred hhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 241 VSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 241 ~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
+||+++++|+|..++|++++ +||||.|+||+|.|||++. .+|...+......|++|.|+..
T Consensus 166 AsK~GvIgftktaArEla~k----nIrvN~VlPGFI~tpMT~~---mp~~v~~ki~~~iPmgr~G~~E 226 (256)
T KOG1200|consen 166 ASKGGVIGFTKTAARELARK----NIRVNVVLPGFIATPMTEA---MPPKVLDKILGMIPMGRLGEAE 226 (256)
T ss_pred hhcCceeeeeHHHHHHHhhc----CceEeEeccccccChhhhh---cCHHHHHHHHccCCccccCCHH
Confidence 99999999999999999988 9999999999999999998 4777777778889999999753
|
|
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=207.34 Aligned_cols=138 Identities=26% Similarity=0.286 Sum_probs=108.9
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++++++|||+|++++.++++++.++||++|+||||||+.....++++. ++++.
T Consensus 64 ~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~-------------------------- 117 (282)
T KOG1205|consen 64 KVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRN-------------------------- 117 (282)
T ss_pred ccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHH--------------------------
Confidence 489999999999999999999999999999999999999844444444 44444
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
+|+||++|+++++
T Consensus 118 -------------------------------------------------------------------~mdtN~~G~V~~T 130 (282)
T KOG1205|consen 118 -------------------------------------------------------------------VMDTNVFGTVYLT 130 (282)
T ss_pred -------------------------------------------------------------------HhhhhchhhHHHH
Confidence 4566666666666
Q ss_pred HHHhhcccC--CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 169 HILFPLLRP--HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 169 ~~~~p~l~~--~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
++++|+|++ +|+||++||.+|.... +....|++||+|+
T Consensus 131 k~alp~m~~r~~GhIVvisSiaG~~~~----------------------------------------P~~~~Y~ASK~Al 170 (282)
T KOG1205|consen 131 KAALPSMKKRNDGHIVVISSIAGKMPL----------------------------------------PFRSIYSASKHAL 170 (282)
T ss_pred HHHHHHhhhcCCCeEEEEeccccccCC----------------------------------------CcccccchHHHHH
Confidence 667777755 3899999999987632 2223699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..|+.+|+.|+... .-.|++ +|+||+|+|++...
T Consensus 171 ~~f~etLR~El~~~--~~~i~i-~V~PG~V~Te~~~~ 204 (282)
T KOG1205|consen 171 EGFFETLRQELIPL--GTIIII-LVSPGPIETEFTGK 204 (282)
T ss_pred HHHHHHHHHHhhcc--CceEEE-EEecCceeecccch
Confidence 99999999998876 112677 99999999997544
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-25 Score=206.20 Aligned_cols=86 Identities=15% Similarity=0.305 Sum_probs=67.6
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC----CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD----TAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~----~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
.+.. ..++||++|.++++++++.+.+++|++|+||||||+... .++.+++ ++|++++++|+.+++.++|++.|.
T Consensus 54 ~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~ 132 (274)
T PRK08415 54 LGSD-YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPL 132 (274)
T ss_pred cCCc-eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 3444 678999999999999999999999999999999998642 3455655 899999988888888877777776
Q ss_pred ccCCceEEEEec
Q psy2266 82 LRPHARVVNVAS 93 (313)
Q Consensus 82 m~~~g~IV~isS 93 (313)
|+++|+||++||
T Consensus 133 m~~~g~Iv~isS 144 (274)
T PRK08415 133 LNDGASVLTLSY 144 (274)
T ss_pred hccCCcEEEEec
Confidence 655444444444
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-25 Score=205.14 Aligned_cols=159 Identities=16% Similarity=0.113 Sum_probs=117.4
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC----CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD----TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~----~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
...++||++|.++++++++.+.+++|+||+||||||+... .++.+++ ++|++++++|+++++.++|+++|.|+++
T Consensus 59 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~ 138 (271)
T PRK06505 59 DFVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDG 138 (271)
T ss_pred ceEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccC
Confidence 3578999999999999999999999999999999998653 2445555 8999999888888888888777776554
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
|+||
T Consensus 139 G~Iv---------------------------------------------------------------------------- 142 (271)
T PRK06505 139 GSML---------------------------------------------------------------------------- 142 (271)
T ss_pred ceEE----------------------------------------------------------------------------
Confidence 4444
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
++||..+... .....+|++||+|
T Consensus 143 -----------------~isS~~~~~~----------------------------------------~~~~~~Y~asKaA 165 (271)
T PRK06505 143 -----------------TLTYGGSTRV----------------------------------------MPNYNVMGVAKAA 165 (271)
T ss_pred -----------------EEcCCCcccc----------------------------------------CCccchhhhhHHH
Confidence 5544444321 1223469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+..|+|.++.+++++ |||||+|+||+|+|++...... ............|++|.++.
T Consensus 166 l~~l~r~la~el~~~----gIrVn~v~PG~i~T~~~~~~~~-~~~~~~~~~~~~p~~r~~~p 222 (271)
T PRK06505 166 LEASVRYLAADYGPQ----GIRVNAISAGPVRTLAGAGIGD-ARAIFSYQQRNSPLRRTVTI 222 (271)
T ss_pred HHHHHHHHHHHHhhc----CeEEEEEecCCccccccccCcc-hHHHHHHHhhcCCccccCCH
Confidence 999999999998766 9999999999999998643210 11111222334577776653
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.2e-25 Score=198.38 Aligned_cols=144 Identities=21% Similarity=0.274 Sum_probs=115.4
Q ss_pred ccccCC-CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 3 VCKNNN-NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 3 ~~~~~g-~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
++.+++ +++.++.+||+|.++++++++.+.++||+||+||||||.....++.+.. ++|++|+++|+.|.++.+|+++|
T Consensus 46 la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP 125 (246)
T COG4221 46 LADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLP 125 (246)
T ss_pred HHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 445566 6889999999999999999999999999999999999998877666665 66666666555555555555555
Q ss_pred cccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcc
Q psy2266 81 LLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATN 160 (313)
Q Consensus 81 ~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N 160 (313)
.|.+
T Consensus 126 ~m~~---------------------------------------------------------------------------- 129 (246)
T COG4221 126 GMVE---------------------------------------------------------------------------- 129 (246)
T ss_pred HHHh----------------------------------------------------------------------------
Confidence 5433
Q ss_pred cccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchh
Q psy2266 161 FFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYS 240 (313)
Q Consensus 161 ~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 240 (313)
+++|.|||+||.+|.. .+++...|+
T Consensus 130 ---------------r~~G~IiN~~SiAG~~----------------------------------------~y~~~~vY~ 154 (246)
T COG4221 130 ---------------RKSGHIINLGSIAGRY----------------------------------------PYPGGAVYG 154 (246)
T ss_pred ---------------cCCceEEEeccccccc----------------------------------------cCCCCccch
Confidence 3358899999999876 345556799
Q ss_pred hhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 241 VSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 241 ~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
+||+++..|+..|+.++... +|||.+|+||.|.|++.
T Consensus 155 ATK~aV~~fs~~LR~e~~g~----~IRVt~I~PG~v~~~~~ 191 (246)
T COG4221 155 ATKAAVRAFSLGLRQELAGT----GIRVTVISPGLVETTEF 191 (246)
T ss_pred hhHHHHHHHHHHHHHHhcCC----CeeEEEecCceecceec
Confidence 99999999999999988766 99999999999977643
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-25 Score=202.91 Aligned_cols=162 Identities=19% Similarity=0.175 Sum_probs=114.7
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC----CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD----TAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~----~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
+.++.+++||++|+++++++++.+.+++|++|+||||||+... .++.+++ ++|++++
T Consensus 58 ~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~------------------ 119 (258)
T PRK07370 58 LNPSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARAL------------------ 119 (258)
T ss_pred cCcceEeecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHh------------------
Confidence 3456788999999999999999999999999999999998642 2344443 5555555
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++|+.
T Consensus 120 ---------------------------------------------------------------------------~iN~~ 124 (258)
T PRK07370 120 ---------------------------------------------------------------------------EISAY 124 (258)
T ss_pred ---------------------------------------------------------------------------eeeeH
Confidence 55555
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
|++.+++.++|.|+++|+||++||..+... .....+|++|
T Consensus 125 ~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~----------------------------------------~~~~~~Y~as 164 (258)
T PRK07370 125 SLAPLCKAAKPLMSEGGSIVTLTYLGGVRA----------------------------------------IPNYNVMGVA 164 (258)
T ss_pred HHHHHHHHHHHHHhhCCeEEEEeccccccC----------------------------------------CcccchhhHH
Confidence 555555555555555566777777665431 1233469999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+|+..|++.++.+++++ ||+||+|+||+|+|++.+... ..++..+......|++|+++.
T Consensus 165 Kaal~~l~~~la~el~~~----gI~Vn~i~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~~r~~~~ 224 (258)
T PRK07370 165 KAALEASVRYLAAELGPK----NIRVNAISAGPIRTLASSAVG-GILDMIHHVEEKAPLRRTVTQ 224 (258)
T ss_pred HHHHHHHHHHHHHHhCcC----CeEEEEEecCcccCchhhccc-cchhhhhhhhhcCCcCcCCCH
Confidence 999999999999988765 999999999999999865431 112222333345677777654
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.9e-25 Score=199.69 Aligned_cols=161 Identities=16% Similarity=0.078 Sum_probs=119.4
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC----CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD----TAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~----~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
.++..++||++|+++++++++.+.+++|++|+||||||+... .++.+++ ++|++++++|+.+++.++|++.|.|+
T Consensus 55 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~ 134 (252)
T PRK06079 55 EEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLN 134 (252)
T ss_pred CceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcc
Confidence 457789999999999999999999999999999999998753 3555555 88998888777777777777666665
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
++
T Consensus 135 ~~------------------------------------------------------------------------------ 136 (252)
T PRK06079 135 PG------------------------------------------------------------------------------ 136 (252)
T ss_pred cC------------------------------------------------------------------------------
Confidence 44
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
|+||++||..+... .....+|++||
T Consensus 137 ---------------g~Iv~iss~~~~~~----------------------------------------~~~~~~Y~asK 161 (252)
T PRK06079 137 ---------------ASIVTLTYFGSERA----------------------------------------IPNYNVMGIAK 161 (252)
T ss_pred ---------------ceEEEEeccCcccc----------------------------------------CCcchhhHHHH
Confidence 44555555444321 12234699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+|+.+|+|.++.+++++ ||+||+|+||+|+|++..... ..++..+......|++|+++.
T Consensus 162 aal~~l~~~la~el~~~----gI~vn~i~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~~r~~~p 220 (252)
T PRK06079 162 AALESSVRYLARDLGKK----GIRVNAISAGAVKTLAVTGIK-GHKDLLKESDSRTVDGVGVTI 220 (252)
T ss_pred HHHHHHHHHHHHHhhhc----CcEEEEEecCcccccccccCC-ChHHHHHHHHhcCcccCCCCH
Confidence 99999999999998766 999999999999999865431 112222333445677887654
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=200.31 Aligned_cols=158 Identities=17% Similarity=0.157 Sum_probs=118.9
Q ss_pred eEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC----CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD----TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 12 ~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~----~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
.+++||++|+++++++++.+.+++|++|+||||||+... .++.+++ ++|++++++|+++++.++|++.|.|+++|
T Consensus 61 ~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G 140 (260)
T PRK06603 61 FVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGG 140 (260)
T ss_pred eEEEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCc
Confidence 467899999999999999999999999999999998642 3455555 89999999999998888888777775555
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
+||+++|
T Consensus 141 ~Iv~isS------------------------------------------------------------------------- 147 (260)
T PRK06603 141 SIVTLTY------------------------------------------------------------------------- 147 (260)
T ss_pred eEEEEec-------------------------------------------------------------------------
Confidence 5555554
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
..+.. +.....+|++||+|+
T Consensus 148 --------------------~~~~~----------------------------------------~~~~~~~Y~asKaal 167 (260)
T PRK06603 148 --------------------YGAEK----------------------------------------VIPNYNVMGVAKAAL 167 (260)
T ss_pred --------------------Ccccc----------------------------------------CCCcccchhhHHHHH
Confidence 43322 012234699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
..|+|.++.+++++ ||+||+|+||+|+|++..... ..++..+......|++|+++.
T Consensus 168 ~~l~~~la~el~~~----gIrVn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~~r~~~p 223 (260)
T PRK06603 168 EASVKYLANDMGEN----NIRVNAISAGPIKTLASSAIG-DFSTMLKSHAATAPLKRNTTQ 223 (260)
T ss_pred HHHHHHHHHHhhhc----CeEEEEEecCcCcchhhhcCC-CcHHHHHHHHhcCCcCCCCCH
Confidence 99999999998766 999999999999999865321 112222333345688887654
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=198.98 Aligned_cols=168 Identities=23% Similarity=0.281 Sum_probs=123.0
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.++++|++|+++++++++.+.+++|++|+||||||+....++.+++ ++|++++++|+.+++.+++++.+.|+
T Consensus 51 ~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~ 130 (251)
T PRK12481 51 EALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFV 130 (251)
T ss_pred HHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHH
Confidence 34567788999999999999999999999999999999999997766555555 77777776666666666666666553
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 131 ~~------------------------------------------------------------------------------ 132 (251)
T PRK12481 131 KQ------------------------------------------------------------------------------ 132 (251)
T ss_pred Hc------------------------------------------------------------------------------
Confidence 21
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
..+|+||++||..+... .....+|++||
T Consensus 133 ------------~~~g~ii~isS~~~~~~----------------------------------------~~~~~~Y~asK 160 (251)
T PRK12481 133 ------------GNGGKIINIASMLSFQG----------------------------------------GIRVPSYTASK 160 (251)
T ss_pred ------------CCCCEEEEeCChhhcCC----------------------------------------CCCCcchHHHH
Confidence 01266777777666431 22335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+|+..|++.++.++++. ||+||+|+||+|+|++.+.... .++..+......|++|+++.
T Consensus 161 ~a~~~l~~~la~e~~~~----girvn~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~p~~~~~~p 219 (251)
T PRK12481 161 SAVMGLTRALATELSQY----NINVNAIAPGYMATDNTAALRA-DTARNEAILERIPASRWGTP 219 (251)
T ss_pred HHHHHHHHHHHHHHhhc----CeEEEEEecCCCccCchhhccc-ChHHHHHHHhcCCCCCCcCH
Confidence 99999999999998766 9999999999999998765311 12222233445677776653
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-24 Score=197.59 Aligned_cols=159 Identities=13% Similarity=0.094 Sum_probs=116.5
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC----C-CCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT----A-PGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~----~-~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
...++||++|+++++++++.+.+++|++|+||||||+.... + +++++ ++|++.+++|+.+++.++|+++|.|++
T Consensus 58 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~ 137 (260)
T PRK06997 58 DLVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD 137 (260)
T ss_pred cceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 35789999999999999999999999999999999986532 1 33444 889999988888888888777776654
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
+|+
T Consensus 138 ~g~----------------------------------------------------------------------------- 140 (260)
T PRK06997 138 DAS----------------------------------------------------------------------------- 140 (260)
T ss_pred Cce-----------------------------------------------------------------------------
Confidence 444
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
||++||..+.. +.....+|++||+
T Consensus 141 ----------------Ii~iss~~~~~----------------------------------------~~~~~~~Y~asKa 164 (260)
T PRK06997 141 ----------------LLTLSYLGAER----------------------------------------VVPNYNTMGLAKA 164 (260)
T ss_pred ----------------EEEEecccccc----------------------------------------CCCCcchHHHHHH
Confidence 55555544432 1122346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|++.|+|+++.+++++ ||+||+|+||+|+|++...... .++..+......|++|.+..
T Consensus 165 al~~l~~~la~el~~~----gIrVn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~r~~~p 222 (260)
T PRK06997 165 SLEASVRYLAVSLGPK----GIRANGISAGPIKTLAASGIKD-FGKILDFVESNAPLRRNVTI 222 (260)
T ss_pred HHHHHHHHHHHHhccc----CeEEEEEeeCccccchhccccc-hhhHHHHHHhcCcccccCCH
Confidence 9999999999998766 9999999999999998654211 11222223344578887654
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=197.80 Aligned_cols=162 Identities=15% Similarity=0.051 Sum_probs=118.6
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC----CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD----TAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~----~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
+.++..++||++|+++++++++.+.+++|+||+||||||+... .++.+++ ++|++++++|+.+++.++|++.|.|
T Consensus 58 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 137 (257)
T PRK08594 58 GQESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLM 137 (257)
T ss_pred CCceEEEecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 4568889999999999999999999999999999999998642 3445555 8888888888888877777776666
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
+++
T Consensus 138 ~~~----------------------------------------------------------------------------- 140 (257)
T PRK08594 138 TEG----------------------------------------------------------------------------- 140 (257)
T ss_pred ccC-----------------------------------------------------------------------------
Confidence 544
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
|+||++||..+... .....+|++|
T Consensus 141 ----------------g~Iv~isS~~~~~~----------------------------------------~~~~~~Y~as 164 (257)
T PRK08594 141 ----------------GSIVTLTYLGGERV----------------------------------------VQNYNVMGVA 164 (257)
T ss_pred ----------------ceEEEEcccCCccC----------------------------------------CCCCchhHHH
Confidence 45555555554331 1223469999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+|+..|+|.++.+++++ ||+||+|+||+|+|++.+.... .++..+......|++|+++.
T Consensus 165 Kaal~~l~~~la~el~~~----gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~r~~~p 224 (257)
T PRK08594 165 KASLEASVKYLANDLGKD----GIRVNAISAGPIRTLSAKGVGG-FNSILKEIEERAPLRRTTTQ 224 (257)
T ss_pred HHHHHHHHHHHHHHhhhc----CCEEeeeecCcccCHhHhhhcc-ccHHHHHHhhcCCccccCCH
Confidence 999999999999988766 9999999999999998643211 11111222334566666543
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-24 Score=198.02 Aligned_cols=160 Identities=16% Similarity=0.126 Sum_probs=113.1
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC-----CCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA-----PGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~-----~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
....++||++|+++++++++.+.+++|+||+||||||+..... +++++ ++|+.++++|+++++.++|
T Consensus 57 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~------- 129 (261)
T PRK08690 57 SELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAK------- 129 (261)
T ss_pred CceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHH-------
Confidence 3567899999999999999999999999999999999975321 22233 4555555555555555555
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
T Consensus 130 -------------------------------------------------------------------------------- 129 (261)
T PRK08690 130 -------------------------------------------------------------------------------- 129 (261)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhcccC-CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 164 LVTVCHILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 164 ~~~~~~~~~p~l~~-~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
.++|.|++ +|+||++||..+... ..+..+|++|
T Consensus 130 ------~~~p~m~~~~g~Iv~iss~~~~~~----------------------------------------~~~~~~Y~as 163 (261)
T PRK08690 130 ------AARPMMRGRNSAIVALSYLGAVRA----------------------------------------IPNYNVMGMA 163 (261)
T ss_pred ------HHHHHhhhcCcEEEEEcccccccC----------------------------------------CCCcccchhH
Confidence 44454433 366777777666431 1233569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+|+..|+|.++.+++++ ||+||+|+||+|+|++..... ..++..+......|++|+++.
T Consensus 164 Kaal~~l~~~la~e~~~~----gIrVn~i~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~~r~~~p 223 (261)
T PRK08690 164 KASLEAGIRFTAACLGKE----GIRCNGISAGPIKTLAASGIA-DFGKLLGHVAAHNPLRRNVTI 223 (261)
T ss_pred HHHHHHHHHHHHHHhhhc----CeEEEEEecCcccchhhhcCC-chHHHHHHHhhcCCCCCCCCH
Confidence 999999999999988766 999999999999999865431 112222223345688887764
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-24 Score=197.01 Aligned_cols=159 Identities=13% Similarity=0.092 Sum_probs=118.8
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC----CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD----TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~----~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
+..++||++|.++++++++.+.++||+||+||||||+... .++.+++ ++|++++++|+.+++.++|++.|.|+++
T Consensus 62 ~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~ 141 (258)
T PRK07533 62 PIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG 141 (258)
T ss_pred ceEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC
Confidence 5678999999999999999999999999999999998653 3455555 8999999888888888888877777655
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
|+||+++|
T Consensus 142 g~Ii~iss------------------------------------------------------------------------ 149 (258)
T PRK07533 142 GSLLTMSY------------------------------------------------------------------------ 149 (258)
T ss_pred CEEEEEec------------------------------------------------------------------------
Confidence 55555554
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
..+... .....+|++||+|
T Consensus 150 ---------------------~~~~~~----------------------------------------~~~~~~Y~asKaa 168 (258)
T PRK07533 150 ---------------------YGAEKV----------------------------------------VENYNLMGPVKAA 168 (258)
T ss_pred ---------------------cccccC----------------------------------------CccchhhHHHHHH
Confidence 333220 1122469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+..|+|+++.+++++ ||+||+|+||+|+|++.+.... .++..+......|++|.++.
T Consensus 169 l~~l~~~la~el~~~----gI~Vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~r~~~p 225 (258)
T PRK07533 169 LESSVRYLAAELGPK----GIRVHAISPGPLKTRAASGIDD-FDALLEDAAERAPLRRLVDI 225 (258)
T ss_pred HHHHHHHHHHHhhhc----CcEEEEEecCCcCChhhhccCC-cHHHHHHHHhcCCcCCCCCH
Confidence 999999999998766 9999999999999999754311 11222223345677776543
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-25 Score=200.39 Aligned_cols=164 Identities=26% Similarity=0.279 Sum_probs=130.4
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHc-CCCcEEEECCCCCCC----CCCCChh-HHHHHHHhHHHHHHHHHHHH
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQH-GGLDLLVNNAGIYRD----TAPGSFG-QRAETTLATNFFALVTVCHI 77 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~-g~iDilVnNAGi~~~----~~~~~~~-~~~~~~~~vNl~~~i~l~ra 77 (313)
.++.+.+ +++||++++++++++++.+.+++ |+||+||||+|.... .++.+.+ ++|++.+++|+++++.++|+
T Consensus 41 ~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (241)
T PF13561_consen 41 AKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQA 118 (241)
T ss_dssp HHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3445544 59999999999999999999999 999999999999875 4666666 99999999999999888888
Q ss_pred HHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhh
Q psy2266 78 LFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTL 157 (313)
Q Consensus 78 ~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~ 157 (313)
+.|+|+++|+||+++|..+..
T Consensus 119 ~~~~~~~~gsii~iss~~~~~----------------------------------------------------------- 139 (241)
T PF13561_consen 119 ALPLMKKGGSIINISSIAAQR----------------------------------------------------------- 139 (241)
T ss_dssp HHHHHHHEEEEEEEEEGGGTS-----------------------------------------------------------
T ss_pred HHHHHhhCCCcccccchhhcc-----------------------------------------------------------
Confidence 888777766666666644222
Q ss_pred hcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCC
Q psy2266 158 ATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEF 237 (313)
Q Consensus 158 ~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
+ ..+..
T Consensus 140 ----------------------------------~----------------------------------------~~~~~ 145 (241)
T PF13561_consen 140 ----------------------------------P----------------------------------------MPGYS 145 (241)
T ss_dssp ----------------------------------B----------------------------------------STTTH
T ss_pred ----------------------------------c----------------------------------------Cccch
Confidence 1 12223
Q ss_pred chhhhHHHHHHHHHHHHhhhcc-CCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 238 SYSVSKLGVAKLSFIQHATLSK-DKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 238 ~Y~~sK~al~~l~~~~~~~l~~-~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
.|+++|+|++.|+|.++.+|++ + |||||+|+||+|+|++.+... ..++..+......|++|.++.
T Consensus 146 ~y~~sKaal~~l~r~lA~el~~~~----gIrVN~V~pG~i~t~~~~~~~-~~~~~~~~~~~~~pl~r~~~~ 211 (241)
T PF13561_consen 146 AYSASKAALEGLTRSLAKELAPKK----GIRVNAVSPGPIETPMTERIP-GNEEFLEELKKRIPLGRLGTP 211 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGHG----TEEEEEEEESSBSSHHHHHHH-THHHHHHHHHHHSTTSSHBEH
T ss_pred hhHHHHHHHHHHHHHHHHHhcccc----Ceeeeeecccceeccchhccc-cccchhhhhhhhhccCCCcCH
Confidence 6999999999999999999998 7 999999999999999866531 234555666788899997754
|
... |
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.6e-24 Score=196.82 Aligned_cols=161 Identities=11% Similarity=0.073 Sum_probs=116.2
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC-----CCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA-----PGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~-----~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
+.+..+.||++|+++++++++.+.++||++|+||||||+..... +.+++ ++|++++++|+.+++.++|++.|.|
T Consensus 56 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 135 (262)
T PRK07984 56 GSDIVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML 135 (262)
T ss_pred CCceEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHh
Confidence 34678899999999999999999999999999999999865322 33444 8888888888888877777766654
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
+++
T Consensus 136 ~~~----------------------------------------------------------------------------- 138 (262)
T PRK07984 136 NPG----------------------------------------------------------------------------- 138 (262)
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 443
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
|+||++||..+.. +.....+|++|
T Consensus 139 ----------------g~Iv~iss~~~~~----------------------------------------~~~~~~~Y~as 162 (262)
T PRK07984 139 ----------------SALLTLSYLGAER----------------------------------------AIPNYNVMGLA 162 (262)
T ss_pred ----------------cEEEEEecCCCCC----------------------------------------CCCCcchhHHH
Confidence 4555555544432 11233569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+|+.+|+|.++.++++. ||+||+|+||+|+|++...... ..+..+......|++|+++.
T Consensus 163 Kaal~~l~~~la~el~~~----gIrVn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~r~~~p 222 (262)
T PRK07984 163 KASLEANVRYMANAMGPE----GVRVNAISAGPIRTLAASGIKD-FRKMLAHCEAVTPIRRTVTI 222 (262)
T ss_pred HHHHHHHHHHHHHHhccc----CcEEeeeecCcccchHHhcCCc-hHHHHHHHHHcCCCcCCCCH
Confidence 999999999999998766 9999999999999997543211 11111222344577776653
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-24 Score=197.16 Aligned_cols=164 Identities=16% Similarity=0.125 Sum_probs=121.3
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.++++|++|+++++++++.+. ++|++|+||||||+.....+.+.+ ++|++++++|+.+++.++|+++|.|++.
T Consensus 57 ~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~- 134 (263)
T PRK08339 57 NVDVSYIVADLTKREDLERTVKELK-NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK- 134 (263)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHH-hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-
Confidence 5578899999999999999999986 689999999999987656666665 8888888777777777777777766441
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 135 -------------------------------------------------------------------------------- 134 (263)
T PRK08339 135 -------------------------------------------------------------------------------- 134 (263)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+.|+||++||..+... ......|+++|+|+
T Consensus 135 ----------~~g~Ii~isS~~~~~~----------------------------------------~~~~~~y~asKaal 164 (263)
T PRK08339 135 ----------GFGRIIYSTSVAIKEP----------------------------------------IPNIALSNVVRISM 164 (263)
T ss_pred ----------CCCEEEEEcCccccCC----------------------------------------CCcchhhHHHHHHH
Confidence 1256666666665431 12234599999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccccC-------CCC-cchhhhhhhhhhcccCCcc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG-------VLT-PEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~-------~~~-~~~~~~~~~~~~l~r~~~~ 307 (313)
..|+|.++.+++++ |||||+|+||+|+|++..... ... ++..+......|++|.++.
T Consensus 165 ~~l~~~la~el~~~----gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 229 (263)
T PRK08339 165 AGLVRTLAKELGPK----GITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEP 229 (263)
T ss_pred HHHHHHHHHHhccc----CeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCH
Confidence 99999999998866 999999999999999864321 011 1222233445688887654
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8e-24 Score=196.02 Aligned_cols=83 Identities=14% Similarity=0.251 Sum_probs=68.2
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC----CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD----TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~----~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
...++||++|+++++++++.+.+++|+||+||||||+... .++.+++ ++|++++++|+.+++.++|++.|.|+++
T Consensus 62 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~ 141 (272)
T PRK08159 62 FVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDG 141 (272)
T ss_pred ceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 5678999999999999999999999999999999998753 3455555 8999999999988888888877777655
Q ss_pred ceEEEEec
Q psy2266 86 ARVVNVAS 93 (313)
Q Consensus 86 g~IV~isS 93 (313)
|+||+++|
T Consensus 142 g~Iv~iss 149 (272)
T PRK08159 142 GSILTLTY 149 (272)
T ss_pred ceEEEEec
Confidence 55555554
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.3e-24 Score=193.54 Aligned_cols=86 Identities=19% Similarity=0.307 Sum_probs=69.3
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC----CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD----TAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~----~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
.+.++.+++||++|+++++++++.+.+++|++|+||||||+... .++.+.+ ++|++++++|+.+++.++|++.|.
T Consensus 55 ~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 134 (256)
T PRK07889 55 LPEPAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPL 134 (256)
T ss_pred cCCCCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 34467789999999999999999999999999999999998753 2344444 889999988888888888887777
Q ss_pred ccCCceEEEEe
Q psy2266 82 LRPHARVVNVA 92 (313)
Q Consensus 82 m~~~g~IV~is 92 (313)
|+++|+||+++
T Consensus 135 m~~~g~Iv~is 145 (256)
T PRK07889 135 MNEGGSIVGLD 145 (256)
T ss_pred cccCceEEEEe
Confidence 76555555544
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-23 Score=197.15 Aligned_cols=73 Identities=10% Similarity=0.260 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHcCCCcEEEECCCCCC--CCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEec
Q psy2266 21 QSSIHKLHDDIQTQHGGLDLLVNNAGIYR--DTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNVAS 93 (313)
Q Consensus 21 ~~~v~~~~~~v~~~~g~iDilVnNAGi~~--~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS 93 (313)
.++++++++.+.++||+||+||||||+.. ..++.+.+ ++|++++++|+++++.++|+++|.|+++|+||+++|
T Consensus 104 ~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~II~isS 179 (303)
T PLN02730 104 NWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGASISLTY 179 (303)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEec
Confidence 34899999999999999999999998653 24666666 999999999999988888888887765555555544
|
|
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-23 Score=193.54 Aligned_cols=165 Identities=26% Similarity=0.289 Sum_probs=119.7
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHH-cCCCcEEEECCCCCCCC-CCCChh-HHHHHHHhHHHHHH-HHHHHHHHhccc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQ-HGGLDLLVNNAGIYRDT-APGSFG-QRAETTLATNFFAL-VTVCHILFPLLR 83 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~-~g~iDilVnNAGi~~~~-~~~~~~-~~~~~~~~vNl~~~-i~l~ra~~~~m~ 83 (313)
+.++..+.||++++++++++++.+.++ ||+||+||||||+.... +..+++ ++|++++++|+.|+ +.+.+++.++++
T Consensus 59 ~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~ 138 (270)
T KOG0725|consen 59 GGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLK 138 (270)
T ss_pred CCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHH
Confidence 456899999999999999999999998 79999999999998866 566666 88888777777743 333333333332
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 139 ~------------------------------------------------------------------------------- 139 (270)
T KOG0725|consen 139 K------------------------------------------------------------------------------- 139 (270)
T ss_pred h-------------------------------------------------------------------------------
Confidence 2
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCC-Cchhhh
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPE-FSYSVS 242 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~s 242 (313)
.++|.|+++||..+... .++. .+|++|
T Consensus 140 ------------~~gg~I~~~ss~~~~~~----------------------------------------~~~~~~~Y~~s 167 (270)
T KOG0725|consen 140 ------------SKGGSIVNISSVAGVGP----------------------------------------GPGSGVAYGVS 167 (270)
T ss_pred ------------cCCceEEEEeccccccC----------------------------------------CCCCcccchhH
Confidence 12366777777776542 2233 579999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCc---chhhh--hhhhhhcccCCccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTP---EQGKI--RQKIYLLKRTNKFQ 308 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~--~~~~~~l~r~~~~~ 308 (313)
|+|+.+|+|.+|.||.++ |||||+|+||.|.|++ ........ +..+. .....|++|.|+..
T Consensus 168 K~al~~ltr~lA~El~~~----gIRvN~v~PG~i~T~~-~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~ 233 (270)
T KOG0725|consen 168 KAALLQLTRSLAKELAKH----GIRVNSVSPGLVKTSL-RAAGLDDGEMEEFKEATDSKGAVPLGRVGTPE 233 (270)
T ss_pred HHHHHHHHHHHHHHHhhc----CcEEEEeecCcEeCCc-cccccccchhhHHhhhhccccccccCCccCHH
Confidence 999999999999999877 9999999999999999 32221221 11111 23456899988753
|
|
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-23 Score=192.45 Aligned_cols=145 Identities=21% Similarity=0.280 Sum_probs=117.7
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
+++.| ++..++||++|.+++.++.+.+++++|.+||||||||+....++.+++ +++++++
T Consensus 82 ~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~------------------ 142 (300)
T KOG1201|consen 82 IRKIG-EAKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTF------------------ 142 (300)
T ss_pred HHhcC-ceeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHH------------------
Confidence 34444 899999999999999999999999999999999999999887776665 6666655
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++|+.
T Consensus 143 ---------------------------------------------------------------------------~vN~~ 147 (300)
T KOG1201|consen 143 ---------------------------------------------------------------------------DVNTI 147 (300)
T ss_pred ---------------------------------------------------------------------------HHhhH
Confidence 55555
Q ss_pred cHHHHHHHHhhccc--CCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchh
Q psy2266 163 ALVTVCHILFPLLR--PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYS 240 (313)
Q Consensus 163 g~~~~~~~~~p~l~--~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 240 (313)
|+++.+++|+|.|. ++|.||+|+|.+|.. +..+...|+
T Consensus 148 ~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~----------------------------------------g~~gl~~Yc 187 (300)
T KOG1201|consen 148 AHFWTTKAFLPKMLENNNGHIVTIASVAGLF----------------------------------------GPAGLADYC 187 (300)
T ss_pred HHHHHHHHHhHHHHhcCCceEEEehhhhccc----------------------------------------CCccchhhh
Confidence 55555555666553 358999999999977 234455699
Q ss_pred hhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 241 VSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 241 ~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+||+|+.++.++|..|+... .+.||+...|+|++++|.|...
T Consensus 188 aSK~a~vGfhesL~~EL~~~-~~~~IktTlv~P~~i~Tgmf~~ 229 (300)
T KOG1201|consen 188 ASKFAAVGFHESLSMELRAL-GKDGIKTTLVCPYFINTGMFDG 229 (300)
T ss_pred hhHHHHHHHHHHHHHHHHhc-CCCCeeEEEEeeeeccccccCC
Confidence 99999999999999999754 4558999999999999999874
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-23 Score=192.76 Aligned_cols=144 Identities=23% Similarity=0.314 Sum_probs=122.5
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
.++.+.++.++.||+++.++++++.+.+.+.++.||+||||||+...+++.+++ ++.++++++|+.+++.|++++.|.|
T Consensus 51 ~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m 130 (265)
T COG0300 51 EDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGM 130 (265)
T ss_pred HHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678899999999999999999999999999999999999999988888887 8888888888888888888888777
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
.+
T Consensus 131 ~~------------------------------------------------------------------------------ 132 (265)
T COG0300 131 VE------------------------------------------------------------------------------ 132 (265)
T ss_pred Hh------------------------------------------------------------------------------
Confidence 55
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
+++|.||||+|.+|..+. +....|++|
T Consensus 133 -------------~~~G~IiNI~S~ag~~p~----------------------------------------p~~avY~AT 159 (265)
T COG0300 133 -------------RGAGHIINIGSAAGLIPT----------------------------------------PYMAVYSAT 159 (265)
T ss_pred -------------cCCceEEEEechhhcCCC----------------------------------------cchHHHHHH
Confidence 234778888888877632 223459999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
|+++.+|++.|+.||... ||+|.+|+||+|.|++.+
T Consensus 160 Ka~v~~fSeaL~~EL~~~----gV~V~~v~PG~~~T~f~~ 195 (265)
T COG0300 160 KAFVLSFSEALREELKGT----GVKVTAVCPGPTRTEFFD 195 (265)
T ss_pred HHHHHHHHHHHHHHhcCC----CeEEEEEecCcccccccc
Confidence 999999999999998765 999999999999999985
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-23 Score=189.06 Aligned_cols=166 Identities=24% Similarity=0.285 Sum_probs=120.9
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.+++||++|+++++++++.+.+++|++|+||||||+.......+.+ ++|++++++|+.+++.+++++.|.|+++
T Consensus 56 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (260)
T PRK07063 56 AGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER 135 (260)
T ss_pred CCceEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh
Confidence 356788899999999999999999999999999999999987655444444 7777777777777777777666665431
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 136 -------------------------------------------------------------------------------- 135 (260)
T PRK07063 136 -------------------------------------------------------------------------------- 135 (260)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+.|+||++||..+... ..+..+|++||+|
T Consensus 136 -----------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sKaa 164 (260)
T PRK07063 136 -----------GRGSIVNIASTHAFKI----------------------------------------IPGCFPYPVAKHG 164 (260)
T ss_pred -----------CCeEEEEECChhhccC----------------------------------------CCCchHHHHHHHH
Confidence 1256666666655431 1233469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCC--Ccc-hhhhhhhhhhcccCCcc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVL--TPE-QGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~-~~~~~~~~~~l~r~~~~ 307 (313)
+..++|.++.++++. ||+||+|+||+|+|++.+..... .++ .........|++|+++.
T Consensus 165 ~~~~~~~la~el~~~----gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 225 (260)
T PRK07063 165 LLGLTRALGIEYAAR----NVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRP 225 (260)
T ss_pred HHHHHHHHHHHhCcc----CeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCH
Confidence 999999999888765 99999999999999997643111 111 11223345678887654
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.7e-23 Score=187.84 Aligned_cols=167 Identities=22% Similarity=0.287 Sum_probs=120.9
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++..+++|++|+++++++++.+.+++|+||+||||||+....+..+.+ ++|++++++|+.+++.++|++.+.|++
T Consensus 55 ~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 134 (254)
T PRK06114 55 AAGRRAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLE 134 (254)
T ss_pred hcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHh
Confidence 3466788899999999999999999999999999999999987655554444 666766666666666666665555432
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 135 -------------------------------------------------------------------------------- 134 (254)
T PRK06114 135 -------------------------------------------------------------------------------- 134 (254)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+++|+||++||..+.... .+....+|+++|+
T Consensus 135 -----------~~~~~iv~isS~~~~~~~--------------------------------------~~~~~~~Y~~sKa 165 (254)
T PRK06114 135 -----------NGGGSIVNIASMSGIIVN--------------------------------------RGLLQAHYNASKA 165 (254)
T ss_pred -----------cCCcEEEEECchhhcCCC--------------------------------------CCCCcchHHHHHH
Confidence 123677777777664311 1112356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+..+++.++.++.+. ||+||+|+||+|+|++.... ...+..+......|++|.++.
T Consensus 166 a~~~l~~~la~e~~~~----gi~v~~v~PG~i~t~~~~~~--~~~~~~~~~~~~~p~~r~~~~ 222 (254)
T PRK06114 166 GVIHLSKSLAMEWVGR----GIRVNSISPGYTATPMNTRP--EMVHQTKLFEEQTPMQRMAKV 222 (254)
T ss_pred HHHHHHHHHHHHHhhc----CeEEEEEeecCccCcccccc--cchHHHHHHHhcCCCCCCcCH
Confidence 9999999999988766 99999999999999986532 111222333455688887754
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.6e-23 Score=194.41 Aligned_cols=145 Identities=19% Similarity=0.263 Sum_probs=106.3
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECC-CCCC----CCCCCChh-HHHHHHHhHHHHHHHHHHHHHH
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNA-GIYR----DTAPGSFG-QRAETTLATNFFALVTVCHILF 79 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNA-Gi~~----~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~ 79 (313)
+.+.++.+++||++|+++++++++.+.++||+||+||||| |+.. ..++.+.+ ++|++++++|+.+++.++|++.
T Consensus 64 ~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l 143 (305)
T PRK08303 64 AAGGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFAL 143 (305)
T ss_pred hcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3466788899999999999999999999999999999999 8532 12344443 6677777666666666666666
Q ss_pred hcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhc
Q psy2266 80 PLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLAT 159 (313)
Q Consensus 80 ~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~ 159 (313)
|.|++.
T Consensus 144 p~m~~~-------------------------------------------------------------------------- 149 (305)
T PRK08303 144 PLLIRR-------------------------------------------------------------------------- 149 (305)
T ss_pred HHhhhC--------------------------------------------------------------------------
Confidence 655331
Q ss_pred ccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCch
Q psy2266 160 NFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSY 239 (313)
Q Consensus 160 N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 239 (313)
++|+||++||..+..... ......+|
T Consensus 150 -----------------~~g~IV~isS~~~~~~~~-------------------------------------~~~~~~~Y 175 (305)
T PRK08303 150 -----------------PGGLVVEITDGTAEYNAT-------------------------------------HYRLSVFY 175 (305)
T ss_pred -----------------CCcEEEEECCccccccCc-------------------------------------CCCCcchh
Confidence 125666666654422100 01123469
Q ss_pred hhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 240 SVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 240 ~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
++||+|+.+|+|.++.++++. ||+||+|+||+|+|+|..
T Consensus 176 ~asKaal~~lt~~La~el~~~----gIrVn~v~PG~v~T~~~~ 214 (305)
T PRK08303 176 DLAKTSVNRLAFSLAHELAPH----GATAVALTPGWLRSEMML 214 (305)
T ss_pred HHHHHHHHHHHHHHHHHhhhc----CcEEEEecCCccccHHHH
Confidence 999999999999999998866 999999999999999854
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.2e-23 Score=187.04 Aligned_cols=165 Identities=17% Similarity=0.145 Sum_probs=116.1
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC------CCCCChh-HHHHHHHhHHHHHHHHHHHHHH
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD------TAPGSFG-QRAETTLATNFFALVTVCHILF 79 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~------~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~ 79 (313)
.+.++.+++||++|.++++++++.+.+++|++|+||||||+... .++.+.+ ++|++.+++|+.+++.+++++.
T Consensus 57 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 136 (260)
T PRK08416 57 YGIKAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAA 136 (260)
T ss_pred cCCceEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 36678999999999999999999999999999999999997542 2222333 5566666666555555555555
Q ss_pred hcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhc
Q psy2266 80 PLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLAT 159 (313)
Q Consensus 80 ~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~ 159 (313)
|.|++
T Consensus 137 ~~~~~--------------------------------------------------------------------------- 141 (260)
T PRK08416 137 KRMEK--------------------------------------------------------------------------- 141 (260)
T ss_pred Hhhhc---------------------------------------------------------------------------
Confidence 54433
Q ss_pred ccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCch
Q psy2266 160 NFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSY 239 (313)
Q Consensus 160 N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 239 (313)
+++|+||++||..+..+ .....+|
T Consensus 142 ----------------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y 165 (260)
T PRK08416 142 ----------------VGGGSIISLSSTGNLVY----------------------------------------IENYAGH 165 (260)
T ss_pred ----------------cCCEEEEEEeccccccC----------------------------------------CCCcccc
Confidence 11367777777665431 2233569
Q ss_pred hhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 240 SVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 240 ~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
++||+|+..+++.++.++.+. ||+||+|+||+++|++.+... ..++..+......|++|++..
T Consensus 166 ~asK~a~~~~~~~la~el~~~----gi~v~~v~PG~i~T~~~~~~~-~~~~~~~~~~~~~~~~r~~~p 228 (260)
T PRK08416 166 GTSKAAVETMVKYAATELGEK----NIRVNAVSGGPIDTDALKAFT-NYEEVKAKTEELSPLNRMGQP 228 (260)
T ss_pred hhhHHHHHHHHHHHHHHhhhh----CeEEEEEeeCcccChhhhhcc-CCHHHHHHHHhcCCCCCCCCH
Confidence 999999999999999988765 999999999999999866531 111222233344577776543
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=186.81 Aligned_cols=142 Identities=21% Similarity=0.347 Sum_probs=110.3
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+.+.++..++||++++++++++++.+.+++|+||+||||||+... ..+.+.+ +.|++++++|+.+++.+++++.|.|+
T Consensus 51 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 130 (272)
T PRK08589 51 SNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMM 130 (272)
T ss_pred hcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 446678999999999999999999999999999999999998753 3444444 67777777777777666666666553
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 131 ~------------------------------------------------------------------------------- 131 (272)
T PRK08589 131 E------------------------------------------------------------------------------- 131 (272)
T ss_pred H-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++|+||++||..+... .....+|++||
T Consensus 132 -------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 158 (272)
T PRK08589 132 -------------QGGSIINTSSFSGQAA----------------------------------------DLYRSGYNAAK 158 (272)
T ss_pred -------------cCCEEEEeCchhhcCC----------------------------------------CCCCchHHHHH
Confidence 1256666666655431 12335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+|+..|++.++.++.++ ||+||+|+||+|+|++.+.
T Consensus 159 aal~~l~~~la~e~~~~----gI~v~~v~PG~v~T~~~~~ 194 (272)
T PRK08589 159 GAVINFTKSIAIEYGRD----GIRANAIAPGTIETPLVDK 194 (272)
T ss_pred HHHHHHHHHHHHHhhhc----CeEEEEEecCcccCchhhh
Confidence 99999999999998766 9999999999999998765
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=184.62 Aligned_cols=167 Identities=21% Similarity=0.239 Sum_probs=121.7
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++..+++|++|.++++++++.+.+++|++|++|||||+.....+.+.+ ++|++++++|+.+++.+++++.+.|++
T Consensus 54 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 133 (253)
T PRK08993 54 ALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIA 133 (253)
T ss_pred hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 3456788899999999999999999999999999999999987655555554 777777777777777777776665533
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 134 ~------------------------------------------------------------------------------- 134 (253)
T PRK08993 134 Q------------------------------------------------------------------------------- 134 (253)
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.++|+||++||..+... .....+|++||+
T Consensus 135 -----------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sKa 163 (253)
T PRK08993 135 -----------GNGGKIINIASMLSFQG----------------------------------------GIRVPSYTASKS 163 (253)
T ss_pred -----------CCCeEEEEECchhhccC----------------------------------------CCCCcchHHHHH
Confidence 01256666666655431 122346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+..+++.++.++.+. ||+||+|+||+++|++...... ............|++|++..
T Consensus 164 a~~~~~~~la~e~~~~----gi~v~~v~pG~v~T~~~~~~~~-~~~~~~~~~~~~p~~r~~~p 221 (253)
T PRK08993 164 GVMGVTRLMANEWAKH----NINVNAIAPGYMATNNTQQLRA-DEQRSAEILDRIPAGRWGLP 221 (253)
T ss_pred HHHHHHHHHHHHhhhh----CeEEEEEeeCcccCcchhhhcc-chHHHHHHHhcCCCCCCcCH
Confidence 9999999999988766 9999999999999998764311 11111233345677776543
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=184.36 Aligned_cols=165 Identities=23% Similarity=0.268 Sum_probs=123.9
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
..+.++..+.+|++|+++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.+++++.+.|++
T Consensus 55 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 134 (253)
T PRK05867 55 TSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVK 134 (253)
T ss_pred hcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHh
Confidence 3456788899999999999999999999999999999999997766665665 999999999999999988888887744
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.+
T Consensus 135 ~~------------------------------------------------------------------------------ 136 (253)
T PRK05867 135 QG------------------------------------------------------------------------------ 136 (253)
T ss_pred cC------------------------------------------------------------------------------
Confidence 10
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
++|+|+++||..+.... ......+|++||+
T Consensus 137 ------------~~g~iv~~sS~~~~~~~--------------------------------------~~~~~~~Y~asKa 166 (253)
T PRK05867 137 ------------QGGVIINTASMSGHIIN--------------------------------------VPQQVSHYCASKA 166 (253)
T ss_pred ------------CCcEEEEECcHHhcCCC--------------------------------------CCCCccchHHHHH
Confidence 12455566555543210 0112246999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
|+..+++.+++++++. ||+||+|+||+|+|++.+.. ++..+......|++|+++
T Consensus 167 al~~~~~~la~e~~~~----gI~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~r~~~ 220 (253)
T PRK05867 167 AVIHLTKAMAVELAPH----KIRVNSVSPGYILTELVEPY----TEYQPLWEPKIPLGRLGR 220 (253)
T ss_pred HHHHHHHHHHHHHhHh----CeEEEEeecCCCCCcccccc----hHHHHHHHhcCCCCCCcC
Confidence 9999999999998766 99999999999999986542 122222233456677654
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=187.81 Aligned_cols=80 Identities=20% Similarity=0.271 Sum_probs=55.1
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
.+.++.+++||++|+++++++++.+ +++|++|+||||||+... .++|++++++|+.+++.+++++.|.|++++
T Consensus 47 ~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id~li~nAG~~~~------~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g 119 (275)
T PRK06940 47 AGFDVSTQEVDVSSRESVKALAATA-QTLGPVTGLVHTAGVSPS------QASPEAILKVDLYGTALVLEEFGKVIAPGG 119 (275)
T ss_pred cCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCCEEEECCCcCCc------hhhHHHHHHHhhHHHHHHHHHHHHHHhhCC
Confidence 3557788899999999999999887 468899999999997531 245666666666666666666555554433
Q ss_pred eEEEEec
Q psy2266 87 RVVNVAS 93 (313)
Q Consensus 87 ~IV~isS 93 (313)
++|+++|
T Consensus 120 ~iv~isS 126 (275)
T PRK06940 120 AGVVIAS 126 (275)
T ss_pred CEEEEEe
Confidence 3343333
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.8e-22 Score=182.36 Aligned_cols=145 Identities=21% Similarity=0.212 Sum_probs=112.2
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+.+.++.++.||+++.++++++++.+.+++|++|+||||||+... .++.+.+ ++|++++++|+.+++.+++++.|.|+
T Consensus 52 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~ 131 (254)
T PRK07478 52 AEGGEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAML 131 (254)
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 446678899999999999999999999999999999999998643 3444444 77788887777777777777666654
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 132 ~~------------------------------------------------------------------------------ 133 (254)
T PRK07478 132 AR------------------------------------------------------------------------------ 133 (254)
T ss_pred hc------------------------------------------------------------------------------
Confidence 31
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+.++||++||..+... +..+..+|++||
T Consensus 134 -------------~~~~iv~~sS~~~~~~---------------------------------------~~~~~~~Y~~sK 161 (254)
T PRK07478 134 -------------GGGSLIFTSTFVGHTA---------------------------------------GFPGMAAYAASK 161 (254)
T ss_pred -------------CCceEEEEechHhhcc---------------------------------------CCCCcchhHHHH
Confidence 1256666666655321 122335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
+|+..+++.++.++.++ ||+||+|+||+|+|++.+..
T Consensus 162 ~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~ 198 (254)
T PRK07478 162 AGLIGLTQVLAAEYGAQ----GIRVNALLPGGTDTPMGRAM 198 (254)
T ss_pred HHHHHHHHHHHHHHhhc----CEEEEEEeeCcccCcccccc
Confidence 99999999999988766 99999999999999987653
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.8e-22 Score=180.63 Aligned_cols=140 Identities=21% Similarity=0.300 Sum_probs=109.8
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHH----cC--CCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHH
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQ----HG--GLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILF 79 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~----~g--~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~ 79 (313)
.+.++..+.+|+++.++++.+++.+.+. +| ++|+||||||+.....+.+.+ ++|++++++|+.+++.+++++.
T Consensus 52 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~ 131 (252)
T PRK12747 52 NGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQAL 131 (252)
T ss_pred cCCceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4566788999999999999999988653 44 899999999987655566655 8899999888888888888777
Q ss_pred hcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhc
Q psy2266 80 PLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLAT 159 (313)
Q Consensus 80 ~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~ 159 (313)
|.|++.|
T Consensus 132 ~~~~~~g------------------------------------------------------------------------- 138 (252)
T PRK12747 132 SRLRDNS------------------------------------------------------------------------- 138 (252)
T ss_pred HHhhcCC-------------------------------------------------------------------------
Confidence 7665544
Q ss_pred ccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCch
Q psy2266 160 NFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSY 239 (313)
Q Consensus 160 N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 239 (313)
+||++||.++... ..+..+|
T Consensus 139 --------------------~iv~isS~~~~~~----------------------------------------~~~~~~Y 158 (252)
T PRK12747 139 --------------------RIINISSAATRIS----------------------------------------LPDFIAY 158 (252)
T ss_pred --------------------eEEEECCcccccC----------------------------------------CCCchhH
Confidence 4555555544331 1223469
Q ss_pred hhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 240 SVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 240 ~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++||+|+.++++.++.++.+. ||+||+|+||+|+|++.+.
T Consensus 159 ~~sKaa~~~~~~~la~e~~~~----girvn~v~Pg~v~t~~~~~ 198 (252)
T PRK12747 159 SMTKGAINTMTFTLAKQLGAR----GITVNAILPGFIKTDMNAE 198 (252)
T ss_pred HHHHHHHHHHHHHHHHHHhHc----CCEEEEEecCCccCchhhh
Confidence 999999999999999998766 9999999999999999764
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.8e-22 Score=187.93 Aligned_cols=73 Identities=14% Similarity=0.269 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHcCCCcEEEECCCCCC--CCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEecc
Q psy2266 22 SSIHKLHDDIQTQHGGLDLLVNNAGIYR--DTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNVASK 94 (313)
Q Consensus 22 ~~v~~~~~~v~~~~g~iDilVnNAGi~~--~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS~ 94 (313)
++++++++.+.++||+||+||||||+.. ..++.+++ ++|++++++|+.+++.++|+++|.|+++|+||+++|.
T Consensus 104 ~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~ 179 (299)
T PRK06300 104 YTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYL 179 (299)
T ss_pred HHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeeh
Confidence 4689999999999999999999999764 34666666 9999999999999988888888877665555555543
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.6e-22 Score=185.30 Aligned_cols=164 Identities=23% Similarity=0.279 Sum_probs=122.4
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
++.+.++.++.||++|.++++++++.+.+.+|++|+||||||+... ..+.+++ ++|++.+++|+.+++.+++++.|.|
T Consensus 102 ~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 181 (300)
T PRK06128 102 QAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHL 181 (300)
T ss_pred HHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhc
Confidence 3456778899999999999999999999999999999999998643 3555655 8999999888888888777777766
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
+++++
T Consensus 182 ~~~~~--------------------------------------------------------------------------- 186 (300)
T PRK06128 182 PPGAS--------------------------------------------------------------------------- 186 (300)
T ss_pred CcCCE---------------------------------------------------------------------------
Confidence 55444
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
||++||..+... ..+...|++|
T Consensus 187 ------------------iv~~sS~~~~~~----------------------------------------~~~~~~Y~as 208 (300)
T PRK06128 187 ------------------IINTGSIQSYQP----------------------------------------SPTLLDYAST 208 (300)
T ss_pred ------------------EEEECCccccCC----------------------------------------CCCchhHHHH
Confidence 445555444321 1223469999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
|+|+..|++.+++++.+. ||+||+|+||+|+|++.... ...++..+......|++|.+.
T Consensus 209 K~a~~~~~~~la~el~~~----gI~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~~p~~r~~~ 267 (300)
T PRK06128 209 KAAIVAFTKALAKQVAEK----GIRVNAVAPGPVWTPLQPSG-GQPPEKIPDFGSETPMKRPGQ 267 (300)
T ss_pred HHHHHHHHHHHHHHhhhc----CcEEEEEEECcCcCCCcccC-CCCHHHHHHHhcCCCCCCCcC
Confidence 999999999999888766 99999999999999986532 112233333334567777664
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.6e-22 Score=181.47 Aligned_cols=139 Identities=23% Similarity=0.329 Sum_probs=110.4
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.++.++.+|++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.|.|++.
T Consensus 59 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-- 136 (265)
T PRK07062 59 ARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-- 136 (265)
T ss_pred ceEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc--
Confidence 4678899999999999999999999999999999999997666665555 6777777777777776666666655431
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 137 -------------------------------------------------------------------------------- 136 (265)
T PRK07062 137 -------------------------------------------------------------------------------- 136 (265)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
+.|+|+++||..+... ......|+++|+|+.
T Consensus 137 ---------~~g~iv~isS~~~~~~----------------------------------------~~~~~~y~asKaal~ 167 (265)
T PRK07062 137 ---------AAASIVCVNSLLALQP----------------------------------------EPHMVATSAARAGLL 167 (265)
T ss_pred ---------CCcEEEEeccccccCC----------------------------------------CCCchHhHHHHHHHH
Confidence 1267777777766541 123356999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
.+++.++.++.++ ||+||+|+||+|+|++..
T Consensus 168 ~~~~~la~e~~~~----gi~v~~i~PG~v~t~~~~ 198 (265)
T PRK07062 168 NLVKSLATELAPK----GVRVNSILLGLVESGQWR 198 (265)
T ss_pred HHHHHHHHHhhhc----CeEEEEEecCccccchhh
Confidence 9999999988766 999999999999999854
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.6e-22 Score=180.92 Aligned_cols=142 Identities=25% Similarity=0.321 Sum_probs=109.6
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
+.+.++.+++||++|++++.++++.+.+.+|++|+||||||+......+...++|++.+++|+.+++.+++++.+.|+
T Consensus 49 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-- 126 (261)
T PRK08265 49 SLGERARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-- 126 (261)
T ss_pred HhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh--
Confidence 345678899999999999999999999999999999999998654443333377777777777777776666666552
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 127 -------------------------------------------------------------------------------- 126 (261)
T PRK08265 127 -------------------------------------------------------------------------------- 126 (261)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+++|+||++||..+... ..+...|+++|++
T Consensus 127 ----------~~~g~ii~isS~~~~~~----------------------------------------~~~~~~Y~asKaa 156 (261)
T PRK08265 127 ----------RGGGAIVNFTSISAKFA----------------------------------------QTGRWLYPASKAA 156 (261)
T ss_pred ----------cCCcEEEEECchhhccC----------------------------------------CCCCchhHHHHHH
Confidence 22356666666655431 2233469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.++.++.+. ||+||+|+||+++|++.+.
T Consensus 157 ~~~~~~~la~e~~~~----gi~vn~v~PG~~~t~~~~~ 190 (261)
T PRK08265 157 IRQLTRSMAMDLAPD----GIRVNSVSPGWTWSRVMDE 190 (261)
T ss_pred HHHHHHHHHHHhccc----CEEEEEEccCCccChhhhh
Confidence 999999999888765 9999999999999998765
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.6e-22 Score=184.37 Aligned_cols=164 Identities=21% Similarity=0.192 Sum_probs=121.9
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+.+.++.++.||++|.++++++++.+.+++|++|++|||||+... ..+.+++ ++|++++++|+.+++.+++++.|.|+
T Consensus 97 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 176 (294)
T PRK07985 97 ECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLP 176 (294)
T ss_pred HcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 346678889999999999999999999999999999999998542 3455555 89999998888888888888777665
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
++++||
T Consensus 177 ~~g~iv-------------------------------------------------------------------------- 182 (294)
T PRK07985 177 KGASII-------------------------------------------------------------------------- 182 (294)
T ss_pred cCCEEE--------------------------------------------------------------------------
Confidence 544555
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++||..+... .....+|++||
T Consensus 183 -------------------~iSS~~~~~~----------------------------------------~~~~~~Y~asK 203 (294)
T PRK07985 183 -------------------TTSSIQAYQP----------------------------------------SPHLLDYAATK 203 (294)
T ss_pred -------------------EECCchhccC----------------------------------------CCCcchhHHHH
Confidence 4444444321 12234699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+|+..+++.++.+++++ ||+||+|+||+|+|++.... ...++..+......|++|.++.
T Consensus 204 aal~~l~~~la~el~~~----gIrvn~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~r~~~p 262 (294)
T PRK07985 204 AAILNYSRGLAKQVAEK----GIRVNIVAPGPIWTALQISG-GQTQDKIPQFGQQTPMKRAGQP 262 (294)
T ss_pred HHHHHHHHHHHHHHhHh----CcEEEEEECCcCcccccccc-CCCHHHHHHHhccCCCCCCCCH
Confidence 99999999999998766 99999999999999985431 1122222333445677776643
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-22 Score=185.48 Aligned_cols=147 Identities=27% Similarity=0.356 Sum_probs=118.1
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
..+.++.++.||++|+++++++++.+.+++|+||+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|++
T Consensus 61 ~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 140 (286)
T PRK07791 61 AAGGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRA 140 (286)
T ss_pred hcCCceEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 3466788899999999999999999999999999999999998766666665 888988888888888888888887754
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
...
T Consensus 141 ~~~----------------------------------------------------------------------------- 143 (286)
T PRK07791 141 ESK----------------------------------------------------------------------------- 143 (286)
T ss_pred hcc-----------------------------------------------------------------------------
Confidence 100
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+-....|+||++||.++... ..+..+|++||+
T Consensus 144 --------~~~~~~g~Iv~isS~~~~~~----------------------------------------~~~~~~Y~asKa 175 (286)
T PRK07791 144 --------AGRAVDARIINTSSGAGLQG----------------------------------------SVGQGNYSAAKA 175 (286)
T ss_pred --------cCCCCCcEEEEeCchhhCcC----------------------------------------CCCchhhHHHHH
Confidence 00011378888888887551 233456999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
|+..|++.++.+++++ ||+||+|+|| +.|+|..
T Consensus 176 al~~l~~~la~el~~~----gIrVn~v~Pg-~~T~~~~ 208 (286)
T PRK07791 176 GIAALTLVAAAELGRY----GVTVNAIAPA-ARTRMTE 208 (286)
T ss_pred HHHHHHHHHHHHHHHh----CeEEEEECCC-CCCCcch
Confidence 9999999999998876 9999999999 8999854
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.3e-22 Score=180.17 Aligned_cols=142 Identities=20% Similarity=0.216 Sum_probs=111.9
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.|.++.+++||++|.++++++++.+.+++|++|++|||||+....++.+.+ ++|++++++|+.+++.+++++.|.|+
T Consensus 64 ~~~g~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 143 (256)
T PRK12859 64 LKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFD 143 (256)
T ss_pred HhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 44567888999999999999999999999999999999999987656666655 77777777777777777776666554
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 144 ~------------------------------------------------------------------------------- 144 (256)
T PRK12859 144 K------------------------------------------------------------------------------- 144 (256)
T ss_pred h-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+++|+||++||..+.. +..+..+|++||
T Consensus 145 ------------~~~g~iv~isS~~~~~----------------------------------------~~~~~~~Y~~sK 172 (256)
T PRK12859 145 ------------KSGGRIINMTSGQFQG----------------------------------------PMVGELAYAATK 172 (256)
T ss_pred ------------cCCeEEEEEcccccCC----------------------------------------CCCCchHHHHHH
Confidence 1135666776666543 122345799999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
+|+..|++.++.++... ||+||+|+||+++|++.
T Consensus 173 ~a~~~l~~~la~~~~~~----~i~v~~v~PG~i~t~~~ 206 (256)
T PRK12859 173 GAIDALTSSLAAEVAHL----GITVNAINPGPTDTGWM 206 (256)
T ss_pred HHHHHHHHHHHHHhhhh----CeEEEEEEEccccCCCC
Confidence 99999999988888765 99999999999999863
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=178.07 Aligned_cols=155 Identities=19% Similarity=0.222 Sum_probs=111.8
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.+++||++|.++++++++.+.+.+|++|++|||||+.......+.+ +.+.+++++|+.+.+.+++++.|.|++.
T Consensus 50 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--- 126 (246)
T PRK05599 50 SVHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQ--- 126 (246)
T ss_pred ceEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhc---
Confidence 478899999999999999999999999999999999986544333333 4555556555555555555544444220
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 127 -------------------------------------------------------------------------------- 126 (246)
T PRK05599 127 -------------------------------------------------------------------------------- 126 (246)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
.++|+||++||.++... ..+..+|++||+|+.+
T Consensus 127 -------~~~g~Iv~isS~~~~~~----------------------------------------~~~~~~Y~asKaa~~~ 159 (246)
T PRK05599 127 -------TAPAAIVAFSSIAGWRA----------------------------------------RRANYVYGSTKAGLDA 159 (246)
T ss_pred -------CCCCEEEEEeccccccC----------------------------------------CcCCcchhhHHHHHHH
Confidence 01367888888777541 2234579999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccccC----CCCcchhhhhhhh
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG----VLTPEQGKIRQKI 298 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~~~~ 298 (313)
|++.++.++.+. ||+||+|+||+|+|++..... ..+|++.+.....
T Consensus 160 ~~~~la~el~~~----~I~v~~v~PG~v~T~~~~~~~~~~~~~~pe~~a~~~~~ 209 (246)
T PRK05599 160 FCQGLADSLHGS----HVRLIIARPGFVIGSMTTGMKPAPMSVYPRDVAAAVVS 209 (246)
T ss_pred HHHHHHHHhcCC----CceEEEecCCcccchhhcCCCCCCCCCCHHHHHHHHHH
Confidence 999999988765 999999999999999865431 1355665555433
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.8e-22 Score=179.94 Aligned_cols=164 Identities=20% Similarity=0.117 Sum_probs=115.0
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD--TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~--~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
++.+++||++|.++++++++.+.+++|++|+||||||+... ..+.+.+ ++|.+.+++|+.+++.+++++++.|.+.
T Consensus 49 ~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~- 127 (259)
T PRK08340 49 EVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEK- 127 (259)
T ss_pred CceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhc-
Confidence 67889999999999999999999999999999999998542 2344443 6666666666666655555555543210
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 128 -------------------------------------------------------------------------------- 127 (259)
T PRK08340 128 -------------------------------------------------------------------------------- 127 (259)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+++|+||++||..+... ..+...|++||+|+
T Consensus 128 ---------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~y~~sKaa~ 158 (259)
T PRK08340 128 ---------KMKGVLVYLSSVSVKEP----------------------------------------MPPLVLADVTRAGL 158 (259)
T ss_pred ---------CCCCEEEEEeCcccCCC----------------------------------------CCCchHHHHHHHHH
Confidence 12367778877776431 22335699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccccC-------CCC-cch-hhhhhhhhhcccCCcc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG-------VLT-PEQ-GKIRQKIYLLKRTNKF 307 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~-------~~~-~~~-~~~~~~~~~l~r~~~~ 307 (313)
..++|.++.++.++ ||+||+|+||+++|++.+... ... ++. .+......|++|+++.
T Consensus 159 ~~~~~~la~e~~~~----gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 224 (259)
T PRK08340 159 VQLAKGVSRTYGGK----GIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRW 224 (259)
T ss_pred HHHHHHHHHHhCCC----CEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCH
Confidence 99999999888765 999999999999999865310 011 111 1223345688887754
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-21 Score=177.86 Aligned_cols=139 Identities=27% Similarity=0.365 Sum_probs=107.2
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
+.++.||++|+++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++++++|.|++
T Consensus 53 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~----- 127 (255)
T PRK06463 53 VFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKL----- 127 (255)
T ss_pred CeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh-----
Confidence 67889999999999999999999999999999999997655555444 677777777766666666666665542
Q ss_pred EEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHH
Q psy2266 90 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCH 169 (313)
Q Consensus 90 ~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 169 (313)
T Consensus 128 -------------------------------------------------------------------------------- 127 (255)
T PRK06463 128 -------------------------------------------------------------------------------- 127 (255)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHH
Q psy2266 170 ILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKL 249 (313)
Q Consensus 170 ~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l 249 (313)
+++|+||++||..+.... ..+..+|++||+|+..+
T Consensus 128 ------~~~g~iv~isS~~~~~~~---------------------------------------~~~~~~Y~asKaa~~~~ 162 (255)
T PRK06463 128 ------SKNGAIVNIASNAGIGTA---------------------------------------AEGTTFYAITKAGIIIL 162 (255)
T ss_pred ------cCCcEEEEEcCHHhCCCC---------------------------------------CCCccHhHHHHHHHHHH
Confidence 123667777776654211 12334699999999999
Q ss_pred HHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 250 SFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 250 ~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++.++.++.+. ||+||+|+||+|+|++...
T Consensus 163 ~~~la~e~~~~----~i~v~~i~Pg~v~t~~~~~ 192 (255)
T PRK06463 163 TRRLAFELGKY----GIRVNAVAPGWVETDMTLS 192 (255)
T ss_pred HHHHHHHhhhc----CeEEEEEeeCCCCCchhhc
Confidence 99998888765 9999999999999998754
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=179.03 Aligned_cols=138 Identities=22% Similarity=0.292 Sum_probs=109.4
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++..++||++|+++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.+++++.|.|++
T Consensus 45 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---- 120 (258)
T PRK06398 45 DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLK---- 120 (258)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH----
Confidence 467889999999999999999999999999999999997766666665 788888877777777777777776643
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 121 -------------------------------------------------------------------------------- 120 (258)
T PRK06398 121 -------------------------------------------------------------------------------- 120 (258)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
++.|+||++||..+.. +..+..+|++||+|+..
T Consensus 121 -------~~~g~iv~isS~~~~~----------------------------------------~~~~~~~Y~~sKaal~~ 153 (258)
T PRK06398 121 -------QDKGVIINIASVQSFA----------------------------------------VTRNAAAYVTSKHAVLG 153 (258)
T ss_pred -------cCCeEEEEeCcchhcc----------------------------------------CCCCCchhhhhHHHHHH
Confidence 1225666666665543 12334579999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+++.++.++.+ +|+||+|+||+|+|++...
T Consensus 154 ~~~~la~e~~~-----~i~vn~i~PG~v~T~~~~~ 183 (258)
T PRK06398 154 LTRSIAVDYAP-----TIRCVAVCPGSIRTPLLEW 183 (258)
T ss_pred HHHHHHHHhCC-----CCEEEEEecCCccchHHhh
Confidence 99998888752 4999999999999998654
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-21 Score=178.24 Aligned_cols=166 Identities=23% Similarity=0.296 Sum_probs=120.6
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.+++||+++.++++++++.+.+++|++|++|||||.....++.+.+ ++|++.+++|+.+++.++|++.+.|++
T Consensus 60 ~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 139 (258)
T PRK06935 60 KEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAK 139 (258)
T ss_pred hcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHh
Confidence 4466788999999999999999999999999999999999987655555544 677777777777776666666665543
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 140 ~------------------------------------------------------------------------------- 140 (258)
T PRK06935 140 Q------------------------------------------------------------------------------- 140 (258)
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+.|+|+++||..+... .....+|+++|+
T Consensus 141 ------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK~ 168 (258)
T PRK06935 141 ------------GSGKIINIASMLSFQG----------------------------------------GKFVPAYTASKH 168 (258)
T ss_pred ------------CCeEEEEECCHHhccC----------------------------------------CCCchhhHHHHH
Confidence 1256777777665431 223356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+..+++.+++++.+. ||+||+|+||+|+|++.+.... .+...+......|.+|++..
T Consensus 169 a~~~~~~~la~e~~~~----gi~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 226 (258)
T PRK06935 169 GVAGLTKAFANELAAY----NIQVNAIAPGYIKTANTAPIRA-DKNRNDEILKRIPAGRWGEP 226 (258)
T ss_pred HHHHHHHHHHHHhhhh----CeEEEEEEeccccccchhhccc-ChHHHHHHHhcCCCCCCCCH
Confidence 9999999999988765 9999999999999998654311 11122223344566666553
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=178.91 Aligned_cols=167 Identities=21% Similarity=0.186 Sum_probs=121.7
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++.+++||++|.++++++++.+.+++|++|+||||||+... .++.+++ +++
T Consensus 50 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~------------------------ 105 (263)
T PRK06200 50 FGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETL------------------------ 105 (263)
T ss_pred hCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHH------------------------
Confidence 45567889999999999999999999999999999999998643 2333332 221
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.+.|+.++++|+.|+
T Consensus 106 -----------------------------------------------------------------~~~~~~~~~~n~~~~ 120 (263)
T PRK06200 106 -----------------------------------------------------------------DTAFDEIFNVNVKGY 120 (263)
T ss_pred -----------------------------------------------------------------HHHHHHHeeeccHhH
Confidence 123566667777777
Q ss_pred HHHHHHHhhcccC-CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 165 VTVCHILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 165 ~~~~~~~~p~l~~-~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+.+++.++|.|++ +|+||++||..+... ..+..+|++||
T Consensus 121 ~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK 160 (263)
T PRK06200 121 LLGAKAALPALKASGGSMIFTLSNSSFYP----------------------------------------GGGGPLYTASK 160 (263)
T ss_pred HHHHHHHHHHHHhcCCEEEEECChhhcCC----------------------------------------CCCCchhHHHH
Confidence 7777777777754 578999999887541 22335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCC--------CCcchhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGV--------LTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~--------~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+|+..+++.+++++++ +|+||+|+||+|+|+|...... ..++..+......|++|.++.
T Consensus 161 ~a~~~~~~~la~el~~-----~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~ 227 (263)
T PRK06200 161 HAVVGLVRQLAYELAP-----KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQP 227 (263)
T ss_pred HHHHHHHHHHHHHHhc-----CcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCH
Confidence 9999999998888763 4999999999999998643210 112222334455688887654
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-21 Score=176.48 Aligned_cols=165 Identities=22% Similarity=0.229 Sum_probs=122.8
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++..+.||++|+++++++++.+.+++|++|++|||||+....++.+.+ ++|++++++|+.+++.+++++.+.|++
T Consensus 56 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~- 134 (254)
T PRK08085 56 EGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVK- 134 (254)
T ss_pred cCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-
Confidence 355678889999999999999999999999999999999987655555555 788888888888887777777766533
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 135 -------------------------------------------------------------------------------- 134 (254)
T PRK08085 135 -------------------------------------------------------------------------------- 134 (254)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
++.++||++||..+... ..+...|+++|++
T Consensus 135 ----------~~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a 164 (254)
T PRK08085 135 ----------RQAGKIINICSMQSELG----------------------------------------RDTITPYAASKGA 164 (254)
T ss_pred ----------cCCcEEEEEccchhccC----------------------------------------CCCCcchHHHHHH
Confidence 11256666666655331 1233469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+..+++.++.++++. ||+||+|+||+++|++.+.... .++..+......|++|+++.
T Consensus 165 ~~~~~~~la~e~~~~----gi~v~~v~pG~~~t~~~~~~~~-~~~~~~~~~~~~p~~~~~~~ 221 (254)
T PRK08085 165 VKMLTRGMCVELARH----NIQVNGIAPGYFKTEMTKALVE-DEAFTAWLCKRTPAARWGDP 221 (254)
T ss_pred HHHHHHHHHHHHHhh----CeEEEEEEeCCCCCcchhhhcc-CHHHHHHHHhcCCCCCCcCH
Confidence 999999999888766 9999999999999998765311 12222333445677777653
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.6e-21 Score=175.06 Aligned_cols=77 Identities=14% Similarity=0.144 Sum_probs=63.7
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
.+.++.+++||++|+++++++++.+.+++|++|+||||||.....++.+++ ++|++++++|+.+++.++|++.+.|.
T Consensus 48 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 125 (252)
T PRK07677 48 FPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWI 125 (252)
T ss_pred cCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 356788899999999999999999999999999999999986555555555 88888888888888887777777653
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.3e-21 Score=175.02 Aligned_cols=167 Identities=21% Similarity=0.239 Sum_probs=121.6
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
++.+.++..+.+|++|.++++++++.+.+++|++|++|||||+.... ++.+.+ ++|++++++|+.+++.+++++.|.|
T Consensus 52 ~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 131 (253)
T PRK06172 52 REAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLM 131 (253)
T ss_pred HhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34566788999999999999999999999999999999999986543 344444 7777777777777776666666655
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++
T Consensus 132 ~~------------------------------------------------------------------------------ 133 (253)
T PRK06172 132 LA------------------------------------------------------------------------------ 133 (253)
T ss_pred Hh------------------------------------------------------------------------------
Confidence 32
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
++.++|+++||..+... ..+...|++|
T Consensus 134 -------------~~~~~ii~~sS~~~~~~----------------------------------------~~~~~~Y~~s 160 (253)
T PRK06172 134 -------------QGGGAIVNTASVAGLGA----------------------------------------APKMSIYAAS 160 (253)
T ss_pred -------------cCCcEEEEECchhhccC----------------------------------------CCCCchhHHH
Confidence 12356777777666541 1233569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
|+|+..+++.++.++.+. ||+||+|+||+|+|++.+......+...+......|++|.+.
T Consensus 161 Kaa~~~~~~~la~e~~~~----~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (253)
T PRK06172 161 KHAVIGLTKSAAIEYAKK----GIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGK 220 (253)
T ss_pred HHHHHHHHHHHHHHhccc----CeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccC
Confidence 999999999998888765 999999999999999976542223333333444556666554
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.4e-21 Score=174.15 Aligned_cols=139 Identities=22% Similarity=0.128 Sum_probs=109.5
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcC-CCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHG-GLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g-~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
++.+.++..++||++++++++++++.+.+++| +||+||||||+... .++.+.+ ++|.+.+++|+.+++.++|++.|.
T Consensus 50 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (227)
T PRK08862 50 SALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAER 129 (227)
T ss_pred HhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34567788899999999999999999999999 99999999986543 3566665 788888888888877777777776
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++.
T Consensus 130 m~~~---------------------------------------------------------------------------- 133 (227)
T PRK08862 130 MRKR---------------------------------------------------------------------------- 133 (227)
T ss_pred HHhc----------------------------------------------------------------------------
Confidence 6431
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
.++|+||++||..+.. +...|++
T Consensus 134 --------------~~~g~Iv~isS~~~~~-------------------------------------------~~~~Y~a 156 (227)
T PRK08862 134 --------------NKKGVIVNVISHDDHQ-------------------------------------------DLTGVES 156 (227)
T ss_pred --------------CCCceEEEEecCCCCC-------------------------------------------CcchhHH
Confidence 0136677777654321 2246999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
||+|+.+|+|.++.++++. ||+||+|+||+++|+.
T Consensus 157 sKaal~~~~~~la~el~~~----~Irvn~v~PG~i~t~~ 191 (227)
T PRK08862 157 SNALVSGFTHSWAKELTPF----NIRVGGVVPSIFSANG 191 (227)
T ss_pred HHHHHHHHHHHHHHHHhhc----CcEEEEEecCcCcCCC
Confidence 9999999999999998765 9999999999999984
|
|
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.5e-21 Score=170.44 Aligned_cols=184 Identities=25% Similarity=0.309 Sum_probs=139.2
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHc--CCCcEEEECCCCCCCC-CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQH--GGLDLLVNNAGIYRDT-APGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~--g~iDilVnNAGi~~~~-~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
...+++.+++||++.+++.++++.+.+-. .++|+||||||+...- ...... +.|-+.+++|..+++.++|+++|++
T Consensus 52 ~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLL 131 (249)
T KOG1611|consen 52 SDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLL 131 (249)
T ss_pred cCCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHH
Confidence 46789999999999999999999999874 4899999999997543 334444 9999999999999999999999999
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++...-+- .++
T Consensus 132 kkaas~~~------------gd~--------------------------------------------------------- 142 (249)
T KOG1611|consen 132 KKAASKVS------------GDG--------------------------------------------------------- 142 (249)
T ss_pred HHHhhccc------------CCc---------------------------------------------------------
Confidence 77322100 000
Q ss_pred cHHHHHHHHhhcc-cCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 163 ALVTVCHILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 163 g~~~~~~~~~p~l-~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
| ..++.|||+||.++.... . ...+..+|..
T Consensus 143 ------------~s~~raaIinisS~~~s~~~---~----------------------------------~~~~~~AYrm 173 (249)
T KOG1611|consen 143 ------------LSVSRAAIINISSSAGSIGG---F----------------------------------RPGGLSAYRM 173 (249)
T ss_pred ------------ccccceeEEEeeccccccCC---C----------------------------------CCcchhhhHh
Confidence 0 123689999999886311 0 1234567999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhh----hcccCCcccccCC
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIY----LLKRTNKFQLDDF 312 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~----~l~r~~~~~~~~~ 312 (313)
||+|+++++|.++.+|.++ +|.|.++|||||+|+|.......++++........ --.-.|.|+..|.
T Consensus 174 SKaAlN~f~ksls~dL~~~----~ilv~sihPGwV~TDMgg~~a~ltveeSts~l~~~i~kL~~~hnG~ffn~dl 244 (249)
T KOG1611|consen 174 SKAALNMFAKSLSVDLKDD----HILVVSIHPGWVQTDMGGKKAALTVEESTSKLLASINKLKNEHNGGFFNRDG 244 (249)
T ss_pred hHHHHHHHHHHhhhhhcCC----cEEEEEecCCeEEcCCCCCCcccchhhhHHHHHHHHHhcCcccCcceEccCC
Confidence 9999999998888887766 99999999999999999887777777765543332 2234666666554
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4e-21 Score=177.17 Aligned_cols=165 Identities=18% Similarity=0.170 Sum_probs=117.0
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC---------------CCChhHHHHHHHhHHHHHH
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA---------------PGSFGQRAETTLATNFFAL 71 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~---------------~~~~~~~~~~~~~vNl~~~ 71 (313)
.+.++..++||++|++++.++++.+.+++|++|+||||||+..... +.+++
T Consensus 57 ~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 122 (278)
T PRK08277 57 AGGEALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLD-------------- 122 (278)
T ss_pred cCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCC--------------
Confidence 4567888999999999999999999999999999999999754321 12222
Q ss_pred HHHHHHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcch
Q psy2266 72 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQ 151 (313)
Q Consensus 72 i~l~ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~ 151 (313)
.+
T Consensus 123 ------------------------------------------------------------------------------~~ 124 (278)
T PRK08277 123 ------------------------------------------------------------------------------EE 124 (278)
T ss_pred ------------------------------------------------------------------------------HH
Confidence 13
Q ss_pred hhhhhhhcccccHHHHHHHHhhcccC--CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhccc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLLRP--HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKD 229 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l~~--~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (313)
+|+..+++|+.+++.++++++|.|++ .|+||++||..+..+
T Consensus 125 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~------------------------------------- 167 (278)
T PRK08277 125 GFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTP------------------------------------- 167 (278)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCC-------------------------------------
Confidence 45555555666666666666665533 377888888777541
Q ss_pred ccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCC----CCcchhhhhhhhhhcccCC
Q psy2266 230 KEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGV----LTPEQGKIRQKIYLLKRTN 305 (313)
Q Consensus 230 ~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~----~~~~~~~~~~~~~~l~r~~ 305 (313)
..+..+|++||+|+..++|.++.++.+. ||+||+|+||+|+|++.+.... ...+..+......|++|++
T Consensus 168 ---~~~~~~Y~~sK~a~~~l~~~la~e~~~~----girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 240 (278)
T PRK08277 168 ---LTKVPAYSAAKAAISNFTQWLAVHFAKV----GIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFG 240 (278)
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHhCcc----CeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCC
Confidence 2234569999999999999999888765 9999999999999998654311 1112223333456788876
Q ss_pred cc
Q psy2266 306 KF 307 (313)
Q Consensus 306 ~~ 307 (313)
+.
T Consensus 241 ~~ 242 (278)
T PRK08277 241 KP 242 (278)
T ss_pred CH
Confidence 53
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.3e-21 Score=175.70 Aligned_cols=167 Identities=19% Similarity=0.203 Sum_probs=119.6
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++..++||+++.++++++++.+.+++|++|+||||||+.... ++.+.+ +.+
T Consensus 49 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~------------------------ 104 (262)
T TIGR03325 49 HGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRI------------------------ 104 (262)
T ss_pred cCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhh------------------------
Confidence 355688899999999999999999999999999999999985422 222221 100
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.+.|+.++++|+.|+
T Consensus 105 -----------------------------------------------------------------~~~~~~~~~~N~~~~ 119 (262)
T TIGR03325 105 -----------------------------------------------------------------DEAFDEVFHINVKGY 119 (262)
T ss_pred -----------------------------------------------------------------hHHHHHhheeecHhH
Confidence 134666777777777
Q ss_pred HHHHHHHhhcccC-CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 165 VTVCHILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 165 ~~~~~~~~p~l~~-~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+.++++++|.|++ +|+||+++|..+... ..+...|++||
T Consensus 120 ~~l~~~~~~~~~~~~g~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK 159 (262)
T TIGR03325 120 LLAVKAALPALVASRGSVIFTISNAGFYP----------------------------------------NGGGPLYTAAK 159 (262)
T ss_pred HHHHHHHHHHHhhcCCCEEEEeccceecC----------------------------------------CCCCchhHHHH
Confidence 7777788887743 478999998877541 22335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCC-CCc------chhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGV-LTP------EQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~------~~~~~~~~~~~l~r~~~~ 307 (313)
+|+..|++.++.+++ ++ |+||+|+||+|+|+|...... ..+ ...+......|++|+++.
T Consensus 160 aa~~~l~~~la~e~~----~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 225 (262)
T TIGR03325 160 HAVVGLVKELAFELA----PY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDA 225 (262)
T ss_pred HHHHHHHHHHHHhhc----cC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCCh
Confidence 999999988888875 33 999999999999998653211 011 011223345788887754
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.6e-21 Score=174.26 Aligned_cols=162 Identities=20% Similarity=0.195 Sum_probs=121.3
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.++.++++|++++++++++++.+.+++|++|+||||||+.....+.+.+ ++|++++++|+.+++.+++++.|.|+..
T Consensus 69 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-- 146 (262)
T PRK07831 69 GRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRAR-- 146 (262)
T ss_pred ceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--
Confidence 3678899999999999999999999999999999999987655565555 7888888888888887777777766431
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 147 -------------------------------------------------------------------------------- 146 (262)
T PRK07831 147 -------------------------------------------------------------------------------- 146 (262)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
..+|+|++++|..+... ..+...|+++|+|+.
T Consensus 147 --------~~~g~iv~~ss~~~~~~----------------------------------------~~~~~~Y~~sKaal~ 178 (262)
T PRK07831 147 --------GHGGVIVNNASVLGWRA----------------------------------------QHGQAHYAAAKAGVM 178 (262)
T ss_pred --------CCCcEEEEeCchhhcCC----------------------------------------CCCCcchHHHHHHHH
Confidence 01356677776665431 123356999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
++++.++.++.++ ||+||+|+||+++|++.... ..++..+......|++|.++
T Consensus 179 ~~~~~la~e~~~~----gI~v~~i~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~r~~~ 231 (262)
T PRK07831 179 ALTRCSALEAAEY----GVRINAVAPSIAMHPFLAKV--TSAELLDELAAREAFGRAAE 231 (262)
T ss_pred HHHHHHHHHhCcc----CeEEEEEeeCCccCcccccc--cCHHHHHHHHhcCCCCCCcC
Confidence 9999999888766 99999999999999986542 12232233334456677654
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.5e-21 Score=172.88 Aligned_cols=144 Identities=26% Similarity=0.352 Sum_probs=110.3
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++..+.+|+++.++++++++.+.+.++++|++|||||+.....+.+.+ ++|++++++|+.+++.+++++.+.|++
T Consensus 49 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 128 (248)
T TIGR01832 49 ALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLK 128 (248)
T ss_pred hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 4466788999999999999999999999999999999999997655554444 677777777777776666666665532
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.+
T Consensus 129 ~~------------------------------------------------------------------------------ 130 (248)
T TIGR01832 129 QG------------------------------------------------------------------------------ 130 (248)
T ss_pred cC------------------------------------------------------------------------------
Confidence 10
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
..|+||++||..+... ......|++||+
T Consensus 131 ------------~~g~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sKa 158 (248)
T TIGR01832 131 ------------RGGKIINIASMLSFQG----------------------------------------GIRVPSYTASKH 158 (248)
T ss_pred ------------CCeEEEEEecHHhccC----------------------------------------CCCCchhHHHHH
Confidence 0256677776655431 123346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++++++++.+. ||+||+|+||+|+|++.+.
T Consensus 159 a~~~~~~~la~e~~~~----gi~v~~v~pg~v~t~~~~~ 193 (248)
T TIGR01832 159 GVAGLTKLLANEWAAK----GINVNAIAPGYMATNNTQA 193 (248)
T ss_pred HHHHHHHHHHHHhCcc----CcEEEEEEECcCcCcchhc
Confidence 9999999999988765 9999999999999998764
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-20 Score=171.96 Aligned_cols=164 Identities=20% Similarity=0.201 Sum_probs=116.9
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
+.+.++.++.||+++.++++++++.+.+.+|++|++|||||+....+.+...++|++.+++|+.+++.+++++.+.|++.
T Consensus 57 ~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (255)
T PRK06113 57 QLGGQAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN 136 (255)
T ss_pred hcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc
Confidence 34567888999999999999999999999999999999999876544432236677777666666666666655555321
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 137 -------------------------------------------------------------------------------- 136 (255)
T PRK06113 137 -------------------------------------------------------------------------------- 136 (255)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+.++||++||..+... ..+..+|++||+|
T Consensus 137 -----------~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a 165 (255)
T PRK06113 137 -----------GGGVILTITSMAAENK----------------------------------------NINMTSYASSKAA 165 (255)
T ss_pred -----------CCcEEEEEecccccCC----------------------------------------CCCcchhHHHHHH
Confidence 1256677777665431 2233569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
+..+++.++.++... ||+||+|+||+++|++.+.. ..++.........|++|.+.
T Consensus 166 ~~~~~~~la~~~~~~----~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~ 220 (255)
T PRK06113 166 ASHLVRNMAFDLGEK----NIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTPIRRLGQ 220 (255)
T ss_pred HHHHHHHHHHHhhhh----CeEEEEEecccccccccccc--cCHHHHHHHHhcCCCCCCcC
Confidence 999999998888765 99999999999999987653 23332233334445555443
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.7e-21 Score=173.61 Aligned_cols=143 Identities=21% Similarity=0.305 Sum_probs=112.8
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.+++||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.+++++.+.|++
T Consensus 56 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 135 (265)
T PRK07097 56 ELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIK 135 (265)
T ss_pred hcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 3466788999999999999999999999999999999999997766555554 777777777777777777766666543
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 136 -------------------------------------------------------------------------------- 135 (265)
T PRK07097 136 -------------------------------------------------------------------------------- 135 (265)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
++.|+||++||..+... ..+..+|+++|+
T Consensus 136 -----------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sKa 164 (265)
T PRK07097 136 -----------KGHGKIINICSMMSELG----------------------------------------RETVSAYAAAKG 164 (265)
T ss_pred -----------cCCcEEEEEcCccccCC----------------------------------------CCCCccHHHHHH
Confidence 11266777777665431 123356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.+++++.+. ||+||+|+||+|+|++...
T Consensus 165 al~~l~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 199 (265)
T PRK07097 165 GLKMLTKNIASEYGEA----NIQCNGIGPGYIATPQTAP 199 (265)
T ss_pred HHHHHHHHHHHHhhhc----CceEEEEEeccccccchhh
Confidence 9999999988888765 9999999999999998654
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.6e-21 Score=180.97 Aligned_cols=146 Identities=24% Similarity=0.331 Sum_probs=114.1
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
+++.|.++.++.+|++|.++++++++.+.+.+|+||++|||||+.....+.+++ ++|++++++|+.+++.+++++.|.|
T Consensus 51 ~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~ 130 (330)
T PRK06139 51 CRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIF 130 (330)
T ss_pred HHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 345677888999999999999999999999999999999999998776666665 7777777777777777666666655
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++.
T Consensus 131 ~~~----------------------------------------------------------------------------- 133 (330)
T PRK06139 131 KKQ----------------------------------------------------------------------------- 133 (330)
T ss_pred HHc-----------------------------------------------------------------------------
Confidence 431
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
+.|+||++||..+... .+...+|++|
T Consensus 134 --------------~~g~iV~isS~~~~~~----------------------------------------~p~~~~Y~as 159 (330)
T PRK06139 134 --------------GHGIFINMISLGGFAA----------------------------------------QPYAAAYSAS 159 (330)
T ss_pred --------------CCCEEEEEcChhhcCC----------------------------------------CCCchhHHHH
Confidence 1366777777665431 1223469999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|+|+.+|++.|+.|+.+. .||+|++|+||+|+||+..+
T Consensus 160 Kaal~~~~~sL~~El~~~---~gI~V~~v~Pg~v~T~~~~~ 197 (330)
T PRK06139 160 KFGLRGFSEALRGELADH---PDIHVCDVYPAFMDTPGFRH 197 (330)
T ss_pred HHHHHHHHHHHHHHhCCC---CCeEEEEEecCCccCccccc
Confidence 999999999999998642 38999999999999998643
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.4e-21 Score=175.95 Aligned_cols=144 Identities=21% Similarity=0.234 Sum_probs=113.6
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
..+.++.++.||++|.++++++++.+.+++|++|+||||||+.....+.+.+ ++|++++++|+.+++.+++++.|.|.+
T Consensus 52 ~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~ 131 (275)
T PRK05876 52 AEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLE 131 (275)
T ss_pred hcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 3466788899999999999999999999999999999999997766666665 778888877777777777776666533
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.+
T Consensus 132 ~~------------------------------------------------------------------------------ 133 (275)
T PRK05876 132 QG------------------------------------------------------------------------------ 133 (275)
T ss_pred cC------------------------------------------------------------------------------
Confidence 10
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.+|+||++||.++... ..+...|++||+
T Consensus 134 ------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK~ 161 (275)
T PRK05876 134 ------------TGGHVVFTASFAGLVP----------------------------------------NAGLGAYGVAKY 161 (275)
T ss_pred ------------CCCEEEEeCChhhccC----------------------------------------CCCCchHHHHHH
Confidence 0256777777766541 223356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++.++++.++.++... ||+|++|+||+++|++..+
T Consensus 162 a~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~~ 196 (275)
T PRK05876 162 GVVGLAETLAREVTAD----GIGVSVLCPMVVETNLVAN 196 (275)
T ss_pred HHHHHHHHHHHHhhhc----CcEEEEEEeCccccccccc
Confidence 9999999999988655 9999999999999998643
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-20 Score=171.70 Aligned_cols=144 Identities=19% Similarity=0.216 Sum_probs=111.5
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.++.||++|.+++.++++.+.+++|++|++|||||.....+..+.+ ++|++.+++|+.+++.+++++++.|++
T Consensus 54 ~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~ 133 (261)
T PRK08936 54 KAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVE 133 (261)
T ss_pred HcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 3456778899999999999999999999999999999999987665555554 777777777777777766666665543
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 134 ~------------------------------------------------------------------------------- 134 (261)
T PRK08936 134 H------------------------------------------------------------------------------- 134 (261)
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
..+|+||++||..+... ..+..+|+++|+
T Consensus 135 -----------~~~g~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sKa 163 (261)
T PRK08936 135 -----------DIKGNIINMSSVHEQIP----------------------------------------WPLFVHYAASKG 163 (261)
T ss_pred -----------CCCcEEEEEccccccCC----------------------------------------CCCCcccHHHHH
Confidence 01256777777655431 223356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|+..+++.++.++.+. ||+||+|+||+|+|++.+.
T Consensus 164 a~~~~~~~la~e~~~~----gi~v~~v~pg~v~t~~~~~ 198 (261)
T PRK08936 164 GVKLMTETLAMEYAPK----GIRVNNIGPGAINTPINAE 198 (261)
T ss_pred HHHHHHHHHHHHHhhc----CeEEEEEEECcCCCCcccc
Confidence 9999999999988765 9999999999999998654
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-20 Score=171.27 Aligned_cols=142 Identities=25% Similarity=0.332 Sum_probs=110.1
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++..+.||++++++++++++.+.+++|++|+||||||+....+..+.+ ++|++.+++|+.+++.+++++.|.|++
T Consensus 59 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-- 136 (257)
T PRK09242 59 EREVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQ-- 136 (257)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh--
Confidence 45788899999999999999999999999999999999986554444444 677777766666666666666665533
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 137 -------------------------------------------------------------------------------- 136 (257)
T PRK09242 137 -------------------------------------------------------------------------------- 136 (257)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
.+.++||++||..+... ..+...|+++|+++
T Consensus 137 ---------~~~~~ii~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 167 (257)
T PRK09242 137 ---------HASSAIVNIGSVSGLTH----------------------------------------VRSGAPYGMTKAAL 167 (257)
T ss_pred ---------cCCceEEEECccccCCC----------------------------------------CCCCcchHHHHHHH
Confidence 11366777777766541 22335699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
..|++.++.++... ||+||+|+||+|+|++.+..
T Consensus 168 ~~~~~~la~e~~~~----~i~v~~i~Pg~i~t~~~~~~ 201 (257)
T PRK09242 168 LQMTRNLAVEWAED----GIRVNAVAPWYIRTPLTSGP 201 (257)
T ss_pred HHHHHHHHHHHHHh----CeEEEEEEECCCCCcccccc
Confidence 99999998888765 99999999999999997653
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-20 Score=171.66 Aligned_cols=138 Identities=20% Similarity=0.241 Sum_probs=105.8
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR-DTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~-~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++.++.||+++.++++++++.+.+++|++|+||||||+.. ..++.+.+ ++|++.+++|+.+++.+++++.|.|++
T Consensus 54 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 133 (260)
T PRK12823 54 AGGEALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLA 133 (260)
T ss_pred cCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 4567888999999999999999999999999999999999753 23444554 677777776666666666666665533
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 134 ~------------------------------------------------------------------------------- 134 (260)
T PRK12823 134 Q------------------------------------------------------------------------------- 134 (260)
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+.|+||++||..+.. .+..+|++||+
T Consensus 135 ------------~~g~iv~~sS~~~~~------------------------------------------~~~~~Y~~sK~ 160 (260)
T PRK12823 135 ------------GGGAIVNVSSIATRG------------------------------------------INRVPYSAAKG 160 (260)
T ss_pred ------------CCCeEEEEcCccccC------------------------------------------CCCCccHHHHH
Confidence 125677777765421 12246999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
|+..|++.++.+++++ ||+||+|+||+|+||+.
T Consensus 161 a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~ 193 (260)
T PRK12823 161 GVNALTASLAFEYAEH----GIRVNAVAPGGTEAPPR 193 (260)
T ss_pred HHHHHHHHHHHHhccc----CcEEEEEecCccCCcch
Confidence 9999999998888765 99999999999999973
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-20 Score=170.56 Aligned_cols=144 Identities=19% Similarity=0.227 Sum_probs=111.0
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
..+.++..+.||+++.++++++++.+.+++|++|+||||||......+.+.+ ++|++++++|+.+++.+++++.+.|.+
T Consensus 49 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 128 (256)
T PRK12743 49 SHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVK 128 (256)
T ss_pred hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 4567789999999999999999999999999999999999987655444444 777777777777777777766665532
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 129 ~------------------------------------------------------------------------------- 129 (256)
T PRK12743 129 Q------------------------------------------------------------------------------- 129 (256)
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.++|+||++||..+.. +..+..+|+++|+
T Consensus 130 -----------~~~g~ii~isS~~~~~----------------------------------------~~~~~~~Y~~sK~ 158 (256)
T PRK12743 130 -----------GQGGRIINITSVHEHT----------------------------------------PLPGASAYTAAKH 158 (256)
T ss_pred -----------CCCeEEEEEeeccccC----------------------------------------CCCCcchhHHHHH
Confidence 0125666666655433 1223457999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.++.++... ||+||+|+||+++|++...
T Consensus 159 a~~~l~~~la~~~~~~----~i~v~~v~Pg~~~t~~~~~ 193 (256)
T PRK12743 159 ALGGLTKAMALELVEH----GILVNAVAPGAIATPMNGM 193 (256)
T ss_pred HHHHHHHHHHHHhhhh----CeEEEEEEeCCccCccccc
Confidence 9999999888888765 9999999999999998653
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-20 Score=171.84 Aligned_cols=166 Identities=17% Similarity=0.149 Sum_probs=113.5
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCC----cEEEECCCCCCCC--CCCCh--hHHHHHHHhHHHHHHHHHHHHHH
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGL----DLLVNNAGIYRDT--APGSF--GQRAETTLATNFFALVTVCHILF 79 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~i----DilVnNAGi~~~~--~~~~~--~~~~~~~~~vNl~~~i~l~ra~~ 79 (313)
+.++.++.||++|.++++++++.+.+.+|.+ |+||||||+.... ...+. .++|++++++|+.+++.+++++.
T Consensus 54 ~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~ 133 (256)
T TIGR01500 54 GLRVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVL 133 (256)
T ss_pred CceEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4568889999999999999999998887753 6999999986432 22222 25666666666666666666655
Q ss_pred hcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhc
Q psy2266 80 PLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLAT 159 (313)
Q Consensus 80 ~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~ 159 (313)
|.|++.+
T Consensus 134 ~~l~~~~------------------------------------------------------------------------- 140 (256)
T TIGR01500 134 KAFKDSP------------------------------------------------------------------------- 140 (256)
T ss_pred HHHhhcC-------------------------------------------------------------------------
Confidence 5553210
Q ss_pred ccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCch
Q psy2266 160 NFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSY 239 (313)
Q Consensus 160 N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 239 (313)
...|+|+++||..+... ..+..+|
T Consensus 141 ----------------~~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y 164 (256)
T TIGR01500 141 ----------------GLNRTVVNISSLCAIQP----------------------------------------FKGWALY 164 (256)
T ss_pred ----------------CCCCEEEEECCHHhCCC----------------------------------------CCCchHH
Confidence 01256777777766431 2233569
Q ss_pred hhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccC--CCCcchhhhhhhhhhcccCCc
Q psy2266 240 SVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG--VLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 240 ~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~l~r~~~ 306 (313)
++||+|+..|++.++.+++.. ||+||+|+||+|+|+|.+... ...++..+......|++|.++
T Consensus 165 ~asKaal~~l~~~la~e~~~~----~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (256)
T TIGR01500 165 CAGKAARDMLFQVLALEEKNP----NVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVD 229 (256)
T ss_pred HHHHHHHHHHHHHHHHHhcCC----CeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCC
Confidence 999999999999988887755 999999999999999875421 112222233344556666554
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >KOG4169|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-21 Score=173.97 Aligned_cols=139 Identities=25% Similarity=0.360 Sum_probs=105.6
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccC-Cc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP-HA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~-~g 86 (313)
..++.+++|||++..++++.++.+.++||+|||||||||+... .+|++.+++|+.|.+.-+..++|+|.+ .|
T Consensus 54 ~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~~d-------kd~e~Ti~vNLtgvin~T~~alpyMdk~~g 126 (261)
T KOG4169|consen 54 SVSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGILDD-------KDWERTINVNLTGVINGTQLALPYMDKKQG 126 (261)
T ss_pred CceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEcccccccc-------hhHHHhhccchhhhhhhhhhhhhhhhhhcC
Confidence 4568889999999999999999999999999999999999763 345555555555555544444444422 00
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 127 -------------------------------------------------------------------------------- 126 (261)
T KOG4169|consen 127 -------------------------------------------------------------------------------- 126 (261)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
-++|-||||||..|+.+. +..+.|++||+|+
T Consensus 127 ---------G~GGiIvNmsSv~GL~P~----------------------------------------p~~pVY~AsKaGV 157 (261)
T KOG4169|consen 127 ---------GKGGIIVNMSSVAGLDPM----------------------------------------PVFPVYAASKAGV 157 (261)
T ss_pred ---------CCCcEEEEeccccccCcc----------------------------------------ccchhhhhcccce
Confidence 023789999999998743 2334699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
..|||+++...- +.+.||++|.||||+++|++.+..
T Consensus 158 vgFTRSla~~ay--y~~sGV~~~avCPG~t~t~l~~~~ 193 (261)
T KOG4169|consen 158 VGFTRSLADLAY--YQRSGVRFNAVCPGFTRTDLAENI 193 (261)
T ss_pred eeeehhhhhhhh--HhhcCEEEEEECCCcchHHHHHHH
Confidence 999998776432 234599999999999999997764
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-20 Score=188.81 Aligned_cols=145 Identities=23% Similarity=0.307 Sum_probs=115.4
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+..|.++.++.||++|.+++.++++.+.+++|++|+||||||+.....+.+.+ ++|++++++|+.+++.++|++.|.|+
T Consensus 360 ~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~ 439 (582)
T PRK05855 360 RAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMV 439 (582)
T ss_pred HhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34466788999999999999999999999999999999999998766666655 78888887777777777777666664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 440 ~~------------------------------------------------------------------------------ 441 (582)
T PRK05855 440 ER------------------------------------------------------------------------------ 441 (582)
T ss_pred hc------------------------------------------------------------------------------
Confidence 31
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
..+|+||++||.++... ..+..+|++||
T Consensus 442 ------------~~~g~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK 469 (582)
T PRK05855 442 ------------GTGGHIVNVASAAAYAP----------------------------------------SRSLPAYATSK 469 (582)
T ss_pred ------------CCCcEEEEECChhhccC----------------------------------------CCCCcHHHHHH
Confidence 01256777777766541 22345699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+|+..+++.++.++.+. ||+|++|+||+|+|+|.+.
T Consensus 470 aa~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~~ 505 (582)
T PRK05855 470 AAVLMLSECLRAELAAA----GIGVTAICPGFVDTNIVAT 505 (582)
T ss_pred HHHHHHHHHHHHHhccc----CcEEEEEEeCCCcccchhc
Confidence 99999999998888765 9999999999999998665
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.5e-20 Score=168.20 Aligned_cols=143 Identities=23% Similarity=0.200 Sum_probs=109.2
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.+...++||+++.++++++++.+.+.+|++|+||||||.... .++.+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 55 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 134 (252)
T PRK07035 55 AGGKAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKE 134 (252)
T ss_pred cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 45567889999999999999999999999999999999997542 3444444 667777777766666666666665533
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 135 ~------------------------------------------------------------------------------- 135 (252)
T PRK07035 135 Q------------------------------------------------------------------------------- 135 (252)
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+.++|+++||..+..+ ..+..+|++||+
T Consensus 136 ------------~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~ 163 (252)
T PRK07035 136 ------------GGGSIVNVASVNGVSP----------------------------------------GDFQGIYSITKA 163 (252)
T ss_pred ------------CCcEEEEECchhhcCC----------------------------------------CCCCcchHHHHH
Confidence 1256777777655431 223356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
++..+++.+++++.+. ||+||+|+||+|+|++.+..
T Consensus 164 al~~~~~~l~~e~~~~----gi~v~~i~PG~v~t~~~~~~ 199 (252)
T PRK07035 164 AVISMTKAFAKECAPF----GIRVNALLPGLTDTKFASAL 199 (252)
T ss_pred HHHHHHHHHHHHHhhc----CEEEEEEeeccccCcccccc
Confidence 9999999999988766 99999999999999987653
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-20 Score=169.49 Aligned_cols=164 Identities=24% Similarity=0.269 Sum_probs=123.4
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.|.++..+++|++|+++++++++.+.+++|++|+||||||.....++.+.+ ++|++++++|+.+++.+++++.+.|++.
T Consensus 57 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (255)
T PRK07523 57 QGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR 136 (255)
T ss_pred cCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 356688899999999999999999999999999999999998766665555 8888888888888888888877776431
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 137 -------------------------------------------------------------------------------- 136 (255)
T PRK07523 137 -------------------------------------------------------------------------------- 136 (255)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+.|+||++||..+.. +..+...|+++|++
T Consensus 137 -----------~~g~iv~iss~~~~~----------------------------------------~~~~~~~y~~sK~a 165 (255)
T PRK07523 137 -----------GAGKIINIASVQSAL----------------------------------------ARPGIAPYTATKGA 165 (255)
T ss_pred -----------CCeEEEEEccchhcc----------------------------------------CCCCCccHHHHHHH
Confidence 125566666655432 12233569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
+..+++.++.++++. ||+||+|.||+++|++.+.... .+...+......|++|++.
T Consensus 166 ~~~~~~~~a~e~~~~----gi~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 221 (255)
T PRK07523 166 VGNLTKGMATDWAKH----GLQCNAIAPGYFDTPLNAALVA-DPEFSAWLEKRTPAGRWGK 221 (255)
T ss_pred HHHHHHHHHHHhhHh----CeEEEEEEECcccCchhhhhcc-CHHHHHHHHhcCCCCCCcC
Confidence 999999998888765 9999999999999998664311 1222233444567777664
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-20 Score=174.72 Aligned_cols=139 Identities=19% Similarity=0.284 Sum_probs=109.0
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.++..++||++|.++++++++.+.+++|+||+||||||+....++.+.+ ++|++++++|+.+++.+++++.|.|++
T Consensus 57 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~--- 133 (296)
T PRK05872 57 DRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIE--- 133 (296)
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---
Confidence 4566778999999999999999999999999999999998766666665 777777766666666666666555432
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 134 -------------------------------------------------------------------------------- 133 (296)
T PRK05872 134 -------------------------------------------------------------------------------- 133 (296)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
++|+||++||..+... ..+...|++||+++.
T Consensus 134 ---------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asKaal~ 164 (296)
T PRK05872 134 ---------RRGYVLQVSSLAAFAA----------------------------------------APGMAAYCASKAGVE 164 (296)
T ss_pred ---------cCCEEEEEeCHhhcCC----------------------------------------CCCchHHHHHHHHHH
Confidence 2356666666665431 123346999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.|++.++.++... ||+||+|+||+++|++.+.
T Consensus 165 ~~~~~l~~e~~~~----gi~v~~v~Pg~v~T~~~~~ 196 (296)
T PRK05872 165 AFANALRLEVAHH----GVTVGSAYLSWIDTDLVRD 196 (296)
T ss_pred HHHHHHHHHHHHH----CcEEEEEecCcccchhhhh
Confidence 9999999988766 9999999999999999765
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.1e-20 Score=166.28 Aligned_cols=163 Identities=25% Similarity=0.345 Sum_probs=121.5
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHH-hccc
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILF-PLLR 83 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~-~~m~ 83 (313)
+.+.++.++++|++|.++++++++.+.+.+|++|++|||||+....++.+.+ ++|+.++++|+.+++.+++++. |.++
T Consensus 45 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 124 (239)
T TIGR01831 45 AQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIR 124 (239)
T ss_pred HcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 4466788999999999999999999999999999999999987655554444 7777777777777777766553 3222
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 125 ~------------------------------------------------------------------------------- 125 (239)
T TIGR01831 125 A------------------------------------------------------------------------------- 125 (239)
T ss_pred h-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++.|+||++||..+... ..+...|+++|
T Consensus 126 ------------~~~~~iv~vsS~~~~~~----------------------------------------~~~~~~Y~~sK 153 (239)
T TIGR01831 126 ------------RQGGRIITLASVSGVMG----------------------------------------NRGQVNYSAAK 153 (239)
T ss_pred ------------cCCeEEEEEcchhhccC----------------------------------------CCCCcchHHHH
Confidence 12367778887776541 22335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+++..+++.++.++.++ ||+||+|+||+++|++.+.. . +..+......|++|.++.
T Consensus 154 ~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~~---~-~~~~~~~~~~~~~~~~~~ 209 (239)
T TIGR01831 154 AGLIGATKALAVELAKR----KITVNCIAPGLIDTEMLAEV---E-HDLDEALKTVPMNRMGQP 209 (239)
T ss_pred HHHHHHHHHHHHHHhHh----CeEEEEEEEccCccccchhh---h-HHHHHHHhcCCCCCCCCH
Confidence 99999999999998766 99999999999999997642 1 222233445677776643
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=5e-20 Score=167.53 Aligned_cols=143 Identities=19% Similarity=0.250 Sum_probs=112.6
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.+++||++++++++++++.+.+++|+||+||||||+....++.+.+ ++|++++++|+.+++.+++++.+.|++.
T Consensus 49 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 128 (256)
T PRK08643 49 DGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKL 128 (256)
T ss_pred cCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 356778899999999999999999999999999999999987666666655 7788888777777777777766655331
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 129 -------------------------------------------------------------------------------- 128 (256)
T PRK08643 129 -------------------------------------------------------------------------------- 128 (256)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
..+++|+++||..+... ..+..+|+++|++
T Consensus 129 ----------~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~a 158 (256)
T PRK08643 129 ----------GHGGKIINATSQAGVVG----------------------------------------NPELAVYSSTKFA 158 (256)
T ss_pred ----------CCCCEEEEECccccccC----------------------------------------CCCCchhHHHHHH
Confidence 11256777777766431 2233569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.++.++.+. ||+||+|+||+++|++...
T Consensus 159 ~~~~~~~la~e~~~~----gi~v~~i~Pg~v~t~~~~~ 192 (256)
T PRK08643 159 VRGLTQTAARDLASE----GITVNAYAPGIVKTPMMFD 192 (256)
T ss_pred HHHHHHHHHHHhccc----CcEEEEEeeCCCcChhhhH
Confidence 999999988887655 9999999999999998654
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.2e-20 Score=169.50 Aligned_cols=136 Identities=21% Similarity=0.259 Sum_probs=104.1
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++..+.+|++|+++++++++ ++|++|++|||||+....++.+.+ ++|++++++|+.+++.+++++.|.|++.
T Consensus 56 ~~~~~~~~~D~~~~~~~~~~~~----~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~- 130 (259)
T PRK06125 56 GVDVAVHALDLSSPEAREQLAA----EAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR- 130 (259)
T ss_pred CCceEEEEecCCCHHHHHHHHH----HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-
Confidence 5578889999999999888765 468999999999997666666665 7888888777777777777776666431
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 131 -------------------------------------------------------------------------------- 130 (259)
T PRK06125 131 -------------------------------------------------------------------------------- 130 (259)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+.|+||++||..+..+ ......|+++|+|+
T Consensus 131 ----------~~g~iv~iss~~~~~~----------------------------------------~~~~~~y~ask~al 160 (259)
T PRK06125 131 ----------GSGVIVNVIGAAGENP----------------------------------------DADYICGSAGNAAL 160 (259)
T ss_pred ----------CCcEEEEecCccccCC----------------------------------------CCCchHhHHHHHHH
Confidence 1256666666655431 12234599999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
..|++.++.++.+. ||+||+|+||+++|++..
T Consensus 161 ~~~~~~la~e~~~~----gi~v~~i~PG~v~t~~~~ 192 (259)
T PRK06125 161 MAFTRALGGKSLDD----GVRVVGVNPGPVATDRML 192 (259)
T ss_pred HHHHHHHHHHhCcc----CeEEEEEecCccccHHHH
Confidence 99998888887655 999999999999999743
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.9e-20 Score=166.62 Aligned_cols=163 Identities=24% Similarity=0.242 Sum_probs=118.2
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.++++|+++.++++++++.+.+++|++|+||||||+.....+.+.+ ++|++.+++|+.+++.+++++.+.|++.
T Consensus 46 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~- 124 (252)
T PRK07856 46 GRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQ- 124 (252)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-
Confidence 45678899999999999999999999999999999999987665555555 7788888888888877777777665431
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 125 -------------------------------------------------------------------------------- 124 (252)
T PRK07856 125 -------------------------------------------------------------------------------- 124 (252)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
...|+||++||..+... ..+...|++||+++
T Consensus 125 ---------~~~g~ii~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 155 (252)
T PRK07856 125 ---------PGGGSIVNIGSVSGRRP----------------------------------------SPGTAAYGAAKAGL 155 (252)
T ss_pred ---------CCCcEEEEEcccccCCC----------------------------------------CCCCchhHHHHHHH
Confidence 01256677777665431 22335699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
..|++.++.++. +. |++|+|+||+|+|++..... ..++..+......|++|.++
T Consensus 156 ~~l~~~la~e~~----~~-i~v~~i~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 209 (252)
T PRK07856 156 LNLTRSLAVEWA----PK-VRVNAVVVGLVRTEQSELHY-GDAEGIAAVAATVPLGRLAT 209 (252)
T ss_pred HHHHHHHHHHhc----CC-eEEEEEEeccccChHHhhhc-cCHHHHHHHhhcCCCCCCcC
Confidence 999988888775 33 99999999999999865421 12222223333455665543
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.6e-20 Score=173.68 Aligned_cols=89 Identities=25% Similarity=0.379 Sum_probs=71.9
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC-
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFG-QRAETTLATNFFALVTVCHILFPLLRP- 84 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~- 84 (313)
+.++.+++||++|.++++++++.+.+.+++||+||||||+.... +..+++ ++|++++++|+.+++.++++++|.|++
T Consensus 46 ~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~ 125 (308)
T PLN00015 46 KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKS 125 (308)
T ss_pred CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 45678889999999999999999998899999999999986432 344444 889999999999999999988888854
Q ss_pred ---CceEEEEecccc
Q psy2266 85 ---HARVVNVASKLG 96 (313)
Q Consensus 85 ---~g~IV~isS~~~ 96 (313)
+|+||++||..+
T Consensus 126 ~~~~g~IV~vsS~~~ 140 (308)
T PLN00015 126 DYPSKRLIIVGSITG 140 (308)
T ss_pred CCCCCEEEEEecccc
Confidence 256666666544
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.8e-20 Score=170.33 Aligned_cols=145 Identities=18% Similarity=0.222 Sum_probs=110.7
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
..+.++.++.||+++.+++.++++.+.+.+|++|+||||||+....+..+.+ ++|++++++|+.+++.+++++.|.|++
T Consensus 59 ~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~ 138 (273)
T PRK08278 59 AAGGQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKK 138 (273)
T ss_pred hcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHh
Confidence 4466788999999999999999999999999999999999987666555555 777777777777777777776666543
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 139 ~------------------------------------------------------------------------------- 139 (273)
T PRK08278 139 S------------------------------------------------------------------------------- 139 (273)
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.+|+|+++||..+.... ...+..+|++||+
T Consensus 140 ------------~~g~iv~iss~~~~~~~--------------------------------------~~~~~~~Y~~sK~ 169 (273)
T PRK08278 140 ------------ENPHILTLSPPLNLDPK--------------------------------------WFAPHTAYTMAKY 169 (273)
T ss_pred ------------CCCEEEEECCchhcccc--------------------------------------ccCCcchhHHHHH
Confidence 12556666665443210 0023356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeeccc-ccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPG-YVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG-~v~T~~~~~ 283 (313)
++..+++.++.++.+. ||+||+|+|| +++|++.+.
T Consensus 170 a~~~~~~~la~el~~~----~I~v~~i~Pg~~i~t~~~~~ 205 (273)
T PRK08278 170 GMSLCTLGLAEEFRDD----GIAVNALWPRTTIATAAVRN 205 (273)
T ss_pred HHHHHHHHHHHHhhhc----CcEEEEEeCCCccccHHHHh
Confidence 9999999999888765 9999999999 689986553
|
|
| >KOG1207|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-21 Score=166.57 Aligned_cols=180 Identities=22% Similarity=0.227 Sum_probs=141.0
Q ss_pred cccCCceEEEEecccccccCCCchhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhh
Q psy2266 81 LLRPHARVVNVASKLGMLYNVPSQELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAET 155 (313)
Q Consensus 81 ~m~~~g~IV~isS~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~ 155 (313)
+.+.|.++|.+++..+.+..+....-. ..+.+-+++. .+.+.+.....+++|.|+||||.-...||+ |.+++
T Consensus 27 La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~---wea~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr 103 (245)
T KOG1207|consen 27 LAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSA---WEALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDR 103 (245)
T ss_pred HHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccH---HHHHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcc
Confidence 335688999999887776444222111 1123322222 455666677789999999999999999985 68999
Q ss_pred hhhcccccHHHHHHHHhhcccC---CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccC
Q psy2266 156 TLATNFFALVTVCHILFPLLRP---HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEA 232 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p~l~~---~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (313)
.|++|+++.+.+++.+...|-+ .|.|||+||.++.+.
T Consensus 104 ~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~---------------------------------------- 143 (245)
T KOG1207|consen 104 TFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRP---------------------------------------- 143 (245)
T ss_pred eeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccc----------------------------------------
Confidence 9999999999999996654422 378999999999772
Q ss_pred CCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 233 GWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 233 ~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
......|+++|+|+.+++|+++.||.++ .||||+|.|-.|.|+|.+.. |..|...+......|++|+.+.+
T Consensus 144 ~~nHtvYcatKaALDmlTk~lAlELGp~----kIRVNsVNPTVVmT~MG~dn-WSDP~K~k~mL~riPl~rFaEV~ 214 (245)
T KOG1207|consen 144 LDNHTVYCATKAALDMLTKCLALELGPQ----KIRVNSVNPTVVMTDMGRDN-WSDPDKKKKMLDRIPLKRFAEVD 214 (245)
T ss_pred cCCceEEeecHHHHHHHHHHHHHhhCcc----eeEeeccCCeEEEecccccc-cCCchhccchhhhCchhhhhHHH
Confidence 2234569999999999999999999877 99999999999999998764 78999999999999999988754
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.7e-20 Score=165.84 Aligned_cols=162 Identities=17% Similarity=0.183 Sum_probs=110.1
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCC-CcEEEECCCCCCC------CCCCChh-HHHHHHHhHHHHHHHHHHHHHH
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGG-LDLLVNNAGIYRD------TAPGSFG-QRAETTLATNFFALVTVCHILF 79 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~-iDilVnNAGi~~~------~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~ 79 (313)
+.++.+++||++|.++++++++.+.+.+|+ +|++|||||+... .++.+.+ ++|++.+++|+.+++.+++++.
T Consensus 51 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (253)
T PRK08642 51 GDRAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAAL 130 (253)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHH
Confidence 456788999999999999999999999997 9999999997421 1233333 5556666555555555555555
Q ss_pred hcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhc
Q psy2266 80 PLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLAT 159 (313)
Q Consensus 80 ~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~ 159 (313)
+.|.+
T Consensus 131 ~~~~~--------------------------------------------------------------------------- 135 (253)
T PRK08642 131 PGMRE--------------------------------------------------------------------------- 135 (253)
T ss_pred HHHHh---------------------------------------------------------------------------
Confidence 44422
Q ss_pred ccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCch
Q psy2266 160 NFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSY 239 (313)
Q Consensus 160 N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 239 (313)
.+.|+|+++||..+.. +..+..+|
T Consensus 136 ----------------~~~g~iv~iss~~~~~----------------------------------------~~~~~~~Y 159 (253)
T PRK08642 136 ----------------QGFGRIINIGTNLFQN----------------------------------------PVVPYHDY 159 (253)
T ss_pred ----------------cCCeEEEEECCccccC----------------------------------------CCCCccch
Confidence 1126777777765432 12233569
Q ss_pred hhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 240 SVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 240 ~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
++||+|+..+++.+++++.+. ||+||+|+||+++|++.... ..++..+......|++|+++
T Consensus 160 ~~sK~a~~~l~~~la~~~~~~----~i~v~~i~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~ 220 (253)
T PRK08642 160 TTAKAALLGLTRNLAAELGPY----GITVNMVSGGLLRTTDASAA--TPDEVFDLIAATTPLRKVTT 220 (253)
T ss_pred HHHHHHHHHHHHHHHHHhCcc----CeEEEEEeecccCCchhhcc--CCHHHHHHHHhcCCcCCCCC
Confidence 999999999999988888765 99999999999999864431 22222233334456666544
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.1e-20 Score=169.01 Aligned_cols=139 Identities=25% Similarity=0.259 Sum_probs=108.2
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD--TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~--~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.++.++++|++|.++++++++.+.+++|++|+||||||+... ..+.+.+ ++|++++++|+.+++.+++++.+.|.+
T Consensus 66 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~- 144 (280)
T PLN02253 66 PNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIP- 144 (280)
T ss_pred CceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh-
Confidence 467889999999999999999999999999999999998643 2344444 777777777777777766666665532
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 145 -------------------------------------------------------------------------------- 144 (280)
T PLN02253 145 -------------------------------------------------------------------------------- 144 (280)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+++|+|++++|..+... ..+..+|++||+|
T Consensus 145 ----------~~~g~ii~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a 174 (280)
T PLN02253 145 ----------LKKGSIVSLCSVASAIG----------------------------------------GLGPHAYTGSKHA 174 (280)
T ss_pred ----------cCCceEEEecChhhccc----------------------------------------CCCCcccHHHHHH
Confidence 12366777777666431 1233469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+..+++.++.++... ||+||+|+||+|+|++..
T Consensus 175 ~~~~~~~la~e~~~~----gi~v~~i~pg~v~t~~~~ 207 (280)
T PLN02253 175 VLGLTRSVAAELGKH----GIRVNCVSPYAVPTALAL 207 (280)
T ss_pred HHHHHHHHHHHhhhc----CeEEEEEeeCcccccccc
Confidence 999999998888765 999999999999999754
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.9e-20 Score=164.59 Aligned_cols=161 Identities=27% Similarity=0.274 Sum_probs=113.7
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.++.+|+++.++++++++.+.+++|++|++|||||+....++.+.+ ++|++++++|+.+++.+++
T Consensus 52 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~-------- 123 (245)
T PRK12937 52 AAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLR-------- 123 (245)
T ss_pred hcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHH--------
Confidence 4466788999999999999999999999999999999999987655444444 5566666555555555555
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 124 -------------------------------------------------------------------------------- 123 (245)
T PRK12937 124 -------------------------------------------------------------------------------- 123 (245)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+++|.|+++|+|+++||..+... ..+..+|+++|+
T Consensus 124 -----~~~~~~~~~~~iv~~ss~~~~~~----------------------------------------~~~~~~Y~~sK~ 158 (245)
T PRK12937 124 -----EAARHLGQGGRIINLSTSVIALP----------------------------------------LPGYGPYAASKA 158 (245)
T ss_pred -----HHHHHhccCcEEEEEeeccccCC----------------------------------------CCCCchhHHHHH
Confidence 44454544466666666555431 123356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCC
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTN 305 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~ 305 (313)
++..+++.++.++... ||++++|+||+++|++.... ..++.........|++|.+
T Consensus 159 a~~~~~~~~a~~~~~~----~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~ 213 (245)
T PRK12937 159 AVEGLVHVLANELRGR----GITVNAVAPGPVATELFFNG--KSAEQIDQLAGLAPLERLG 213 (245)
T ss_pred HHHHHHHHHHHHhhhc----CeEEEEEEeCCccCchhccc--CCHHHHHHHHhcCCCCCCC
Confidence 9999999988887765 99999999999999985431 1222333333344555544
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=8e-20 Score=164.44 Aligned_cols=74 Identities=20% Similarity=0.229 Sum_probs=59.1
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.++.||++|.++++++++.+.+++|++|++|||||+.......+.+ ++|++++++|+.+++.+++++.+.|++
T Consensus 48 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~ 122 (236)
T PRK06483 48 AQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRG 122 (236)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHh
Confidence 56789999999999999999999999999999999986544333443 778888877777777777777666643
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.3e-20 Score=164.95 Aligned_cols=142 Identities=24% Similarity=0.357 Sum_probs=110.2
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++..+.||++|.++++++++.+.+.+|++|+||||||.....++.+.+ ++|++++++|+.+++.+++++.+.|++.
T Consensus 51 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 130 (246)
T PRK12938 51 LGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER 130 (246)
T ss_pred cCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 456678889999999999999999999999999999999987655554544 7778888777777777777766655431
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 131 -------------------------------------------------------------------------------- 130 (246)
T PRK12938 131 -------------------------------------------------------------------------------- 130 (246)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+.++|+++||..+... ..+...|+++|++
T Consensus 131 -----------~~~~iv~isS~~~~~~----------------------------------------~~~~~~y~~sK~a 159 (246)
T PRK12938 131 -----------GWGRIINISSVNGQKG----------------------------------------QFGQTNYSTAKAG 159 (246)
T ss_pred -----------CCeEEEEEechhccCC----------------------------------------CCCChhHHHHHHH
Confidence 1256666666655431 1233469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.+++++... ||++|+|+||+++|++.+.
T Consensus 160 ~~~~~~~l~~~~~~~----gi~v~~i~pg~~~t~~~~~ 193 (246)
T PRK12938 160 IHGFTMSLAQEVATK----GVTVNTVSPGYIGTDMVKA 193 (246)
T ss_pred HHHHHHHHHHHhhhh----CeEEEEEEecccCCchhhh
Confidence 999998888887655 9999999999999998654
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-19 Score=164.90 Aligned_cols=140 Identities=21% Similarity=0.264 Sum_probs=108.0
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.++.++++|+++.++++++++.+.++++++|++|||||+....++.+.+ ++|++++++|+.+++.+++++.+.|++.
T Consensus 61 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-- 138 (255)
T PRK06841 61 GNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA-- 138 (255)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc--
Confidence 4566899999999999999999999999999999999987655554444 6677777666666666666665555331
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 139 -------------------------------------------------------------------------------- 138 (255)
T PRK06841 139 -------------------------------------------------------------------------------- 138 (255)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
..++||++||..+... .....+|+++|+++.
T Consensus 139 ---------~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~ 169 (255)
T PRK06841 139 ---------GGGKIVNLASQAGVVA----------------------------------------LERHVAYCASKAGVV 169 (255)
T ss_pred ---------CCceEEEEcchhhccC----------------------------------------CCCCchHHHHHHHHH
Confidence 1266777777665431 223356999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.+++.++.+++++ ||+||+|+||+|+|++.+.
T Consensus 170 ~~~~~la~e~~~~----gi~v~~v~pg~v~t~~~~~ 201 (255)
T PRK06841 170 GMTKVLALEWGPY----GITVNAISPTVVLTELGKK 201 (255)
T ss_pred HHHHHHHHHHHhh----CeEEEEEEeCcCcCccccc
Confidence 9999999988766 9999999999999998654
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-19 Score=166.31 Aligned_cols=136 Identities=21% Similarity=0.254 Sum_probs=101.4
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCC---------ChhHHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPG---------SFGQRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~---------~~~~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
++..+++|++|+++++++++.+.+++|++|+||||||+.....+. +.+
T Consensus 50 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~----------------------- 106 (266)
T PRK06171 50 NYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELN----------------------- 106 (266)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCC-----------------------
Confidence 567889999999999999999999999999999999986543221 122
Q ss_pred cccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcc
Q psy2266 81 LLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATN 160 (313)
Q Consensus 81 ~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N 160 (313)
.++|+.++++|
T Consensus 107 ---------------------------------------------------------------------~~~~~~~~~~n 117 (266)
T PRK06171 107 ---------------------------------------------------------------------EAAFDKMFNIN 117 (266)
T ss_pred ---------------------------------------------------------------------HHHHHHHHhhh
Confidence 13444555555
Q ss_pred cccHHHHHHHHhhcccC--CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCc
Q psy2266 161 FFALVTVCHILFPLLRP--HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFS 238 (313)
Q Consensus 161 ~~g~~~~~~~~~p~l~~--~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
+.|++.++++++|.|++ .|+||++||..+... ..+...
T Consensus 118 ~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------------------------------------~~~~~~ 157 (266)
T PRK06171 118 QKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEG----------------------------------------SEGQSC 157 (266)
T ss_pred chhHHHHHHHHHHHHHhcCCcEEEEEccccccCC----------------------------------------CCCCch
Confidence 55555555555555543 367888888776541 223356
Q ss_pred hhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccc-cccc
Q psy2266 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVN-TDLT 281 (313)
Q Consensus 239 Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~-T~~~ 281 (313)
|++||+|+..|++.++.++++. ||+||+|+||+++ |++.
T Consensus 158 Y~~sK~a~~~l~~~la~e~~~~----gi~v~~v~pG~~~~t~~~ 197 (266)
T PRK06171 158 YAATKAALNSFTRSWAKELGKH----NIRVVGVAPGILEATGLR 197 (266)
T ss_pred hHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeccccccCCCc
Confidence 9999999999999998888765 9999999999997 6664
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.6e-20 Score=172.78 Aligned_cols=152 Identities=23% Similarity=0.273 Sum_probs=106.0
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.++.++.||++|.++++++++.+.+++++||+||||||+.... ....+
T Consensus 65 ~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~~-~~~~t------------------------------- 112 (313)
T PRK05854 65 AKLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPP-ERQTT------------------------------- 112 (313)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccCC-ccccC-------------------------------
Confidence 4678889999999999999999999999999999999986532 11222
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
.++|+.+|++|+.|++.++
T Consensus 113 -------------------------------------------------------------~~~~e~~~~vN~~g~~~l~ 131 (313)
T PRK05854 113 -------------------------------------------------------------ADGFELQFGTNHLGHFALT 131 (313)
T ss_pred -------------------------------------------------------------cccHHHHhhhhhHHHHHHH
Confidence 1345555566666666666
Q ss_pred HHHhhcccC-CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 169 HILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 169 ~~~~p~l~~-~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
+.++|.|++ .++||++||.++....+...+ + +....+.+..+|+.||+|+.
T Consensus 132 ~~llp~l~~~~~riv~vsS~~~~~~~~~~~~---------~-------------------~~~~~~~~~~~Y~~SK~a~~ 183 (313)
T PRK05854 132 AHLLPLLRAGRARVTSQSSIAARRGAINWDD---------L-------------------NWERSYAGMRAYSQSKIAVG 183 (313)
T ss_pred HHHHHHHHhCCCCeEEEechhhcCCCcCccc---------c-------------------cccccCcchhhhHHHHHHHH
Confidence 666666654 378888888876432111000 0 00011233456999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.+++.+++++.. .+.||+||+|+||+|+|++...
T Consensus 184 ~~~~~la~~~~~--~~~gI~v~~v~PG~v~T~~~~~ 217 (313)
T PRK05854 184 LFALELDRRSRA--AGWGITSNLAHPGVAPTNLLAA 217 (313)
T ss_pred HHHHHHHHHhhc--CCCCeEEEEEecceeccCcccc
Confidence 999888876542 2458999999999999998643
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-19 Score=165.44 Aligned_cols=143 Identities=23% Similarity=0.333 Sum_probs=110.7
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.+++||+++.++++++++.+.+++|++|+||||||+.....+.+.+ ++|++.+++|+.+++.+++++.+.|++.
T Consensus 52 ~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (263)
T PRK08226 52 RGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR 131 (263)
T ss_pred hCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 356778899999999999999999999999999999999987655555544 7788888888888877777777665431
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 132 -------------------------------------------------------------------------------- 131 (263)
T PRK08226 132 -------------------------------------------------------------------------------- 131 (263)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+.++||++||..+... ...+...|+++|++
T Consensus 132 -----------~~~~iv~isS~~~~~~---------------------------------------~~~~~~~Y~~sK~a 161 (263)
T PRK08226 132 -----------KDGRIVMMSSVTGDMV---------------------------------------ADPGETAYALTKAA 161 (263)
T ss_pred -----------CCcEEEEECcHHhccc---------------------------------------CCCCcchHHHHHHH
Confidence 1245666666544211 01223469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++.+++.++.++.+. ||+||+|+||+++|++.+.
T Consensus 162 ~~~~~~~la~~~~~~----~i~v~~i~pg~v~t~~~~~ 195 (263)
T PRK08226 162 IVGLTKSLAVEYAQS----GIRVNAICPGYVRTPMAES 195 (263)
T ss_pred HHHHHHHHHHHhccc----CcEEEEEecCcccCHHHHh
Confidence 999999988888765 9999999999999998754
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-19 Score=167.97 Aligned_cols=138 Identities=25% Similarity=0.356 Sum_probs=107.7
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHc-CCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQH-GGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~-g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
+.++.+|++|.++++++++.+.+++ |++|+||||||+.....+.+.+ ++|+.++++|+.+++.+++.+.|.|++.
T Consensus 49 ~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~--- 125 (277)
T PRK05993 49 LEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ--- 125 (277)
T ss_pred ceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc---
Confidence 5778999999999999999997776 6899999999998766666655 7777777777777777666666665431
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 126 -------------------------------------------------------------------------------- 125 (277)
T PRK05993 126 -------------------------------------------------------------------------------- 125 (277)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
+.|+||++||..+... ..+..+|++||+++..
T Consensus 126 --------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK~a~~~ 157 (277)
T PRK05993 126 --------GQGRIVQCSSILGLVP----------------------------------------MKYRGAYNASKFAIEG 157 (277)
T ss_pred --------CCCEEEEECChhhcCC----------------------------------------CCccchHHHHHHHHHH
Confidence 1256777777665431 1233569999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+++.++.++++. ||+|++|+||+|+|++...
T Consensus 158 ~~~~l~~el~~~----gi~v~~v~Pg~v~T~~~~~ 188 (277)
T PRK05993 158 LSLTLRMELQGS----GIHVSLIEPGPIETRFRAN 188 (277)
T ss_pred HHHHHHHHhhhh----CCEEEEEecCCccCchhhH
Confidence 999988888765 9999999999999998653
|
|
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.7e-20 Score=169.80 Aligned_cols=138 Identities=32% Similarity=0.412 Sum_probs=106.5
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcC--CCcEEEECCCCCCCCCCCCh-h-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHG--GLDLLVNNAGIYRDTAPGSF-G-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g--~iDilVnNAGi~~~~~~~~~-~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
.++..++++||+++++|+++.++++++.+ ++=.||||||+.......+. + ++|+++
T Consensus 75 s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~-------------------- 134 (322)
T KOG1610|consen 75 SPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKV-------------------- 134 (322)
T ss_pred CCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHH--------------------
Confidence 56778889999999999999999999764 68999999998765433222 2 555544
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+++|++|
T Consensus 135 -------------------------------------------------------------------------l~vNllG 141 (322)
T KOG1610|consen 135 -------------------------------------------------------------------------LNVNLLG 141 (322)
T ss_pred -------------------------------------------------------------------------Hhhhhhh
Confidence 4566666
Q ss_pred HHHHHHHHhhcccC-CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 164 LVTVCHILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 164 ~~~~~~~~~p~l~~-~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
++.++++++|++|+ +||||+|||..|.. ..+..++|++|
T Consensus 142 ~irvT~~~lpLlr~arGRvVnvsS~~GR~----------------------------------------~~p~~g~Y~~S 181 (322)
T KOG1610|consen 142 TIRVTKAFLPLLRRARGRVVNVSSVLGRV----------------------------------------ALPALGPYCVS 181 (322)
T ss_pred HHHHHHHHHHHHHhccCeEEEecccccCc----------------------------------------cCcccccchhh
Confidence 66666666666665 48888888888855 23344569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
|+|+..++.++.+|+..- ||+|..|-||..+|++..
T Consensus 182 K~aVeaf~D~lR~EL~~f----GV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 182 KFAVEAFSDSLRRELRPF----GVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred HHHHHHHHHHHHHHHHhc----CcEEEEeccCccccccCC
Confidence 999999998888777654 999999999999999975
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-19 Score=164.24 Aligned_cols=143 Identities=21% Similarity=0.330 Sum_probs=113.7
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.++.||+++++++.++++.+.+.+|++|++|||||.....++.+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 57 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 136 (256)
T PRK06124 57 AAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKR 136 (256)
T ss_pred hcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 4566788999999999999999999999999999999999987665555554 788888887877777777777766633
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 137 -------------------------------------------------------------------------------- 136 (256)
T PRK06124 137 -------------------------------------------------------------------------------- 136 (256)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
++.++||++||..+... ..+..+|+++|+
T Consensus 137 -----------~~~~~iv~~ss~~~~~~----------------------------------------~~~~~~Y~~sK~ 165 (256)
T PRK06124 137 -----------QGYGRIIAITSIAGQVA----------------------------------------RAGDAVYPAAKQ 165 (256)
T ss_pred -----------cCCcEEEEEeechhccC----------------------------------------CCCccHhHHHHH
Confidence 12356777777665441 223356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.++.++.+. ||+||+|+||+++|++.+.
T Consensus 166 a~~~~~~~la~e~~~~----~i~v~~i~pg~v~t~~~~~ 200 (256)
T PRK06124 166 GLTGLMRALAAEFGPH----GITSNAIAPGYFATETNAA 200 (256)
T ss_pred HHHHHHHHHHHHHHHh----CcEEEEEEECCccCcchhh
Confidence 9999999999888755 9999999999999998654
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.8e-19 Score=164.45 Aligned_cols=139 Identities=27% Similarity=0.295 Sum_probs=110.7
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.++.||++|.++++++++.+.+.+|++|++|||||+.....+.+.+ ++|++++++|+.+++.+++++.|.|++.
T Consensus 51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--- 127 (273)
T PRK07825 51 LVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR--- 127 (273)
T ss_pred cceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---
Confidence 467889999999999999999999999999999999998766665555 7777777777777777777666665431
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 128 -------------------------------------------------------------------------------- 127 (273)
T PRK07825 128 -------------------------------------------------------------------------------- 127 (273)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
+.|+||++||..+... ..+..+|++||+++..
T Consensus 128 --------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asKaa~~~ 159 (273)
T PRK07825 128 --------GRGHVVNVASLAGKIP----------------------------------------VPGMATYCASKHAVVG 159 (273)
T ss_pred --------CCCEEEEEcCccccCC----------------------------------------CCCCcchHHHHHHHHH
Confidence 2267777777776541 2234569999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+++.++.++.+. ||++++|+||+++|++...
T Consensus 160 ~~~~l~~el~~~----gi~v~~v~Pg~v~t~~~~~ 190 (273)
T PRK07825 160 FTDAARLELRGT----GVHVSVVLPSFVNTELIAG 190 (273)
T ss_pred HHHHHHHHhhcc----CcEEEEEeCCcCcchhhcc
Confidence 999988887755 9999999999999998654
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-19 Score=172.89 Aligned_cols=145 Identities=17% Similarity=0.178 Sum_probs=112.8
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.|.++.+++||++|.++++++++.+.+++|++|++|||||+....++.+.+ ++|++++++|+.+++.+++++.+.|+
T Consensus 53 ~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~ 132 (334)
T PRK07109 53 RAAGGEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMR 132 (334)
T ss_pred HHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 44577889999999999999999999999999999999999987666555555 77777777777666666666666554
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 133 ~~------------------------------------------------------------------------------ 134 (334)
T PRK07109 133 PR------------------------------------------------------------------------------ 134 (334)
T ss_pred hc------------------------------------------------------------------------------
Confidence 31
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+.|+||++||..+... ......|++||
T Consensus 135 -------------~~g~iV~isS~~~~~~----------------------------------------~~~~~~Y~asK 161 (334)
T PRK07109 135 -------------DRGAIIQVGSALAYRS----------------------------------------IPLQSAYCAAK 161 (334)
T ss_pred -------------CCcEEEEeCChhhccC----------------------------------------CCcchHHHHHH
Confidence 1366777777766541 12234699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+++..|++.++.++..+ ..+|+|++|+||+|+||+..
T Consensus 162 ~a~~~~~~~l~~el~~~--~~~I~v~~v~Pg~v~T~~~~ 198 (334)
T PRK07109 162 HAIRGFTDSLRCELLHD--GSPVSVTMVQPPAVNTPQFD 198 (334)
T ss_pred HHHHHHHHHHHHHHhhc--CCCeEEEEEeCCCccCchhh
Confidence 99999999999998754 34799999999999999754
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=8e-20 Score=172.00 Aligned_cols=149 Identities=21% Similarity=0.277 Sum_probs=117.7
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+..|.++..++||++|.++++++++.+.+ +|++|+||||||+.....+.+++ ++|++.+++|+.+++.+++++.+.|+
T Consensus 58 ~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~ 136 (306)
T PRK07792 58 RAAGAKAVAVAGDISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWR 136 (306)
T ss_pred HhcCCeEEEEeCCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 34577888999999999999999999998 99999999999998766666665 88899998888888888888887764
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+...-
T Consensus 137 ~~~~~--------------------------------------------------------------------------- 141 (306)
T PRK07792 137 AKAKA--------------------------------------------------------------------------- 141 (306)
T ss_pred Hhhcc---------------------------------------------------------------------------
Confidence 31000
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
..-...|+||++||..+... ..+...|+++|
T Consensus 142 ---------~~~~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 172 (306)
T PRK07792 142 ---------AGGPVYGRIVNTSSEAGLVG----------------------------------------PVGQANYGAAK 172 (306)
T ss_pred ---------cCCCCCcEEEEECCcccccC----------------------------------------CCCCchHHHHH
Confidence 00011378999999887641 22345699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+|+..|++.++.++.+. ||+||+|+|| +.|+|...
T Consensus 173 aal~~l~~~la~e~~~~----gI~vn~i~Pg-~~t~~~~~ 207 (306)
T PRK07792 173 AGITALTLSAARALGRY----GVRANAICPR-ARTAMTAD 207 (306)
T ss_pred HHHHHHHHHHHHHhhhc----CeEEEEECCC-CCCchhhh
Confidence 99999999988888765 9999999999 58988643
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.5e-19 Score=161.95 Aligned_cols=144 Identities=22% Similarity=0.198 Sum_probs=112.1
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.++.||++|++++.++++.+.+.+|++|+||||||.....++.+.+ ++|+..+++|+.+++.+++++.+.|+
T Consensus 50 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 129 (250)
T PRK08063 50 EALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLME 129 (250)
T ss_pred HhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34466788899999999999999999999999999999999987666655555 77777777777777777777776664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 130 ~~------------------------------------------------------------------------------ 131 (250)
T PRK08063 130 KV------------------------------------------------------------------------------ 131 (250)
T ss_pred hc------------------------------------------------------------------------------
Confidence 31
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+.|+||++||..+... ..+...|++||
T Consensus 132 -------------~~g~iv~~sS~~~~~~----------------------------------------~~~~~~y~~sK 158 (250)
T PRK08063 132 -------------GGGKIISLSSLGSIRY----------------------------------------LENYTTVGVSK 158 (250)
T ss_pred -------------CCeEEEEEcchhhccC----------------------------------------CCCccHHHHHH
Confidence 1256666666554321 12334699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+++..+++.++.++.+. ||++|+|+||+++|++...
T Consensus 159 ~a~~~~~~~~~~~~~~~----~i~v~~i~pg~v~t~~~~~ 194 (250)
T PRK08063 159 AALEALTRYLAVELAPK----GIAVNAVSGGAVDTDALKH 194 (250)
T ss_pred HHHHHHHHHHHHHHhHh----CeEEEeEecCcccCchhhh
Confidence 99999999998888765 9999999999999998643
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.7e-19 Score=163.07 Aligned_cols=141 Identities=19% Similarity=0.255 Sum_probs=106.4
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC--CCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR--DTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~--~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.++.+++||++|.++++++++.+.+++|++|+||||||+.. ...+.+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 48 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 127 (260)
T PRK06523 48 PEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIA 127 (260)
T ss_pred CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh
Confidence 345778999999999999999999999999999999999753 22344444 677777777777766666666665543
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 128 ~------------------------------------------------------------------------------- 128 (260)
T PRK06523 128 R------------------------------------------------------------------------------- 128 (260)
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+.|+||++||..+.... ..+..+|+++|+
T Consensus 129 ------------~~g~ii~isS~~~~~~~---------------------------------------~~~~~~Y~~sK~ 157 (260)
T PRK06523 129 ------------GSGVIIHVTSIQRRLPL---------------------------------------PESTTAYAAAKA 157 (260)
T ss_pred ------------CCcEEEEEecccccCCC---------------------------------------CCCcchhHHHHH
Confidence 12566666666554310 112356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
++..|++.++.++.++ ||+||+|+||+|+|++..
T Consensus 158 a~~~l~~~~a~~~~~~----gi~v~~i~Pg~v~t~~~~ 191 (260)
T PRK06523 158 ALSTYSKSLSKEVAPK----GVRVNTVSPGWIETEAAV 191 (260)
T ss_pred HHHHHHHHHHHHHhhc----CcEEEEEecCcccCccHH
Confidence 9999999998888766 999999999999999864
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-19 Score=163.00 Aligned_cols=84 Identities=17% Similarity=0.179 Sum_probs=68.4
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.++++|+++.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.+.|+++
T Consensus 59 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~ 138 (257)
T PRK12744 59 AGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN 138 (257)
T ss_pred hCCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC
Confidence 355788899999999999999999999999999999999997666655555 8899999888888888888777766554
Q ss_pred ceEEE
Q psy2266 86 ARVVN 90 (313)
Q Consensus 86 g~IV~ 90 (313)
+++++
T Consensus 139 ~~iv~ 143 (257)
T PRK12744 139 GKIVT 143 (257)
T ss_pred CCEEE
Confidence 44443
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=3e-19 Score=161.37 Aligned_cols=140 Identities=24% Similarity=0.303 Sum_probs=109.2
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
+..++||++|.++++++++.+.+++|++|++|||||+.....+.+.+ ++|++++++|+.+++.+++++++.|++.
T Consensus 53 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---- 128 (251)
T PRK07069 53 AFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS---- 128 (251)
T ss_pred EEEEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc----
Confidence 45688999999999999999999999999999999997766555554 7777777777777777666666665431
Q ss_pred EEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHH
Q psy2266 90 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCH 169 (313)
Q Consensus 90 ~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 169 (313)
T Consensus 129 -------------------------------------------------------------------------------- 128 (251)
T PRK07069 129 -------------------------------------------------------------------------------- 128 (251)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHH
Q psy2266 170 ILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKL 249 (313)
Q Consensus 170 ~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l 249 (313)
+.++|+++||..+... ..+...|+++|+++..+
T Consensus 129 -------~~~~ii~~ss~~~~~~----------------------------------------~~~~~~Y~~sK~a~~~~ 161 (251)
T PRK07069 129 -------QPASIVNISSVAAFKA----------------------------------------EPDYTAYNASKAAVASL 161 (251)
T ss_pred -------CCcEEEEecChhhccC----------------------------------------CCCCchhHHHHHHHHHH
Confidence 1256777777766541 22335699999999999
Q ss_pred HHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 250 SFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 250 ~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++.++.++.++ ..+|+|++|+||+++|++...
T Consensus 162 ~~~la~e~~~~--~~~i~v~~v~pg~v~t~~~~~ 193 (251)
T PRK07069 162 TKSIALDCARR--GLDVRCNSIHPTFIRTGIVDP 193 (251)
T ss_pred HHHHHHHhccc--CCcEEEEEEeecccCCcchhH
Confidence 99999998765 346999999999999998754
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.3e-19 Score=160.26 Aligned_cols=145 Identities=22% Similarity=0.286 Sum_probs=111.0
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+.+.++.++.||++|.++++++++.+.+++|++|+||||||..... .+.+.+ ++|++++++|+.+++.+++++.+.|+
T Consensus 49 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 128 (248)
T PRK06123 49 RQGGEALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMS 128 (248)
T ss_pred hCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3456678899999999999999999999999999999999987543 444444 78888888888888777777777654
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+..+
T Consensus 129 ~~~~---------------------------------------------------------------------------- 132 (248)
T PRK06123 129 TRHG---------------------------------------------------------------------------- 132 (248)
T ss_pred hcCC----------------------------------------------------------------------------
Confidence 3100
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCC-CCchhhh
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWP-EFSYSVS 242 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~s 242 (313)
.++|+|+++||..+... ... ...|+++
T Consensus 133 ------------~~~g~iv~~sS~~~~~~----------------------------------------~~~~~~~Y~~s 160 (248)
T PRK06123 133 ------------GRGGAIVNVSSMAARLG----------------------------------------SPGEYIDYAAS 160 (248)
T ss_pred ------------CCCeEEEEECchhhcCC----------------------------------------CCCCccchHHH
Confidence 01256777777765431 111 1359999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
|+++..+++.++.++.+. ||+|++|+||++.|++..
T Consensus 161 Kaa~~~~~~~la~~~~~~----~i~v~~i~pg~v~~~~~~ 196 (248)
T PRK06123 161 KGAIDTMTIGLAKEVAAE----GIRVNAVRPGVIYTEIHA 196 (248)
T ss_pred HHHHHHHHHHHHHHhccc----CeEEEEEecCcccCchhh
Confidence 999999999988888765 999999999999999754
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-19 Score=160.97 Aligned_cols=80 Identities=18% Similarity=0.148 Sum_probs=55.5
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--C----CCCChhHHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD--T----APGSFGQRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~--~----~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+++||++|+++++++++.+.+ ++|+||||||.... . .+.+..++|++++++|+.+++.++|++.|.|++
T Consensus 46 ~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~ 122 (223)
T PRK05884 46 VDAIVCDNTDPASLEEARGLFPH---HLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRS 122 (223)
T ss_pred CcEEecCCCCHHHHHHHHHHHhh---cCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 56789999999999998887653 69999999996321 1 222223677888877777777777776666654
Q ss_pred CceEEEEec
Q psy2266 85 HARVVNVAS 93 (313)
Q Consensus 85 ~g~IV~isS 93 (313)
+|+||+++|
T Consensus 123 ~g~Iv~isS 131 (223)
T PRK05884 123 GGSIISVVP 131 (223)
T ss_pred CCeEEEEec
Confidence 444444443
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.3e-19 Score=163.50 Aligned_cols=142 Identities=21% Similarity=0.269 Sum_probs=109.3
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.++++|++|+++++++++.+.+++|++|+||||||.....++.+.+ ++|+.++++|+.+++.+++++.+.|.+.
T Consensus 50 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (257)
T PRK07067 50 IGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQ 129 (257)
T ss_pred hCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhc
Confidence 345678899999999999999999999999999999999987655555554 7777777777777777776666655321
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 130 -------------------------------------------------------------------------------- 129 (257)
T PRK07067 130 -------------------------------------------------------------------------------- 129 (257)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
..+|+||++||..+.. +..+..+|++||++
T Consensus 130 ----------~~~~~iv~~sS~~~~~----------------------------------------~~~~~~~Y~~sK~a 159 (257)
T PRK07067 130 ----------GRGGKIINMASQAGRR----------------------------------------GEALVSHYCATKAA 159 (257)
T ss_pred ----------CCCcEEEEeCCHHhCC----------------------------------------CCCCCchhhhhHHH
Confidence 0125667777765543 12234569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+..+++.++.++.+. ||+||+|.||+|+|++..
T Consensus 160 ~~~~~~~la~e~~~~----gi~v~~i~pg~v~t~~~~ 192 (257)
T PRK07067 160 VISYTQSAALALIRH----GINVNAIAPGVVDTPMWD 192 (257)
T ss_pred HHHHHHHHHHHhccc----CeEEEEEeeCcccchhhh
Confidence 999999988888765 999999999999999754
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.3e-19 Score=164.13 Aligned_cols=138 Identities=25% Similarity=0.360 Sum_probs=107.2
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.+.++.||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|+..+++|+.+++.+++++.|.|++.
T Consensus 47 ~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~--- 123 (273)
T PRK06182 47 GVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ--- 123 (273)
T ss_pred CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc---
Confidence 367889999999999999999999999999999999998766665555 7777777777777666666666655431
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 124 -------------------------------------------------------------------------------- 123 (273)
T PRK06182 124 -------------------------------------------------------------------------------- 123 (273)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
+.|+||++||..+..+ ......|++||+++..
T Consensus 124 --------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sKaa~~~ 155 (273)
T PRK06182 124 --------RSGRIINISSMGGKIY----------------------------------------TPLGAWYHATKFALEG 155 (273)
T ss_pred --------CCCEEEEEcchhhcCC----------------------------------------CCCccHhHHHHHHHHH
Confidence 1256777777655431 1122359999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+++.++.++.+. ||++++|+||+|+|++..
T Consensus 156 ~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~ 185 (273)
T PRK06182 156 FSDALRLEVAPF----GIDVVVIEPGGIKTEWGD 185 (273)
T ss_pred HHHHHHHHhccc----CCEEEEEecCCcccccch
Confidence 999988887655 999999999999999853
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.5e-19 Score=162.70 Aligned_cols=171 Identities=19% Similarity=0.155 Sum_probs=118.8
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++|.+|+.+++..... .......+|..+.++++++++.+. |++|+||||||.... ++|+.++++|+.
T Consensus 7 ~~G~~Vv~~~r~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~----~~~~~~~~vN~~ 73 (241)
T PRK12428 7 FLGARVIGVDRREPGM------TLDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT----APVELVARVNFL 73 (241)
T ss_pred hCCCEEEEEeCCcchh------hhhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC----CCHHHhhhhchH
Confidence 4577888776644322 122335678889999999988774 799999999997632 468999999999
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
|++.+++.++|.|+++|+||++||.++.......... ....+..+....+ ......+..+..+|++|
T Consensus 74 ~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~-----~~~~~~~~~~~~~--------~~~~~~~~~~~~~Y~~s 140 (241)
T PRK12428 74 GLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELH-----KALAATASFDEGA--------AWLAAHPVALATGYQLS 140 (241)
T ss_pred HHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHH-----HhhhccchHHHHH--------HhhhccCCCcccHHHHH
Confidence 9999999999999888999999999875321100000 0000000000000 00000122334569999
Q ss_pred HHHHHHHHHHHH-hhhccCCCCCCeEEEeecccccccccccc
Q psy2266 243 KLGVAKLSFIQH-ATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 243 K~al~~l~~~~~-~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|+|+..+++.++ .++++. ||+||+|+||+|+|+|.++
T Consensus 141 K~a~~~~~~~la~~e~~~~----girvn~v~PG~v~T~~~~~ 178 (241)
T PRK12428 141 KEALILWTMRQAQPWFGAR----GIRVNCVAPGPVFTPILGD 178 (241)
T ss_pred HHHHHHHHHHHHHHhhhcc----CeEEEEeecCCccCccccc
Confidence 999999999888 777655 9999999999999999765
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5e-19 Score=161.32 Aligned_cols=141 Identities=17% Similarity=0.225 Sum_probs=110.1
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.+++++.||+++.++++++++.+.+++|++|++|||||+....+..+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 65 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~- 143 (256)
T PRK12748 65 YGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDG- 143 (256)
T ss_pred cCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhh-
Confidence 456789999999999999999999999999999999999987655555544 777777777777777777776665533
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 144 -------------------------------------------------------------------------------- 143 (256)
T PRK12748 144 -------------------------------------------------------------------------------- 143 (256)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+..++||++||..+..+ ..+..+|++||++
T Consensus 144 ----------~~~~~iv~~ss~~~~~~----------------------------------------~~~~~~Y~~sK~a 173 (256)
T PRK12748 144 ----------KAGGRIINLTSGQSLGP----------------------------------------MPDELAYAATKGA 173 (256)
T ss_pred ----------cCCeEEEEECCccccCC----------------------------------------CCCchHHHHHHHH
Confidence 12256677776655331 1233569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+..+++.++.++... ||+|++|+||+++|++..
T Consensus 174 ~~~~~~~la~e~~~~----~i~v~~i~Pg~~~t~~~~ 206 (256)
T PRK12748 174 IEAFTKSLAPELAEK----GITVNAVNPGPTDTGWIT 206 (256)
T ss_pred HHHHHHHHHHHHHHh----CeEEEEEEeCcccCCCCC
Confidence 999999999988755 999999999999998643
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.6e-19 Score=162.91 Aligned_cols=143 Identities=29% Similarity=0.466 Sum_probs=111.4
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.+++||++++++++++++.+.++++++|+||||||+.....+.+.+ ++|++++++|+.+++.+++++.|.|++
T Consensus 46 ~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 125 (270)
T PRK05650 46 EAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKR 125 (270)
T ss_pred hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh
Confidence 4466788899999999999999999999999999999999998766555555 677777766666666666665555533
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 126 ~------------------------------------------------------------------------------- 126 (270)
T PRK05650 126 Q------------------------------------------------------------------------------- 126 (270)
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+.++||++||..+... ..+...|+++|+
T Consensus 127 ------------~~~~iv~vsS~~~~~~----------------------------------------~~~~~~Y~~sKa 154 (270)
T PRK05650 127 ------------KSGRIVNIASMAGLMQ----------------------------------------GPAMSSYNVAKA 154 (270)
T ss_pred ------------CCCEEEEECChhhcCC----------------------------------------CCCchHHHHHHH
Confidence 1256777777766541 223356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++.++++.++.++... ||++++|+||+++|++...
T Consensus 155 a~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~~ 189 (270)
T PRK05650 155 GVVALSETLLVELADD----EIGVHVVCPSFFQTNLLDS 189 (270)
T ss_pred HHHHHHHHHHHHhccc----CcEEEEEecCccccCcccc
Confidence 9999999999888766 9999999999999998664
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.4e-19 Score=160.09 Aligned_cols=88 Identities=20% Similarity=0.219 Sum_probs=71.4
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.+++||++|.+++.++++.+.+.+|++|++|||||.....++.+.+ ++|+..+++|+.+++.+++++.|.|++
T Consensus 49 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 128 (249)
T PRK06500 49 ELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN 128 (249)
T ss_pred HhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc
Confidence 3466788899999999999999999999999999999999987655555555 899999988888888888888777655
Q ss_pred CceEEEEec
Q psy2266 85 HARVVNVAS 93 (313)
Q Consensus 85 ~g~IV~isS 93 (313)
++++|+++|
T Consensus 129 ~~~~i~~~S 137 (249)
T PRK06500 129 PASIVLNGS 137 (249)
T ss_pred CCEEEEEec
Confidence 445554444
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.4e-19 Score=161.01 Aligned_cols=78 Identities=27% Similarity=0.313 Sum_probs=61.2
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD--TAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~--~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
+.+.++.++++|+++.+++.++++.+.+++|++|+||||||+... .++.+.+ ++|+..+++|+.+++.+++++.|.|
T Consensus 53 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 132 (255)
T PRK05717 53 ALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYL 132 (255)
T ss_pred HcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 345678889999999999999999999999999999999998753 2444444 7777777777777777777666655
Q ss_pred c
Q psy2266 83 R 83 (313)
Q Consensus 83 ~ 83 (313)
+
T Consensus 133 ~ 133 (255)
T PRK05717 133 R 133 (255)
T ss_pred H
Confidence 3
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.1e-19 Score=162.30 Aligned_cols=139 Identities=27% Similarity=0.413 Sum_probs=111.0
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.+++||++|.++++++++.+.+++|++|+||||||+.....+.+.+ ++|++++++|+.+++.+++++.+.|++.
T Consensus 46 ~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--- 122 (270)
T PRK06179 46 GVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ--- 122 (270)
T ss_pred CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---
Confidence 567899999999999999999999999999999999998766666655 7778888777777777777666665441
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 123 -------------------------------------------------------------------------------- 122 (270)
T PRK06179 123 -------------------------------------------------------------------------------- 122 (270)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
+.|+||++||..+... ......|++||+++..
T Consensus 123 --------~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~~ 154 (270)
T PRK06179 123 --------GSGRIINISSVLGFLP----------------------------------------APYMALYAASKHAVEG 154 (270)
T ss_pred --------CCceEEEECCccccCC----------------------------------------CCCccHHHHHHHHHHH
Confidence 1266777777666441 1223469999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+++.++.++++. ||++++|+||+++|++...
T Consensus 155 ~~~~l~~el~~~----gi~v~~v~pg~~~t~~~~~ 185 (270)
T PRK06179 155 YSESLDHEVRQF----GIRVSLVEPAYTKTNFDAN 185 (270)
T ss_pred HHHHHHHHHhhh----CcEEEEEeCCCcccccccc
Confidence 999998888765 9999999999999998764
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.1e-19 Score=164.67 Aligned_cols=143 Identities=19% Similarity=0.209 Sum_probs=107.1
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCh--h-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF--G-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~--~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
.+.++.++++|++|.+++.++++.+.+.+|++|++|||||+.....+.+. . ++++.++++|+.+++.+++++.|.|+
T Consensus 87 ~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 166 (293)
T PRK05866 87 AGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGML 166 (293)
T ss_pred cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46678889999999999999999999999999999999999765544332 1 56666776666666666666666554
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 167 ~~------------------------------------------------------------------------------ 168 (293)
T PRK05866 167 ER------------------------------------------------------------------------------ 168 (293)
T ss_pred hc------------------------------------------------------------------------------
Confidence 31
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
..|+||++||..+.... .....+|++||
T Consensus 169 -------------~~g~iv~isS~~~~~~~---------------------------------------~p~~~~Y~asK 196 (293)
T PRK05866 169 -------------GDGHIINVATWGVLSEA---------------------------------------SPLFSVYNASK 196 (293)
T ss_pred -------------CCcEEEEECChhhcCCC---------------------------------------CCCcchHHHHH
Confidence 12566666664432100 12234699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+|+.++++.++.++... ||+|++|+||+|+|++...
T Consensus 197 aal~~l~~~la~e~~~~----gI~v~~v~pg~v~T~~~~~ 232 (293)
T PRK05866 197 AALSAVSRVIETEWGDR----GVHSTTLYYPLVATPMIAP 232 (293)
T ss_pred HHHHHHHHHHHHHhccc----CcEEEEEEcCcccCccccc
Confidence 99999999988888765 9999999999999999753
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.9e-19 Score=161.09 Aligned_cols=139 Identities=24% Similarity=0.298 Sum_probs=105.0
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCC-hh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGS-FG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~-~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
++.+++||++|.++++++++.+.+++|++|+||||||+.......+ .+ ++|+.++++|+.+++.+++++.|.|++
T Consensus 51 ~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~--- 127 (257)
T PRK07024 51 RVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRA--- 127 (257)
T ss_pred eeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHh---
Confidence 6888999999999999999999999999999999999865432222 33 566666666666665555555554433
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 128 -------------------------------------------------------------------------------- 127 (257)
T PRK07024 128 -------------------------------------------------------------------------------- 127 (257)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
++.|+||++||.++... ......|++||+++.
T Consensus 128 --------~~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK~a~~ 159 (257)
T PRK07024 128 --------ARRGTLVGIASVAGVRG----------------------------------------LPGAGAYSASKAAAI 159 (257)
T ss_pred --------cCCCEEEEEechhhcCC----------------------------------------CCCCcchHHHHHHHH
Confidence 12367788888776541 123346999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.+++.++.++... ||+|++|+||+|+|++...
T Consensus 160 ~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~~ 191 (257)
T PRK07024 160 KYLESLRVELRPA----GVRVVTIAPGYIRTPMTAH 191 (257)
T ss_pred HHHHHHHHHhhcc----CcEEEEEecCCCcCchhhc
Confidence 9998888887755 9999999999999998654
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=8e-19 Score=158.87 Aligned_cols=141 Identities=24% Similarity=0.325 Sum_probs=110.5
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++..+++|++++++++++++.+.+++|++|++|||||+....+..+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 47 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-- 124 (252)
T PRK08220 47 DYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRR-- 124 (252)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--
Confidence 55678899999999999999999999999999999999987666555554 777777777777777777776666543
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 125 -------------------------------------------------------------------------------- 124 (252)
T PRK08220 125 -------------------------------------------------------------------------------- 124 (252)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
++.|+|+++||..+.. +..+..+|++||+++
T Consensus 125 ---------~~~g~iv~~ss~~~~~----------------------------------------~~~~~~~Y~~sK~a~ 155 (252)
T PRK08220 125 ---------QRSGAIVTVGSNAAHV----------------------------------------PRIGMAAYGASKAAL 155 (252)
T ss_pred ---------CCCCEEEEECCchhcc----------------------------------------CCCCCchhHHHHHHH
Confidence 1125566666655432 112335699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+++.+++++.+. ||+||+|.||+|.|++...
T Consensus 156 ~~~~~~la~e~~~~----~i~v~~i~pg~v~t~~~~~ 188 (252)
T PRK08220 156 TSLAKCVGLELAPY----GVRCNVVSPGSTDTDMQRT 188 (252)
T ss_pred HHHHHHHHHHhhHh----CeEEEEEecCcCcchhhhh
Confidence 99999999888755 9999999999999998654
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.3e-19 Score=163.89 Aligned_cols=87 Identities=20% Similarity=0.312 Sum_probs=69.9
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++.++.||+++.++++++++.+.+.++++|+||||||.... ..+.+.+ ++|.+.+++|+.+++.+++++.+.|++
T Consensus 94 ~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~ 173 (290)
T PRK06701 94 EGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ 173 (290)
T ss_pred cCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Confidence 35678889999999999999999999999999999999998643 3555555 899999999988888888887776654
Q ss_pred CceEEEEec
Q psy2266 85 HARVVNVAS 93 (313)
Q Consensus 85 ~g~IV~isS 93 (313)
+++||+++|
T Consensus 174 ~g~iV~isS 182 (290)
T PRK06701 174 GSAIINTGS 182 (290)
T ss_pred CCeEEEEec
Confidence 444444444
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.1e-19 Score=159.06 Aligned_cols=145 Identities=23% Similarity=0.275 Sum_probs=109.5
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++.+++||+++.++++++++.+.+.++++|+||||||+.... .+.+.+ ++|+.++++|+.+++.+++++.+.|..
T Consensus 50 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 129 (248)
T PRK06947 50 AGGRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLST 129 (248)
T ss_pred cCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 456788999999999999999999999999999999999986543 344443 777777777777777777666665432
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.+.
T Consensus 130 ~~~----------------------------------------------------------------------------- 132 (248)
T PRK06947 130 DRG----------------------------------------------------------------------------- 132 (248)
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 100
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.++++||++||..+.... .....+|++||+
T Consensus 133 -----------~~~~~ii~~sS~~~~~~~---------------------------------------~~~~~~Y~~sK~ 162 (248)
T PRK06947 133 -----------GRGGAIVNVSSIASRLGS---------------------------------------PNEYVDYAGSKG 162 (248)
T ss_pred -----------CCCcEEEEECchhhcCCC---------------------------------------CCCCcccHhhHH
Confidence 113678888887765411 011246999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
++..+++.++.++.+. ||+|+.|+||+++|++..
T Consensus 163 ~~~~~~~~la~~~~~~----~i~v~~i~Pg~v~t~~~~ 196 (248)
T PRK06947 163 AVDTLTLGLAKELGPH----GVRVNAVRPGLIETEIHA 196 (248)
T ss_pred HHHHHHHHHHHHhhhh----CcEEEEEeccCccccccc
Confidence 9999999988887755 999999999999999864
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=5e-19 Score=159.18 Aligned_cols=142 Identities=23% Similarity=0.355 Sum_probs=108.5
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.++.+|+++.++++++++.+.++++++|++|||||........+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 50 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~- 128 (245)
T PRK12936 50 LGERVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMR- 128 (245)
T ss_pred hCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHH-
Confidence 355678889999999999999999999999999999999997655444443 667777766666666666665554322
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 129 -------------------------------------------------------------------------------- 128 (245)
T PRK12936 129 -------------------------------------------------------------------------------- 128 (245)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
++.++||++||..+... .....+|+++|+|
T Consensus 129 ----------~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sk~a 158 (245)
T PRK12936 129 ----------RRYGRIINITSVVGVTG----------------------------------------NPGQANYCASKAG 158 (245)
T ss_pred ----------hCCCEEEEECCHHhCcC----------------------------------------CCCCcchHHHHHH
Confidence 12367777777666541 2233569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.+++++... ||++++|+||+++|++...
T Consensus 159 ~~~~~~~la~~~~~~----~i~v~~i~pg~~~t~~~~~ 192 (245)
T PRK12936 159 MIGFSKSLAQEIATR----NVTVNCVAPGFIESAMTGK 192 (245)
T ss_pred HHHHHHHHHHHhhHh----CeEEEEEEECcCcCchhcc
Confidence 999999998887655 9999999999999998654
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.3e-19 Score=158.97 Aligned_cols=144 Identities=22% Similarity=0.254 Sum_probs=113.2
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
..+.++.++.||++|++++.++++.+.+++|++|+||||||.....++.+.+ ++|++++++|+.+++.+++++.+.|++
T Consensus 46 ~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 125 (254)
T TIGR02415 46 QAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKK 125 (254)
T ss_pred hcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 3456788899999999999999999999999999999999997766555555 777888877777777777776666543
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 126 ~------------------------------------------------------------------------------- 126 (254)
T TIGR02415 126 Q------------------------------------------------------------------------------- 126 (254)
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+.+++|+++||..+... ......|+++|+
T Consensus 127 -----------~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~ 155 (254)
T TIGR02415 127 -----------GHGGKIINAASIAGHEG----------------------------------------NPILSAYSSTKF 155 (254)
T ss_pred -----------CCCeEEEEecchhhcCC----------------------------------------CCCCcchHHHHH
Confidence 11256777777666541 223456999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.+++++.+. ||+|++|+||+++|++.+.
T Consensus 156 a~~~~~~~l~~~~~~~----~i~v~~v~Pg~i~t~~~~~ 190 (254)
T TIGR02415 156 AVRGLTQTAAQELAPK----GITVNAYCPGIVKTPMWEE 190 (254)
T ss_pred HHHHHHHHHHHHhccc----CeEEEEEecCcccChhhhh
Confidence 9999999888887755 9999999999999998654
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.2e-19 Score=158.91 Aligned_cols=137 Identities=26% Similarity=0.412 Sum_probs=111.3
Q ss_pred CceeEEEeecCC-HHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 9 NNVRFHQLDILD-QSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 9 ~~~~~~~~Dvs~-~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
..+....+|+++ .++++.+++.+.+.+|++|+||||||+.... ++.+++ ++|++++++|+.+++.+++++.|.|++.
T Consensus 57 ~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 136 (251)
T COG1028 57 GRAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ 136 (251)
T ss_pred CcEEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC
Confidence 357778899998 9999999999999999999999999998863 666666 9999999888888888877656655432
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 137 -------------------------------------------------------------------------------- 136 (251)
T COG1028 137 -------------------------------------------------------------------------------- 136 (251)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCC-CCchhhhHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWP-EFSYSVSKL 244 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~ 244 (313)
+||++||..+. .. .+ ..+|++||+
T Consensus 137 --------------~Iv~isS~~~~-~~----------------------------------------~~~~~~Y~~sK~ 161 (251)
T COG1028 137 --------------RIVNISSVAGL-GG----------------------------------------PPGQAAYAASKA 161 (251)
T ss_pred --------------eEEEECCchhc-CC----------------------------------------CCCcchHHHHHH
Confidence 56666666654 21 12 256999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
|+.+|++.++.++.+. ||++|+|+||+++|++.+..
T Consensus 162 al~~~~~~l~~e~~~~----gi~v~~v~PG~~~t~~~~~~ 197 (251)
T COG1028 162 ALIGLTKALALELAPR----GIRVNAVAPGYIDTPMTAAL 197 (251)
T ss_pred HHHHHHHHHHHHHhhh----CcEEEEEEeccCCCcchhhh
Confidence 9999999988777665 99999999999999998753
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.3e-19 Score=154.52 Aligned_cols=77 Identities=21% Similarity=0.214 Sum_probs=59.3
Q ss_pred EEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEE
Q psy2266 13 FHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNV 91 (313)
Q Consensus 13 ~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~i 91 (313)
.++||++|.++++++++. +|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.|.|+++++|+++
T Consensus 35 ~~~~D~~~~~~~~~~~~~----~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 110 (199)
T PRK07578 35 DVQVDITDPASIRALFEK----VGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLT 110 (199)
T ss_pred ceEecCCChHHHHHHHHh----cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 468999999999887764 58999999999987666665555 8899999888888888888777766554444444
Q ss_pred ec
Q psy2266 92 AS 93 (313)
Q Consensus 92 sS 93 (313)
+|
T Consensus 111 ss 112 (199)
T PRK07578 111 SG 112 (199)
T ss_pred cc
Confidence 43
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.9e-19 Score=166.35 Aligned_cols=139 Identities=17% Similarity=0.202 Sum_probs=98.3
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCC--CcEEEECCCCCCC--CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGG--LDLLVNNAGIYRD--TAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~--iDilVnNAGi~~~--~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
.++..+.+|+++ ++.+.++.+.+.+++ +|+||||||+... ..+.+.+ ++|++++++|+.+++.+++++.|.|+
T Consensus 104 ~~~~~~~~Dl~~--~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~ 181 (320)
T PLN02780 104 TQIKTVVVDFSG--DIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGML 181 (320)
T ss_pred cEEEEEEEECCC--CcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 467788999985 334445555555554 6699999998753 2445554 77777777777777766666666553
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 182 ~------------------------------------------------------------------------------- 182 (320)
T PLN02780 182 K------------------------------------------------------------------------------- 182 (320)
T ss_pred h-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+++|+||++||.++...+ ..+...+|++||
T Consensus 183 ------------~~~g~IV~iSS~a~~~~~--------------------------------------~~p~~~~Y~aSK 212 (320)
T PLN02780 183 ------------RKKGAIINIGSGAAIVIP--------------------------------------SDPLYAVYAATK 212 (320)
T ss_pred ------------cCCcEEEEEechhhccCC--------------------------------------CCccchHHHHHH
Confidence 123667777776664210 012235699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+++..+++.++.|+++. ||+|++|+||+|+|+|..
T Consensus 213 aal~~~~~~L~~El~~~----gI~V~~v~PG~v~T~~~~ 247 (320)
T PLN02780 213 AYIDQFSRCLYVEYKKS----GIDVQCQVPLYVATKMAS 247 (320)
T ss_pred HHHHHHHHHHHHHHhcc----CeEEEEEeeCceecCccc
Confidence 99999999999998766 999999999999999976
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-18 Score=161.14 Aligned_cols=140 Identities=24% Similarity=0.289 Sum_probs=110.7
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.++.+|++|++++.++++.+.+.+|++|+||||||+....+..+.+ ++|++++++|+.+++.+++++.|.|++.
T Consensus 49 ~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~- 127 (277)
T PRK06180 49 PDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRAR- 127 (277)
T ss_pred CCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-
Confidence 45678899999999999999999999999999999999997666555555 7788888777777777777766665431
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 128 -------------------------------------------------------------------------------- 127 (277)
T PRK06180 128 -------------------------------------------------------------------------------- 127 (277)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+.++||++||..+... ..+...|+++|+++
T Consensus 128 ----------~~~~iv~iSS~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 157 (277)
T PRK06180 128 ----------RRGHIVNITSMGGLIT----------------------------------------MPGIGYYCGSKFAL 157 (277)
T ss_pred ----------CCCEEEEEecccccCC----------------------------------------CCCcchhHHHHHHH
Confidence 1256777777666541 22345699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
..+++.++.++.+. ||++++|+||+++|++..
T Consensus 158 ~~~~~~la~e~~~~----gi~v~~i~Pg~v~t~~~~ 189 (277)
T PRK06180 158 EGISESLAKEVAPF----GIHVTAVEPGSFRTDWAG 189 (277)
T ss_pred HHHHHHHHHHhhhh----CcEEEEEecCCcccCccc
Confidence 99999888887655 999999999999999754
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-18 Score=158.18 Aligned_cols=172 Identities=24% Similarity=0.280 Sum_probs=126.6
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.++.+|+++.++++++++.+.+.+|++|++|||||+.....+.+.+ ++|+.++++|+.+++.+++++.+.|++.
T Consensus 56 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (258)
T PRK06949 56 EGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIAR 135 (258)
T ss_pred cCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc
Confidence 345688899999999999999999999999999999999987655555544 7888888888888888888887776542
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
..=
T Consensus 136 ~~~----------------------------------------------------------------------------- 138 (258)
T PRK06949 136 AKG----------------------------------------------------------------------------- 138 (258)
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 100
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
.|.....|+||++||..+... .....+|+++|++
T Consensus 139 ------~~~~~~~g~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~a 172 (258)
T PRK06949 139 ------AGNTKPGGRIINIASVAGLRV----------------------------------------LPQIGLYCMSKAA 172 (258)
T ss_pred ------CCCCCCCeEEEEECcccccCC----------------------------------------CCCccHHHHHHHH
Confidence 000122478899998876541 1233569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+..+++.++.++.+. ||+||+|+||+|+|++..... ..+.........|.+|+++.
T Consensus 173 ~~~~~~~la~~~~~~----~i~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~p 228 (258)
T PRK06949 173 VVHMTRAMALEWGRH----GINVNAICPGYIDTEINHHHW--ETEQGQKLVSMLPRKRVGKP 228 (258)
T ss_pred HHHHHHHHHHHHHhc----CeEEEEEeeCCCcCCcchhcc--ChHHHHHHHhcCCCCCCcCH
Confidence 999999988888755 999999999999999976421 11222333445566776654
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-18 Score=159.47 Aligned_cols=137 Identities=33% Similarity=0.434 Sum_probs=106.6
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
+..+.||+++.++++++++.+.+.++++|++|||||+.....+.+.+ ++|++.+++|+.+++.+++++.|.|+++
T Consensus 46 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---- 121 (274)
T PRK05693 46 FTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS---- 121 (274)
T ss_pred CeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc----
Confidence 56788999999999999999999999999999999987655555554 7777777777777777666666655331
Q ss_pred EEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHH
Q psy2266 90 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCH 169 (313)
Q Consensus 90 ~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 169 (313)
T Consensus 122 -------------------------------------------------------------------------------- 121 (274)
T PRK05693 122 -------------------------------------------------------------------------------- 121 (274)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHH
Q psy2266 170 ILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKL 249 (313)
Q Consensus 170 ~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l 249 (313)
.|+||++||..+... ......|++||+++..+
T Consensus 122 --------~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~al~~~ 153 (274)
T PRK05693 122 --------RGLVVNIGSVSGVLV----------------------------------------TPFAGAYCASKAAVHAL 153 (274)
T ss_pred --------CCEEEEECCccccCC----------------------------------------CCCccHHHHHHHHHHHH
Confidence 255666666655431 12234699999999999
Q ss_pred HHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 250 SFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 250 ~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++.++.++++. ||+|++|+||+|+|++.+.
T Consensus 154 ~~~l~~e~~~~----gi~v~~v~pg~v~t~~~~~ 183 (274)
T PRK05693 154 SDALRLELAPF----GVQVMEVQPGAIASQFASN 183 (274)
T ss_pred HHHHHHHhhhh----CeEEEEEecCccccccccc
Confidence 99988887765 9999999999999998765
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=159.60 Aligned_cols=139 Identities=19% Similarity=0.251 Sum_probs=105.4
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.++.||++++++++++++.+.+.++++|++|||||.....++.+.+ ++|++++++|+.+++.+++++.+.|++
T Consensus 56 ~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~- 134 (264)
T PRK07576 56 AGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRR- 134 (264)
T ss_pred hCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-
Confidence 345678889999999999999999999999999999999976555555544 677777766666666666665554432
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 135 -------------------------------------------------------------------------------- 134 (264)
T PRK07576 135 -------------------------------------------------------------------------------- 134 (264)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
++|+|+++||..+.. +..+...|+++|++
T Consensus 135 -----------~~g~iv~iss~~~~~----------------------------------------~~~~~~~Y~asK~a 163 (264)
T PRK07576 135 -----------PGASIIQISAPQAFV----------------------------------------PMPMQAHVCAAKAG 163 (264)
T ss_pred -----------CCCEEEEECChhhcc----------------------------------------CCCCccHHHHHHHH
Confidence 235667777765543 12233569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccc-cccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVN-TDLT 281 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~-T~~~ 281 (313)
+..|++.++.++..+ ||+|++|+||+++ |+..
T Consensus 164 ~~~l~~~la~e~~~~----gi~v~~v~pg~~~~t~~~ 196 (264)
T PRK07576 164 VDMLTRTLALEWGPE----GIRVNSIVPGPIAGTEGM 196 (264)
T ss_pred HHHHHHHHHHHhhhc----CeEEEEEecccccCcHHH
Confidence 999999998888765 9999999999997 6643
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-18 Score=158.40 Aligned_cols=160 Identities=24% Similarity=0.314 Sum_probs=109.0
Q ss_pred eEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD--TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 12 ~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~--~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
..++||++++++++++++.+.+.++++|++|||||.... ..+.+.+ +.|++.+++|+.+++.+++++.|.|++
T Consensus 54 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~---- 129 (255)
T PRK06057 54 LFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVR---- 129 (255)
T ss_pred cEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHH----
Confidence 578999999999999999999999999999999998643 2333333 556666655555555555554444422
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 130 -------------------------------------------------------------------------------- 129 (255)
T PRK06057 130 -------------------------------------------------------------------------------- 129 (255)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
++.|+||++||..+.... ..+...|+++|+++..
T Consensus 130 -------~~~g~iv~~sS~~~~~g~---------------------------------------~~~~~~Y~~sKaal~~ 163 (255)
T PRK06057 130 -------QGKGSIINTASFVAVMGS---------------------------------------ATSQISYTASKGGVLA 163 (255)
T ss_pred -------hCCcEEEEEcchhhccCC---------------------------------------CCCCcchHHHHHHHHH
Confidence 123677777776554311 1123469999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCC
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTN 305 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~ 305 (313)
+++.++.++.++ ||+|++|+||+++|++........++.........|+++++
T Consensus 164 ~~~~l~~~~~~~----gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (255)
T PRK06057 164 MSRELGVQFARQ----GIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFA 216 (255)
T ss_pred HHHHHHHHHHhh----CcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCc
Confidence 999998888766 99999999999999987654222233322223344555443
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=158.21 Aligned_cols=140 Identities=21% Similarity=0.251 Sum_probs=107.7
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.++.++.||+++.++++++++.+.+.++++|++|||||......+.+.. ++|++++++|+.+++.++|++.+.|++.+
T Consensus 53 ~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~- 131 (259)
T PRK12384 53 GMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDG- 131 (259)
T ss_pred ceeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC-
Confidence 4688999999999999999999999999999999999988766555555 77777777777777776666666553310
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 132 -------------------------------------------------------------------------------- 131 (259)
T PRK12384 132 -------------------------------------------------------------------------------- 131 (259)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
..++||++||..+... .....+|++||+|+.
T Consensus 132 ---------~~~~iv~~ss~~~~~~----------------------------------------~~~~~~Y~~sKaa~~ 162 (259)
T PRK12384 132 ---------IQGRIIQINSKSGKVG----------------------------------------SKHNSGYSAAKFGGV 162 (259)
T ss_pred ---------CCcEEEEecCcccccC----------------------------------------CCCCchhHHHHHHHH
Confidence 0256777777655431 122346999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeeccccc-cccccc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYV-NTDLTE 282 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v-~T~~~~ 282 (313)
.+++.++++++++ ||+||+|.||.+ .|++..
T Consensus 163 ~l~~~la~e~~~~----gi~v~~v~pg~~~~~~~~~ 194 (259)
T PRK12384 163 GLTQSLALDLAEY----GITVHSLMLGNLLKSPMFQ 194 (259)
T ss_pred HHHHHHHHHHHHc----CcEEEEEecCCcccchhhh
Confidence 9999999998766 999999999974 777654
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-18 Score=163.82 Aligned_cols=91 Identities=24% Similarity=0.355 Sum_probs=77.4
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC-
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFG-QRAETTLATNFFALVTVCHILFPLLRP- 84 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~- 84 (313)
+.++.++.||++|.++++++++.+.+.+|+||+||||||+.... .....+ ++|+.++++|+.+++.+++++.|.|++
T Consensus 52 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~ 131 (314)
T TIGR01289 52 KDSYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNS 131 (314)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhC
Confidence 45677889999999999999999988899999999999986432 223334 899999999999999999999999964
Q ss_pred ---CceEEEEecccccc
Q psy2266 85 ---HARVVNVASKLGML 98 (313)
Q Consensus 85 ---~g~IV~isS~~~~~ 98 (313)
.++||++||..+..
T Consensus 132 ~~~~g~IV~vsS~~~~~ 148 (314)
T TIGR01289 132 PNKDKRLIIVGSITGNT 148 (314)
T ss_pred CCCCCeEEEEecCcccc
Confidence 27999999987643
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-18 Score=160.56 Aligned_cols=149 Identities=24% Similarity=0.234 Sum_probs=115.0
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.++.+|++|.++++++++.+.+++|++|+||||||+.....+.+.+ ++|+..+++|+.+++.+++++.|.|.+.+
T Consensus 54 ~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 133 (287)
T PRK06194 54 GAEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAA 133 (287)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC
Confidence 55788899999999999999999999999999999999998766555554 77888887777777777777777664411
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
+- .
T Consensus 134 ~~------------~----------------------------------------------------------------- 136 (287)
T PRK06194 134 EK------------D----------------------------------------------------------------- 136 (287)
T ss_pred CC------------C-----------------------------------------------------------------
Confidence 00 0
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+ ...|+||++||..+... ..+...|++||+++
T Consensus 137 ------~--~~~g~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 168 (287)
T PRK06194 137 ------P--AYEGHIVNTASMAGLLA----------------------------------------PPAMGIYNVSKHAV 168 (287)
T ss_pred ------C--CCCeEEEEeCChhhccC----------------------------------------CCCCcchHHHHHHH
Confidence 0 00167888888877541 12334699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+++.++.++... ..+|++++|+||+|+|++...
T Consensus 169 ~~~~~~l~~e~~~~--~~~irv~~v~pg~i~t~~~~~ 203 (287)
T PRK06194 169 VSLTETLYQDLSLV--TDQVGASVLCPYFVPTGIWQS 203 (287)
T ss_pred HHHHHHHHHHHhhc--CCCeEEEEEEeCcccCccccc
Confidence 99999999988743 457999999999999998654
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-18 Score=158.48 Aligned_cols=137 Identities=23% Similarity=0.294 Sum_probs=99.8
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC-CCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA-PGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~-~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.+++||++|.++++++++.+.+ +|++|++|||+|+..... .....+++.+++
T Consensus 61 ~v~~~~~D~~~~~~~~~~~~~~~~-~g~id~li~~ag~~~~~~~~~~~~~~~~~~~------------------------ 115 (253)
T PRK07904 61 SVEVIDFDALDTDSHPKVIDAAFA-GGDVDVAIVAFGLLGDAEELWQNQRKAVQIA------------------------ 115 (253)
T ss_pred ceEEEEecCCChHHHHHHHHHHHh-cCCCCEEEEeeecCCchhhcccCHHHHHHHH------------------------
Confidence 688899999999999999999886 599999999999864321 111112333445
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
++|+.|++.++
T Consensus 116 ---------------------------------------------------------------------~vN~~~~~~l~ 126 (253)
T PRK07904 116 ---------------------------------------------------------------------EINYTAAVSVG 126 (253)
T ss_pred ---------------------------------------------------------------------HHHhHhHHHHH
Confidence 45555555555
Q ss_pred HHHhhcccC--CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 169 HILFPLLRP--HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 169 ~~~~p~l~~--~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+.++|.|++ .|+||++||..+... ..+..+|++||+++
T Consensus 127 ~~l~~~~~~~~~~~iv~isS~~g~~~----------------------------------------~~~~~~Y~~sKaa~ 166 (253)
T PRK07904 127 VLLGEKMRAQGFGQIIAMSSVAGERV----------------------------------------RRSNFVYGSTKAGL 166 (253)
T ss_pred HHHHHHHHhcCCceEEEEechhhcCC----------------------------------------CCCCcchHHHHHHH
Confidence 555555533 377888888776431 12334699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
.+|++.++.++... ||+|++|+||+++|++....
T Consensus 167 ~~~~~~l~~el~~~----~i~v~~v~Pg~v~t~~~~~~ 200 (253)
T PRK07904 167 DGFYLGLGEALREY----GVRVLVVRPGQVRTRMSAHA 200 (253)
T ss_pred HHHHHHHHHHHhhc----CCEEEEEeeCceecchhccC
Confidence 99999988888765 99999999999999987753
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.1e-18 Score=157.36 Aligned_cols=141 Identities=26% Similarity=0.329 Sum_probs=110.7
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHH-cCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQ-HGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~-~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
+.++.+++||++|.+++.++++.+.++ +|++|+||||||+.....+.+.+ +++++++++|+.+++.+++++.+.|++
T Consensus 47 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~- 125 (260)
T PRK08267 47 AGNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKA- 125 (260)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-
Confidence 456889999999999999999998777 89999999999998766555554 778888877777777777777766643
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 126 -------------------------------------------------------------------------------- 125 (260)
T PRK08267 126 -------------------------------------------------------------------------------- 125 (260)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+++++||++||..+... ......|+.||++
T Consensus 126 ----------~~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sKaa 155 (260)
T PRK08267 126 ----------TPGARVINTSSASAIYG----------------------------------------QPGLAVYSATKFA 155 (260)
T ss_pred ----------CCCCEEEEeCchhhCcC----------------------------------------CCCchhhHHHHHH
Confidence 12366777777665431 1233469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.++.++.+. ||++++|+||+++|++...
T Consensus 156 ~~~~~~~l~~~~~~~----~i~v~~i~pg~~~t~~~~~ 189 (260)
T PRK08267 156 VRGLTEALDLEWRRH----GIRVADVMPLFVDTAMLDG 189 (260)
T ss_pred HHHHHHHHHHHhccc----CcEEEEEecCCcCCccccc
Confidence 999998888887655 9999999999999998653
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-18 Score=156.75 Aligned_cols=142 Identities=21% Similarity=0.197 Sum_probs=108.9
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.++.||++|.+++.++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.+++++.+.|++
T Consensus 52 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 131 (241)
T PRK07454 52 STGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRA 131 (241)
T ss_pred hCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 3456788999999999999999999999999999999999987655555544 667777766666666666666555533
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 132 -------------------------------------------------------------------------------- 131 (241)
T PRK07454 132 -------------------------------------------------------------------------------- 131 (241)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
++.++||++||..+... ..+...|+.+|+
T Consensus 132 -----------~~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~ 160 (241)
T PRK07454 132 -----------RGGGLIINVSSIAARNA----------------------------------------FPQWGAYCVSKA 160 (241)
T ss_pred -----------cCCcEEEEEccHHhCcC----------------------------------------CCCccHHHHHHH
Confidence 11256777777665431 123356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
++..+++.++.++++. ||++++|.||+++|++..
T Consensus 161 ~~~~~~~~~a~e~~~~----gi~v~~i~pg~i~t~~~~ 194 (241)
T PRK07454 161 ALAAFTKCLAEEERSH----GIRVCTITLGAVNTPLWD 194 (241)
T ss_pred HHHHHHHHHHHHhhhh----CCEEEEEecCcccCCccc
Confidence 9999999988888765 999999999999999854
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.9e-18 Score=157.35 Aligned_cols=142 Identities=25% Similarity=0.293 Sum_probs=109.2
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
+.+.++.++.||+++.+++.++++.+.+++|++|++|||||......++...++|++.+++|+.+++.+++.+.+.|++
T Consensus 52 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~- 130 (258)
T PRK08628 52 ALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKA- 130 (258)
T ss_pred hcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhc-
Confidence 3466788999999999999999999999999999999999986554444444777777777777777666666665533
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 131 -------------------------------------------------------------------------------- 130 (258)
T PRK08628 131 -------------------------------------------------------------------------------- 130 (258)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
..|+|+++||..+... ..+..+|++||++
T Consensus 131 -----------~~~~iv~~ss~~~~~~----------------------------------------~~~~~~Y~~sK~a 159 (258)
T PRK08628 131 -----------SRGAIVNISSKTALTG----------------------------------------QGGTSGYAAAKGA 159 (258)
T ss_pred -----------cCcEEEEECCHHhccC----------------------------------------CCCCchhHHHHHH
Confidence 1255666666655431 1233569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.++.++... ||+||+|+||+|+|++.+.
T Consensus 160 ~~~~~~~l~~e~~~~----~i~v~~v~pg~v~t~~~~~ 193 (258)
T PRK08628 160 QLALTREWAVALAKD----GVRVNAVIPAEVMTPLYEN 193 (258)
T ss_pred HHHHHHHHHHHHhhc----CeEEEEEecCccCCHHHHH
Confidence 999999888887755 9999999999999998543
|
|
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.9e-19 Score=167.61 Aligned_cols=149 Identities=32% Similarity=0.489 Sum_probs=111.7
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
..++.+++||+++.++|.++.+.+.++++++|+||||||++.... ..+
T Consensus 85 ~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~--~~t------------------------------ 132 (314)
T KOG1208|consen 85 NQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPF--SLT------------------------------ 132 (314)
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCc--ccC------------------------------
Confidence 456777889999999999999999888889999999999877542 111
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
.|++|..|+||+.|+|.+
T Consensus 133 --------------------------------------------------------------~DG~E~~~~tN~lg~flL 150 (314)
T KOG1208|consen 133 --------------------------------------------------------------KDGLELTFATNYLGHFLL 150 (314)
T ss_pred --------------------------------------------------------------ccchhheehhhhHHHHHH
Confidence 256888889999999999
Q ss_pred HHHHhhcccCC--CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 168 CHILFPLLRPH--ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 168 ~~~~~p~l~~~--g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
++.++|.|+.. +|||+|||..+ ...+. ...++ ++....++...+|+.||.+
T Consensus 151 t~lLlp~lk~s~~~RIV~vsS~~~-~~~~~---------~~~l~-----------------~~~~~~~~~~~~Y~~SKla 203 (314)
T KOG1208|consen 151 TELLLPLLKRSAPSRIVNVSSILG-GGKID---------LKDLS-----------------GEKAKLYSSDAAYALSKLA 203 (314)
T ss_pred HHHHHHHHhhCCCCCEEEEcCccc-cCccc---------hhhcc-----------------chhccCccchhHHHHhHHH
Confidence 99999999875 79999999987 11101 11111 1111113444469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccc-ccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD-LTE 282 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~-~~~ 282 (313)
+..+++-|++.+. + ||.++++|||.|+|+ +.+
T Consensus 204 ~~l~~~eL~k~l~----~-~V~~~~~hPG~v~t~~l~r 236 (314)
T KOG1208|consen 204 NVLLANELAKRLK----K-GVTTYSVHPGVVKTTGLSR 236 (314)
T ss_pred HHHHHHHHHHHhh----c-CceEEEECCCcccccceec
Confidence 9999966655554 3 899999999999999 666
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-18 Score=155.99 Aligned_cols=143 Identities=23% Similarity=0.437 Sum_probs=108.4
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.++.||+++++++.++++.+.+.+|++|++|||||......+.+.+ +.|++.+++|+.+++.+++++.+.|.+
T Consensus 53 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 132 (247)
T PRK12935 53 KEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITE 132 (247)
T ss_pred hcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3456788999999999999999999999999999999999997655444443 666666666666666666655554432
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 133 -------------------------------------------------------------------------------- 132 (247)
T PRK12935 133 -------------------------------------------------------------------------------- 132 (247)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.+.+++|++||..+... ..+...|++||+
T Consensus 133 -----------~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~ 161 (247)
T PRK12935 133 -----------AEEGRIISISSIIGQAG----------------------------------------GFGQTNYSAAKA 161 (247)
T ss_pred -----------cCCcEEEEEcchhhcCC----------------------------------------CCCCcchHHHHH
Confidence 12356777777665431 223356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.++.++.+. ||+++.|+||+++|++...
T Consensus 162 a~~~~~~~l~~~~~~~----~i~v~~v~pg~v~t~~~~~ 196 (247)
T PRK12935 162 GMLGFTKSLALELAKT----NVTVNAICPGFIDTEMVAE 196 (247)
T ss_pred HHHHHHHHHHHHHHHc----CcEEEEEEeCCCcChhhhh
Confidence 9999999998888655 9999999999999998554
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.4e-18 Score=154.69 Aligned_cols=141 Identities=28% Similarity=0.444 Sum_probs=110.3
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.++.||+++.++++++++.+.+++|++|++|||||......+.+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 51 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-- 128 (245)
T PRK12824 51 EDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCE-- 128 (245)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--
Confidence 45688899999999999999999999999999999999997655444444 777777777777777777776666543
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 129 -------------------------------------------------------------------------------- 128 (245)
T PRK12824 129 -------------------------------------------------------------------------------- 128 (245)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
++.++||++||..+... ..+...|+++|+|+
T Consensus 129 ---------~~~~~iv~iss~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 159 (245)
T PRK12824 129 ---------QGYGRIINISSVNGLKG----------------------------------------QFGQTNYSAAKAGM 159 (245)
T ss_pred ---------hCCeEEEEECChhhccC----------------------------------------CCCChHHHHHHHHH
Confidence 11256777777665431 12334699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.++++.++.++.+. ||+++.|+||++.|++.+.
T Consensus 160 ~~~~~~l~~~~~~~----~i~v~~v~pg~~~t~~~~~ 192 (245)
T PRK12824 160 IGFTKALASEGARY----GITVNCIAPGYIATPMVEQ 192 (245)
T ss_pred HHHHHHHHHHHHHh----CeEEEEEEEcccCCcchhh
Confidence 99999998887655 9999999999999998654
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.3e-18 Score=153.49 Aligned_cols=79 Identities=20% Similarity=0.199 Sum_probs=61.9
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
+..+.+|++|.+++.++++ +++++|++|||||........+.+ ++|++.+++|+.+++.+++++.+.|+++++||
T Consensus 53 ~~~~~~D~~~~~~~~~~~~----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv 128 (237)
T PRK12742 53 ATAVQTDSADRDAVIDVVR----KSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRII 128 (237)
T ss_pred CeEEecCCCCHHHHHHHHH----HhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEE
Confidence 4567899999988776654 478999999999987655555555 89999999999999998888888776555555
Q ss_pred EEec
Q psy2266 90 NVAS 93 (313)
Q Consensus 90 ~isS 93 (313)
+++|
T Consensus 129 ~isS 132 (237)
T PRK12742 129 IIGS 132 (237)
T ss_pred EEec
Confidence 5555
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.3e-18 Score=152.87 Aligned_cols=81 Identities=22% Similarity=0.394 Sum_probs=62.8
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC------CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD------TAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~------~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
.++.+++||+++.++++++ .+++|++|+||||||+... ..+.+++ +.|++.+++|+.+++.+++++.|.
T Consensus 43 ~~~~~~~~Dls~~~~~~~~----~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~ 118 (235)
T PRK09009 43 DNVQWHALDVTDEAEIKQL----SEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPK 118 (235)
T ss_pred CceEEEEecCCCHHHHHHH----HHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence 4677899999999988774 4567899999999999753 2345555 889999999999999999988888
Q ss_pred ccCC--ceEEEEec
Q psy2266 82 LRPH--ARVVNVAS 93 (313)
Q Consensus 82 m~~~--g~IV~isS 93 (313)
|+++ ++|++++|
T Consensus 119 ~~~~~~~~i~~iss 132 (235)
T PRK09009 119 LKQSESAKFAVISA 132 (235)
T ss_pred ccccCCceEEEEee
Confidence 7652 44444444
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-18 Score=160.08 Aligned_cols=143 Identities=18% Similarity=0.114 Sum_probs=104.4
Q ss_pred CCceeEEEeecCCHHHH----HHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh------------HHHHHHHhHHHHHH
Q psy2266 8 NNNVRFHQLDILDQSSI----HKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG------------QRAETTLATNFFAL 71 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v----~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~------------~~~~~~~~vNl~~~ 71 (313)
+.++..+.||++|.+++ +++++.+.+++|++|+||||||+....++.+.+ ++|.+++++|+.++
T Consensus 51 ~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~ 130 (267)
T TIGR02685 51 PNSAVTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAP 130 (267)
T ss_pred CCceEEEEccCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHH
Confidence 45677889999999855 566677777899999999999986544332222 25777888888888
Q ss_pred HHHHHHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcch
Q psy2266 72 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQ 151 (313)
Q Consensus 72 i~l~ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~ 151 (313)
+.++|++.+.|+..+...
T Consensus 131 ~~l~~~~~~~~~~~~~~~-------------------------------------------------------------- 148 (267)
T TIGR02685 131 YFLIKAFAQRQAGTRAEQ-------------------------------------------------------------- 148 (267)
T ss_pred HHHHHHHHHHhhhccccc--------------------------------------------------------------
Confidence 888887777664311000
Q ss_pred hhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhccccc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKE 231 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (313)
....++|++++|..+...
T Consensus 149 -----------------------~~~~~~iv~~~s~~~~~~--------------------------------------- 166 (267)
T TIGR02685 149 -----------------------RSTNLSIVNLCDAMTDQP--------------------------------------- 166 (267)
T ss_pred -----------------------CCCCeEEEEehhhhccCC---------------------------------------
Confidence 011267888888776541
Q ss_pred CCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccc
Q psy2266 232 AGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD 279 (313)
Q Consensus 232 ~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~ 279 (313)
..+..+|++||+|+.+|++.++.++.+. ||+||+|+||++.|+
T Consensus 167 -~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~~~~~ 209 (267)
T TIGR02685 167 -LLGFTMYTMAKHALEGLTRSAALELAPL----QIRVNGVAPGLSLLP 209 (267)
T ss_pred -CcccchhHHHHHHHHHHHHHHHHHHhhh----CeEEEEEecCCccCc
Confidence 2234569999999999999999998765 999999999999776
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.2e-18 Score=157.91 Aligned_cols=141 Identities=23% Similarity=0.265 Sum_probs=111.5
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++..+++|++|+++++++++.+.+.++++|++|||||+....++.+.+ ++|++.+++|+.+++.+++++.|.|++.
T Consensus 47 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 126 (275)
T PRK08263 47 YGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ 126 (275)
T ss_pred ccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 345678889999999999999999999999999999999998766666655 7788888777777777777766665431
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 127 -------------------------------------------------------------------------------- 126 (275)
T PRK08263 127 -------------------------------------------------------------------------------- 126 (275)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+.++||++||..+... ..+...|+++|++
T Consensus 127 -----------~~~~iv~vsS~~~~~~----------------------------------------~~~~~~Y~~sKaa 155 (275)
T PRK08263 127 -----------RSGHIIQISSIGGISA----------------------------------------FPMSGIYHASKWA 155 (275)
T ss_pred -----------CCCEEEEEcChhhcCC----------------------------------------CCCccHHHHHHHH
Confidence 1256777777665431 2233469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+..+++.++.++... ||+|+.|+||+++|++..
T Consensus 156 ~~~~~~~la~e~~~~----gi~v~~v~Pg~~~t~~~~ 188 (275)
T PRK08263 156 LEGMSEALAQEVAEF----GIKVTLVEPGGYSTDWAG 188 (275)
T ss_pred HHHHHHHHHHHhhhh----CcEEEEEecCCccCCccc
Confidence 999998888887655 999999999999999874
|
|
| >KOG1209|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.2e-19 Score=156.66 Aligned_cols=136 Identities=24% Similarity=0.317 Sum_probs=106.7
Q ss_pred eeEEEeecCCHHHHHHHHHHHHH-HcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQT-QHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~-~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
..++.+|+++++++.++...+.+ .+|+||+|+||||.....+..+.+ ++.++
T Consensus 54 l~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~-------------------------- 107 (289)
T KOG1209|consen 54 LKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQ-------------------------- 107 (289)
T ss_pred CeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHh--------------------------
Confidence 56789999999999999999988 789999999999998877766665 54444
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
.|++|++|++.++
T Consensus 108 -------------------------------------------------------------------~f~vNvfG~irM~ 120 (289)
T KOG1209|consen 108 -------------------------------------------------------------------CFKVNVFGHIRMC 120 (289)
T ss_pred -------------------------------------------------------------------hhccceeeeehHH
Confidence 4555566666666
Q ss_pred HHHhhcc-cCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 169 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 169 ~~~~p~l-~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
+++...| |.+|.|||++|..+..+- .| ...|++||+|+.
T Consensus 121 ~a~~h~likaKGtIVnvgSl~~~vpf---------------------------------------pf-~~iYsAsKAAih 160 (289)
T KOG1209|consen 121 RALSHFLIKAKGTIVNVGSLAGVVPF---------------------------------------PF-GSIYSASKAAIH 160 (289)
T ss_pred HHHHHHHHHccceEEEecceeEEecc---------------------------------------ch-hhhhhHHHHHHH
Confidence 6665544 557999999999987621 12 235999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.+++.|+.|| +++||+|..+.||.|.|++...
T Consensus 161 ay~~tLrlEl----~PFgv~Vin~itGGv~T~Ia~k 192 (289)
T KOG1209|consen 161 AYARTLRLEL----KPFGVRVINAITGGVATDIADK 192 (289)
T ss_pred HhhhhcEEee----eccccEEEEecccceecccccC
Confidence 9996655554 5669999999999999998765
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.7e-18 Score=155.00 Aligned_cols=147 Identities=24% Similarity=0.329 Sum_probs=108.9
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc-cc
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL-LR 83 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~-m~ 83 (313)
..+.++.+++||++|.++++++++.+.+.++++|++|||||.....+..+.+ +.|++++++|+.+++.+++++.+. |+
T Consensus 58 ~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~ 137 (259)
T PRK08213 58 ALGIDALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMI 137 (259)
T ss_pred hcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHH
Confidence 3456788899999999999999999999999999999999986544444444 777777777777777777776665 32
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 138 ~~------------------------------------------------------------------------------ 139 (259)
T PRK08213 138 PR------------------------------------------------------------------------------ 139 (259)
T ss_pred hc------------------------------------------------------------------------------
Confidence 21
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+.+++|++||..+....++ ...+..+|+++|
T Consensus 140 -------------~~~~~v~~sS~~~~~~~~~------------------------------------~~~~~~~Y~~sK 170 (259)
T PRK08213 140 -------------GYGRIINVASVAGLGGNPP------------------------------------EVMDTIAYNTSK 170 (259)
T ss_pred -------------CCeEEEEECChhhccCCCc------------------------------------cccCcchHHHHH
Confidence 1245666666554331100 011235699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+++..+++.++.++.+. ||++|.|+||+++|++...
T Consensus 171 a~~~~~~~~~a~~~~~~----gi~v~~v~Pg~~~t~~~~~ 206 (259)
T PRK08213 171 GAVINFTRALAAEWGPH----GIRVNAIAPGFFPTKMTRG 206 (259)
T ss_pred HHHHHHHHHHHHHhccc----CEEEEEEecCcCCCcchhh
Confidence 99999998888887755 9999999999999998654
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.4e-18 Score=153.48 Aligned_cols=143 Identities=25% Similarity=0.305 Sum_probs=110.9
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.++++|++|.++++++++.+.+.++++|++|||||......+.+.+ ++|++.+++|+.+++.+++++.+.|.+
T Consensus 53 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 132 (250)
T PRK12939 53 AAGGRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRD 132 (250)
T ss_pred hcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3356788899999999999999999999999999999999987765554444 777777777777777777766665533
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 133 -------------------------------------------------------------------------------- 132 (250)
T PRK12939 133 -------------------------------------------------------------------------------- 132 (250)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+++|++|++||..+... .....+|+++|+
T Consensus 133 -----------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~y~~sK~ 161 (250)
T PRK12939 133 -----------SGRGRIVNLASDTALWG----------------------------------------APKLGAYVASKG 161 (250)
T ss_pred -----------cCCeEEEEECchhhccC----------------------------------------CCCcchHHHHHH
Confidence 11356666666555431 122346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.++.++... +|++++|+||+++|++.+.
T Consensus 162 ~~~~~~~~l~~~~~~~----~i~v~~v~pg~v~t~~~~~ 196 (250)
T PRK12939 162 AVIGMTRSLARELGGR----GITVNAIAPGLTATEATAY 196 (250)
T ss_pred HHHHHHHHHHHHHhhh----CEEEEEEEECCCCCccccc
Confidence 9999999988887655 9999999999999998754
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3e-18 Score=155.68 Aligned_cols=140 Identities=20% Similarity=0.157 Sum_probs=109.2
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++.++.+|++|+++++++++.+.+++|++|++|||||.... .++.+.+ ++|++++++|+.+++.+++++.+.|++
T Consensus 52 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 131 (258)
T PRK07890 52 LGRRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAE 131 (258)
T ss_pred hCCceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 35668899999999999999999999999999999999998654 3455554 888888888888887777777776643
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 132 ~------------------------------------------------------------------------------- 132 (258)
T PRK07890 132 S------------------------------------------------------------------------------- 132 (258)
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+++||++||..+.. +..+...|+++|+
T Consensus 133 -------------~~~ii~~sS~~~~~----------------------------------------~~~~~~~Y~~sK~ 159 (258)
T PRK07890 133 -------------GGSIVMINSMVLRH----------------------------------------SQPKYGAYKMAKG 159 (258)
T ss_pred -------------CCEEEEEechhhcc----------------------------------------CCCCcchhHHHHH
Confidence 24555555554432 1123356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
++..+++.++.++.+. ||++|+|+||++.||+..
T Consensus 160 a~~~l~~~~a~~~~~~----~i~v~~v~pg~v~~~~~~ 193 (258)
T PRK07890 160 ALLAASQSLATELGPQ----GIRVNSVAPGYIWGDPLK 193 (258)
T ss_pred HHHHHHHHHHHHHhhc----CcEEEEEeCCccCcHHHH
Confidence 9999999988888765 999999999999999754
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.2e-18 Score=151.32 Aligned_cols=142 Identities=25% Similarity=0.348 Sum_probs=109.5
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+++.....+...|||.|.+++++++++++++|..+++|||||||++...+...++
T Consensus 45 ~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~------------------------- 99 (245)
T COG3967 45 AKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAED------------------------- 99 (245)
T ss_pred HHhcCcchheeeecccchhhHHHHHHHHHhhCCchheeeecccccchhhccCCcc-------------------------
Confidence 3445566788999999999999999999999999999999999998653321110
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
..+..+..+.+|+.+
T Consensus 100 -----------------------------------------------------------------~~~~~~~eI~~Nl~A 114 (245)
T COG3967 100 -----------------------------------------------------------------LLDDAEQEIATNLLA 114 (245)
T ss_pred -----------------------------------------------------------------hhhHHHHHHHHhhhh
Confidence 013445566777777
Q ss_pred HHHHHHHHhhcccC--CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 164 LVTVCHILFPLLRP--HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 164 ~~~~~~~~~p~l~~--~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
++++++.++|+|.+ .+.||+|||..+..+. ...+.|++
T Consensus 115 PI~Lt~~~lphl~~q~~a~IInVSSGLafvPm----------------------------------------~~~PvYca 154 (245)
T COG3967 115 PIRLTALLLPHLLRQPEATIINVSSGLAFVPM----------------------------------------ASTPVYCA 154 (245)
T ss_pred HHHHHHHHHHHHHhCCCceEEEeccccccCcc----------------------------------------cccccchh
Confidence 77777777777744 4889999999987632 12245999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD 279 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~ 279 (313)
+|+|+++|+..|...++. .+|.|--+.|-.|+|+
T Consensus 155 TKAaiHsyt~aLR~Qlk~----t~veVIE~~PP~V~t~ 188 (245)
T COG3967 155 TKAAIHSYTLALREQLKD----TSVEVIELAPPLVDTT 188 (245)
T ss_pred hHHHHHHHHHHHHHHhhh----cceEEEEecCCceecC
Confidence 999999999766666554 4899999999999997
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.5e-18 Score=156.66 Aligned_cols=139 Identities=27% Similarity=0.344 Sum_probs=107.8
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
...++||++|+++++++++.+.+.++++|+||||||+.....+.+.+ ++|+..+++|+.+++.+++++.|.|.+.
T Consensus 52 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---- 127 (272)
T PRK07832 52 PEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAA---- 127 (272)
T ss_pred ceEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC----
Confidence 34578999999999999999999999999999999987655555555 7888888777777777777777666331
Q ss_pred EEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHH
Q psy2266 90 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCH 169 (313)
Q Consensus 90 ~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 169 (313)
T Consensus 128 -------------------------------------------------------------------------------- 127 (272)
T PRK07832 128 -------------------------------------------------------------------------------- 127 (272)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHH
Q psy2266 170 ILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKL 249 (313)
Q Consensus 170 ~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l 249 (313)
.++|+||++||..+... .....+|++||+++..+
T Consensus 128 ------~~~g~ii~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~~~ 161 (272)
T PRK07832 128 ------GRGGHLVNVSSAAGLVA----------------------------------------LPWHAAYSASKFGLRGL 161 (272)
T ss_pred ------CCCcEEEEEccccccCC----------------------------------------CCCCcchHHHHHHHHHH
Confidence 11256667766655331 12334699999999999
Q ss_pred HHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 250 SFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 250 ~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++.++.++... ||+|++|+||+++|++.+.
T Consensus 162 ~~~l~~e~~~~----~i~v~~v~Pg~v~t~~~~~ 191 (272)
T PRK07832 162 SEVLRFDLARH----GIGVSVVVPGAVKTPLVNT 191 (272)
T ss_pred HHHHHHHhhhc----CcEEEEEecCcccCcchhc
Confidence 99998887655 9999999999999998654
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-18 Score=173.09 Aligned_cols=156 Identities=25% Similarity=0.250 Sum_probs=123.1
Q ss_pred cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC--CCc----chhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP--GSF----GQRA 153 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~--~~~----~~~~ 153 (313)
+.+.+|+.+++....+.+... .++ ....+|..++++++++++.+.+.+|++|+||||||...+ .++ .++|
T Consensus 27 ~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~ 105 (520)
T PRK06484 27 RAGDQVVVADRNVERARERAD-SLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEF 105 (520)
T ss_pred HCCCEEEEEeCCHHHHHHHHH-HhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHH
Confidence 456788888765443322211 111 124567789999999999999999999999999998432 333 3789
Q ss_pred hhhhhcccccHHHHHHHHhhcccC--C-CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccc
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRP--H-ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDK 230 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~--~-g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (313)
+.++++|+.|++.++++++|.|++ . ++||++||..+...
T Consensus 106 ~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~-------------------------------------- 147 (520)
T PRK06484 106 ARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVA-------------------------------------- 147 (520)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCC--------------------------------------
Confidence 999999999999999999999954 2 49999999988652
Q ss_pred cCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 231 EAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 231 ~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+..+|+++|+|+..|++.++.++.+. ||+||+|+||+|+|++...
T Consensus 148 --~~~~~~Y~asKaal~~l~~~la~e~~~~----~i~v~~i~Pg~v~t~~~~~ 194 (520)
T PRK06484 148 --LPKRTAYSASKAAVISLTRSLACEWAAK----GIRVNAVLPGYVRTQMVAE 194 (520)
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHhhhh----CeEEEEEccCCcCchhhhh
Confidence 2334569999999999999999988766 9999999999999998654
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.2e-18 Score=152.17 Aligned_cols=134 Identities=25% Similarity=0.310 Sum_probs=99.4
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
.++..+.+|++++ ++.+.+.+|++|++|||||+... .++.+.+ ++|++++++|+.+++.+++++.+.|++
T Consensus 45 ~~~~~~~~D~~~~------~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-- 116 (235)
T PRK06550 45 GNFHFLQLDLSDD------LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLE-- 116 (235)
T ss_pred CcEEEEECChHHH------HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--
Confidence 3567889999876 55555678999999999998643 3444444 777888877777777777777665543
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 117 -------------------------------------------------------------------------------- 116 (235)
T PRK06550 117 -------------------------------------------------------------------------------- 116 (235)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
++.|+|+++||..+... ..+...|+++|+++
T Consensus 117 ---------~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 147 (235)
T PRK06550 117 ---------RKSGIIINMCSIASFVA----------------------------------------GGGGAAYTASKHAL 147 (235)
T ss_pred ---------cCCcEEEEEcChhhccC----------------------------------------CCCCcccHHHHHHH
Confidence 11256777777665431 22335699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+++.++.++.+. ||+||+|+||+|+|++...
T Consensus 148 ~~~~~~la~~~~~~----gi~v~~v~pg~v~t~~~~~ 180 (235)
T PRK06550 148 AGFTKQLALDYAKD----GIQVFGIAPGAVKTPMTAA 180 (235)
T ss_pred HHHHHHHHHHhhhc----CeEEEEEeeCCccCccccc
Confidence 99999999988765 9999999999999998653
|
|
| >KOG1199|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-19 Score=155.92 Aligned_cols=153 Identities=21% Similarity=0.244 Sum_probs=114.8
Q ss_pred cccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-C------CCChhHHHHHHHhHHHHHHHHH
Q psy2266 2 KVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-A------PGSFGQRAETTLATNFFALVTV 74 (313)
Q Consensus 2 ~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~------~~~~~~~~~~~~~vNl~~~i~l 74 (313)
+.++++|+++++...||+++++++..+..++.+||++|.+|||||+..-. . ..-..++|++.+++|+.++|.+
T Consensus 48 ~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnv 127 (260)
T KOG1199|consen 48 DVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNV 127 (260)
T ss_pred HHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeee
Confidence 46788999999999999999999999999999999999999999996422 1 1111266677776666666666
Q ss_pred HHHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhh
Q psy2266 75 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAE 154 (313)
Q Consensus 75 ~ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~ 154 (313)
+|...-+|-++ +..+++
T Consensus 128 irl~aglmg~n--------------epdq~g------------------------------------------------- 144 (260)
T KOG1199|consen 128 IRLGAGLMGEN--------------EPDQNG------------------------------------------------- 144 (260)
T ss_pred eeehhhhhcCC--------------CCCCCC-------------------------------------------------
Confidence 66655555331 000000
Q ss_pred hhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCC
Q psy2266 155 TTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGW 234 (313)
Q Consensus 155 ~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (313)
.+|.||+..|.++.. +..
T Consensus 145 ----------------------qrgviintasvaafd----------------------------------------gq~ 162 (260)
T KOG1199|consen 145 ----------------------QRGVIINTASVAAFD----------------------------------------GQT 162 (260)
T ss_pred ----------------------cceEEEeeceeeeec----------------------------------------Ccc
Confidence 127899999998865 234
Q ss_pred CCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 235 PEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 235 ~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+|++||.++..++--++++++.+ |||++.|.||..+|||-..
T Consensus 163 gqaaysaskgaivgmtlpiardla~~----gir~~tiapglf~tpllss 207 (260)
T KOG1199|consen 163 GQAAYSASKGAIVGMTLPIARDLAGD----GIRFNTIAPGLFDTPLLSS 207 (260)
T ss_pred chhhhhcccCceEeeechhhhhcccC----ceEEEeecccccCChhhhh
Confidence 66779999999999996666666555 9999999999999998654
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=9e-18 Score=153.92 Aligned_cols=141 Identities=23% Similarity=0.275 Sum_probs=108.2
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.++.||+++++++.++++.+.+++|++|+||||||......+.+.+ ++|+.++++|+.+++.+.+++.+.|++.
T Consensus 57 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (263)
T PRK07814 57 AGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEH 136 (263)
T ss_pred cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhh
Confidence 355678899999999999999999999999999999999986655444444 7777777777777777777666655320
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 137 -------------------------------------------------------------------------------- 136 (263)
T PRK07814 137 -------------------------------------------------------------------------------- 136 (263)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
.+.|+|+++||..+.. +..+..+|++||++
T Consensus 137 ----------~~~g~iv~~sS~~~~~----------------------------------------~~~~~~~Y~~sK~a 166 (263)
T PRK07814 137 ----------SGGGSVINISSTMGRL----------------------------------------AGRGFAAYGTAKAA 166 (263)
T ss_pred ----------cCCeEEEEEccccccC----------------------------------------CCCCCchhHHHHHH
Confidence 1125677777766543 12234569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+..+++.++.++. + +|++|+|+||++.|++..
T Consensus 167 ~~~~~~~~~~e~~----~-~i~v~~i~Pg~v~t~~~~ 198 (263)
T PRK07814 167 LAHYTRLAALDLC----P-RIRVNAIAPGSILTSALE 198 (263)
T ss_pred HHHHHHHHHHHHC----C-CceEEEEEeCCCcCchhh
Confidence 9999998888874 2 599999999999999754
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.1e-17 Score=150.06 Aligned_cols=141 Identities=23% Similarity=0.357 Sum_probs=108.5
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++..+.||++|+++++++++.+.+.++++|++|||||......+.+.+ ++|++.+++|+.+++.+++++.+.|++.
T Consensus 49 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~- 127 (242)
T TIGR01829 49 GFDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER- 127 (242)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-
Confidence 45688899999999999999999999999999999999987655444444 6777777777777766666666655431
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 128 -------------------------------------------------------------------------------- 127 (242)
T TIGR01829 128 -------------------------------------------------------------------------------- 127 (242)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+.++|+++||..+.. +..+...|+++|+++
T Consensus 128 ----------~~~~iv~iss~~~~~----------------------------------------~~~~~~~y~~sk~a~ 157 (242)
T TIGR01829 128 ----------GWGRIINISSVNGQK----------------------------------------GQFGQTNYSAAKAGM 157 (242)
T ss_pred ----------CCcEEEEEcchhhcC----------------------------------------CCCCcchhHHHHHHH
Confidence 125667777665543 122335699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+++.+++++... ||+++.+.||++.|++...
T Consensus 158 ~~~~~~la~~~~~~----~i~v~~i~pg~~~t~~~~~ 190 (242)
T TIGR01829 158 IGFTKALAQEGATK----GVTVNTISPGYIATDMVMA 190 (242)
T ss_pred HHHHHHHHHHhhhh----CeEEEEEeeCCCcCccccc
Confidence 99999988887655 9999999999999998654
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.7e-18 Score=152.08 Aligned_cols=142 Identities=25% Similarity=0.282 Sum_probs=109.7
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++..+.+|++|.++++++++.+.++++++|++|||||......+.+.+ ++|++++++|+.+++.+.+++.+.|++.
T Consensus 50 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (250)
T TIGR03206 50 KGGNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER 129 (250)
T ss_pred cCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 456788899999999999999999999999999999999987655544444 6777777777777766666666655431
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 130 -------------------------------------------------------------------------------- 129 (250)
T TIGR03206 130 -------------------------------------------------------------------------------- 129 (250)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+.++|+++||..+... ..+...|+.+|+|
T Consensus 130 -----------~~~~ii~iss~~~~~~----------------------------------------~~~~~~Y~~sK~a 158 (250)
T TIGR03206 130 -----------GAGRIVNIASDAARVG----------------------------------------SSGEAVYAACKGG 158 (250)
T ss_pred -----------CCeEEEEECchhhccC----------------------------------------CCCCchHHHHHHH
Confidence 1256777777665431 1233569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.+++++... ||+++.|+||+++|++...
T Consensus 159 ~~~~~~~la~~~~~~----~i~v~~v~pg~~~~~~~~~ 192 (250)
T TIGR03206 159 LVAFSKTMAREHARH----GITVNVVCPGPTDTALLDD 192 (250)
T ss_pred HHHHHHHHHHHHhHh----CcEEEEEecCcccchhHHh
Confidence 999999999988755 9999999999999998654
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.4e-18 Score=173.32 Aligned_cols=142 Identities=25% Similarity=0.270 Sum_probs=108.1
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCh---hHHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF---GQRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~---~~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
.+.++.+++||++|.++++++++.+.+++|++|++|||||+.....+.+. .++|++++++|+.+++.+++++.|.|+
T Consensus 418 ~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 497 (657)
T PRK07201 418 KGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMR 497 (657)
T ss_pred cCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 46678899999999999999999999999999999999998654433221 156666666666666666666555554
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 498 ~~------------------------------------------------------------------------------ 499 (657)
T PRK07201 498 ER------------------------------------------------------------------------------ 499 (657)
T ss_pred hc------------------------------------------------------------------------------
Confidence 31
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+.|+||++||..+... .....+|++||
T Consensus 500 -------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK 526 (657)
T PRK07201 500 -------------RFGHVVNVSSIGVQTN----------------------------------------APRFSAYVASK 526 (657)
T ss_pred -------------CCCEEEEECChhhcCC----------------------------------------CCCcchHHHHH
Confidence 1267777777765431 12334699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+++..+++.++.++.+. ||+||+|+||+|+|+|...
T Consensus 527 ~a~~~~~~~la~e~~~~----~i~v~~v~pg~v~T~~~~~ 562 (657)
T PRK07201 527 AALDAFSDVAASETLSD----GITFTTIHMPLVRTPMIAP 562 (657)
T ss_pred HHHHHHHHHHHHHHHhh----CCcEEEEECCcCcccccCc
Confidence 99999999999998765 9999999999999998754
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1e-17 Score=151.41 Aligned_cols=138 Identities=24% Similarity=0.317 Sum_probs=102.8
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC---CCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT---APGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~---~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+.+...+.+|++|.++++++++.+.+++|++|+||||||+.... ++.+.+ ++|++.+++|+.+++.+++++.+.|.
T Consensus 54 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 133 (250)
T PRK07774 54 GGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMA 133 (250)
T ss_pred CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 44677889999999999999999999999999999999986532 233333 55555665555555555555444442
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 134 ~------------------------------------------------------------------------------- 134 (250)
T PRK07774 134 K------------------------------------------------------------------------------- 134 (250)
T ss_pred H-------------------------------------------------------------------------------
Confidence 2
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
.++|+|+++||..+.. +...|++||
T Consensus 135 ------------~~~~~iv~~sS~~~~~-------------------------------------------~~~~Y~~sK 159 (250)
T PRK07774 135 ------------RGGGAIVNQSSTAAWL-------------------------------------------YSNFYGLAK 159 (250)
T ss_pred ------------hCCcEEEEEecccccC-------------------------------------------CccccHHHH
Confidence 1236777777766532 224699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+++..+++.+++++... ||++++++||+++|++...
T Consensus 160 ~a~~~~~~~l~~~~~~~----~i~v~~v~pg~~~t~~~~~ 195 (250)
T PRK07774 160 VGLNGLTQQLARELGGM----NIRVNAIAPGPIDTEATRT 195 (250)
T ss_pred HHHHHHHHHHHHHhCcc----CeEEEEEecCcccCccccc
Confidence 99999999888887655 9999999999999998764
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-17 Score=150.65 Aligned_cols=143 Identities=26% Similarity=0.381 Sum_probs=107.8
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.+++||+++.++++++++.+.++++++|++|||||+.....+.+.+ +.+++.+++|+.+++.+++++.+.|++.
T Consensus 52 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~- 130 (248)
T PRK08251 52 GIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQ- 130 (248)
T ss_pred CceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-
Confidence 45788899999999999999999999999999999999997655444443 6666666666666666666555554331
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 131 -------------------------------------------------------------------------------- 130 (248)
T PRK08251 131 -------------------------------------------------------------------------------- 130 (248)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+.++||++||..+.... ..+..+|+.||+++
T Consensus 131 ----------~~~~iv~~sS~~~~~~~---------------------------------------~~~~~~Y~~sK~a~ 161 (248)
T PRK08251 131 ----------GSGHLVLISSVSAVRGL---------------------------------------PGVKAAYAASKAGV 161 (248)
T ss_pred ----------CCCeEEEEeccccccCC---------------------------------------CCCcccHHHHHHHH
Confidence 12567777776654311 01134699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
..+++.++.++... ||++++|+||+++|++.+..
T Consensus 162 ~~~~~~l~~~~~~~----~i~v~~v~pg~v~t~~~~~~ 195 (248)
T PRK08251 162 ASLGEGLRAELAKT----PIKVSTIEPGYIRSEMNAKA 195 (248)
T ss_pred HHHHHHHHHHhccc----CcEEEEEecCcCcchhhhcc
Confidence 99998888887654 99999999999999987653
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.5e-18 Score=159.34 Aligned_cols=83 Identities=29% Similarity=0.446 Sum_probs=62.0
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccC--CceE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP--HARV 88 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~--~g~I 88 (313)
+.++++|++|.++++++++.+.++++++|+||||||+.... .....++|+..+++|+.+++.+++++.|.|++ +++|
T Consensus 73 v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~i 151 (315)
T PRK06196 73 VEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACP-ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARV 151 (315)
T ss_pred CeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCCC-CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeE
Confidence 67889999999999999999999999999999999986432 22222667777777777777777777766644 2455
Q ss_pred EEEecc
Q psy2266 89 VNVASK 94 (313)
Q Consensus 89 V~isS~ 94 (313)
|++||.
T Consensus 152 V~vSS~ 157 (315)
T PRK06196 152 VALSSA 157 (315)
T ss_pred EEECCH
Confidence 555553
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.6e-17 Score=151.22 Aligned_cols=142 Identities=22% Similarity=0.190 Sum_probs=108.6
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.++.+|+++++++.++++.+.+++|++|++|||||......+.+.+ ++|+.++++|+.+++.+++++.+.|++
T Consensus 53 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 132 (260)
T PRK06198 53 ALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRR 132 (260)
T ss_pred hcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 4466778899999999999999999999999999999999987655444444 777777777777777777766665533
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 133 ~------------------------------------------------------------------------------- 133 (260)
T PRK06198 133 R------------------------------------------------------------------------------- 133 (260)
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
...|++|++||..+... ......|+++|+
T Consensus 134 -----------~~~g~iv~~ss~~~~~~----------------------------------------~~~~~~Y~~sK~ 162 (260)
T PRK06198 134 -----------KAEGTIVNIGSMSAHGG----------------------------------------QPFLAAYCASKG 162 (260)
T ss_pred -----------CCCCEEEEECCcccccC----------------------------------------CCCcchhHHHHH
Confidence 01256666766665431 122346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
++..+++.++.++... ||+|++|+||++.|++.
T Consensus 163 a~~~~~~~~a~e~~~~----~i~v~~i~pg~~~t~~~ 195 (260)
T PRK06198 163 ALATLTRNAAYALLRN----RIRVNGLNIGWMATEGE 195 (260)
T ss_pred HHHHHHHHHHHHhccc----CeEEEEEeeccccCcch
Confidence 9999999988887755 99999999999999974
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.5e-17 Score=149.96 Aligned_cols=140 Identities=22% Similarity=0.321 Sum_probs=102.3
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCC---------CChh-HHHHHHHhHHHHHHHHHH
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP---------GSFG-QRAETTLATNFFALVTVC 75 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~---------~~~~-~~~~~~~~vNl~~~i~l~ 75 (313)
..+.++..+++|+++.++++++++.+.+.++++|++|||||+...... .+++ ++|+.++++|+.+++.
T Consensus 51 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~-- 128 (253)
T PRK08217 51 ALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFL-- 128 (253)
T ss_pred hcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHH--
Confidence 346678889999999999999999999889999999999997553221 2222 4555555555555544
Q ss_pred HHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhh
Q psy2266 76 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAET 155 (313)
Q Consensus 76 ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~ 155 (313)
T Consensus 129 -------------------------------------------------------------------------------- 128 (253)
T PRK08217 129 -------------------------------------------------------------------------------- 128 (253)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccccHHHHHHHHhhcccC---CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccC
Q psy2266 156 TLATNFFALVTVCHILFPLLRP---HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEA 232 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p~l~~---~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (313)
+++.++|.|.+ +++|+++||.... +
T Consensus 129 -----------~~~~~~~~l~~~~~~~~iv~~ss~~~~-----------------------------------------~ 156 (253)
T PRK08217 129 -----------CGREAAAKMIESGSKGVIINISSIARA-----------------------------------------G 156 (253)
T ss_pred -----------HHHHHHHHHHhcCCCeEEEEEcccccc-----------------------------------------C
Confidence 44445554422 2567777775421 1
Q ss_pred CCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 233 GWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 233 ~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+..+|++||+|+..+++.|++++.+. ||++++++||+++|++.+.
T Consensus 157 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~----~i~v~~v~pg~v~t~~~~~ 203 (253)
T PRK08217 157 NMGQTNYSASKAGVAAMTVTWAKELARY----GIRVAAIAPGVIETEMTAA 203 (253)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHc----CcEEEEEeeCCCcCccccc
Confidence 2234569999999999999999988765 9999999999999998755
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.8e-17 Score=151.27 Aligned_cols=140 Identities=21% Similarity=0.188 Sum_probs=106.6
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
.++.++.||++|+++++++++.+.+++|++|++|||||.... .++.+.+ ++|++++++|+.+++.+++++.+.|.+
T Consensus 58 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-- 135 (276)
T PRK05875 58 GAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVR-- 135 (276)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--
Confidence 467888999999999999999999999999999999997643 2344444 667777777777777777666665533
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 136 -------------------------------------------------------------------------------- 135 (276)
T PRK05875 136 -------------------------------------------------------------------------------- 135 (276)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
++.|+|+++||..+... ..+..+|+++|+++
T Consensus 136 ---------~~~g~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 166 (276)
T PRK05875 136 ---------GGGGSFVGISSIAASNT----------------------------------------HRWFGAYGVTKSAV 166 (276)
T ss_pred ---------cCCcEEEEEechhhcCC----------------------------------------CCCCcchHHHHHHH
Confidence 11256666666655431 12335699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+++.+++++... ||++++|.||+++|++...
T Consensus 167 ~~~~~~~~~~~~~~----~i~v~~i~Pg~v~t~~~~~ 199 (276)
T PRK05875 167 DHLMKLAADELGPS----WVRVNSIRPGLIRTDLVAP 199 (276)
T ss_pred HHHHHHHHHHhccc----CeEEEEEecCccCCccccc
Confidence 99998888887665 9999999999999998654
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.2e-17 Score=151.05 Aligned_cols=139 Identities=26% Similarity=0.317 Sum_probs=107.4
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.++.+|++|.++++++++.+.+ +|++|++|||||+....++.+.+ +++++.+++|+.+++.+++++.+.|++.
T Consensus 52 ~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~- 129 (263)
T PRK09072 52 PGRHRWVVADLTSEAGREAVLARARE-MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQ- 129 (263)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHh-cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-
Confidence 55788899999999999999999876 89999999999987655555554 7777777777777777666666655431
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 130 -------------------------------------------------------------------------------- 129 (263)
T PRK09072 130 -------------------------------------------------------------------------------- 129 (263)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+.++|+++||..+... ..+...|+.+|+++
T Consensus 130 ----------~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 159 (263)
T PRK09072 130 ----------PSAMVVNVGSTFGSIG----------------------------------------YPGYASYCASKFAL 159 (263)
T ss_pred ----------CCCEEEEecChhhCcC----------------------------------------CCCccHHHHHHHHH
Confidence 1256777777665431 12335699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
..+++.++.++.+. ||+|++|+||+++|++..
T Consensus 160 ~~~~~~l~~~~~~~----~i~v~~v~Pg~~~t~~~~ 191 (263)
T PRK09072 160 RGFSEALRRELADT----GVRVLYLAPRATRTAMNS 191 (263)
T ss_pred HHHHHHHHHHhccc----CcEEEEEecCcccccchh
Confidence 99998888887765 999999999999999854
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.9e-18 Score=157.53 Aligned_cols=84 Identities=27% Similarity=0.414 Sum_probs=58.6
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC--
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP-- 84 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~-- 84 (313)
+.++.+++||++|.++++++++.+.+++|++|+||||||+.... ...+ +.|+..+++|+.+++.+++.+.+.|++
T Consensus 66 ~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~ 143 (306)
T PRK06197 66 GADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP 143 (306)
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC
Confidence 45678899999999999999999999999999999999986532 1222 455555555555555555555555543
Q ss_pred CceEEEEec
Q psy2266 85 HARVVNVAS 93 (313)
Q Consensus 85 ~g~IV~isS 93 (313)
+++||++||
T Consensus 144 ~~~iV~vSS 152 (306)
T PRK06197 144 GSRVVTVSS 152 (306)
T ss_pred CCEEEEECC
Confidence 234444444
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.8e-17 Score=149.20 Aligned_cols=77 Identities=25% Similarity=0.354 Sum_probs=59.5
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
.+.++.++.||++|.++++++++.+.+.++++|++|||||+... .+..+.+ ++|++++++|+.+++.+++++.+.|+
T Consensus 44 ~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 122 (248)
T PRK10538 44 LGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMV 122 (248)
T ss_pred hccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 35578889999999999999999999999999999999998642 2344444 77777777777777666666666553
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.5e-17 Score=147.43 Aligned_cols=135 Identities=24% Similarity=0.284 Sum_probs=101.9
Q ss_pred eEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEE
Q psy2266 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVN 90 (313)
Q Consensus 12 ~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~ 90 (313)
.++.+|++|.++++++++.+.+.+ ++|++|||||.....++.+.+ ++|++.+++|+.+++.+.+++.+.|++.
T Consensus 44 ~~~~~D~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----- 117 (234)
T PRK07577 44 ELFACDLADIEQTAATLAQINEIH-PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR----- 117 (234)
T ss_pred eEEEeeCCCHHHHHHHHHHHHHhC-CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----
Confidence 467899999999999999998876 689999999987665554444 6677777666666666666666655431
Q ss_pred EecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHH
Q psy2266 91 VASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHI 170 (313)
Q Consensus 91 isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 170 (313)
T Consensus 118 -------------------------------------------------------------------------------- 117 (234)
T PRK07577 118 -------------------------------------------------------------------------------- 117 (234)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHH
Q psy2266 171 LFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLS 250 (313)
Q Consensus 171 ~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~ 250 (313)
+.++||++||..... .....+|++||+++..++
T Consensus 118 ------~~~~iv~~sS~~~~~-----------------------------------------~~~~~~Y~~sK~a~~~~~ 150 (234)
T PRK07577 118 ------EQGRIVNICSRAIFG-----------------------------------------ALDRTSYSAAKSALVGCT 150 (234)
T ss_pred ------CCcEEEEEccccccC-----------------------------------------CCCchHHHHHHHHHHHHH
Confidence 125677777664211 122346999999999999
Q ss_pred HHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 251 FIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 251 ~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+.++.++.+. ||++++|+||+++|++.+.
T Consensus 151 ~~~a~e~~~~----gi~v~~i~pg~~~t~~~~~ 179 (234)
T PRK07577 151 RTWALELAEY----GITVNAVAPGPIETELFRQ 179 (234)
T ss_pred HHHHHHHHhh----CcEEEEEecCcccCccccc
Confidence 9998888765 9999999999999998654
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.5e-17 Score=148.24 Aligned_cols=143 Identities=22% Similarity=0.302 Sum_probs=111.4
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
..+.++.++.+|+++.++++++++.+.++++++|++|||||......+.+.+ ++|++.+++|+.+++.+++++.+.|.+
T Consensus 53 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 132 (239)
T PRK07666 53 AYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIE 132 (239)
T ss_pred HhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 3456788899999999999999999999999999999999987655554444 778888887777777777777666533
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 133 ~------------------------------------------------------------------------------- 133 (239)
T PRK07666 133 R------------------------------------------------------------------------------- 133 (239)
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
..+++|++||..+... ..+...|+.+|+
T Consensus 134 ------------~~~~iv~~ss~~~~~~----------------------------------------~~~~~~Y~~sK~ 161 (239)
T PRK07666 134 ------------QSGDIINISSTAGQKG----------------------------------------AAVTSAYSASKF 161 (239)
T ss_pred ------------CCcEEEEEcchhhccC----------------------------------------CCCCcchHHHHH
Confidence 1256666666665431 223346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.++.++.+. ||++++|.||++.|++...
T Consensus 162 a~~~~~~~~a~e~~~~----gi~v~~v~pg~v~t~~~~~ 196 (239)
T PRK07666 162 GVLGLTESLMQEVRKH----NIRVTALTPSTVATDMAVD 196 (239)
T ss_pred HHHHHHHHHHHHhhcc----CcEEEEEecCcccCcchhh
Confidence 9999999988888655 9999999999999998553
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.6e-17 Score=151.59 Aligned_cols=141 Identities=22% Similarity=0.266 Sum_probs=107.9
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.++++|++|.++++++++.+.+.++++|+||||||+....+..+.+ ++|++.+++|+.+++.+++++.|.|++.
T Consensus 47 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~- 125 (276)
T PRK06482 47 GDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ- 125 (276)
T ss_pred cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-
Confidence 45678899999999999999999999999999999999998766555544 6677777777777666666666655431
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 126 -------------------------------------------------------------------------------- 125 (276)
T PRK06482 126 -------------------------------------------------------------------------------- 125 (276)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
..++||++||..+... ..+...|++||+++
T Consensus 126 ----------~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 155 (276)
T PRK06482 126 ----------GGGRIVQVSSEGGQIA----------------------------------------YPGFSLYHATKWGI 155 (276)
T ss_pred ----------CCCEEEEEcCcccccC----------------------------------------CCCCchhHHHHHHH
Confidence 1256667666655331 22335699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+++.++.++... ||+++.+.||.+.|++...
T Consensus 156 ~~~~~~l~~~~~~~----gi~v~~v~pg~~~t~~~~~ 188 (276)
T PRK06482 156 EGFVEAVAQEVAPF----GIEFTIVEPGPARTNFGAG 188 (276)
T ss_pred HHHHHHHHHHhhcc----CcEEEEEeCCccccCCccc
Confidence 99998888877654 9999999999999998654
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.5e-17 Score=148.51 Aligned_cols=141 Identities=19% Similarity=0.207 Sum_probs=105.1
Q ss_pred CceeEEEeecCC--HHHHHHHHHHHHHHc-CCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 9 NNVRFHQLDILD--QSSIHKLHDDIQTQH-GGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 9 ~~~~~~~~Dvs~--~~~v~~~~~~v~~~~-g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
.++..+.+|+++ .+++.++++.+.+.+ +++|++|||||.... .++.+.+ ++|++.+++|+.+++.+++++.+.|+
T Consensus 56 ~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~ 135 (239)
T PRK08703 56 PEPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLK 135 (239)
T ss_pred CCcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 356778999975 568899999998888 899999999998643 3455554 77777777777777776666666553
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 136 ~~------------------------------------------------------------------------------ 137 (239)
T PRK08703 136 QS------------------------------------------------------------------------------ 137 (239)
T ss_pred hC------------------------------------------------------------------------------
Confidence 31
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++++++++||..+..+ ..+..+|++||
T Consensus 138 -------------~~~~iv~~ss~~~~~~----------------------------------------~~~~~~Y~~sK 164 (239)
T PRK08703 138 -------------PDASVIFVGESHGETP----------------------------------------KAYWGGFGASK 164 (239)
T ss_pred -------------CCCEEEEEeccccccC----------------------------------------CCCccchHHhH
Confidence 1356777777665431 22335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+|+..+++.++.++... .+|+|++|+||+|+||+...
T Consensus 165 aa~~~~~~~la~e~~~~---~~i~v~~v~pG~v~t~~~~~ 201 (239)
T PRK08703 165 AALNYLCKVAADEWERF---GNLRANVLVPGPINSPQRIK 201 (239)
T ss_pred HHHHHHHHHHHHHhccC---CCeEEEEEecCcccCccccc
Confidence 99999999998887653 26999999999999998654
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.5e-17 Score=162.75 Aligned_cols=137 Identities=30% Similarity=0.467 Sum_probs=108.7
Q ss_pred eEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEE
Q psy2266 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVN 90 (313)
Q Consensus 12 ~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~ 90 (313)
..++||++|.++++++++.+.+++|++|++|||||+.....+.+++ ++|+.++++|+.+++.+++++.+.+
T Consensus 259 ~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~-------- 330 (450)
T PRK08261 259 TALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAG-------- 330 (450)
T ss_pred eEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhh--------
Confidence 5788999999999999999999999999999999998766665555 7788888777777777777666522
Q ss_pred EecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHH
Q psy2266 91 VASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHI 170 (313)
Q Consensus 91 isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 170 (313)
T Consensus 331 -------------------------------------------------------------------------------- 330 (450)
T PRK08261 331 -------------------------------------------------------------------------------- 330 (450)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHH
Q psy2266 171 LFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLS 250 (313)
Q Consensus 171 ~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~ 250 (313)
.++++++||++||..+.. +..+...|+++|+++..++
T Consensus 331 ---~~~~~g~iv~~SS~~~~~----------------------------------------g~~~~~~Y~asKaal~~~~ 367 (450)
T PRK08261 331 ---ALGDGGRIVGVSSISGIA----------------------------------------GNRGQTNYAASKAGVIGLV 367 (450)
T ss_pred ---hhcCCCEEEEECChhhcC----------------------------------------CCCCChHHHHHHHHHHHHH
Confidence 223346677777766543 1223456999999999999
Q ss_pred HHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 251 FIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 251 ~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+.++.++.+. ||++|+|+||+++|++...
T Consensus 368 ~~la~el~~~----gi~v~~v~PG~i~t~~~~~ 396 (450)
T PRK08261 368 QALAPLLAER----GITINAVAPGFIETQMTAA 396 (450)
T ss_pred HHHHHHHhhh----CcEEEEEEeCcCcchhhhc
Confidence 9998888765 9999999999999998764
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.8e-17 Score=148.56 Aligned_cols=141 Identities=24% Similarity=0.277 Sum_probs=107.9
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++..++||++|.++++++++.+.++++++|+||||||........+.+ ++|++++++|+.+++.+++++.+.|++.
T Consensus 52 ~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~- 130 (252)
T PRK06138 52 GGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ- 130 (252)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-
Confidence 45678899999999999999999999999999999999987655444443 6666666666666666666555544331
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 131 -------------------------------------------------------------------------------- 130 (252)
T PRK06138 131 -------------------------------------------------------------------------------- 130 (252)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+.++|+++||..+... ..+...|+.+|+++
T Consensus 131 ----------~~~~ii~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 160 (252)
T PRK06138 131 ----------GGGSIVNTASQLALAG----------------------------------------GRGRAAYVASKGAI 160 (252)
T ss_pred ----------CCeEEEEECChhhccC----------------------------------------CCCccHHHHHHHHH
Confidence 1256777777765431 22335699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+++.++.++... ||++++|+||++.|++...
T Consensus 161 ~~~~~~l~~~~~~~----~i~v~~v~pg~~~t~~~~~ 193 (252)
T PRK06138 161 ASLTRAMALDHATD----GIRVNAVAPGTIDTPYFRR 193 (252)
T ss_pred HHHHHHHHHHHHhc----CeEEEEEEECCccCcchhh
Confidence 99999998887755 9999999999999998654
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.8e-17 Score=149.91 Aligned_cols=78 Identities=23% Similarity=0.290 Sum_probs=63.7
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++.++.||++|.+++.++++.+.+.+|++|+||||||.....++.+.+ ++|++++++|+.+++.+++++.+.|++
T Consensus 57 ~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 135 (258)
T PRK09134 57 LGRRAVALQADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPA 135 (258)
T ss_pred cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 356788899999999999999999999999999999999987655555554 778888887877777777777766543
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.5e-17 Score=154.72 Aligned_cols=89 Identities=25% Similarity=0.349 Sum_probs=72.2
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
+.++.++.+|++|.++++++++.+.+.+++||+||||||+.... .....+ ++|+.++++|+.+++.+++++.|.|++.
T Consensus 54 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 133 (322)
T PRK07453 54 PDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKS 133 (322)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhC
Confidence 45678899999999999999999888788999999999986532 222333 8899999999999999999999988642
Q ss_pred ----ceEEEEecccc
Q psy2266 86 ----ARVVNVASKLG 96 (313)
Q Consensus 86 ----g~IV~isS~~~ 96 (313)
++||++||...
T Consensus 134 ~~~~~riV~vsS~~~ 148 (322)
T PRK07453 134 PAPDPRLVILGTVTA 148 (322)
T ss_pred CCCCceEEEEccccc
Confidence 47888877653
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.6e-17 Score=148.42 Aligned_cols=148 Identities=26% Similarity=0.300 Sum_probs=112.9
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD--TAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~--~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
.+.++.++.+|+++++++.++++.+.+.+|++|++|||||.... .++.+.+ ++|++++++|+.+++.+++++.+.|+
T Consensus 50 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 129 (256)
T PRK12745 50 LGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRML 129 (256)
T ss_pred cCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 35578899999999999999999999999999999999998643 2344444 77888887777777777777777665
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+..+
T Consensus 130 ~~~~---------------------------------------------------------------------------- 133 (256)
T PRK12745 130 AQPE---------------------------------------------------------------------------- 133 (256)
T ss_pred hccC----------------------------------------------------------------------------
Confidence 4110
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+.-...++|+++||..+... ..+...|++||
T Consensus 134 ---------~~~~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK 164 (256)
T PRK12745 134 ---------PEELPHRSIVFVSSVNAIMV----------------------------------------SPNRGEYCISK 164 (256)
T ss_pred ---------cCCCCCcEEEEECChhhccC----------------------------------------CCCCcccHHHH
Confidence 00000256888888877541 22334699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+++..+++.++.++.+. ||++++|+||++.|++...
T Consensus 165 ~a~~~~~~~l~~~~~~~----gi~v~~i~pg~v~t~~~~~ 200 (256)
T PRK12745 165 AGLSMAAQLFAARLAEE----GIGVYEVRPGLIKTDMTAP 200 (256)
T ss_pred HHHHHHHHHHHHHHHHh----CCEEEEEecCCCcCccccc
Confidence 99999999999888765 9999999999999998654
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.9e-17 Score=148.98 Aligned_cols=139 Identities=25% Similarity=0.349 Sum_probs=104.9
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHc------CCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQH------GGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~------g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
+.++.++++|++|.+++.++++.+.+++ +++|++|||||......+.+.+ +.|+.++++|+.+++.+++++.+
T Consensus 55 ~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 134 (254)
T PRK12746 55 GGKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLP 134 (254)
T ss_pred CCcEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4567889999999999999999998887 5799999999987655444444 66677766666666666665555
Q ss_pred cccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcc
Q psy2266 81 LLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATN 160 (313)
Q Consensus 81 ~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N 160 (313)
.|
T Consensus 135 ~~------------------------------------------------------------------------------ 136 (254)
T PRK12746 135 LL------------------------------------------------------------------------------ 136 (254)
T ss_pred Hh------------------------------------------------------------------------------
Confidence 44
Q ss_pred cccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchh
Q psy2266 161 FFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYS 240 (313)
Q Consensus 161 ~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 240 (313)
++.+++|++||..+... ..+...|+
T Consensus 137 ---------------~~~~~~v~~sS~~~~~~----------------------------------------~~~~~~Y~ 161 (254)
T PRK12746 137 ---------------RAEGRVINISSAEVRLG----------------------------------------FTGSIAYG 161 (254)
T ss_pred ---------------hcCCEEEEECCHHhcCC----------------------------------------CCCCcchH
Confidence 33455666666554331 12334699
Q ss_pred hhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 241 VSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 241 ~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+||+++..+++.+++++.+. ||++++|+||+++|++.+.
T Consensus 162 ~sK~a~~~~~~~~~~~~~~~----~i~v~~v~pg~~~t~~~~~ 200 (254)
T PRK12746 162 LSKGALNTMTLPLAKHLGER----GITVNTIMPGYTKTDINAK 200 (254)
T ss_pred hhHHHHHHHHHHHHHHHhhc----CcEEEEEEECCccCcchhh
Confidence 99999999999988887655 9999999999999998654
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.3e-17 Score=147.07 Aligned_cols=142 Identities=26% Similarity=0.224 Sum_probs=104.9
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
+.++.+++||++|.++++++++.+.++++++|++|||||+.... ++.+.+ ++|++.+++|+.+++.+++.+.+.|++
T Consensus 52 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~- 130 (251)
T PRK07231 52 GGRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRG- 130 (251)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh-
Confidence 35578899999999999999999999999999999999986533 333333 566666655555555555555554432
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 131 -------------------------------------------------------------------------------- 130 (251)
T PRK07231 131 -------------------------------------------------------------------------------- 130 (251)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
...++||++||..+... ..+...|+.+|++
T Consensus 131 ----------~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~y~~sk~~ 160 (251)
T PRK07231 131 ----------EGGGAIVNVASTAGLRP----------------------------------------RPGLGWYNASKGA 160 (251)
T ss_pred ----------cCCcEEEEEcChhhcCC----------------------------------------CCCchHHHHHHHH
Confidence 11256777777665431 2233469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
+..+++.++.++++. ||++++++||+++|++....
T Consensus 161 ~~~~~~~~a~~~~~~----~i~v~~i~pg~~~t~~~~~~ 195 (251)
T PRK07231 161 VITLTKALAAELGPD----KIRVNAVAPVVVETGLLEAF 195 (251)
T ss_pred HHHHHHHHHHHhhhh----CeEEEEEEECccCCCcchhh
Confidence 999998888887655 99999999999999986653
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.3e-17 Score=146.12 Aligned_cols=144 Identities=24% Similarity=0.279 Sum_probs=108.7
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++..++||++|+++++++++.+.++++++|++|||||.... ....+.+ ++|+..+++|+.+++.+++++.+.|.+
T Consensus 49 ~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 128 (247)
T PRK09730 49 AGGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMAL 128 (247)
T ss_pred CCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 35567889999999999999999999999999999999998643 3444444 777777777777777777766665533
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
...
T Consensus 129 ~~~----------------------------------------------------------------------------- 131 (247)
T PRK09730 129 KHG----------------------------------------------------------------------------- 131 (247)
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 100
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCC-CCchhhhH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWP-EFSYSVSK 243 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK 243 (313)
.++|++|++||..+... .++ ...|+++|
T Consensus 132 -----------~~~g~~v~~sS~~~~~~----------------------------------------~~~~~~~Y~~sK 160 (247)
T PRK09730 132 -----------GSGGAIVNVSSAASRLG----------------------------------------APGEYVDYAASK 160 (247)
T ss_pred -----------CCCcEEEEECchhhccC----------------------------------------CCCcccchHhHH
Confidence 01266788888766441 111 13599999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+++..+++.++.++.+. ||++++|+||++.||+..
T Consensus 161 ~~~~~~~~~l~~~~~~~----~i~v~~i~pg~~~~~~~~ 195 (247)
T PRK09730 161 GAIDTLTTGLSLEVAAQ----GIRVNCVRPGFIYTEMHA 195 (247)
T ss_pred HHHHHHHHHHHHHHHHh----CeEEEEEEeCCCcCcccc
Confidence 99999999988887765 999999999999999754
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3e-17 Score=148.63 Aligned_cols=143 Identities=19% Similarity=0.285 Sum_probs=102.7
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCC--Cc--EEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHH
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGG--LD--LLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILF 79 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~--iD--ilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~ 79 (313)
+.+.++++++||+++.++++++++.+.+.++. ++ ++|||||.... ..+.+++ ++|++.+
T Consensus 45 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~--------------- 109 (251)
T PRK06924 45 QYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNV--------------- 109 (251)
T ss_pred ccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHh---------------
Confidence 34567889999999999999999999877763 22 89999998643 3444444 5555555
Q ss_pred hcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhc
Q psy2266 80 PLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLAT 159 (313)
Q Consensus 80 ~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~ 159 (313)
++
T Consensus 110 ------------------------------------------------------------------------------~~ 111 (251)
T PRK06924 110 ------------------------------------------------------------------------------HL 111 (251)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 45
Q ss_pred ccccHHHHHHHHhhcccC---CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCC
Q psy2266 160 NFFALVTVCHILFPLLRP---HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPE 236 (313)
Q Consensus 160 N~~g~~~~~~~~~p~l~~---~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
|+.|++.+++.++|.|++ +++||++||..+.. ...+.
T Consensus 112 n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------------------------------~~~~~ 151 (251)
T PRK06924 112 NLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN----------------------------------------PYFGW 151 (251)
T ss_pred ceehHHHHHHHHHHHHhccCCCceEEEecchhhcC----------------------------------------CCCCc
Confidence 555555555555555533 25777887766543 12234
Q ss_pred CchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 237 FSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 237 ~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.+|+++|+|+..+++.++.++..+ ++||+|++|+||+++|++...
T Consensus 152 ~~Y~~sKaa~~~~~~~la~e~~~~--~~~i~v~~v~Pg~v~t~~~~~ 196 (251)
T PRK06924 152 SAYCSSKAGLDMFTQTVATEQEEE--EYPVKIVAFSPGVMDTNMQAQ 196 (251)
T ss_pred HHHhHHHHHHHHHHHHHHHHhhhc--CCCeEEEEecCCccccHhHHH
Confidence 569999999999999999887633 458999999999999998543
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.8e-17 Score=147.63 Aligned_cols=138 Identities=15% Similarity=0.154 Sum_probs=98.2
Q ss_pred CCCceeEEEeecCCHHHHHHHHHH-HHHHc---CCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDD-IQTQH---GGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~-v~~~~---g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
.+.++.++++|+++.++++++++. +.+++ +++|++|||||+... .++.+.+ ++|++.+++|+.++
T Consensus 43 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~--------- 113 (243)
T PRK07023 43 AGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAP--------- 113 (243)
T ss_pred cCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHH---------
Confidence 355788899999999999998876 55555 479999999998654 2343433 55555555555554
Q ss_pred cccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcc
Q psy2266 81 LLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATN 160 (313)
Q Consensus 81 ~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N 160 (313)
T Consensus 114 -------------------------------------------------------------------------------- 113 (243)
T PRK07023 114 -------------------------------------------------------------------------------- 113 (243)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccHHHHHHHHhhcccC--CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCc
Q psy2266 161 FFALVTVCHILFPLLRP--HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFS 238 (313)
Q Consensus 161 ~~g~~~~~~~~~p~l~~--~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
+.+++.++|.|++ .++||++||..+.. +..+...
T Consensus 114 ----~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------------------------------------~~~~~~~ 149 (243)
T PRK07023 114 ----LMLTAALAQAASDAAERRILHISSGAARN----------------------------------------AYAGWSV 149 (243)
T ss_pred ----HHHHHHHHHHhhccCCCEEEEEeChhhcC----------------------------------------CCCCchH
Confidence 4455555554432 36777777766543 1223356
Q ss_pred hhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 239 Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
|+++|+++..+++.++.+ .. .||++++|+||+++|++..
T Consensus 150 Y~~sK~a~~~~~~~~~~~-~~----~~i~v~~v~pg~~~t~~~~ 188 (243)
T PRK07023 150 YCATKAALDHHARAVALD-AN----RALRIVSLAPGVVDTGMQA 188 (243)
T ss_pred HHHHHHHHHHHHHHHHhc-CC----CCcEEEEecCCccccHHHH
Confidence 999999999999888777 33 4999999999999999854
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.2e-17 Score=147.62 Aligned_cols=143 Identities=17% Similarity=0.209 Sum_probs=106.1
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc-
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL- 82 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m- 82 (313)
++.+.++.++++|++|.++++++++.+.+.+|++|+||||||........+.+ ++|+..+++|+.+++.+++++++.|
T Consensus 52 ~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~ 131 (262)
T PRK13394 52 NKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMY 131 (262)
T ss_pred HhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 34466788899999999999999999999999999999999987655444433 6666666666666666555555554
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++.
T Consensus 132 ~~~----------------------------------------------------------------------------- 134 (262)
T PRK13394 132 KDD----------------------------------------------------------------------------- 134 (262)
T ss_pred hhc-----------------------------------------------------------------------------
Confidence 221
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
+.++||++||..+... ..+...|+++
T Consensus 135 --------------~~~~iv~~ss~~~~~~----------------------------------------~~~~~~y~~s 160 (262)
T PRK13394 135 --------------RGGVVIYMGSVHSHEA----------------------------------------SPLKSAYVTA 160 (262)
T ss_pred --------------CCcEEEEEcchhhcCC----------------------------------------CCCCcccHHH
Confidence 1256777777655431 1223469999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
|+++..+++.++.++... ||++|+|.||++.|++..
T Consensus 161 k~a~~~~~~~la~~~~~~----~i~v~~v~pg~v~~~~~~ 196 (262)
T PRK13394 161 KHGLLGLARVLAKEGAKH----NVRSHVVCPGFVRTPLVD 196 (262)
T ss_pred HHHHHHHHHHHHHHhhhc----CeEEEEEeeCcccchhhh
Confidence 999999998888887654 999999999999999754
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.5e-17 Score=146.03 Aligned_cols=138 Identities=24% Similarity=0.243 Sum_probs=106.2
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.++..+++|+.|.+++.++++.+.++++++|++|||||......+.+.+ ++|...+++|+.+++.+.+++.+.|++
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--- 125 (257)
T PRK07074 49 ARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLK--- 125 (257)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH---
Confidence 4578899999999999999999999999999999999997655444444 677777777777776666666555432
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 126 -------------------------------------------------------------------------------- 125 (257)
T PRK07074 126 -------------------------------------------------------------------------------- 125 (257)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
++.++|+++||..+.. ..+...|+.+|+++.
T Consensus 126 --------~~~~~iv~~sS~~~~~-----------------------------------------~~~~~~y~~sK~a~~ 156 (257)
T PRK07074 126 --------RSRGAVVNIGSVNGMA-----------------------------------------ALGHPAYSAAKAGLI 156 (257)
T ss_pred --------cCCeEEEEEcchhhcC-----------------------------------------CCCCcccHHHHHHHH
Confidence 1125677777755432 112246999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
.+++.++.++.+. ||+|+++.||++.|++..
T Consensus 157 ~~~~~~a~~~~~~----gi~v~~v~pg~v~t~~~~ 187 (257)
T PRK07074 157 HYTKLLAVEYGRF----GIRANAVAPGTVKTQAWE 187 (257)
T ss_pred HHHHHHHHHHhHh----CeEEEEEEeCcCCcchhh
Confidence 9999998888765 999999999999999754
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.2e-17 Score=144.47 Aligned_cols=171 Identities=18% Similarity=0.131 Sum_probs=123.4
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC--Cc---
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG--SF--- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~--~~--- 149 (313)
++++..+ +.|.+|+.+++..................+|..++++++++++.+.+ +++|++++|||..... ++
T Consensus 15 ~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi~~ag~~~~~~~~~~~~ 92 (225)
T PRK08177 15 LGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQG--QRFDLLFVNAGISGPAHQSAADA 92 (225)
T ss_pred HHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhc--CCCCEEEEcCcccCCCCCCcccC
Confidence 3344333 34678888876644332211111112245677799999999888753 6899999999986442 22
Q ss_pred -chhhhhhhhcccccHHHHHHHHhhcccCC-CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhc
Q psy2266 150 -GQRAETTLATNFFALVTVCHILFPLLRPH-ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEG 227 (313)
Q Consensus 150 -~~~~~~~~~~N~~g~~~~~~~~~p~l~~~-g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (313)
.++++..+++|+.+++.+++.++|.|+++ +.|+++||..+.....+
T Consensus 93 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~-------------------------------- 140 (225)
T PRK08177 93 TAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPD-------------------------------- 140 (225)
T ss_pred CHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCC--------------------------------
Confidence 36788999999999999999999999876 88999999877542111
Q ss_pred ccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCc
Q psy2266 228 KDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTP 289 (313)
Q Consensus 228 ~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~ 289 (313)
..+..+|+++|+++..+++.++.++.+. ||+||+|+||+++|++.......++
T Consensus 141 -----~~~~~~Y~~sK~a~~~~~~~l~~e~~~~----~i~v~~i~PG~i~t~~~~~~~~~~~ 193 (225)
T PRK08177 141 -----GGEMPLYKASKAALNSMTRSFVAELGEP----TLTVLSMHPGWVKTDMGGDNAPLDV 193 (225)
T ss_pred -----CCCccchHHHHHHHHHHHHHHHHHhhcC----CeEEEEEcCCceecCCCCCCCCCCH
Confidence 1233469999999999998888887754 9999999999999999776433333
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.6e-17 Score=146.25 Aligned_cols=83 Identities=18% Similarity=0.175 Sum_probs=61.1
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC---CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC--
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD---TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP-- 84 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~---~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~-- 84 (313)
+.+++||++|++++.++++.+.+++|++|+||||||.... ..+.+.+ ++|+..+++|+.+++.+++++.+.|++
T Consensus 57 ~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 136 (256)
T PRK09186 57 LSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG 136 (256)
T ss_pred eeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC
Confidence 4566999999999999999999999999999999986532 2344444 777777777777777777777666643
Q ss_pred CceEEEEec
Q psy2266 85 HARVVNVAS 93 (313)
Q Consensus 85 ~g~IV~isS 93 (313)
.++||++||
T Consensus 137 ~~~iv~~sS 145 (256)
T PRK09186 137 GGNLVNISS 145 (256)
T ss_pred CceEEEEec
Confidence 234444444
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.1e-17 Score=146.68 Aligned_cols=139 Identities=24% Similarity=0.361 Sum_probs=105.2
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++..+.||++|++++.++++.+.++++++|+||||||........+.+ ++++..+
T Consensus 51 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~--------------------- 109 (258)
T PRK12429 51 AGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMI--------------------- 109 (258)
T ss_pred cCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHH---------------------
Confidence 456788899999999999999999999999999999999987655443333 5555555
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
++|+.|++
T Consensus 110 ------------------------------------------------------------------------~~n~~~~~ 117 (258)
T PRK12429 110 ------------------------------------------------------------------------AIMLDGAF 117 (258)
T ss_pred ------------------------------------------------------------------------hhcchhhH
Confidence 45555555
Q ss_pred HHHHHHhhcccC--CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 166 TVCHILFPLLRP--HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 166 ~~~~~~~p~l~~--~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
.+++.++|.|++ .++||++||..+... ..+...|+++|
T Consensus 118 ~l~~~~~~~~~~~~~~~iv~iss~~~~~~----------------------------------------~~~~~~y~~~k 157 (258)
T PRK12429 118 LTTKAALPIMKAQGGGRIINMASVHGLVG----------------------------------------SAGKAAYVSAK 157 (258)
T ss_pred HHHHHHHHHHHhcCCeEEEEEcchhhccC----------------------------------------CCCcchhHHHH
Confidence 555555555533 367888888766541 22345699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+++..+++.++.++... ||++++++||++.|++..
T Consensus 158 ~a~~~~~~~l~~~~~~~----~i~v~~~~pg~v~~~~~~ 192 (258)
T PRK12429 158 HGLIGLTKVVALEGATH----GVTVNAICPGYVDTPLVR 192 (258)
T ss_pred HHHHHHHHHHHHHhccc----CeEEEEEecCCCcchhhh
Confidence 99999998888877644 999999999999998864
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.9e-17 Score=148.80 Aligned_cols=141 Identities=16% Similarity=0.206 Sum_probs=107.0
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.++.+|+++.+++.++++.+.+.+|++|++|||||+.......+.+ +.|+..+++|+.+++.+++++++.|++
T Consensus 57 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~- 135 (274)
T PRK07775 57 DGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIE- 135 (274)
T ss_pred cCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-
Confidence 356788889999999999999999999999999999999987655444444 677777777777776666666655432
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 136 -------------------------------------------------------------------------------- 135 (274)
T PRK07775 136 -------------------------------------------------------------------------------- 135 (274)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+..|+||++||..+... ..+...|+++|++
T Consensus 136 ----------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a 165 (274)
T PRK07775 136 ----------RRRGDLIFVGSDVALRQ----------------------------------------RPHMGAYGAAKAG 165 (274)
T ss_pred ----------cCCceEEEECChHhcCC----------------------------------------CCCcchHHHHHHH
Confidence 11256777777655431 1223469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+..+++.+++++... ||++++|+||+++|++..
T Consensus 166 ~~~l~~~~~~~~~~~----gi~v~~v~pG~~~t~~~~ 198 (274)
T PRK07775 166 LEAMVTNLQMELEGT----GVRASIVHPGPTLTGMGW 198 (274)
T ss_pred HHHHHHHHHHHhccc----CeEEEEEeCCcccCcccc
Confidence 999998888877654 999999999999999743
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1e-16 Score=144.26 Aligned_cols=142 Identities=27% Similarity=0.389 Sum_probs=108.7
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHH-hcccC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILF-PLLRP 84 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~-~~m~~ 84 (313)
.+.++.++.||++|.++++++++.+.++++++|++|||||+.....+.+.+ ++|++.+++|+.+++.+++++. +.|++
T Consensus 57 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (249)
T PRK12827 57 AGGKALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRA 136 (249)
T ss_pred cCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc
Confidence 355778899999999999999999999999999999999997765555544 6677777666666666666665 33332
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 137 ~------------------------------------------------------------------------------- 137 (249)
T PRK12827 137 R------------------------------------------------------------------------------- 137 (249)
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
..+++|++||..+... ..+...|+.+|+
T Consensus 138 ------------~~~~iv~~sS~~~~~~----------------------------------------~~~~~~y~~sK~ 165 (249)
T PRK12827 138 ------------RGGRIVNIASVAGVRG----------------------------------------NRGQVNYAASKA 165 (249)
T ss_pred ------------CCeEEEEECCchhcCC----------------------------------------CCCCchhHHHHH
Confidence 1256777777666541 123356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.++.++.+. ||++++|+||+++|++...
T Consensus 166 a~~~~~~~l~~~~~~~----~i~~~~i~pg~v~t~~~~~ 200 (249)
T PRK12827 166 GLIGLTKTLANELAPR----GITVNAVAPGAINTPMADN 200 (249)
T ss_pred HHHHHHHHHHHHhhhh----CcEEEEEEECCcCCCcccc
Confidence 9999999988887655 9999999999999998654
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.9e-17 Score=145.75 Aligned_cols=83 Identities=19% Similarity=0.173 Sum_probs=61.4
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.+++||++|.++++++++.+. ..+|++|||||..........+ ++|++++++|+.+++.+++++.|.|++++
T Consensus 45 ~~~~~~~~~D~~~~~~~~~~~~~~~---~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 121 (240)
T PRK06101 45 SANIFTLAFDVTDHPGTKAALSQLP---FIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGH 121 (240)
T ss_pred cCCCeEEEeeCCCHHHHHHHHHhcc---cCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 3467889999999999999888764 2589999999976433333344 88999998888888888887777665544
Q ss_pred eEEEEec
Q psy2266 87 RVVNVAS 93 (313)
Q Consensus 87 ~IV~isS 93 (313)
+||+++|
T Consensus 122 ~iv~isS 128 (240)
T PRK06101 122 RVVIVGS 128 (240)
T ss_pred eEEEEec
Confidence 5554444
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.1e-17 Score=148.12 Aligned_cols=138 Identities=28% Similarity=0.373 Sum_probs=106.6
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.++.++.||++|.+++++ ++.+.+++|++|++|||||........+.+ ++|++.+++|+.+++.+++++.+.|++.
T Consensus 54 ~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-- 130 (280)
T PRK06914 54 QNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-- 130 (280)
T ss_pred CceeEEecCCCCHHHHHH-HHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--
Confidence 568889999999999999 999988999999999999987766555554 7777777777777766666666655331
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 131 -------------------------------------------------------------------------------- 130 (280)
T PRK06914 131 -------------------------------------------------------------------------------- 130 (280)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
+.++||++||..+... ..+...|++||+++.
T Consensus 131 ---------~~~~iv~vsS~~~~~~----------------------------------------~~~~~~Y~~sK~~~~ 161 (280)
T PRK06914 131 ---------KSGKIINISSISGRVG----------------------------------------FPGLSPYVSSKYALE 161 (280)
T ss_pred ---------CCCEEEEECcccccCC----------------------------------------CCCCchhHHhHHHHH
Confidence 1256777777655431 223356999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
.|++.++.++.+. ||+++++.||+++|++..
T Consensus 162 ~~~~~l~~~~~~~----~i~v~~v~pg~~~t~~~~ 192 (280)
T PRK06914 162 GFSESLRLELKPF----GIDVALIEPGSYNTNIWE 192 (280)
T ss_pred HHHHHHHHHhhhh----CCEEEEEecCCcccchhh
Confidence 9998888877655 999999999999999754
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1e-16 Score=146.35 Aligned_cols=140 Identities=25% Similarity=0.352 Sum_probs=107.8
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCh-h-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF-G-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~-~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++.++.+|++|.++++++++.+.++++++|++|||||......+.+. + ++|++.+++|+.+++.+++.+.+.|++
T Consensus 48 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 127 (263)
T PRK06181 48 HGGEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKA 127 (263)
T ss_pred cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 45678889999999999999999999999999999999998776555554 4 667777777777777666666655432
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 128 -------------------------------------------------------------------------------- 127 (263)
T PRK06181 128 -------------------------------------------------------------------------------- 127 (263)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
..++||++||..+... ..+...|+.+|+
T Consensus 128 ------------~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~ 155 (263)
T PRK06181 128 ------------SRGQIVVVSSLAGLTG----------------------------------------VPTRSGYAASKH 155 (263)
T ss_pred ------------cCCEEEEEecccccCC----------------------------------------CCCccHHHHHHH
Confidence 1255666666554331 123356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
++..+++.++.++... ||+++++.||++.|++.+
T Consensus 156 ~~~~~~~~l~~~~~~~----~i~~~~i~pg~v~t~~~~ 189 (263)
T PRK06181 156 ALHGFFDSLRIELADD----GVAVTVVCPGFVATDIRK 189 (263)
T ss_pred HHHHHHHHHHHHhhhc----CceEEEEecCccccCcch
Confidence 9999998888887655 999999999999999865
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-16 Score=142.86 Aligned_cols=141 Identities=23% Similarity=0.326 Sum_probs=108.2
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.++.+|++|.+++.++++.+.+.+|++|++|||||........+.+ ++|++.+++|+.+++.+++++.+.+++.
T Consensus 54 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~- 132 (247)
T PRK05565 54 GGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKR- 132 (247)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-
Confidence 45678899999999999999999999999999999999998544444444 6677777666666666666666555331
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 133 -------------------------------------------------------------------------------- 132 (247)
T PRK05565 133 -------------------------------------------------------------------------------- 132 (247)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+.+++|++||..+... .....+|+.+|+++
T Consensus 133 ----------~~~~~v~~sS~~~~~~----------------------------------------~~~~~~y~~sK~a~ 162 (247)
T PRK05565 133 ----------KSGVIVNISSIWGLIG----------------------------------------ASCEVLYSASKGAV 162 (247)
T ss_pred ----------CCcEEEEECCHhhccC----------------------------------------CCCccHHHHHHHHH
Confidence 1256777777665431 12334699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+++.++.++... ||++++|+||+++|++.+.
T Consensus 163 ~~~~~~~~~~~~~~----gi~~~~v~pg~v~t~~~~~ 195 (247)
T PRK05565 163 NAFTKALAKELAPS----GIRVNAVAPGAIDTEMWSS 195 (247)
T ss_pred HHHHHHHHHHHHHc----CeEEEEEEECCccCccccc
Confidence 99999998887755 9999999999999998765
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.1e-16 Score=142.82 Aligned_cols=138 Identities=24% Similarity=0.277 Sum_probs=101.7
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.+++||++++++++++++.+.+ .+|++|||||........+.+ +++.+.+++|+.+++.+++++.+.|++
T Consensus 50 ~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-- 124 (243)
T PRK07102 50 AVAVSTHELDILDTASHAAFLDSLPA---LPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEA-- 124 (243)
T ss_pred CCeEEEEecCCCChHHHHHHHHHHhh---cCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh--
Confidence 45788999999999999999888765 479999999987655444443 666666666666666666655555432
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 125 -------------------------------------------------------------------------------- 124 (243)
T PRK07102 125 -------------------------------------------------------------------------------- 124 (243)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
.+.++++++||..+... ..+...|+++|+++
T Consensus 125 ---------~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 155 (243)
T PRK07102 125 ---------RGSGTIVGISSVAGDRG----------------------------------------RASNYVYGSAKAAL 155 (243)
T ss_pred ---------CCCCEEEEEecccccCC----------------------------------------CCCCcccHHHHHHH
Confidence 11366777777665431 12334699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+++.++.++.+. ||++++|+||+++|++...
T Consensus 156 ~~~~~~l~~el~~~----gi~v~~v~pg~v~t~~~~~ 188 (243)
T PRK07102 156 TAFLSGLRNRLFKS----GVHVLTVKPGFVRTPMTAG 188 (243)
T ss_pred HHHHHHHHHHhhcc----CcEEEEEecCcccChhhhc
Confidence 99999988887765 9999999999999998665
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-16 Score=142.14 Aligned_cols=65 Identities=20% Similarity=0.310 Sum_probs=53.7
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHH
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCH 76 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~r 76 (313)
+.+++++.||++|.+++.++++. +|++|+||||||+....++.+.+ ++|++++++|+.+++.+++
T Consensus 44 ~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 109 (230)
T PRK07041 44 GAPVRTAALDITDEAAVDAFFAE----AGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR 109 (230)
T ss_pred CCceEEEEccCCCHHHHHHHHHh----cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 55688899999999999887764 58999999999997766665555 8888888888888888777
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-16 Score=143.74 Aligned_cols=139 Identities=24% Similarity=0.269 Sum_probs=103.5
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.+...+.||+++.++++++++.+.+.++++|++|||||.....++.+.+ +.|++.+++|+.+++.++++
T Consensus 54 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~-------- 125 (252)
T PRK06077 54 NGGEGIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQE-------- 125 (252)
T ss_pred cCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHH--------
Confidence 355677889999999999999999999999999999999986655544443 55566665555555555554
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 126 -------------------------------------------------------------------------------- 125 (252)
T PRK06077 126 -------------------------------------------------------------------------------- 125 (252)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+.|.|+++++||++||..+... ..+..+|++||++
T Consensus 126 -----~~~~~~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~~ 160 (252)
T PRK06077 126 -----LAKEMREGGAIVNIASVAGIRP----------------------------------------AYGLSIYGAMKAA 160 (252)
T ss_pred -----HHHHhhcCcEEEEEcchhccCC----------------------------------------CCCchHHHHHHHH
Confidence 4454544566667766665431 2234569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.+++++. + +|+++.+.||+|+|++...
T Consensus 161 ~~~~~~~l~~~~~----~-~i~v~~v~Pg~i~t~~~~~ 193 (252)
T PRK06077 161 VINLTKYLALELA----P-KIRVNAIAPGFVKTKLGES 193 (252)
T ss_pred HHHHHHHHHHHHh----c-CCEEEEEeeCCccChHHHh
Confidence 9999988888764 3 7999999999999998643
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.5e-16 Score=139.19 Aligned_cols=143 Identities=24% Similarity=0.420 Sum_probs=107.0
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++..+.||++|+++++++++.+.++++++|++|||||........+.+ +++++.+++|+.+++.+++++.+.+.+
T Consensus 45 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 124 (239)
T TIGR01830 45 AYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIK 124 (239)
T ss_pred hcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 3455678899999999999999999999999999999999987654433333 666667766666666666655554422
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 125 -------------------------------------------------------------------------------- 124 (239)
T TIGR01830 125 -------------------------------------------------------------------------------- 124 (239)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.+.++++++||..+... ..+...|+.+|+
T Consensus 125 -----------~~~~~~v~~sS~~~~~g----------------------------------------~~~~~~y~~~k~ 153 (239)
T TIGR01830 125 -----------QRSGRIINISSVVGLMG----------------------------------------NAGQANYAASKA 153 (239)
T ss_pred -----------cCCeEEEEECCccccCC----------------------------------------CCCCchhHHHHH
Confidence 11357777777665441 223356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.+++++... |++++.++||+++|++...
T Consensus 154 a~~~~~~~l~~~~~~~----g~~~~~i~pg~~~~~~~~~ 188 (239)
T TIGR01830 154 GVIGFTKSLAKELASR----NITVNAVAPGFIDTDMTDK 188 (239)
T ss_pred HHHHHHHHHHHHHhhc----CeEEEEEEECCCCChhhhh
Confidence 9999998888877654 9999999999999987644
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.3e-16 Score=138.64 Aligned_cols=142 Identities=27% Similarity=0.411 Sum_probs=107.6
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++..+.+|+++.+++.++++.+.+.++++|++|||||........+.+ +.+++.+++|+.+++.+.+++.+.+.+.
T Consensus 53 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 132 (248)
T PRK05557 53 LGGKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQ 132 (248)
T ss_pred cCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 456778889999999999999999999999999999999987765444443 6677777666666666666665554321
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 133 -------------------------------------------------------------------------------- 132 (248)
T PRK05557 133 -------------------------------------------------------------------------------- 132 (248)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+.++++++||..+... ..+...|+++|++
T Consensus 133 -----------~~~~~v~iss~~~~~~----------------------------------------~~~~~~y~~sk~a 161 (248)
T PRK05557 133 -----------RSGRIINISSVVGLMG----------------------------------------NPGQANYAASKAG 161 (248)
T ss_pred -----------CCeEEEEEcccccCcC----------------------------------------CCCCchhHHHHHH
Confidence 1256777777655431 1223469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.++.++... ||++++++||+++|++.+.
T Consensus 162 ~~~~~~~~a~~~~~~----~i~~~~v~pg~~~~~~~~~ 195 (248)
T PRK05557 162 VIGFTKSLARELASR----GITVNAVAPGFIETDMTDA 195 (248)
T ss_pred HHHHHHHHHHHhhhh----CeEEEEEecCccCCccccc
Confidence 999998888887655 9999999999999988654
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.2e-16 Score=134.14 Aligned_cols=87 Identities=29% Similarity=0.542 Sum_probs=71.3
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+..+.++.+++||+++.++++++++.+.+.++++|+||||||+.....+.+++ ++|++++++|+.+++.+.|++.| +
T Consensus 48 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~ 125 (167)
T PF00106_consen 48 KAPGAKITFIECDLSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--Q 125 (167)
T ss_dssp HHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--H
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee--c
Confidence 44568899999999999999999999999999999999999999877777776 88888888888888887777776 3
Q ss_pred CCceEEEEec
Q psy2266 84 PHARVVNVAS 93 (313)
Q Consensus 84 ~~g~IV~isS 93 (313)
+++.||+++|
T Consensus 126 ~~g~iv~~sS 135 (167)
T PF00106_consen 126 GGGKIVNISS 135 (167)
T ss_dssp TTEEEEEEEE
T ss_pred cccceEEecc
Confidence 3444444443
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.1e-16 Score=162.67 Aligned_cols=76 Identities=22% Similarity=0.294 Sum_probs=62.9
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.++..++||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|+..+++|+.+++.+++++++.|++
T Consensus 465 ~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~ 541 (676)
T TIGR02632 465 GRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMRE 541 (676)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3577889999999999999999999999999999999987655555555 788888888888887777777776643
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.9e-16 Score=141.14 Aligned_cols=91 Identities=16% Similarity=0.054 Sum_probs=67.2
Q ss_pred hhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCC
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAG 233 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (313)
+..+++|+.|++.+++.+.|.|+++++||++||..+.... . ....
T Consensus 103 ~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~-~----------------------------------~~~~ 147 (248)
T PRK07806 103 DYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIP-T----------------------------------VKTM 147 (248)
T ss_pred ceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCc-c----------------------------------ccCC
Confidence 3456788888888888888888767889999886542100 0 0011
Q ss_pred CCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 234 WPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 234 ~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+....|+.||+++..+++.++.+++.. ||+||+|.||++.|++...
T Consensus 148 ~~~~~Y~~sK~a~e~~~~~l~~~~~~~----~i~v~~v~pg~~~~~~~~~ 193 (248)
T PRK07806 148 PEYEPVARSKRAGEDALRALRPELAEK----GIGFVVVSGDMIEGTVTAT 193 (248)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhhcc----CeEEEEeCCccccCchhhh
Confidence 223469999999999998888887765 9999999999999987543
|
|
| >KOG1204|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-16 Score=142.61 Aligned_cols=139 Identities=20% Similarity=0.232 Sum_probs=101.7
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC--CC-CChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT--AP-GSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~--~~-~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
.|.....+..|++.+.-...+++..++++|..|++|||||...+. .+ +..+ ++|++-+
T Consensus 52 ~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~------------------ 113 (253)
T KOG1204|consen 52 YGDDFVHVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYW------------------ 113 (253)
T ss_pred ecCCcceechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHH------------------
Confidence 343444456777877778889999999999999999999998754 11 1222 4555555
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
+.|++
T Consensus 114 ---------------------------------------------------------------------------~~Nlf 118 (253)
T KOG1204|consen 114 ---------------------------------------------------------------------------DLNLF 118 (253)
T ss_pred ---------------------------------------------------------------------------Hhhhh
Confidence 55555
Q ss_pred cHHHHHHHHhhcccCC---CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCch
Q psy2266 163 ALVTVCHILFPLLRPH---ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSY 239 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~---g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 239 (313)
+.+.+.+.++|.+++. +.+|||||.++.. +..++.+|
T Consensus 119 S~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~----------------------------------------p~~~wa~y 158 (253)
T KOG1204|consen 119 SMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR----------------------------------------PFSSWAAY 158 (253)
T ss_pred hHHhhHHHHHHHhcCCCccCeEEEecchhhhc----------------------------------------cccHHHHh
Confidence 5555555566666554 7889999988876 23445679
Q ss_pred hhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 240 SVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 240 ~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+++|+|.++|.+.+|.|-- .+++|.++.||.|+|+|+..
T Consensus 159 c~~KaAr~m~f~~lA~EEp-----~~v~vl~~aPGvvDT~mq~~ 197 (253)
T KOG1204|consen 159 CSSKAARNMYFMVLASEEP-----FDVRVLNYAPGVVDTQMQVC 197 (253)
T ss_pred hhhHHHHHHHHHHHhhcCc-----cceeEEEccCCcccchhHHH
Confidence 9999999999977776632 38999999999999999765
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.8e-16 Score=139.39 Aligned_cols=140 Identities=24% Similarity=0.295 Sum_probs=100.5
Q ss_pred CceeEEEeecC--CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 9 NNVRFHQLDIL--DQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 9 ~~~~~~~~Dvs--~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.++..+.+|++ +++++.++++.+.+.++++|+||||||..... ++.+.+ +.|++.+++|+.+++.+++++.+.|++
T Consensus 62 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~ 141 (247)
T PRK08945 62 PQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLK 141 (247)
T ss_pred CCceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh
Confidence 35667788886 78899999999999999999999999986543 333333 556666655555555555555544432
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 142 -------------------------------------------------------------------------------- 141 (247)
T PRK08945 142 -------------------------------------------------------------------------------- 141 (247)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.+.++|+++||..+... .....+|++||+
T Consensus 142 -----------~~~~~iv~~ss~~~~~~----------------------------------------~~~~~~Y~~sK~ 170 (247)
T PRK08945 142 -----------SPAASLVFTSSSVGRQG----------------------------------------RANWGAYAVSKF 170 (247)
T ss_pred -----------CCCCEEEEEccHhhcCC----------------------------------------CCCCcccHHHHH
Confidence 11356777777665431 123346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.+++++... ||++++|+||++.|++...
T Consensus 171 a~~~~~~~~~~~~~~~----~i~~~~v~pg~v~t~~~~~ 205 (247)
T PRK08945 171 ATEGMMQVLADEYQGT----NLRVNCINPGGTRTAMRAS 205 (247)
T ss_pred HHHHHHHHHHHHhccc----CEEEEEEecCCccCcchhh
Confidence 9999998888877654 9999999999999997543
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1e-15 Score=138.92 Aligned_cols=136 Identities=24% Similarity=0.268 Sum_probs=101.8
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
..+.++.++++|++|.+++.++++ +++|+||||||+....+..+.+ +.|+..+++|+.+++.+++.+.+.|++
T Consensus 48 ~~~~~~~~~~~D~~~~~~~~~~~~------~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 121 (257)
T PRK09291 48 RRGLALRVEKLDLTDAIDRAQAAE------WDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVA 121 (257)
T ss_pred hcCCcceEEEeeCCCHHHHHHHhc------CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 345568889999999988776543 4899999999998766666655 778888877777777777766665543
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 122 ~------------------------------------------------------------------------------- 122 (257)
T PRK09291 122 R------------------------------------------------------------------------------- 122 (257)
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+.++||++||..+... ..+...|++||+
T Consensus 123 ------------~~~~iv~~SS~~~~~~----------------------------------------~~~~~~Y~~sK~ 150 (257)
T PRK09291 123 ------------GKGKVVFTSSMAGLIT----------------------------------------GPFTGAYCASKH 150 (257)
T ss_pred ------------CCceEEEEcChhhccC----------------------------------------CCCcchhHHHHH
Confidence 1256777777665431 123346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
++..+++.++.++.+. ||++++|+||++.|++..
T Consensus 151 a~~~~~~~l~~~~~~~----gi~~~~v~pg~~~t~~~~ 184 (257)
T PRK09291 151 ALEAIAEAMHAELKPF----GIQVATVNPGPYLTGFND 184 (257)
T ss_pred HHHHHHHHHHHHHHhc----CcEEEEEecCcccccchh
Confidence 9999998888887655 999999999999998754
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.3e-16 Score=137.59 Aligned_cols=164 Identities=16% Similarity=0.125 Sum_probs=125.0
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC----CCCChh-HHHHHHHhHHHHHHHHHHHHH
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT----APGSFG-QRAETTLATNFFALVTVCHIL 78 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~----~~~~~~-~~~~~~~~vNl~~~i~l~ra~ 78 (313)
++++|. ...++|||+++++++++|+.+.+++|+||+|||+-|+.+.. .+.+++ +.|...+++-.++...+.|++
T Consensus 52 a~~~~s-~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a 130 (259)
T COG0623 52 AEELGS-DLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAA 130 (259)
T ss_pred HhhccC-CeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHH
Confidence 344443 56789999999999999999999999999999999998733 555566 999999988888888888888
Q ss_pred HhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhh
Q psy2266 79 FPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLA 158 (313)
Q Consensus 79 ~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~ 158 (313)
.|+|.++|+||.++=
T Consensus 131 ~~lM~~ggSiltLtY----------------------------------------------------------------- 145 (259)
T COG0623 131 RPLMNNGGSILTLTY----------------------------------------------------------------- 145 (259)
T ss_pred HHhcCCCCcEEEEEe-----------------------------------------------------------------
Confidence 887777777765542
Q ss_pred cccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCc
Q psy2266 159 TNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFS 238 (313)
Q Consensus 159 ~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
..+.+.. |. ++ .
T Consensus 146 ----------------------------lgs~r~v-Pn------------------------------------YN---v 157 (259)
T COG0623 146 ----------------------------LGSERVV-PN------------------------------------YN---V 157 (259)
T ss_pred ----------------------------ccceeec-CC------------------------------------Cc---h
Confidence 2222211 00 11 2
Q ss_pred hhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 239 Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
.+++|++|+.-+|+||.++.++ |||||.|+-|+|+|--...... .....+......|++|.-+
T Consensus 158 MGvAKAaLEasvRyLA~dlG~~----gIRVNaISAGPIrTLAasgI~~-f~~~l~~~e~~aPl~r~vt 220 (259)
T COG0623 158 MGVAKAALEASVRYLAADLGKE----GIRVNAISAGPIRTLAASGIGD-FRKMLKENEANAPLRRNVT 220 (259)
T ss_pred hHHHHHHHHHHHHHHHHHhCcc----CeEEeeecccchHHHHhhcccc-HHHHHHHHHhhCCccCCCC
Confidence 5799999999999999999988 9999999999999976655422 2344566677788888654
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.6e-15 Score=134.64 Aligned_cols=139 Identities=24% Similarity=0.324 Sum_probs=105.4
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.++.++++|+++.+++.++++.+.+.++++|++|||||......+.+.. +++++.+++|+.+++.+++++.+.|+.
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--- 130 (237)
T PRK07326 54 GNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR--- 130 (237)
T ss_pred CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH---
Confidence 4578899999999999999999999999999999999987655555444 667777766666666666666555421
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 131 -------------------------------------------------------------------------------- 130 (237)
T PRK07326 131 -------------------------------------------------------------------------------- 130 (237)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
..++||++||..+... ..+...|+.+|+++.
T Consensus 131 ---------~~~~iv~~ss~~~~~~----------------------------------------~~~~~~y~~sk~a~~ 161 (237)
T PRK07326 131 ---------GGGYIINISSLAGTNF----------------------------------------FAGGAAYNASKFGLV 161 (237)
T ss_pred ---------CCeEEEEECChhhccC----------------------------------------CCCCchHHHHHHHHH
Confidence 1255666666554321 122346999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.+++.++.+++.. |+++++|.||++.|++...
T Consensus 162 ~~~~~~~~~~~~~----gi~v~~v~pg~~~t~~~~~ 193 (237)
T PRK07326 162 GFSEAAMLDLRQY----GIKVSTIMPGSVATHFNGH 193 (237)
T ss_pred HHHHHHHHHhccc----CcEEEEEeeccccCccccc
Confidence 9998888887654 9999999999999997654
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.4e-15 Score=135.33 Aligned_cols=134 Identities=22% Similarity=0.220 Sum_probs=99.2
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
+.++.+|+++.++++++++. ++++|++|||||........+.+ ++|++.+++|+.+++.+++++.+.+++.+
T Consensus 55 ~~~~~~D~~~~~~v~~~~~~----~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--- 127 (245)
T PRK07060 55 CEPLRLDVGDDAAIRAALAA----AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAG--- 127 (245)
T ss_pred CeEEEecCCCHHHHHHHHHH----hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---
Confidence 56788999999888776654 68899999999997655444444 77777777777777777777666553210
Q ss_pred EEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHH
Q psy2266 90 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCH 169 (313)
Q Consensus 90 ~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 169 (313)
T Consensus 128 -------------------------------------------------------------------------------- 127 (245)
T PRK07060 128 -------------------------------------------------------------------------------- 127 (245)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHH
Q psy2266 170 ILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKL 249 (313)
Q Consensus 170 ~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l 249 (313)
..++||++||..+... ..+...|+.+|+++..+
T Consensus 128 -------~~~~iv~~sS~~~~~~----------------------------------------~~~~~~y~~sK~a~~~~ 160 (245)
T PRK07060 128 -------RGGSIVNVSSQAALVG----------------------------------------LPDHLAYCASKAALDAI 160 (245)
T ss_pred -------CCcEEEEEccHHHcCC----------------------------------------CCCCcHhHHHHHHHHHH
Confidence 0156777776665431 12335699999999999
Q ss_pred HHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 250 SFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 250 ~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
++.++.++.+. ||++++|+||++.|++..
T Consensus 161 ~~~~a~~~~~~----~i~v~~v~pg~v~~~~~~ 189 (245)
T PRK07060 161 TRVLCVELGPH----GIRVNSVNPTVTLTPMAA 189 (245)
T ss_pred HHHHHHHHhhh----CeEEEEEeeCCCCCchhh
Confidence 99888887655 999999999999999854
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.5e-15 Score=133.68 Aligned_cols=142 Identities=25% Similarity=0.371 Sum_probs=109.4
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.++.||+++.+++.++++.+.+.++.+|++|||||......+.+.+ ++|+..+++|+.+++.+++.+.+.+++.
T Consensus 54 ~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (249)
T PRK12825 54 LGRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ 133 (249)
T ss_pred cCCceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 455688899999999999999999988899999999999987655554444 7777777777777777777766655431
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 134 -------------------------------------------------------------------------------- 133 (249)
T PRK12825 134 -------------------------------------------------------------------------------- 133 (249)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+.++++++||..+... ..+...|+.+|++
T Consensus 134 -----------~~~~~i~~SS~~~~~~----------------------------------------~~~~~~y~~sK~~ 162 (249)
T PRK12825 134 -----------RGGRIVNISSVAGLPG----------------------------------------WPGRSNYAAAKAG 162 (249)
T ss_pred -----------CCCEEEEECccccCCC----------------------------------------CCCchHHHHHHHH
Confidence 1256677776665431 1223459999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.++.++.+. ||+++.++||++.|++...
T Consensus 163 ~~~~~~~~~~~~~~~----~i~~~~i~pg~~~~~~~~~ 196 (249)
T PRK12825 163 LVGLTKALARELAEY----GITVNMVAPGDIDTDMKEA 196 (249)
T ss_pred HHHHHHHHHHHHhhc----CeEEEEEEECCccCCcccc
Confidence 999998888887655 9999999999999998654
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.6e-15 Score=134.33 Aligned_cols=143 Identities=25% Similarity=0.320 Sum_probs=109.9
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.++.||++|.++++++++.+.++++++|++|||||.....++.+.. ++|+..+++|+.+++.+++++.+.|++
T Consensus 52 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 131 (251)
T PRK12826 52 AAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIR 131 (251)
T ss_pred hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3455688899999999999999999999999999999999988766555444 777777877777777777777666533
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 132 ~------------------------------------------------------------------------------- 132 (251)
T PRK12826 132 A------------------------------------------------------------------------------- 132 (251)
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccc-cccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+.++++++||..+. . ...+...|+.+|
T Consensus 133 ------------~~~~ii~~ss~~~~~~----------------------------------------~~~~~~~y~~sK 160 (251)
T PRK12826 133 ------------GGGRIVLTSSVAGPRV----------------------------------------GYPGLAHYAASK 160 (251)
T ss_pred ------------CCcEEEEEechHhhcc----------------------------------------CCCCccHHHHHH
Confidence 12556666665553 1 112234699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+++..+++.++.++... ||+++.|.||++.|+..+.
T Consensus 161 ~a~~~~~~~~~~~~~~~----~i~~~~i~pg~~~~~~~~~ 196 (251)
T PRK12826 161 AGLVGFTRALALELAAR----NITVNSVHPGGVDTPMAGN 196 (251)
T ss_pred HHHHHHHHHHHHHHHHc----CeEEEEEeeCCCCcchhhh
Confidence 99999999988887765 9999999999999997544
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.2e-15 Score=132.16 Aligned_cols=81 Identities=22% Similarity=0.317 Sum_probs=60.3
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC-Cc
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD--TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP-HA 86 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~--~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~-~g 86 (313)
+.++.+|+++.++++++++.+.. +++|++|||||.... ....+.+ ++|++.+++|+.+++.+++++.+.|++ ++
T Consensus 46 ~~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g 123 (222)
T PRK06953 46 AEALALDVADPASVAGLAWKLDG--EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGG 123 (222)
T ss_pred ceEEEecCCCHHHHHHHHHHhcC--CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCC
Confidence 45789999999999998776542 579999999998732 3444444 999999999998888888887776643 33
Q ss_pred eEEEEec
Q psy2266 87 RVVNVAS 93 (313)
Q Consensus 87 ~IV~isS 93 (313)
++|+++|
T Consensus 124 ~iv~isS 130 (222)
T PRK06953 124 VLAVLSS 130 (222)
T ss_pred eEEEEcC
Confidence 4444443
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-15 Score=138.29 Aligned_cols=171 Identities=13% Similarity=0.089 Sum_probs=114.5
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc-chhh
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF-GQRA 153 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~-~~~~ 153 (313)
++++..+ ++|.+++.+++......+...........+|..+.++++ +.+|++|+||||||....+.. .++|
T Consensus 28 ~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~-------~~~~~iDilVnnAG~~~~~~~~~~~~ 100 (245)
T PRK12367 28 KALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLD-------KQLASLDVLILNHGINPGGRQDPENI 100 (245)
T ss_pred HHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHH-------HhcCCCCEEEECCccCCcCCCCHHHH
Confidence 3444333 557788877665411111101111123455777777654 357899999999998654444 4789
Q ss_pred hhhhhcccccHHHHHHHHhhcccC----CCc-eEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcc
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRP----HAR-VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGK 228 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~----~g~-iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (313)
+.++++|+.|++.++++++|.|++ +|+ +++.+|.++..
T Consensus 101 ~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~------------------------------------- 143 (245)
T PRK12367 101 NKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ------------------------------------- 143 (245)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC-------------------------------------
Confidence 999999999999999999999954 243 44445554432
Q ss_pred cccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhh
Q psy2266 229 DKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQ 296 (313)
Q Consensus 229 ~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 296 (313)
.....+|++||+|+..+. .++++++.++.+.||+|++++||+++|++... ...++++.+...
T Consensus 144 ----~~~~~~Y~aSKaal~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~~-~~~~~~~vA~~i 205 (245)
T PRK12367 144 ----PALSPSYEISKRLIGQLV-SLKKNLLDKNERKKLIIRKLILGPFRSELNPI-GIMSADFVAKQI 205 (245)
T ss_pred ----CCCCchhHHHHHHHHHHH-HHHHHHHHhhcccccEEEEecCCCcccccCcc-CCCCHHHHHHHH
Confidence 112346999999997765 77787777667779999999999999998543 234566665543
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=9e-15 Score=131.56 Aligned_cols=74 Identities=28% Similarity=0.330 Sum_probs=57.4
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
..+.++.+|++|.++++++++.+.++++++|++|||||.....+..+.+ ++|+..+++|+.+++.+.+++.+.+
T Consensus 57 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~ 131 (249)
T PRK09135 57 GSAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQL 131 (249)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHH
Confidence 4578899999999999999999999999999999999987655444443 5666666666666666666655544
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.7e-15 Score=154.11 Aligned_cols=139 Identities=20% Similarity=0.211 Sum_probs=108.6
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.++.||++|++++.++++.+.+.+|++|++|||||+....++.+.+ ++|+..+++|+.+++.+++++.+.|++.+
T Consensus 471 ~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-- 548 (681)
T PRK08324 471 RALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG-- 548 (681)
T ss_pred cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--
Confidence 678899999999999999999999999999999999998766666555 77777777777777777776666654410
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 549 -------------------------------------------------------------------------------- 548 (681)
T PRK08324 549 -------------------------------------------------------------------------------- 548 (681)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
.+|+||++||..+.. +..+..+|++||+++..
T Consensus 549 --------~~g~iV~vsS~~~~~----------------------------------------~~~~~~~Y~asKaa~~~ 580 (681)
T PRK08324 549 --------LGGSIVFIASKNAVN----------------------------------------PGPNFGAYGAAKAAELH 580 (681)
T ss_pred --------CCcEEEEECCccccC----------------------------------------CCCCcHHHHHHHHHHHH
Confidence 025666666665543 12234569999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeeccccc--cccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYV--NTDLTE 282 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v--~T~~~~ 282 (313)
+++.++.++... ||+||.|+||+| .|++..
T Consensus 581 l~~~la~e~~~~----gIrvn~v~Pg~v~~~t~~~~ 612 (681)
T PRK08324 581 LVRQLALELGPD----GIRVNGVNPDAVVRGSGIWT 612 (681)
T ss_pred HHHHHHHHhccc----CeEEEEEeCceeecCCcccc
Confidence 998888887755 999999999999 888643
|
|
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.8e-15 Score=137.30 Aligned_cols=139 Identities=22% Similarity=0.276 Sum_probs=112.5
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
+.+..+|+.|-+++..+++.+...+|.+|.|++|||..-.+.+.+.+ ++++..+++|+.+++.+++++++.|++.
T Consensus 86 v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~---- 161 (331)
T KOG1210|consen 86 VSYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKR---- 161 (331)
T ss_pred eeEeccccccHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhcc----
Confidence 66788999999999999999999999999999999999888777776 7777777777777766666666666551
Q ss_pred EEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHH
Q psy2266 90 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCH 169 (313)
Q Consensus 90 ~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 169 (313)
T Consensus 162 -------------------------------------------------------------------------------- 161 (331)
T KOG1210|consen 162 -------------------------------------------------------------------------------- 161 (331)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHH
Q psy2266 170 ILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKL 249 (313)
Q Consensus 170 ~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l 249 (313)
+..|+|+.+||.+++. +-.+..+|+++|+|+-+|
T Consensus 162 ------~~~g~I~~vsS~~a~~----------------------------------------~i~GysaYs~sK~alrgL 195 (331)
T KOG1210|consen 162 ------EHLGRIILVSSQLAML----------------------------------------GIYGYSAYSPSKFALRGL 195 (331)
T ss_pred ------ccCcEEEEehhhhhhc----------------------------------------CcccccccccHHHHHHHH
Confidence 1125788888888776 234556799999999999
Q ss_pred HHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 250 SFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 250 ~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
...++.|+.+. ||+|....|+.++||-.+.
T Consensus 196 a~~l~qE~i~~----~v~Vt~~~P~~~~tpGfE~ 225 (331)
T KOG1210|consen 196 AEALRQELIKY----GVHVTLYYPPDTLTPGFER 225 (331)
T ss_pred HHHHHHHHhhc----ceEEEEEcCCCCCCCcccc
Confidence 97777777765 9999999999999996554
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.8e-14 Score=129.50 Aligned_cols=138 Identities=27% Similarity=0.289 Sum_probs=102.8
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCC-CCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI-YRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi-~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++.++.+|++|.++++++++. ++++|++|||||. .....+.+.+ ++|+..+++|+.+++.+++++.+.|++
T Consensus 47 ~~~~~~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 122 (238)
T PRK08264 47 LGPRVVPLQLDVTDPASVAAAAEA----ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAA 122 (238)
T ss_pred cCCceEEEEecCCCHHHHHHHHHh----cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 345688899999999998876653 5789999999998 4444454444 788888877777777777776665543
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 123 -------------------------------------------------------------------------------- 122 (238)
T PRK08264 123 -------------------------------------------------------------------------------- 122 (238)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.+.++++++||..+... ..+...|+.+|+
T Consensus 123 -----------~~~~~~v~~sS~~~~~~----------------------------------------~~~~~~y~~sK~ 151 (238)
T PRK08264 123 -----------NGGGAIVNVLSVLSWVN----------------------------------------FPNLGTYSASKA 151 (238)
T ss_pred -----------cCCCEEEEEcChhhccC----------------------------------------CCCchHhHHHHH
Confidence 11256666666655331 122346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.++.++.+. ||+++++.||.++|++...
T Consensus 152 a~~~~~~~l~~~~~~~----~i~~~~v~pg~v~t~~~~~ 186 (238)
T PRK08264 152 AAWSLTQALRAELAPQ----GTRVLGVHPGPIDTDMAAG 186 (238)
T ss_pred HHHHHHHHHHHHhhhc----CeEEEEEeCCccccccccc
Confidence 9999998888887655 9999999999999998654
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.2e-14 Score=131.38 Aligned_cols=140 Identities=25% Similarity=0.394 Sum_probs=103.7
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++..+++|++|.++++++++.+.+.++++|++|||||........+.+ +++++++++|+.+++.+++++.+.|++.
T Consensus 48 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 127 (255)
T TIGR01963 48 AGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ 127 (255)
T ss_pred cCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 355688899999999999999999999999999999999987544333333 5666666666666666666555554321
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 128 -------------------------------------------------------------------------------- 127 (255)
T TIGR01963 128 -------------------------------------------------------------------------------- 127 (255)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+.+++|++||..+... ......|+.+|++
T Consensus 128 -----------~~~~~v~~ss~~~~~~----------------------------------------~~~~~~y~~sk~a 156 (255)
T TIGR01963 128 -----------GWGRIINIASAHGLVA----------------------------------------SPFKSAYVAAKHG 156 (255)
T ss_pred -----------CCeEEEEEcchhhcCC----------------------------------------CCCCchhHHHHHH
Confidence 1256777777655431 1223469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
+..+++.++.++... ||+++.++||++.|++.
T Consensus 157 ~~~~~~~~~~~~~~~----~i~v~~i~pg~v~~~~~ 188 (255)
T TIGR01963 157 LIGLTKVLALEVAAH----GITVNAICPGYVRTPLV 188 (255)
T ss_pred HHHHHHHHHHHhhhc----CeEEEEEecCccccHHH
Confidence 999999888877654 99999999999999874
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.1e-14 Score=130.57 Aligned_cols=73 Identities=32% Similarity=0.435 Sum_probs=56.9
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCC-CCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIY-RDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~-~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
++..+.+|++|++++.++++.+.+.++++|++|||||.. ........+ ++|++++++|+.+++.+++++.+.|
T Consensus 59 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 133 (264)
T PRK12829 59 KVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLL 133 (264)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 457889999999999999999999999999999999987 333344443 6777777777777766666665544
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.6e-14 Score=129.63 Aligned_cols=138 Identities=26% Similarity=0.347 Sum_probs=103.6
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHc-CCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQH-GGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~-g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
+..++||++|.+++..+++.+.+.. +++|++|||||.....+..+.+ +++++.+++|+.+++.+++.+++.|++.
T Consensus 47 ~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--- 123 (256)
T PRK08017 47 FTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH--- 123 (256)
T ss_pred CeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc---
Confidence 5778999999999999999887654 7899999999986655554444 6777777777777777766666655431
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 124 -------------------------------------------------------------------------------- 123 (256)
T PRK08017 124 -------------------------------------------------------------------------------- 123 (256)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
+.++|+++||..+... ..+...|++||+++..
T Consensus 124 --------~~~~iv~~ss~~~~~~----------------------------------------~~~~~~Y~~sK~~~~~ 155 (256)
T PRK08017 124 --------GEGRIVMTSSVMGLIS----------------------------------------TPGRGAYAASKYALEA 155 (256)
T ss_pred --------CCCEEEEEcCcccccC----------------------------------------CCCccHHHHHHHHHHH
Confidence 1256666666655431 1223459999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+++.++.++... ||++++|.||++.|++...
T Consensus 156 ~~~~l~~~~~~~----~i~v~~v~pg~~~t~~~~~ 186 (256)
T PRK08017 156 WSDALRMELRHS----GIKVSLIEPGPIRTRFTDN 186 (256)
T ss_pred HHHHHHHHHhhc----CCEEEEEeCCCcccchhhc
Confidence 998888877655 9999999999999987653
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.4e-14 Score=128.18 Aligned_cols=78 Identities=24% Similarity=0.390 Sum_probs=61.3
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
..+.+..++.||++|.+++.++++.+.+.++++|++|||||.....+..+.+ ++|+..++.|+.+++.+++++.+.|.
T Consensus 51 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 129 (246)
T PRK05653 51 AAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMI 129 (246)
T ss_pred hcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3466788899999999999999999988899999999999987665444444 67777777777777777666666553
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=3e-14 Score=127.80 Aligned_cols=83 Identities=18% Similarity=0.231 Sum_probs=64.3
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
+++.++||+++.++++++++.+.+.++++|.+|+|+|........+. ++++.++++|+.+++.+.+.+.|.|++++++|
T Consensus 54 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv 132 (238)
T PRK05786 54 NIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEF-SGLEEMLTNHIKIPLYAVNASLRFLKEGSSIV 132 (238)
T ss_pred CeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHH-HHHHHHHHHhchHHHHHHHHHHHHHhcCCEEE
Confidence 57889999999999999999998889999999999997654433333 78888888888887777777776665544555
Q ss_pred EEec
Q psy2266 90 NVAS 93 (313)
Q Consensus 90 ~isS 93 (313)
+++|
T Consensus 133 ~~ss 136 (238)
T PRK05786 133 LVSS 136 (238)
T ss_pred EEec
Confidence 4444
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.2e-14 Score=128.02 Aligned_cols=138 Identities=25% Similarity=0.319 Sum_probs=102.2
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
+..+.+|++|.++++++++.+.+.+|++|++|||||..........+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 56 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----- 130 (239)
T PRK12828 56 LRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTA----- 130 (239)
T ss_pred ceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHh-----
Confidence 56678999999999999999999999999999999987644433333 666666666666666666655554432
Q ss_pred EEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHH
Q psy2266 90 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCH 169 (313)
Q Consensus 90 ~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 169 (313)
T Consensus 131 -------------------------------------------------------------------------------- 130 (239)
T PRK12828 131 -------------------------------------------------------------------------------- 130 (239)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHH
Q psy2266 170 ILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKL 249 (313)
Q Consensus 170 ~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l 249 (313)
.+.++|+++||..+... ..+...|+++|+++..+
T Consensus 131 ------~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~y~~sk~a~~~~ 164 (239)
T PRK12828 131 ------SGGGRIVNIGAGAALKA----------------------------------------GPGMGAYAAAKAGVARL 164 (239)
T ss_pred ------cCCCEEEEECchHhccC----------------------------------------CCCcchhHHHHHHHHHH
Confidence 11256777777665431 22335699999999999
Q ss_pred HHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 250 SFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 250 ~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++.++.++.+. ||+++.|.||++.|++...
T Consensus 165 ~~~~a~~~~~~----~i~~~~i~pg~v~~~~~~~ 194 (239)
T PRK12828 165 TEALAAELLDR----GITVNAVLPSIIDTPPNRA 194 (239)
T ss_pred HHHHHHHhhhc----CeEEEEEecCcccCcchhh
Confidence 98888877654 9999999999999987543
|
|
| >KOG1014|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=6e-15 Score=137.15 Aligned_cols=88 Identities=22% Similarity=0.274 Sum_probs=70.2
Q ss_pred hhhhhhcccccHHHHHHHHhhcc--cCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccc
Q psy2266 153 AETTLATNFFALVTVCHILFPLL--RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDK 230 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l--~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (313)
+.+.+.+|..+...+++.++|.| +++|-|+|+||.++..+.
T Consensus 152 ~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~------------------------------------- 194 (312)
T KOG1014|consen 152 LQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPT------------------------------------- 194 (312)
T ss_pred hhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccC-------------------------------------
Confidence 34555667777777777777766 345899999999998722
Q ss_pred cCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 231 EAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 231 ~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
+....|++||+.+..|+++|++|++.+ ||.|.+|.|..|.|+|+...
T Consensus 195 ---p~~s~ysasK~~v~~~S~~L~~Ey~~~----gI~Vq~v~p~~VaTkm~~~~ 241 (312)
T KOG1014|consen 195 ---PLLSVYSASKAFVDFFSRCLQKEYESK----GIFVQSVIPYLVATKMAKYR 241 (312)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHhc----CeEEEEeehhheeccccccC
Confidence 122459999999999999999999887 99999999999999998753
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.9e-14 Score=160.44 Aligned_cols=75 Identities=12% Similarity=0.166 Sum_probs=63.7
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
++.|.++.++.|||+|.++++++++.+.+. |+||+||||||+.....+.+.+ ++|++++++|+.|++.+++++.+
T Consensus 2090 ~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~ 2165 (2582)
T TIGR02813 2090 KAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNA 2165 (2582)
T ss_pred HhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456888999999999999999999999876 7899999999998877666666 88888888888888777776554
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.3e-13 Score=111.62 Aligned_cols=72 Identities=17% Similarity=0.215 Sum_probs=59.5
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHH
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHIL 78 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~ 78 (313)
.+.++.++.+|++++++++++++.+...++++|++|||||+.........+ ++|++.+++|+.+++.+.+++
T Consensus 51 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 123 (180)
T smart00822 51 LGAEVTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELT 123 (180)
T ss_pred cCCeEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHh
Confidence 456778899999999999999999998899999999999987655555555 778888888888887777765
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.6e-12 Score=114.08 Aligned_cols=71 Identities=27% Similarity=0.353 Sum_probs=53.1
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++++|++|.+++.++++. ++++|++|||||........+.+ ++|.+.+++|+.+++.+++.+.+.|++
T Consensus 48 ~~~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 119 (227)
T PRK08219 48 GATPFPVDLTDPEAIAAAVEQ----LGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA 119 (227)
T ss_pred cceEEecCCCCHHHHHHHHHh----cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 467889999999988887654 46899999999987655544444 777777777777777777766665543
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.8e-11 Score=116.40 Aligned_cols=66 Identities=14% Similarity=0.240 Sum_probs=50.4
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
++..+.+|++|++++.+ .++++|++|||||+.... +...++|++++++|+.+++.+++++.|.|++
T Consensus 225 ~v~~v~~Dvsd~~~v~~-------~l~~IDiLInnAGi~~~~--~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~ 290 (406)
T PRK07424 225 PVKTLHWQVGQEAALAE-------LLEKVDILIINHGINVHG--ERTPEAINKSYEVNTFSAWRLMELFFTTVKT 290 (406)
T ss_pred CeEEEEeeCCCHHHHHH-------HhCCCCEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45678899999887654 346899999999986532 2223788888888888888888888887754
|
|
| >KOG1478|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.1e-10 Score=105.95 Aligned_cols=173 Identities=23% Similarity=0.254 Sum_probs=117.2
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.++..+++|+++-.|+.++...++++|.++|.+..|||+.+...+ +|...+ ++.+ ++ .|
T Consensus 61 i~~~yvlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi-----~w~~av----f~~f--sn----------pv 119 (341)
T KOG1478|consen 61 IEVTYVLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGI-----NWKAAV----FGLF--SN----------PV 119 (341)
T ss_pred eEEEEEEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcc-----cHHHHH----HHHh--hc----------hh
Confidence 457789999999999999999999999999999999999874422 111111 1110 00 00
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEecc-CcCCCCC-cchhhhhhhhcccccHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTA-MDTAPGS-FGQRAETTLATNFFALVT 166 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna-~~~~~~~-~~~~~~~~~~~N~~g~~~ 166 (313)
+ ++.+.+ |....|. ..|+....|++|++|+|.
T Consensus 120 ~----------------------------------------------amt~pt~~~~t~G~is~D~lg~iFetnVFGhfy 153 (341)
T KOG1478|consen 120 I----------------------------------------------AMTSPTEGLLTQGKISADGLGEIFETNVFGHFY 153 (341)
T ss_pred H----------------------------------------------HhcCchhhhhhcceecccchhhHhhhcccchhh
Confidence 0 000111 0011111 136778899999999999
Q ss_pred HHHHHhhcccCC--CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 167 VCHILFPLLRPH--ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 167 ~~~~~~p~l~~~--g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+++.+.|.+..+ ..+|++||..+..-. ++++++ | -.-+..+|+.||.
T Consensus 154 li~~l~pll~~~~~~~lvwtSS~~a~kk~---------lsleD~-------------q---------~~kg~~pY~sSKr 202 (341)
T KOG1478|consen 154 LIRELEPLLCHSDNPQLVWTSSRMARKKN---------LSLEDF-------------Q---------HSKGKEPYSSSKR 202 (341)
T ss_pred hHhhhhhHhhcCCCCeEEEEeeccccccc---------CCHHHH-------------h---------hhcCCCCcchhHH
Confidence 999999999654 589999999885411 111111 0 0123446999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..|. ..+-+++.+-|+-.++++||+.-|.+...
T Consensus 203 l~DlLh----~A~~~~~~~~g~~qyvv~pg~~tt~~~~~ 237 (341)
T KOG1478|consen 203 LTDLLH----VALNRNFKPLGINQYVVQPGIFTTNSFSE 237 (341)
T ss_pred HHHHHH----HHHhccccccchhhhcccCceeecchhhh
Confidence 777776 65666777779999999999988877554
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.4e-10 Score=109.52 Aligned_cols=176 Identities=14% Similarity=0.095 Sum_probs=109.4
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+++.|..+..+.||++++++++++++.+.+++|+||+||||+|..+.... ++-+-|...++ |+-+
T Consensus 98 a~~~G~~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p-~~g~~~~s~lK--------------pi~~ 162 (398)
T PRK13656 98 AKAAGLYAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDP-KTGEVYRSVLK--------------PIGE 162 (398)
T ss_pred HHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCc-ccCceeecccc--------------cccc
Confidence 34557778889999999999999999999999999999999999865421 11122222210 1111
Q ss_pred C-CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc-chhhhhhhhccc
Q psy2266 84 P-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF-GQRAETTLATNF 161 (313)
Q Consensus 84 ~-~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~-~~~~~~~~~~N~ 161 (313)
+ .++.+.++.. . ... ....+. .++++.++ ++
T Consensus 163 ~~~~~~~d~~~~----------~----i~~-------------------------------~s~~~~~~~ei~~Tv--~v 195 (398)
T PRK13656 163 PYTGKTLDTDKD----------V----IIE-------------------------------VTVEPATEEEIADTV--KV 195 (398)
T ss_pred cccCCccccccc----------c----eeE-------------------------------EEEeeCCHHHHHHHH--Hh
Confidence 1 1111111110 0 000 000000 11121111 11
Q ss_pred ccH-----HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCC
Q psy2266 162 FAL-----VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPE 236 (313)
Q Consensus 162 ~g~-----~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
+|. +.=++...|+|.++++++-+|...+.+..+. |+ .
T Consensus 196 Mggedw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~p~-------------------------------------Y~-~ 237 (398)
T PRK13656 196 MGGEDWELWIDALDEAGVLAEGAKTVAYSYIGPELTHPI-------------------------------------YW-D 237 (398)
T ss_pred hccchHHHHHHHHHhcccccCCcEEEEEecCCcceeecc-------------------------------------cC-C
Confidence 221 2224556778888999999999887663211 11 1
Q ss_pred CchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 237 FSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 237 ~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..-+.+|++|..-+|.|+.+|++. |||+|++.+|.+.|.-+..
T Consensus 238 g~mG~AKa~LE~~~r~La~~L~~~----giran~i~~g~~~T~Ass~ 280 (398)
T PRK13656 238 GTIGKAKKDLDRTALALNEKLAAK----GGDAYVSVLKAVVTQASSA 280 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhc----CCEEEEEecCcccchhhhc
Confidence 235899999999999999998876 9999999999999987655
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.1e-10 Score=106.53 Aligned_cols=131 Identities=18% Similarity=0.211 Sum_probs=113.5
Q ss_pred hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC----CCc----chhhhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 109 TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP----GSF----GQRAETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 109 ~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~----~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
.+.+|..|.++++++++.+.+++|++|+||||||.... +++ .++|+++|++|+.|++.+++.++|.|+++|+
T Consensus 59 ~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~ 138 (274)
T PRK08415 59 VYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGAS 138 (274)
T ss_pred EEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCc
Confidence 35678889999999999999999999999999998642 343 3789999999999999999999999988899
Q ss_pred eEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccC
Q psy2266 181 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKD 260 (313)
Q Consensus 181 iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~ 260 (313)
||++||..+..+ .....+|++||+|+.+|+|+++.+++++
T Consensus 139 Iv~isS~~~~~~----------------------------------------~~~~~~Y~asKaal~~l~~~la~el~~~ 178 (274)
T PRK08415 139 VLTLSYLGGVKY----------------------------------------VPHYNVMGVAKAALESSVRYLAVDLGKK 178 (274)
T ss_pred EEEEecCCCccC----------------------------------------CCcchhhhhHHHHHHHHHHHHHHHhhhc
Confidence 999999887541 2233469999999999999999998766
Q ss_pred CCCCCeEEEeecccccccccccc
Q psy2266 261 KRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 261 ~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
||+||+|+||+|+|++...
T Consensus 179 ----gIrVn~v~PG~v~T~~~~~ 197 (274)
T PRK08415 179 ----GIRVNAISAGPIKTLAASG 197 (274)
T ss_pred ----CeEEEEEecCccccHHHhc
Confidence 9999999999999998643
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=3e-10 Score=103.68 Aligned_cols=99 Identities=13% Similarity=0.117 Sum_probs=71.6
Q ss_pred HHHHhcc-cCCceEEEEecccccc---cCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC----C
Q psy2266 76 HILFPLL-RPHARVVNVASKLGML---YNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP----G 147 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~----~ 147 (313)
++++..+ ++|.+|+.+++..... .+... .......+|..++++++++++.+.+++|++|+||||||...+ +
T Consensus 23 ~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~ 101 (252)
T PRK06079 23 WGCAQAIKDQGATVIYTYQNDRMKKSLQKLVD-EEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGG 101 (252)
T ss_pred HHHHHHHHHCCCEEEEecCchHHHHHHHhhcc-CceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccC
Confidence 3444333 5677888776542110 11100 111235678889999999999999999999999999998643 3
Q ss_pred Cc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 148 SF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 148 ~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
++ .++|+.++++|+.|++.+++.++|.|
T Consensus 102 ~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~ 133 (252)
T PRK06079 102 NVTDTSRDGYALAQDISAYSLIAVAKYARPLL 133 (252)
T ss_pred CcccCCHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 33 36899999999999999999999977
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.9e-10 Score=105.22 Aligned_cols=68 Identities=12% Similarity=0.129 Sum_probs=60.1
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC----CCc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP----GSF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~----~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
+.+|..+.++++++++.+.+++|++|+||||||.... +++ .++|+.++++|+.|++.++++++|.|++
T Consensus 62 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~ 137 (271)
T PRK06505 62 LPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD 137 (271)
T ss_pred EeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc
Confidence 4678889999999999999999999999999998642 333 3789999999999999999999999974
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=8.4e-10 Score=101.12 Aligned_cols=74 Identities=14% Similarity=0.185 Sum_probs=64.9
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC----CCc----chhhhhhhhcccccHHHHHHHHhhcccCCCce
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP----GSF----GQRAETTLATNFFALVTVCHILFPLLRPHARV 181 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~----~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~i 181 (313)
+.+|..+.++++++++.+.+++|++|+|+||||.... +++ .++|+.++++|+.|++.+++.++|.|+++|+|
T Consensus 65 ~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~I 144 (258)
T PRK07533 65 LPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSL 144 (258)
T ss_pred EecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEE
Confidence 4578889999999999999999999999999998642 232 37899999999999999999999999877888
Q ss_pred EE
Q psy2266 182 VN 183 (313)
Q Consensus 182 v~ 183 (313)
++
T Consensus 145 i~ 146 (258)
T PRK07533 145 LT 146 (258)
T ss_pred EE
Confidence 76
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.7e-09 Score=98.16 Aligned_cols=120 Identities=23% Similarity=0.290 Sum_probs=88.4
Q ss_pred eEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEE
Q psy2266 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNV 91 (313)
Q Consensus 12 ~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~i 91 (313)
.+++||++|.++++++++.+. ++||+||||||+... +.|++++++|+.+++.+++++.|.|+++|+||++
T Consensus 26 ~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~-------~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~i 95 (241)
T PRK12428 26 GFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT-------APVELVARVNFLGLRHLTEALLPRMAPGGAIVNV 95 (241)
T ss_pred HhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC-------CCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEe
Confidence 457899999999999988763 789999999998632 3578999999999999999999999888999999
Q ss_pred ecccccccCCCch-----------hh-------hh--hhcccCCCHHHHHHHHHHHH-HHcCCccEEEecc
Q psy2266 92 ASKLGMLYNVPSQ-----------EL-------RQ--TLFNESLTEDQLLDMMTDYV-QYNGPLDKILDTA 141 (313)
Q Consensus 92 sS~~~~~~~~~~~-----------~~-------~~--~~~~d~~~~~~~~~~~~~~~-~~~G~lD~Linna 141 (313)
||..+........ +. .. ........+.++..+++.+. ..+++-.+.+|+.
T Consensus 96 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v 166 (241)
T PRK12428 96 ASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCV 166 (241)
T ss_pred CcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEe
Confidence 9998864211000 00 00 01123345666777788887 6677666766664
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=7.6e-10 Score=101.59 Aligned_cols=74 Identities=12% Similarity=0.183 Sum_probs=64.8
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC----CCc----chhhhhhhhcccccHHHHHHHHhhcccCCCce
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP----GSF----GQRAETTLATNFFALVTVCHILFPLLRPHARV 181 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~----~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~i 181 (313)
..+|..++++++++++.+.+++|++|+||||||.... +++ .++|+.++++|+.|++.+++.++|.|+++|+|
T Consensus 63 ~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~I 142 (260)
T PRK06603 63 SELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSI 142 (260)
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceE
Confidence 3578889999999999999999999999999997542 233 36899999999999999999999999888888
Q ss_pred EE
Q psy2266 182 VN 183 (313)
Q Consensus 182 v~ 183 (313)
|+
T Consensus 143 v~ 144 (260)
T PRK06603 143 VT 144 (260)
T ss_pred EE
Confidence 85
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=8.7e-10 Score=102.13 Aligned_cols=130 Identities=12% Similarity=0.072 Sum_probs=112.6
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC----CCc----chhhhhhhhcccccHHHHHHHHhhcccCCCce
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP----GSF----GQRAETTLATNFFALVTVCHILFPLLRPHARV 181 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~----~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~i 181 (313)
..+|..++++++++++.+.+.+|++|+||||||.... +++ .++|+.++++|+.|++.+++.++|+|+++|+|
T Consensus 65 ~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~I 144 (272)
T PRK08159 65 GHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSI 144 (272)
T ss_pred EecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceE
Confidence 5678889999999999999999999999999998643 333 36899999999999999999999999888999
Q ss_pred EEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCC
Q psy2266 182 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDK 261 (313)
Q Consensus 182 v~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~ 261 (313)
|++||..+... .+...+|++||+|+..|++.++.+++++
T Consensus 145 v~iss~~~~~~----------------------------------------~p~~~~Y~asKaal~~l~~~la~el~~~- 183 (272)
T PRK08159 145 LTLTYYGAEKV----------------------------------------MPHYNVMGVAKAALEASVKYLAVDLGPK- 183 (272)
T ss_pred EEEeccccccC----------------------------------------CCcchhhhhHHHHHHHHHHHHHHHhccc-
Confidence 99999876541 2233569999999999999999998766
Q ss_pred CCCCeEEEeecccccccccccc
Q psy2266 262 RRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 262 ~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
||+||+|+||+|+|++...
T Consensus 184 ---gIrVn~v~PG~v~T~~~~~ 202 (272)
T PRK08159 184 ---NIRVNAISAGPIKTLAASG 202 (272)
T ss_pred ---CeEEEEeecCCcCCHHHhc
Confidence 9999999999999998643
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.96 E-value=6.9e-10 Score=100.68 Aligned_cols=97 Identities=14% Similarity=0.097 Sum_probs=80.9
Q ss_pred HHHhcc-cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc--
Q psy2266 77 ILFPLL-RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG-- 150 (313)
Q Consensus 77 a~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~-- 150 (313)
+.+..+ ++|..+|.+++....+.++..+.-. .....|+.|.++++++++.+.+.||++|+|+||||.....++.
T Consensus 21 A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~ 100 (246)
T COG4221 21 ATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEA 100 (246)
T ss_pred HHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhC
Confidence 344444 5688999999999888777444321 3346688899999999999999999999999999998777763
Q ss_pred --hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 --QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 --~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++|++|+++|++|.++.+++++|
T Consensus 101 ~~~dw~~Mid~Ni~G~l~~~~avLP 125 (246)
T COG4221 101 DLDDWDRMIDTNVKGLLNGTRAVLP 125 (246)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 89999999999999999999999
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.1e-09 Score=101.71 Aligned_cols=124 Identities=9% Similarity=0.098 Sum_probs=106.6
Q ss_pred CHHHHHHHHHHHHHHcCCccEEEeccCcCC--CCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCcc
Q psy2266 116 TEDQLLDMMTDYVQYNGPLDKILDTAMDTA--PGSF----GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLG 189 (313)
Q Consensus 116 ~~~~~~~~~~~~~~~~G~lD~Linna~~~~--~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~ 189 (313)
+.++++++++.+.++||++|+||||||... .+|+ .++|+.+|++|++|++.+++.++|.|+++|+||++||..+
T Consensus 103 ~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~II~isS~a~ 182 (303)
T PLN02730 103 SNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGASISLTYIAS 182 (303)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechhh
Confidence 456899999999999999999999997532 3454 3799999999999999999999999988899999999988
Q ss_pred ccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCC-CchhhhHHHHHHHHHHHHhhhcc-CCCCCCeE
Q psy2266 190 MLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPE-FSYSVSKLGVAKLSFIQHATLSK-DKRRPDII 267 (313)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~al~~l~~~~~~~l~~-~~~~~gI~ 267 (313)
.... .+. .+|++||+|+..|+|.|+.++++ . |||
T Consensus 183 ~~~~----------------------------------------p~~~~~Y~asKaAl~~l~~~la~El~~~~----gIr 218 (303)
T PLN02730 183 ERII----------------------------------------PGYGGGMSSAKAALESDTRVLAFEAGRKY----KIR 218 (303)
T ss_pred cCCC----------------------------------------CCCchhhHHHHHHHHHHHHHHHHHhCcCC----CeE
Confidence 6521 112 35999999999999999999874 4 999
Q ss_pred EEeecccccccccccc
Q psy2266 268 VNPVHPGYVNTDLTEH 283 (313)
Q Consensus 268 vn~v~PG~v~T~~~~~ 283 (313)
||+|+||+|+|+|.+.
T Consensus 219 Vn~V~PG~v~T~~~~~ 234 (303)
T PLN02730 219 VNTISAGPLGSRAAKA 234 (303)
T ss_pred EEEEeeCCccCchhhc
Confidence 9999999999999765
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.96 E-value=7.4e-10 Score=100.16 Aligned_cols=113 Identities=15% Similarity=0.220 Sum_probs=88.5
Q ss_pred HHHHhcc-cCCceEEEEecccccc----cCCCchhhhhhhcccCCCHHHHHHHHHHHHHHc-CCccEEEeccCcCCC---
Q psy2266 76 HILFPLL-RPHARVVNVASKLGML----YNVPSQELRQTLFNESLTEDQLLDMMTDYVQYN-GPLDKILDTAMDTAP--- 146 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-G~lD~Linna~~~~~--- 146 (313)
++++..+ ++|.+|+.+.+....+ .+...........+|..++++++++++.+.+.+ |++|+||||+|....
T Consensus 10 ~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~ 89 (241)
T PF13561_consen 10 RAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNV 89 (241)
T ss_dssp HHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGT
T ss_pred HHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccC
Confidence 4444444 5678888888777653 111111111125677889999999999999999 999999999998775
Q ss_pred -CCcc----hhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCc
Q psy2266 147 -GSFG----QRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKL 188 (313)
Q Consensus 147 -~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~ 188 (313)
.++. +.|++++++|+++.+.++++++|+|+++|+||++||..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~ 136 (241)
T PF13561_consen 90 EKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIA 136 (241)
T ss_dssp SSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGG
T ss_pred CCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchh
Confidence 5653 68999999999999999999999999999999999875
|
... |
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.2e-09 Score=93.74 Aligned_cols=77 Identities=17% Similarity=0.255 Sum_probs=55.3
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
+++.|.++.+++||++|+++++++++.+.+.+++||.+||+||......+.+++ ++++.++...+.+...|.+++.+
T Consensus 48 l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~ 125 (181)
T PF08659_consen 48 LESAGARVEYVQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN 125 (181)
T ss_dssp HHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhCCCceeeeccCccCHHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc
Confidence 345688999999999999999999999999999999999999998877777776 99999999888888888776544
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=6e-09 Score=93.12 Aligned_cols=126 Identities=22% Similarity=0.246 Sum_probs=97.3
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC--CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC-
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT--APGSFG-QRAETTLATNFFALVTVCHILFPLLRPH- 85 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~--~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~- 85 (313)
++.++.||++|.++++++++.+.+ +++|++|||||+.... +..+.+ ++|++.+++|+.+++.+++++.+.|+++
T Consensus 46 ~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 123 (225)
T PRK08177 46 GVHIEKLDMNDPASLDQLLQRLQG--QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQ 123 (225)
T ss_pred ccceEEcCCCCHHHHHHHHHHhhc--CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcC
Confidence 467789999999999999998853 5899999999997432 344454 8999999999999999999999999775
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEecc
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTA 141 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna 141 (313)
+.+++++|..+.....+..+ ...+...+.++..+++.+...+++..+.+|+.
T Consensus 124 ~~iv~~ss~~g~~~~~~~~~----~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i 175 (225)
T PRK08177 124 GVLAFMSSQLGSVELPDGGE----MPLYKASKAALNSMTRSFVAELGEPTLTVLSM 175 (225)
T ss_pred CEEEEEccCccccccCCCCC----ccchHHHHHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 89999998776543221111 12344567778888888888888777777764
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.3e-09 Score=100.15 Aligned_cols=128 Identities=12% Similarity=0.124 Sum_probs=108.2
Q ss_pred cCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC--CCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecC
Q psy2266 113 ESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA--PGSF----GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVAS 186 (313)
Q Consensus 113 d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~--~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss 186 (313)
++.+.++++++++.+.++||++|+||||||... ..++ .++|+.++++|+.|+++++++++|.|+++|+|++++|
T Consensus 99 ~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss 178 (299)
T PRK06300 99 KDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTY 178 (299)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEee
Confidence 445557799999999999999999999998643 3454 3789999999999999999999999988899999999
Q ss_pred CccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCC-chhhhHHHHHHHHHHHHhhhccCCCCCC
Q psy2266 187 KLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEF-SYSVSKLGVAKLSFIQHATLSKDKRRPD 265 (313)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~al~~l~~~~~~~l~~~~~~~g 265 (313)
..+... ..... .|++||+|+.+|+|+|+.+++++ +|
T Consensus 179 ~~~~~~----------------------------------------~p~~~~~Y~asKaAl~~lt~~la~el~~~---~g 215 (299)
T PRK06300 179 LASMRA----------------------------------------VPGYGGGMSSAKAALESDTKVLAWEAGRR---WG 215 (299)
T ss_pred hhhcCc----------------------------------------CCCccHHHHHHHHHHHHHHHHHHHHhCCC---CC
Confidence 887652 12222 59999999999999999998742 39
Q ss_pred eEEEeecccccccccccc
Q psy2266 266 IIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 266 I~vn~v~PG~v~T~~~~~ 283 (313)
||||+|+||+|+|++...
T Consensus 216 IrVn~V~PG~v~T~~~~~ 233 (299)
T PRK06300 216 IRVNTISAGPLASRAGKA 233 (299)
T ss_pred eEEEEEEeCCccChhhhc
Confidence 999999999999998654
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.8e-09 Score=99.21 Aligned_cols=67 Identities=10% Similarity=0.169 Sum_probs=58.9
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC----Cc-----chhhhhhhhcccccHHHHHHHHhhccc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG----SF-----GQRAETTLATNFFALVTVCHILFPLLR 176 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~----~~-----~~~~~~~~~~N~~g~~~~~~~~~p~l~ 176 (313)
..+|..++++++++++.+.+.+|++|+||||||..... ++ .++|+.++++|+.|++.++++++|+|+
T Consensus 61 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~ 136 (260)
T PRK06997 61 FPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS 136 (260)
T ss_pred eeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 46788899999999999999999999999999986432 22 368999999999999999999999984
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.2e-08 Score=95.14 Aligned_cols=62 Identities=18% Similarity=0.220 Sum_probs=42.2
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
.++.++.+|++|.+++.++++ .+|++|||||..... ..+ ......+++|+.+++.+++++.+
T Consensus 53 ~~~~~v~~Dl~d~~~l~~~~~-------~iD~Vih~Ag~~~~~-~~~--~~~~~~~~~Nv~g~~~ll~aa~~ 114 (324)
T TIGR03589 53 PCLRFFIGDVRDKERLTRALR-------GVDYVVHAAALKQVP-AAE--YNPFECIRTNINGAQNVIDAAID 114 (324)
T ss_pred CcEEEEEccCCCHHHHHHHHh-------cCCEEEECcccCCCc-hhh--cCHHHHHHHHHHHHHHHHHHHHH
Confidence 357788999999988877653 489999999975421 111 11234677777777777776554
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.7e-09 Score=97.55 Aligned_cols=66 Identities=8% Similarity=0.063 Sum_probs=56.6
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC-----c----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS-----F----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~-----~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..++++++++++.+.+.+|++|+||||||.....+ + .++|+.++++|+.|++.+++.+.|+|
T Consensus 61 ~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 135 (262)
T PRK07984 61 LPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML 135 (262)
T ss_pred eecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHh
Confidence 457888999999999999999999999999999754322 2 36889999999999999999998854
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.6e-09 Score=95.77 Aligned_cols=66 Identities=11% Similarity=0.120 Sum_probs=57.8
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC----CCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP----GSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~----~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..++++++++++.+.+++|++|+|+||||.... +++ .++|..++++|+.+.+.+++.++|.|
T Consensus 64 ~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 137 (257)
T PRK08594 64 LPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLM 137 (257)
T ss_pred EecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 4578889999999999999999999999999997532 333 26899999999999999999999977
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.83 E-value=6.3e-09 Score=98.37 Aligned_cols=190 Identities=15% Similarity=0.157 Sum_probs=121.6
Q ss_pred cCC-ceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC-C----cc
Q psy2266 83 RPH-ARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG-S----FG 150 (313)
Q Consensus 83 ~~~-g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~-~----~~ 150 (313)
+++ .+|+.++.......+.. ..+ . ..+.+|..+.++++++++.+.+++|++|+||||||...+. + ..
T Consensus 25 ~~G~~~V~l~~r~~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~ 103 (314)
T TIGR01289 25 ATGEWHVIMACRDFLKAEQAA-KSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTA 103 (314)
T ss_pred HcCCCEEEEEeCCHHHHHHHH-HHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCH
Confidence 346 67777765443222111 111 1 1235688899999999999999999999999999985432 2 24
Q ss_pred hhhhhhhhcccccHHHHHHHHhhcccCC----CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhh
Q psy2266 151 QRAETTLATNFFALVTVCHILFPLLRPH----ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKE 226 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p~l~~~----g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (313)
++|+.++++|+.|++.+++.++|.|++. |+||++||..+......+. +........+. ....+ ......
T Consensus 104 ~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~-~~~~~~ 176 (314)
T TIGR01289 104 DGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGN-VPPKANLGDLS-----GLAAG-FKAPIA 176 (314)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCc-CCCcccccccc-----ccccc-CCCccc
Confidence 7899999999999999999999999653 7999999998753210000 00000000000 00000 000000
Q ss_pred cccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccc-ccccccc
Q psy2266 227 GKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYV-NTDLTEH 283 (313)
Q Consensus 227 ~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v-~T~~~~~ 283 (313)
........+..+|++||+|+..+++.+++++.. +.||+|++|+||+| +|+|.++
T Consensus 177 ~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~---~~gi~v~~v~PG~v~~T~l~~~ 231 (314)
T TIGR01289 177 MIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHD---ETGITFASLYPGCIADTGLFRE 231 (314)
T ss_pred ccCCCCcchhhhHHHhHHHHHHHHHHHHHHhcc---CCCeEEEEecCCcccCCccccc
Confidence 000111234467999999999999888877642 23899999999999 6999764
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=7.1e-09 Score=94.92 Aligned_cols=129 Identities=19% Similarity=0.174 Sum_probs=109.7
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC----CCc----chhhhhhhhcccccHHHHHHHHhhcccCCCce
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP----GSF----GQRAETTLATNFFALVTVCHILFPLLRPHARV 181 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~----~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~i 181 (313)
+.+|..++++++++++.+.+.+|++|+||||||.... +++ .++|++++++|+.|++.+++.++|.|+++|+|
T Consensus 62 ~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~I 141 (256)
T PRK07889 62 LELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSI 141 (256)
T ss_pred EeCCCCCHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceE
Confidence 5678889999999999999999999999999998643 233 26788899999999999999999999988999
Q ss_pred EEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCC
Q psy2266 182 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDK 261 (313)
Q Consensus 182 v~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~ 261 (313)
++++|... . +.+....|++||+|+..|+|+++.++++.
T Consensus 142 v~is~~~~-~----------------------------------------~~~~~~~Y~asKaal~~l~~~la~el~~~- 179 (256)
T PRK07889 142 VGLDFDAT-V----------------------------------------AWPAYDWMGVAKAALESTNRYLARDLGPR- 179 (256)
T ss_pred EEEeeccc-c----------------------------------------cCCccchhHHHHHHHHHHHHHHHHHhhhc-
Confidence 99987542 1 01223459999999999999999988766
Q ss_pred CCCCeEEEeecccccccccccc
Q psy2266 262 RRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 262 ~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
||+||+|+||+|+|++.+.
T Consensus 180 ---gIrvn~v~PG~v~T~~~~~ 198 (256)
T PRK07889 180 ---GIRVNLVAAGPIRTLAAKA 198 (256)
T ss_pred ---CeEEEeeccCcccChhhhc
Confidence 9999999999999998664
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=6.7e-09 Score=94.34 Aligned_cols=97 Identities=13% Similarity=0.104 Sum_probs=74.1
Q ss_pred cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
++|.+|+.+++........ .+.+ + ....+|..++++++++++.+.+.+|++|+|+||||.....++ .++
T Consensus 31 ~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~ 109 (253)
T PRK05867 31 EAGAQVAIAARHLDALEKL-ADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEE 109 (253)
T ss_pred HCCCEEEEEcCCHHHHHHH-HHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHH
Confidence 4567777776543332211 1111 1 124568889999999999999999999999999998776665 368
Q ss_pred hhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 153 AETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
|+.++++|+.|++.++++++|.|+++++
T Consensus 110 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 137 (253)
T PRK05867 110 FQRLQNTNVTGVFLTAQAAAKAMVKQGQ 137 (253)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999987654
|
|
| >KOG1207|consensus | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.1e-09 Score=91.13 Aligned_cols=126 Identities=22% Similarity=0.174 Sum_probs=97.7
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++...-+..++.|+++++.++++. ..++.+|.||||||+.-..++.+.+ ++|++.|.+|+++++.++|.+.+-+.
T Consensus 49 ~e~p~~I~Pi~~Dls~wea~~~~l----~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv 124 (245)
T KOG1207|consen 49 KETPSLIIPIVGDLSAWEALFKLL----VPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLV 124 (245)
T ss_pred hhCCcceeeeEecccHHHHHHHhh----cccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhh
Confidence 344445778899999876655433 3467999999999999888888887 99999999999999999999877663
Q ss_pred C---CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEecc
Q psy2266 84 P---HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTA 141 (313)
Q Consensus 84 ~---~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna 141 (313)
. .|.||++||+++...-. +|+. +...+.+...+.+-.+-..|+=.+.+|..
T Consensus 125 ~R~~~GaIVNvSSqas~R~~~-----nHtv--YcatKaALDmlTk~lAlELGp~kIRVNsV 178 (245)
T KOG1207|consen 125 DRQIKGAIVNVSSQASIRPLD-----NHTV--YCATKAALDMLTKCLALELGPQKIRVNSV 178 (245)
T ss_pred hccCCceEEEecchhcccccC-----CceE--EeecHHHHHHHHHHHHHhhCcceeEeecc
Confidence 3 47799999998765333 1333 33456777888888888889888888876
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.8e-07 Score=85.61 Aligned_cols=152 Identities=11% Similarity=0.095 Sum_probs=90.3
Q ss_pred eEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccC----Cc-
Q psy2266 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP----HA- 86 (313)
Q Consensus 12 ~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~----~g- 86 (313)
..+.+|++|.++++ +.++++|+||||||+.... ....++|++++++|+.+++.++|++.|.|++ ++
T Consensus 61 ~~~~~D~~~~~~~~-------~~~~~iDilVnnAG~~~~~--~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~ 131 (245)
T PRK12367 61 EWIKWECGKEESLD-------KQLASLDVLILNHGINPGG--RQDPENINKALEINALSSWRLLELFEDIALNNNSQIPK 131 (245)
T ss_pred eEEEeeCCCHHHHH-------HhcCCCCEEEECCccCCcC--CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCe
Confidence 56789999988765 3468999999999986432 1223899999999999999999999999954 24
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHH---HHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLL---DMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
.+++.+|.++.... . ...+..++.++. .+.........+.++.+++.- ++++..++.. .....
T Consensus 132 ~iiv~ss~a~~~~~-~-------~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~---pg~~~t~~~~---~~~~~ 197 (245)
T PRK12367 132 EIWVNTSEAEIQPA-L-------SPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLI---LGPFRSELNP---IGIMS 197 (245)
T ss_pred EEEEEecccccCCC-C-------CchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEec---CCCcccccCc---cCCCC
Confidence 34455555443211 0 011222333332 333334333345555554432 2333222211 11345
Q ss_pred HHHHHHHHhhcccCCCceEEecC
Q psy2266 164 LVTVCHILFPLLRPHARVVNVAS 186 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss 186 (313)
+-.+.+..+..+.++.+.++...
T Consensus 198 ~~~vA~~i~~~~~~~~~~~~~~~ 220 (245)
T PRK12367 198 ADFVAKQILDQANLGLYLIIVTP 220 (245)
T ss_pred HHHHHHHHHHHHhcCCceEEEec
Confidence 66677777777766555444433
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.2e-08 Score=83.78 Aligned_cols=106 Identities=22% Similarity=0.305 Sum_probs=94.8
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhhcccCCCceEEec
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 185 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vs 185 (313)
..+|..+.++++++++.+.++++++|++++|||....+++. +.|+++|++|+.+++.+.+.++| +++|+||++|
T Consensus 57 ~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~g~iv~~s 134 (167)
T PF00106_consen 57 IECDLSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QGGGKIVNIS 134 (167)
T ss_dssp EESETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HTTEEEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee--ccccceEEec
Confidence 45677899999999999999999999999999999877763 78999999999999999999999 7789999999
Q ss_pred CCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhh
Q psy2266 186 SKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATL 257 (313)
Q Consensus 186 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l 257 (313)
|..+..+ ..+..+|++||+|+.+|++.+++|+
T Consensus 135 S~~~~~~----------------------------------------~~~~~~Y~askaal~~~~~~la~e~ 166 (167)
T PF00106_consen 135 SIAGVRG----------------------------------------SPGMSAYSASKAALRGLTQSLAAEL 166 (167)
T ss_dssp EGGGTSS----------------------------------------STTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhccC----------------------------------------CCCChhHHHHHHHHHHHHHHHHHhc
Confidence 9999762 3344579999999999999999886
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.8e-08 Score=94.01 Aligned_cols=67 Identities=22% Similarity=0.239 Sum_probs=49.5
Q ss_pred cccCCceEEEEecccccccCCCchhh-------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc
Q psy2266 81 LLRPHARVVNVASKLGMLYNVPSQEL-------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF 149 (313)
Q Consensus 81 ~m~~~g~IV~isS~~~~~~~~~~~~~-------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~ 149 (313)
+.+.|..+|.+.+....++... +++ + +...+|..+.++.+.+++++...||++|+||||||... ..+
T Consensus 32 la~~G~~l~lvar~~rrl~~v~-~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~-~~~ 106 (282)
T KOG1205|consen 32 LAKRGAKLVLVARRARRLERVA-EELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISL-VGF 106 (282)
T ss_pred HHhCCCceEEeehhhhhHHHHH-HHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCcccc-ccc
Confidence 4455677777777766654441 111 1 22467888999999999999999999999999999988 443
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.5e-07 Score=95.58 Aligned_cols=58 Identities=9% Similarity=0.136 Sum_probs=41.6
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHH
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILF 79 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~ 79 (313)
++.++.+|++|.+++.+ .++++|+||||||..... . .+|...+++|+.+...+++++.
T Consensus 139 ~v~iV~gDLtD~esI~~-------aLggiDiVVn~AG~~~~~----v-~d~~~~~~VN~~Gt~nLl~Aa~ 196 (576)
T PLN03209 139 KLEIVECDLEKPDQIGP-------ALGNASVVICCIGASEKE----V-FDVTGPYRIDYLATKNLVDAAT 196 (576)
T ss_pred ceEEEEecCCCHHHHHH-------HhcCCCEEEEcccccccc----c-cchhhHHHHHHHHHHHHHHHHH
Confidence 57889999999887654 457899999999975421 1 2456667777777777777654
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.2e-08 Score=92.71 Aligned_cols=67 Identities=21% Similarity=0.283 Sum_probs=59.0
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CCCc----chhhhhhhhcccccHHHHHHHHhhccc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PGSF----GQRAETTLATNFFALVTVCHILFPLLR 176 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~ 176 (313)
..+|..+.++++++++.+.+.+|++|+||||||... ..++ .++|+.++++|+.|++.++++++|.|+
T Consensus 111 ~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 182 (300)
T PRK06128 111 LPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLP 182 (300)
T ss_pred EecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcC
Confidence 457888999999999999999999999999999753 3333 378999999999999999999999885
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.2e-07 Score=82.32 Aligned_cols=89 Identities=13% Similarity=0.090 Sum_probs=68.0
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCCChhHHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFGQRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.+...+.+|+++.++++++++.+.+.||+||++|||||+.... .+++.+++.++ .+|+.+.+.+++.+.+.|++
T Consensus 62 ~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 139 (169)
T PRK06720 62 NLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQENDSN--VLCINDVWIEIKQLTSSFMK 139 (169)
T ss_pred hcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhHhh--ceeccHHHHHHHHHHHHHHh
Confidence 3466677889999999999999999999999999999999998754 55554433344 66777778899999888744
Q ss_pred ---------CceEEEEecccc
Q psy2266 85 ---------HARVVNVASKLG 96 (313)
Q Consensus 85 ---------~g~IV~isS~~~ 96 (313)
.||.-.||+.+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~ 160 (169)
T PRK06720 140 QQEEVVLSDLPIFGIIGTKGQ 160 (169)
T ss_pred cCCEEEeecCceeeEeccccc
Confidence 366666666543
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=7.5e-08 Score=87.31 Aligned_cols=67 Identities=12% Similarity=0.042 Sum_probs=54.7
Q ss_pred hcccCCCHHHHHHHHHHHHH----HcC--CccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhccc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQ----YNG--PLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLR 176 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~----~~G--~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~ 176 (313)
..+|..+.+++..+++.+.+ .+| ++|+|+||||.....++ .+.|+.++++|+.|++.+++.++|.|+
T Consensus 59 ~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~ 135 (252)
T PRK12747 59 IGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR 135 (252)
T ss_pred EecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 34577788888888888765 345 89999999997654444 367999999999999999999999884
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.1e-07 Score=80.43 Aligned_cols=123 Identities=12% Similarity=0.056 Sum_probs=104.6
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCceEEec
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 185 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vs 185 (313)
..+|..++++++++++. +|++|++++|||.....++ .++|.+.+++|+.|++.+++.++|+|+++|+|+++|
T Consensus 36 ~~~D~~~~~~~~~~~~~----~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 111 (199)
T PRK07578 36 VQVDITDPASIRALFEK----VGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS 111 (199)
T ss_pred eEecCCChHHHHHHHHh----cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 45688888888887654 6899999999998766654 368999999999999999999999998889999999
Q ss_pred CCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCC
Q psy2266 186 SKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPD 265 (313)
Q Consensus 186 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~g 265 (313)
|..+... ..+..+|++||+|+.+|++.++.++ +. |
T Consensus 112 s~~~~~~----------------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~-~~----g 146 (199)
T PRK07578 112 GILSDEP----------------------------------------IPGGASAATVNGALEGFVKAAALEL-PR----G 146 (199)
T ss_pred ccccCCC----------------------------------------CCCchHHHHHHHHHHHHHHHHHHHc-cC----C
Confidence 9887541 2234569999999999999988887 54 9
Q ss_pred eEEEeecccccccccc
Q psy2266 266 IIVNPVHPGYVNTDLT 281 (313)
Q Consensus 266 I~vn~v~PG~v~T~~~ 281 (313)
|+||+|+||+++|++.
T Consensus 147 i~v~~i~Pg~v~t~~~ 162 (199)
T PRK07578 147 IRINVVSPTVLTESLE 162 (199)
T ss_pred eEEEEEcCCcccCchh
Confidence 9999999999999975
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=8.7e-08 Score=89.73 Aligned_cols=68 Identities=22% Similarity=0.195 Sum_probs=59.3
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CCCc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PGSF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
..+|..+.+++.++++.+.+.+|++|+++||||... .+++ .++|+.++++|+.|++.++++++|.|++
T Consensus 105 ~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 177 (294)
T PRK07985 105 LPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK 177 (294)
T ss_pred EEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc
Confidence 467888999999999999999999999999999743 2333 3789999999999999999999999964
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.3e-07 Score=85.19 Aligned_cols=156 Identities=21% Similarity=0.132 Sum_probs=122.7
Q ss_pred cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAET 155 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~ 155 (313)
+++.+++.+++......+.. ..++ ....+|..+.+++..+.+.+.+.+|++|+++||||.....++ .++|+.
T Consensus 28 ~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~ 106 (249)
T PRK06500 28 AEGARVAITGRDPASLEAAR-AELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDR 106 (249)
T ss_pred HCCCEEEEecCCHHHHHHHH-HHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHH
Confidence 45668877766433222111 1111 124567789999999999999999999999999998765554 368899
Q ss_pred hhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCC
Q psy2266 156 TLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWP 235 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (313)
++++|+.|++.++++++|.|++++++++++|..+... ...
T Consensus 107 ~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~----------------------------------------~~~ 146 (249)
T PRK06500 107 SFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIG----------------------------------------MPN 146 (249)
T ss_pred HHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccC----------------------------------------CCC
Confidence 9999999999999999999987889999999876541 123
Q ss_pred CCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 236 EFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 236 ~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+|+++|+++..+++.++.++... ||++++|+||+++|++.+.
T Consensus 147 ~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~i~pg~~~t~~~~~ 190 (249)
T PRK06500 147 SSVYAASKAALLSLAKTLSGELLPR----GIRVNAVSPGPVQTPLYGK 190 (249)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEeeCcCCCHHHHh
Confidence 3569999999999999998887655 9999999999999998654
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.3e-07 Score=83.44 Aligned_cols=129 Identities=17% Similarity=0.115 Sum_probs=109.0
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCceEEe-
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHARVVNV- 184 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~v- 184 (313)
..+|..+.++++++++.+.+.+|++|+++||||.....++ .++|+.++++|+.|++.+++.++|.|+++|+|+++
T Consensus 66 ~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ 145 (257)
T PRK12744 66 FQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLV 145 (257)
T ss_pred EecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEe
Confidence 4678889999999999999999999999999998665554 36799999999999999999999999888888887
Q ss_pred cCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCC
Q psy2266 185 ASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRP 264 (313)
Q Consensus 185 ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~ 264 (313)
||..+.. ......|++||+|+..+++.+++++.+.
T Consensus 146 ss~~~~~-----------------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~---- 180 (257)
T PRK12744 146 TSLLGAF-----------------------------------------TPFYSAYAGSKAPVEHFTRAASKEFGAR---- 180 (257)
T ss_pred cchhccc-----------------------------------------CCCcccchhhHHHHHHHHHHHHHHhCcC----
Confidence 4544422 1223569999999999999988888765
Q ss_pred CeEEEeecccccccccccc
Q psy2266 265 DIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 265 gI~vn~v~PG~v~T~~~~~ 283 (313)
||+||+|+||++.|++...
T Consensus 181 ~i~v~~v~pg~v~t~~~~~ 199 (257)
T PRK12744 181 GISVTAVGPGPMDTPFFYP 199 (257)
T ss_pred ceEEEEEecCccccchhcc
Confidence 9999999999999997543
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.5e-07 Score=84.50 Aligned_cols=172 Identities=13% Similarity=0.082 Sum_probs=123.3
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC----C--C
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA----P--G 147 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~----~--~ 147 (313)
++++..+ +++.+++.+++......... ..++ ....+|..++++++++++.+.+ ++|+++||||... + .
T Consensus 14 ~~ia~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~~ag~~~~~~~~~~~ 89 (223)
T PRK05884 14 RTIAEGFRNDGHKVTLVGARRDDLEVAA-KELDVDAIVCDNTDPASLEEARGLFPH---HLDTIVNVPAPSWDAGDPRTY 89 (223)
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhccCcEEecCCCCHHHHHHHHHHHhh---cCcEEEECCCccccCCCCccc
Confidence 4444444 45778888776543332211 1111 2345788899999988777653 6999999998521 1 1
Q ss_pred Cc---chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHh
Q psy2266 148 SF---GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLA 224 (313)
Q Consensus 148 ~~---~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (313)
++ .++|++++++|+.|++.++++++|.|+++|+||++||....
T Consensus 90 ~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~---------------------------------- 135 (223)
T PRK05884 90 SLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENPP---------------------------------- 135 (223)
T ss_pred chhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCCC----------------------------------
Confidence 22 36899999999999999999999999888999999997621
Q ss_pred hhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCC---CCcchhhhhhhhh
Q psy2266 225 KEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGV---LTPEQGKIRQKIY 299 (313)
Q Consensus 225 ~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~ 299 (313)
...+|++||+|+.+|+|.++.++++. ||+||+|+||+++|++...... ..+++.+....++
T Consensus 136 ----------~~~~Y~asKaal~~~~~~la~e~~~~----gI~v~~v~PG~v~t~~~~~~~~~p~~~~~~ia~~~~~l 199 (223)
T PRK05884 136 ----------AGSAEAAIKAALSNWTAGQAAVFGTR----GITINAVACGRSVQPGYDGLSRTPPPVAAEIARLALFL 199 (223)
T ss_pred ----------CccccHHHHHHHHHHHHHHHHHhhhc----CeEEEEEecCccCchhhhhccCCCCCCHHHHHHHHHHH
Confidence 22469999999999999998888766 9999999999999998654221 2344444444433
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.9e-07 Score=86.05 Aligned_cols=130 Identities=22% Similarity=0.280 Sum_probs=112.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-CCc----chhhhhhhhcccccHHHHHHHHhhcccCCCceEEe
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-GSF----GQRAETTLATNFFALVTVCHILFPLLRPHARVVNV 184 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~v 184 (313)
..+|..+.++++++++.+.+.+|++|++|||||.... .++ .++|..++++|+.|++.++++++|.|+++++||++
T Consensus 101 ~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~i 180 (290)
T PRK06701 101 IPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINT 180 (290)
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 4678889999999999999999999999999998643 333 36889999999999999999999999888999999
Q ss_pred cCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCC
Q psy2266 185 ASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRP 264 (313)
Q Consensus 185 ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~ 264 (313)
||..+... ......|++||+|+..+++.++.++.+.
T Consensus 181 sS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~---- 216 (290)
T PRK06701 181 GSITGYEG----------------------------------------NETLIDYSATKGAIHAFTRSLAQSLVQK---- 216 (290)
T ss_pred ecccccCC----------------------------------------CCCcchhHHHHHHHHHHHHHHHHHhhhc----
Confidence 99987652 1223469999999999999999988765
Q ss_pred CeEEEeecccccccccccc
Q psy2266 265 DIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 265 gI~vn~v~PG~v~T~~~~~ 283 (313)
||+|++|+||+|+|++...
T Consensus 217 gIrv~~i~pG~v~T~~~~~ 235 (290)
T PRK06701 217 GIRVNAVAPGPIWTPLIPS 235 (290)
T ss_pred CeEEEEEecCCCCCccccc
Confidence 9999999999999998654
|
|
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.8e-07 Score=87.20 Aligned_cols=129 Identities=12% Similarity=0.081 Sum_probs=77.6
Q ss_pred hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCc
Q psy2266 109 TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKL 188 (313)
Q Consensus 109 ~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~ 188 (313)
.+.||..+.+++...++.+.+.+|++|+||||||+-...++.+.-++.++--+. ||+-+..
T Consensus 90 ~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~-------------------vN~~~~f 150 (300)
T KOG1201|consen 90 AYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFD-------------------VNTIAHF 150 (300)
T ss_pred EEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHH-------------------HhhHHHH
Confidence 367788899999999999999999999999999998888765433333322111 1111111
Q ss_pred cccccccChhhhhhhhccccc-hHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeE
Q psy2266 189 GMLYNVPSQELRQTLFNESLT-EDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDII 267 (313)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~ 267 (313)
+ .++.|++.-.-+ +.-+-.- .+..++-..++.++=++--.-+...++.|..|++..+
T Consensus 151 ~--------t~kaFLP~M~~~~~GHIV~I------------aS~aG~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~-- 208 (300)
T KOG1201|consen 151 W--------TTKAFLPKMLENNNGHIVTI------------ASVAGLFGPAGLADYCASKFAAVGFHESLSMELRALG-- 208 (300)
T ss_pred H--------HHHHHhHHHHhcCCceEEEe------------hhhhcccCCccchhhhhhHHHHHHHHHHHHHHHHhcC--
Confidence 1 223333332211 1000000 1123554555667777666777888899998877766
Q ss_pred EEeecccccccccccc
Q psy2266 268 VNPVHPGYVNTDLTEH 283 (313)
Q Consensus 268 vn~v~PG~v~T~~~~~ 283 (313)
..| |+|-+.-.
T Consensus 209 ----~~~-IktTlv~P 219 (300)
T KOG1201|consen 209 ----KDG-IKTTLVCP 219 (300)
T ss_pred ----CCC-eeEEEEee
Confidence 334 77765443
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.5e-06 Score=83.10 Aligned_cols=163 Identities=15% Similarity=0.049 Sum_probs=102.3
Q ss_pred cCCceEEEEecccccccCCC-chhh--hh-hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVP-SQEL--RQ-TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLA 158 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~-~~~~--~~-~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~ 158 (313)
+++..|+.+++......... .... +. ...+|..+.+++.++++.. ++|+++|+|+........+++...++
T Consensus 26 ~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vih~A~~~~~~~~~~~~~~~~~ 100 (349)
T TIGR02622 26 ELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF-----KPEIVFHLAAQPLVRKSYADPLETFE 100 (349)
T ss_pred HCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc-----CCCEEEECCcccccccchhCHHHHHH
Confidence 45778887765443211110 0011 11 2456777888887777753 58999999996544434456778999
Q ss_pred cccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCc
Q psy2266 159 TNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFS 238 (313)
Q Consensus 159 ~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
+|+.|++.+++++.. ....+++|++||........... ..++ +. ...+...
T Consensus 101 ~N~~g~~~ll~a~~~-~~~~~~iv~~SS~~vyg~~~~~~---------~~~e-----------------~~--~~~p~~~ 151 (349)
T TIGR02622 101 TNVMGTVNLLEAIRA-IGSVKAVVNVTSDKCYRNDEWVW---------GYRE-----------------TD--PLGGHDP 151 (349)
T ss_pred HhHHHHHHHHHHHHh-cCCCCEEEEEechhhhCCCCCCC---------CCcc-----------------CC--CCCCCCc
Confidence 999999999998754 22246899999975432100000 0000 00 1123456
Q ss_pred hhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccc
Q psy2266 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD 279 (313)
Q Consensus 239 Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~ 279 (313)
|+.||.+.+.+++.++.++.+....+|++++++.||.+-.|
T Consensus 152 Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp 192 (349)
T TIGR02622 152 YSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGG 192 (349)
T ss_pred chhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCC
Confidence 99999999999987776654321113899999999998765
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.7e-07 Score=82.56 Aligned_cols=146 Identities=18% Similarity=0.210 Sum_probs=111.8
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCceEEec
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 185 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vs 185 (313)
..+|..+.+++.+++ +.+|++|++++|||.....+. .++|+.++++|+.|++.+++.++|.|+++|+||++|
T Consensus 56 ~~~D~~~~~~~~~~~----~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 131 (237)
T PRK12742 56 VQTDSADRDAVIDVV----RKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIG 131 (237)
T ss_pred EecCCCCHHHHHHHH----HHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 346777877766655 357899999999998655443 368999999999999999999999998889999999
Q ss_pred CCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCC
Q psy2266 186 SKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPD 265 (313)
Q Consensus 186 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~g 265 (313)
|..+...+ ..+..+|+++|+++..+++.++.++.+. |
T Consensus 132 S~~~~~~~---------------------------------------~~~~~~Y~~sKaa~~~~~~~la~~~~~~----g 168 (237)
T PRK12742 132 SVNGDRMP---------------------------------------VAGMAAYAASKSALQGMARGLARDFGPR----G 168 (237)
T ss_pred ccccccCC---------------------------------------CCCCcchHHhHHHHHHHHHHHHHHHhhh----C
Confidence 98874311 2234569999999999999888887765 9
Q ss_pred eEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 266 IIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 266 I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
|+||+|+||+++|++.... .+ ..+......|++|++.
T Consensus 169 i~v~~v~Pg~~~t~~~~~~---~~-~~~~~~~~~~~~~~~~ 205 (237)
T PRK12742 169 ITINVVQPGPIDTDANPAN---GP-MKDMMHSFMAIKRHGR 205 (237)
T ss_pred eEEEEEecCcccCCccccc---cH-HHHHHHhcCCCCCCCC
Confidence 9999999999999986542 11 1122333456666654
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.8e-07 Score=82.37 Aligned_cols=65 Identities=12% Similarity=0.246 Sum_probs=56.5
Q ss_pred cccCCC-HHHHHHHHHHHHHHcCCccEEEeccCcCCCC-Cc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 111 FNESLT-EDQLLDMMTDYVQYNGPLDKILDTAMDTAPG-SF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 111 ~~d~~~-~~~~~~~~~~~~~~~G~lD~Linna~~~~~~-~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
.+|..+ .++++.+++.+.+.+|++|+|+||||....+ ++ .++|+.++++|+.|.+.+++++.|.|
T Consensus 63 ~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~ 133 (251)
T COG1028 63 AADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLM 133 (251)
T ss_pred EecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhh
Confidence 367776 9999999999999999999999999997663 54 37999999999999999999777754
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.8e-06 Score=80.02 Aligned_cols=77 Identities=14% Similarity=0.132 Sum_probs=57.0
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.++.++.+|++|.++++++++ ++|++|||||.... ....+.+...+++|+.+++.+++++.+.+. .++|
T Consensus 56 ~~~~~~~~D~~d~~~~~~~~~-------~~d~vih~A~~~~~---~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~-~~~i 124 (325)
T PLN02989 56 ERLKLFKADLLDEGSFELAID-------GCETVFHTASPVAI---TVKTDPQVELINPAVNGTINVLRTCTKVSS-VKRV 124 (325)
T ss_pred CceEEEeCCCCCchHHHHHHc-------CCCEEEEeCCCCCC---CCCCChHHHHHHHHHHHHHHHHHHHHHcCC-ceEE
Confidence 357788999999988877664 58999999996532 111245778889999999999998877542 3577
Q ss_pred EEEecccc
Q psy2266 89 VNVASKLG 96 (313)
Q Consensus 89 V~isS~~~ 96 (313)
|++||...
T Consensus 125 v~~SS~~~ 132 (325)
T PLN02989 125 ILTSSMAA 132 (325)
T ss_pred EEecchhh
Confidence 77777543
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.3e-07 Score=82.34 Aligned_cols=67 Identities=9% Similarity=-0.011 Sum_probs=54.0
Q ss_pred CCceEEEEecccccccCCCch-hhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQ-ELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG 150 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~ 150 (313)
.|..+|..++....+.+.... .--++..||+.|.++.+++++++.+.|..+++||||||+...-.|.
T Consensus 28 lgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt 95 (245)
T COG3967 28 LGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLT 95 (245)
T ss_pred hCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheeeecccccchhhcc
Confidence 366777777777777666333 2335678999999999999999999999999999999998766654
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.38 E-value=4.5e-07 Score=84.01 Aligned_cols=98 Identities=19% Similarity=0.239 Sum_probs=81.7
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhh------hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQT------LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~------~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|..+|.+++....+.++..+....+ ..+|..++++++.+.+++.++++.+|+||||||.-..++
T Consensus 20 ~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~ 99 (265)
T COG0300 20 AELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGP 99 (265)
T ss_pred HHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCCcCCccc
Confidence 3344444 568899999999998877755543333 467888999999999999999999999999999998888
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
|. ++.+.+|++|+.+...++++++|
T Consensus 100 f~~~~~~~~~~mi~lN~~a~~~LT~~~lp 128 (265)
T COG0300 100 FLELSLDEEEEMIQLNILALTRLTKAVLP 128 (265)
T ss_pred hhhCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 84 56778999999999999999999
|
|
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.2e-06 Score=77.26 Aligned_cols=100 Identities=13% Similarity=0.160 Sum_probs=75.7
Q ss_pred HHHHHhcc-cCCceEEEEecccccccCCCchhh----hh-hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 75 CHILFPLL-RPHARVVNVASKLGMLYNVPSQEL----RQ-TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 75 ~ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~----~~-~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
-|+++..| ++|.+++......+.. +.....+ .| .+-+|+.++..++..+++..+.+|.+++|+||||+...+-
T Consensus 27 GrAia~~la~~Garv~v~dl~~~~A-~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~ 105 (256)
T KOG1200|consen 27 GRAIAQLLAKKGARVAVADLDSAAA-EATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGL 105 (256)
T ss_pred HHHHHHHHHhcCcEEEEeecchhhH-HHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccc
Confidence 46666666 4566766655444322 2212212 22 2566778999999999999999999999999999987765
Q ss_pred c----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 149 F----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 149 ~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+ .++|+..+.+|+.|.|++++++...|
T Consensus 106 Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~ 136 (256)
T KOG1200|consen 106 LLRMKQEQWDSVIAVNLTGVFLVTQAAVRAM 136 (256)
T ss_pred eeeccHHHHHHHHHhhchhhHHHHHHHHHHH
Confidence 4 58999999999999999999999865
|
|
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=98.30 E-value=9.6e-07 Score=79.41 Aligned_cols=69 Identities=12% Similarity=0.155 Sum_probs=59.6
Q ss_pred hcccCCCHHHHHHHHHHHHHHcC--CccEEEeccCcCCCCCc-----chhhhhhhhcccccHHHHHHHHhhcccCC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNG--PLDKILDTAMDTAPGSF-----GQRAETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G--~lD~Linna~~~~~~~~-----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
...|+...++++.+++++.+-.| ++|.|+||||...+... .+.|...++||..|++.++++++|+|+++
T Consensus 59 i~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkka 134 (249)
T KOG1611|consen 59 IQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKA 134 (249)
T ss_pred EEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Confidence 34577789999999999999955 99999999999765543 36799999999999999999999999874
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.9e-06 Score=77.16 Aligned_cols=156 Identities=17% Similarity=0.177 Sum_probs=120.8
Q ss_pred cCCceEEEEecccccccCCCch----hhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc--hhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQ----ELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG--QRAETT 156 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~--~~~~~~ 156 (313)
+++..|+.+++........... ...+...+|..++++++++++.+.+.++++|++++|+|.....++. +.++.+
T Consensus 27 ~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~ 106 (238)
T PRK05786 27 KEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEM 106 (238)
T ss_pred HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHH
Confidence 4466777776654332211000 0112346788899999999999999999999999999986554443 678899
Q ss_pred hhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCC
Q psy2266 157 LATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPE 236 (313)
Q Consensus 157 ~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
+++|+.+++.+.+.++|+|++++++|++||..+.... ..+.
T Consensus 107 ~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------------------------------------~~~~ 147 (238)
T PRK05786 107 LTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA---------------------------------------SPDQ 147 (238)
T ss_pred HHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC---------------------------------------CCCc
Confidence 9999999999999999999888999999998764211 1223
Q ss_pred CchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 237 FSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 237 ~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
.+|+.||+++..+++.++.++... ||++++|.||++.|++.
T Consensus 148 ~~Y~~sK~~~~~~~~~~~~~~~~~----gi~v~~i~pg~v~~~~~ 188 (238)
T PRK05786 148 LSYAVAKAGLAKAVEILASELLGR----GIRVNGIAPTTISGDFE 188 (238)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCccCCCCC
Confidence 469999999999998888887655 99999999999999874
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.24 E-value=1e-05 Score=76.94 Aligned_cols=131 Identities=11% Similarity=0.017 Sum_probs=88.3
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCC---ceEEecC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHA---RVVNVAS 186 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g---~iv~vss 186 (313)
..+|..+.++++++++.+ .+|+++|||+....+...+..+..+++|+.|+..+++++.+...+.+ ++|++||
T Consensus 65 ~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss 139 (340)
T PLN02653 65 HYGDLSDASSLRRWLDDI-----KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGS 139 (340)
T ss_pred EEecCCCHHHHHHHHHHc-----CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEecc
Confidence 356777888888877764 58999999998655544456678889999999999999999876544 6778887
Q ss_pred CccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCe
Q psy2266 187 KLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDI 266 (313)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI 266 (313)
....-.. .. ..++ .....+...|+.||.+.+.+++.++.+..-.. ..++
T Consensus 140 ~~vyg~~--~~---------~~~E-------------------~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~-~~~~ 188 (340)
T PLN02653 140 SEMYGST--PP---------PQSE-------------------TTPFHPRSPYAVAKVAAHWYTVNYREAYGLFA-CNGI 188 (340)
T ss_pred HHHhCCC--CC---------CCCC-------------------CCCCCCCChhHHHHHHHHHHHHHHHHHcCCeE-EEee
Confidence 6432110 00 0000 01122345699999999999988776653211 1256
Q ss_pred EEEeeccccc
Q psy2266 267 IVNPVHPGYV 276 (313)
Q Consensus 267 ~vn~v~PG~v 276 (313)
.+|.+.||..
T Consensus 189 ~~~~~gp~~~ 198 (340)
T PLN02653 189 LFNHESPRRG 198 (340)
T ss_pred eccccCCCCC
Confidence 6777778653
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.3e-06 Score=77.92 Aligned_cols=70 Identities=7% Similarity=0.133 Sum_probs=62.9
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
..+|..++++++++++.+.+.+|++|+|+||||.....++ .++|+.++++|+.|++.++++++|.|++.+
T Consensus 60 ~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~ 133 (251)
T PRK12481 60 ITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQG 133 (251)
T ss_pred EEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcC
Confidence 4678889999999999999999999999999998776664 378999999999999999999999998643
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.22 E-value=3.9e-06 Score=76.69 Aligned_cols=91 Identities=12% Similarity=0.132 Sum_probs=70.6
Q ss_pred HHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----ch
Q psy2266 77 ILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQ 151 (313)
Q Consensus 77 a~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~ 151 (313)
+++..+ ++|.+|+.+++...... ..+...+|..++++++++++.+.+.+|++|+|+||||.....++ .+
T Consensus 21 ~ia~~l~~~G~~Vi~~~r~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~ 94 (258)
T PRK06398 21 AVVNRLKEEGSNVINFDIKEPSYN------DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEED 94 (258)
T ss_pred HHHHHHHHCCCeEEEEeCCccccC------ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHH
Confidence 333334 45778887765432211 12335678889999999999999999999999999998766665 36
Q ss_pred hhhhhhhcccccHHHHHHHHhh
Q psy2266 152 RAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+|+.++++|+.|++.+++.++|
T Consensus 95 ~~~~~~~~n~~~~~~l~~~~~~ 116 (258)
T PRK06398 95 EWDRIINVNVNGIFLMSKYTIP 116 (258)
T ss_pred HHHHHHHHhhHHHHHHHHHHHH
Confidence 8999999999999999999998
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.5e-06 Score=85.96 Aligned_cols=71 Identities=13% Similarity=0.169 Sum_probs=63.5
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
..+|..++++++++++.+.+.+|++|+|+||||....+++ .++|+.++++|+.|++.++++++|.|++.+.
T Consensus 369 ~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~ 443 (582)
T PRK05855 369 YRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGT 443 (582)
T ss_pred EEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 4578889999999999999999999999999999776665 3689999999999999999999999987553
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.5e-06 Score=76.99 Aligned_cols=154 Identities=20% Similarity=0.118 Sum_probs=117.1
Q ss_pred cCCceEEEEecccccccCCCchhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTL 157 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~ 157 (313)
++|.+++.+++......+......+ ....+|..+.++++++++.+. ..+|++++|||.....+. .++|+.++
T Consensus 23 ~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~---~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~ 99 (240)
T PRK06101 23 KQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLP---FIPELWIFNAGDCEYMDDGKVDATLMARVF 99 (240)
T ss_pred hCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcc---cCCCEEEEcCcccccCCCCCCCHHHHHHHH
Confidence 4577888777654333222111111 224668889999998887654 247999999987543332 36789999
Q ss_pred hcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCC
Q psy2266 158 ATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEF 237 (313)
Q Consensus 158 ~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
++|+.|++++++.+.|.|+++++|+++||..+... ..+..
T Consensus 100 ~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~----------------------------------------~~~~~ 139 (240)
T PRK06101 100 NVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA----------------------------------------LPRAE 139 (240)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC----------------------------------------CCCCc
Confidence 99999999999999999988889999999887541 23345
Q ss_pred chhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 238 SYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 238 ~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.|++||+++..+++.++.++... ||++++|.||+|+|++...
T Consensus 140 ~Y~asK~a~~~~~~~l~~e~~~~----gi~v~~v~pg~i~t~~~~~ 181 (240)
T PRK06101 140 AYGASKAAVAYFARTLQLDLRPK----GIEVVTVFPGFVATPLTDK 181 (240)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhc----CceEEEEeCCcCCCCCcCC
Confidence 69999999999999988888765 9999999999999998654
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=3.4e-06 Score=77.00 Aligned_cols=93 Identities=16% Similarity=0.207 Sum_probs=70.8
Q ss_pred cCCceEEEEecccccccCCCchhh------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~ 151 (313)
+.+.+|+.+++............. + ....+|..+.++++++++.+.+.+|++|+||||||.....++ .+
T Consensus 30 ~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~ 109 (265)
T PRK07062 30 EAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDD 109 (265)
T ss_pred HCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHH
Confidence 457788777765433322111100 1 124568889999999999999999999999999998766665 36
Q ss_pred hhhhhhhcccccHHHHHHHHhhcc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+|+.++++|+.|++.++++++|.|
T Consensus 110 ~~~~~~~~n~~~~~~~~~~~~~~~ 133 (265)
T PRK07062 110 AWRDELELKYFSVINPTRAFLPLL 133 (265)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHH
Confidence 899999999999999999999976
|
|
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=98.14 E-value=3.3e-06 Score=78.69 Aligned_cols=111 Identities=14% Similarity=0.064 Sum_probs=81.8
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhh--------hhhhcccCCCHHHHHHHHHHHHHH-cCCccEEEeccCcCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQEL--------RQTLFNESLTEDQLLDMMTDYVQY-NGPLDKILDTAMDTA 145 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~~~~~~-~G~lD~Linna~~~~ 145 (313)
|+++..+ +.|.+++..++....+.+...... .....+|..++++.+++++...++ +|++|+|+||||...
T Consensus 22 ~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~ 101 (270)
T KOG0725|consen 22 KAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALG 101 (270)
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCC
Confidence 4554444 568888888887766544332211 122567778999999999999999 799999999999986
Q ss_pred CC-Cc----chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecC
Q psy2266 146 PG-SF----GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVAS 186 (313)
Q Consensus 146 ~~-~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss 186 (313)
.. ++ .+.|+..+++|+.|.+..++...+.|.++++--.+-.
T Consensus 102 ~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~ 147 (270)
T KOG0725|consen 102 LTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVN 147 (270)
T ss_pred CCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEE
Confidence 55 33 4799999999999988888888888887555444333
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=3.9e-06 Score=77.10 Aligned_cols=92 Identities=15% Similarity=0.202 Sum_probs=69.6
Q ss_pred cCCceEEEEecccccccCCCch-----hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQ-----ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~-----~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
++|.+|+.+++........... +.+ ....+|..++++++++++.+. ++|++|+++||||....+++ .++
T Consensus 30 ~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g~iD~lv~nag~~~~~~~~~~~~~~ 108 (263)
T PRK08339 30 RAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NIGEPDIFFFSTGGPKPGYFMEMSMED 108 (263)
T ss_pred HCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hhCCCcEEEECCCCCCCCCcccCCHHH
Confidence 4577888777654433222111 011 224668889999999999885 69999999999998766655 378
Q ss_pred hhhhhhcccccHHHHHHHHhhcc
Q psy2266 153 AETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
|+.++++|+.|++.++++++|.|
T Consensus 109 ~~~~~~~n~~~~~~~~~~~l~~m 131 (263)
T PRK08339 109 WEGAVKLLLYPAVYLTRALVPAM 131 (263)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHH
Confidence 99999999999999999999977
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=4.2e-06 Score=74.56 Aligned_cols=156 Identities=19% Similarity=0.188 Sum_probs=115.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCch---hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc-
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQ---ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~---~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~- 149 (313)
+++++.+ +++.+|+.+++........... +.+ +.+.+|..++++++++++. +|++|+|+||||....+++
T Consensus 11 ~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~~ag~~~~~~~~ 86 (230)
T PRK07041 11 LALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAE----AGPFDHVVITAADTPGGPVR 86 (230)
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHh----cCCCCEEEECCCCCCCCChh
Confidence 4444444 4567887777653322211100 111 2245677898888777654 6899999999998776665
Q ss_pred ---chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhh
Q psy2266 150 ---GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKE 226 (313)
Q Consensus 150 ---~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (313)
.++|+.++++|+.+++.+++ .+.+++.|+||++||..+...
T Consensus 87 ~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~~g~iv~~ss~~~~~~---------------------------------- 130 (230)
T PRK07041 87 ALPLAAAQAAMDSKFWGAYRVAR--AARIAPGGSLTFVSGFAAVRP---------------------------------- 130 (230)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHh--hhhhcCCeEEEEECchhhcCC----------------------------------
Confidence 36899999999999999999 667777899999999988651
Q ss_pred cccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 227 GKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 227 ~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+...|+++|+++..+++.++.++. +|+||+++||+++|++...
T Consensus 131 ------~~~~~~Y~~sK~a~~~~~~~la~e~~------~irv~~i~pg~~~t~~~~~ 175 (230)
T PRK07041 131 ------SASGVLQGAINAALEALARGLALELA------PVRVNTVSPGLVDTPLWSK 175 (230)
T ss_pred ------CCcchHHHHHHHHHHHHHHHHHHHhh------CceEEEEeecccccHHHHh
Confidence 22335699999999999998888875 4999999999999998654
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=4.3e-06 Score=76.76 Aligned_cols=56 Identities=13% Similarity=0.162 Sum_probs=47.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC----Cc-----chhhhhhhhcccccHH
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG----SF-----GQRAETTLATNFFALV 165 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~----~~-----~~~~~~~~~~N~~g~~ 165 (313)
..+|..++++++.+++.+.+++|++|+||||||..... ++ .+.|+.++++|+.+++
T Consensus 61 ~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~ 125 (261)
T PRK08690 61 FRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLP 125 (261)
T ss_pred EECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHH
Confidence 56788899999999999999999999999999986532 22 2578889999998875
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=5e-06 Score=75.53 Aligned_cols=64 Identities=13% Similarity=0.081 Sum_probs=57.7
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..++++++++++.+.+.+|++|++++|||....+++ .++|+.++++|+.|++++++.++|
T Consensus 56 ~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~ 123 (255)
T PRK06463 56 IKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLP 123 (255)
T ss_pred EEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence 4668889999999999999999999999999998765554 368999999999999999999998
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=6.3e-06 Score=73.37 Aligned_cols=170 Identities=18% Similarity=0.225 Sum_probs=119.0
Q ss_pred HHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC--C----c
Q psy2266 77 ILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG--S----F 149 (313)
Q Consensus 77 a~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~--~----~ 149 (313)
++++.+ +.+.+++.+........+..... .....+|..+.++++.+++.+. .+++|++++|||..... + .
T Consensus 16 ~la~~L~~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~D~~~~~~v~~~~~~~~--~~~~d~vi~~ag~~~~~~~~~~~~~ 92 (222)
T PRK06953 16 EFVRQYRADGWRVIATARDAAALAALQALG-AEALALDVADPASVAGLAWKLD--GEALDAAVYVAGVYGPRTEGVEPIT 92 (222)
T ss_pred HHHHHHHhCCCEEEEEECCHHHHHHHHhcc-ceEEEecCCCHHHHHHHHHHhc--CCCCCEEEECCCcccCCCCCcccCC
Confidence 334333 44668877766543322211111 1235678889988888776653 25899999999986322 2 2
Q ss_pred chhhhhhhhcccccHHHHHHHHhhcccC-CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcc
Q psy2266 150 GQRAETTLATNFFALVTVCHILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGK 228 (313)
Q Consensus 150 ~~~~~~~~~~N~~g~~~~~~~~~p~l~~-~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (313)
.++|+.++++|+.|++.++++++|+|++ +|+++++||..+.....+
T Consensus 93 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------------------------- 139 (222)
T PRK06953 93 REDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT--------------------------------- 139 (222)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc---------------------------------
Confidence 4789999999999999999999999965 589999999887552110
Q ss_pred cccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchh
Q psy2266 229 DKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQG 292 (313)
Q Consensus 229 ~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~ 292 (313)
..+...|+++|+++..+++.++.++ .+|++|+|+||+++|++.++.....+++.
T Consensus 140 ----~~~~~~Y~~sK~a~~~~~~~~~~~~------~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~ 193 (222)
T PRK06953 140 ----GTTGWLYRASKAALNDALRAASLQA------RHATCIALHPGWVRTDMGGAQAALDPAQS 193 (222)
T ss_pred ----CCCccccHHhHHHHHHHHHHHhhhc------cCcEEEEECCCeeecCCCCCCCCCCHHHH
Confidence 1122359999999999997766653 27999999999999999776444444443
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=3.8e-06 Score=76.21 Aligned_cols=153 Identities=13% Similarity=0.118 Sum_probs=118.0
Q ss_pred cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
+.|.+|+.+++......... ..+ + ....+|..++++++++++.+.+.+|++|++|||||.....++ .++
T Consensus 23 ~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~ 101 (252)
T PRK07677 23 EEGANVVITGRTKEKLEEAK-LEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNG 101 (252)
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHH
Confidence 45677777765543222111 111 1 124568889999999999999999999999999997544443 367
Q ss_pred hhhhhhcccccHHHHHHHHhhcccC---CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhccc
Q psy2266 153 AETTLATNFFALVTVCHILFPLLRP---HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKD 229 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l~~---~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (313)
|+.++++|+.|++.++++++|.|.+ +|+|+++||..+...
T Consensus 102 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~------------------------------------- 144 (252)
T PRK07677 102 WNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDA------------------------------------- 144 (252)
T ss_pred HHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccC-------------------------------------
Confidence 9999999999999999999998743 489999999987541
Q ss_pred ccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccc
Q psy2266 230 KEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD 279 (313)
Q Consensus 230 ~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~ 279 (313)
.....+|++||+|+..|++.++.++.+ ++||+||+|+||+|+|+
T Consensus 145 ---~~~~~~Y~~sKaa~~~~~~~la~e~~~---~~gi~v~~v~PG~v~~~ 188 (252)
T PRK07677 145 ---GPGVIHSAAAKAGVLAMTRTLAVEWGR---KYGIRVNAIAPGPIERT 188 (252)
T ss_pred ---CCCCcchHHHHHHHHHHHHHHHHHhCc---ccCeEEEEEeecccccc
Confidence 233456999999999999998888753 24999999999999964
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=6.6e-06 Score=73.61 Aligned_cols=131 Identities=15% Similarity=0.164 Sum_probs=102.8
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC------Cc----chhhhhhhhcccccHHHHHHHHhhcccCC-
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG------SF----GQRAETTLATNFFALVTVCHILFPLLRPH- 178 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~------~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~- 178 (313)
..+|..+.++++. +.+++|++|++|||||..... ++ .+.|+..+++|+.|++.+++.++|.|+++
T Consensus 48 ~~~Dls~~~~~~~----~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~ 123 (235)
T PRK09009 48 HALDVTDEAEIKQ----LSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE 123 (235)
T ss_pred EEecCCCHHHHHH----HHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC
Confidence 3456677777766 457789999999999997432 22 25688999999999999999999999764
Q ss_pred -CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhh
Q psy2266 179 -ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATL 257 (313)
Q Consensus 179 -g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l 257 (313)
++|+++||..+.... . ...+...|+++|+|+..|++.++.++
T Consensus 124 ~~~i~~iss~~~~~~~-----------------------------------~--~~~~~~~Y~asK~a~~~~~~~la~e~ 166 (235)
T PRK09009 124 SAKFAVISAKVGSISD-----------------------------------N--RLGGWYSYRASKAALNMFLKTLSIEW 166 (235)
T ss_pred CceEEEEeeccccccc-----------------------------------C--CCCCcchhhhhHHHHHHHHHHHHHHh
Confidence 789999987764311 0 01233569999999999999999998
Q ss_pred ccCCCCCCeEEEeecccccccccccc
Q psy2266 258 SKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 258 ~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.+. .++|+||+|+||+|+|++...
T Consensus 167 ~~~--~~~i~v~~v~PG~v~t~~~~~ 190 (235)
T PRK09009 167 QRS--LKHGVVLALHPGTTDTALSKP 190 (235)
T ss_pred hcc--cCCeEEEEEcccceecCCCcc
Confidence 753 248999999999999999764
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=7.1e-06 Score=74.77 Aligned_cols=70 Identities=13% Similarity=0.128 Sum_probs=62.7
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
..+|..+.+++.++++.+.+.+|++|+++||||.....++. +.|+.++++|+.|++.+++.++|.|++.+
T Consensus 62 ~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~ 135 (261)
T PRK08936 62 VKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHD 135 (261)
T ss_pred EEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 46688899999999999999999999999999987766653 68999999999999999999999998754
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=98.07 E-value=4.4e-05 Score=71.90 Aligned_cols=75 Identities=16% Similarity=0.178 Sum_probs=51.8
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.++.++.+|+++.+++.++++ .+|++||+||..... ..+.+...+++|+.++..+++++.... .-+++
T Consensus 56 ~~~~~~~~Dl~~~~~~~~~~~-------~~d~vih~A~~~~~~----~~~~~~~~~~~nv~gt~~ll~~~~~~~-~v~rv 123 (322)
T PLN02986 56 ERLKLFKADLLEESSFEQAIE-------GCDAVFHTASPVFFT----VKDPQTELIDPALKGTINVLNTCKETP-SVKRV 123 (322)
T ss_pred CceEEEecCCCCcchHHHHHh-------CCCEEEEeCCCcCCC----CCCchhhhhHHHHHHHHHHHHHHHhcC-CccEE
Confidence 357888999999988777665 489999999974321 112335678888999888888765421 12467
Q ss_pred EEEeccc
Q psy2266 89 VNVASKL 95 (313)
Q Consensus 89 V~isS~~ 95 (313)
|++||..
T Consensus 124 V~~SS~~ 130 (322)
T PLN02986 124 ILTSSTA 130 (322)
T ss_pred EEecchh
Confidence 7776654
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.06 E-value=7.6e-06 Score=74.42 Aligned_cols=70 Identities=10% Similarity=0.053 Sum_probs=62.0
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
..+|..+.++++++++.+.+.+|++|+++||||.....++ .++|+.++++|+.|++.++++++|.|++++
T Consensus 62 ~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 135 (253)
T PRK08993 62 LTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQG 135 (253)
T ss_pred EECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC
Confidence 3567789999999999999999999999999998766654 378999999999999999999999998643
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=6.8e-06 Score=78.58 Aligned_cols=92 Identities=24% Similarity=0.332 Sum_probs=72.2
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~ 152 (313)
+++.+|+.+++....+.+.. .++. ....+|..++++++++++.+.+.+|++|++|||||....+++. ++
T Consensus 29 ~~G~~Vvl~~R~~~~l~~~~-~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~ 107 (330)
T PRK06139 29 RRGARLVLAARDEEALQAVA-EECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEA 107 (330)
T ss_pred HCCCEEEEEECCHHHHHHHH-HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHH
Confidence 45778888776554433221 1111 1246688899999999999999999999999999988777663 68
Q ss_pred hhhhhhcccccHHHHHHHHhhcc
Q psy2266 153 AETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
|+.++++|+.|++.+++.++|.|
T Consensus 108 ~~~~~~vN~~g~~~~~~~~lp~~ 130 (330)
T PRK06139 108 HEQVIQTNLIGYMRDAHAALPIF 130 (330)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHH
Confidence 89999999999999999999976
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=6.6e-06 Score=76.97 Aligned_cols=90 Identities=16% Similarity=0.172 Sum_probs=69.1
Q ss_pred cCCceEEEEecccccccCCCchhhh-----hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR-----QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRA 153 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~ 153 (313)
++|.+|+.+++....+.... ..++ ....+|..+.++++++++.+.+.+|++|++|||||....+++ .++|
T Consensus 31 ~~G~~V~~~~r~~~~l~~~~-~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~ 109 (296)
T PRK05872 31 ARGAKLALVDLEEAELAALA-AELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAF 109 (296)
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHH
Confidence 45678777776544332211 1111 112378889999999999999999999999999999776665 3789
Q ss_pred hhhhhcccccHHHHHHHHhh
Q psy2266 154 ETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p 173 (313)
+.++++|+.|++.+++.++|
T Consensus 110 ~~~~~vn~~g~~~l~~~~~~ 129 (296)
T PRK05872 110 RRVIDVNLLGVFHTVRATLP 129 (296)
T ss_pred HHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999998
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=8.5e-06 Score=73.06 Aligned_cols=156 Identities=15% Similarity=0.115 Sum_probs=120.5
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhh---h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc-
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQEL---R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~---~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~- 149 (313)
++++..+ ++|.+|+.+++..... ...+ + +...+|..++++++++++.+.+.+|++|+++||||.....++
T Consensus 16 ~~ia~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~ 91 (236)
T PRK06483 16 LALAWHLLAQGQPVIVSYRTHYPA----IDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPG 91 (236)
T ss_pred HHHHHHHHHCCCeEEEEeCCchhH----HHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccCCCcC
Confidence 3444434 4577888776543221 1111 1 234678889999999999999999999999999998644432
Q ss_pred ---chhhhhhhhcccccHHHHHHHHhhcccC----CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHH
Q psy2266 150 ---GQRAETTLATNFFALVTVCHILFPLLRP----HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQ 222 (313)
Q Consensus 150 ---~~~~~~~~~~N~~g~~~~~~~~~p~l~~----~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (313)
.++|+.++++|+.+++.+++.++|.|++ .|+||++||..+..
T Consensus 92 ~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~------------------------------- 140 (236)
T PRK06483 92 APLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK------------------------------- 140 (236)
T ss_pred ccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc-------------------------------
Confidence 4789999999999999999999999965 36899999987654
Q ss_pred HhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 223 LAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 223 ~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
+..+..+|++||+|+..|++.++.++++ +||||+|+||+|.|+.
T Consensus 141 ---------~~~~~~~Y~asKaal~~l~~~~a~e~~~-----~irvn~v~Pg~~~~~~ 184 (236)
T PRK06483 141 ---------GSDKHIAYAASKAALDNMTLSFAAKLAP-----EVKVNSIAPALILFNE 184 (236)
T ss_pred ---------CCCCCccHHHHHHHHHHHHHHHHHHHCC-----CcEEEEEccCceecCC
Confidence 1233457999999999999999888753 4999999999998764
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=8.1e-06 Score=75.61 Aligned_cols=97 Identities=14% Similarity=0.192 Sum_probs=73.7
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
++|.+|+.+++....+.+. ..++. ....+|..+.+++..+++.+.+.+|++|++|||||....+++ .++
T Consensus 28 ~~G~~Vv~~~r~~~~l~~~-~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~ 106 (275)
T PRK05876 28 RRGARVVLGDVDKPGLRQA-VNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDD 106 (275)
T ss_pred HCCCEEEEEeCCHHHHHHH-HHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHH
Confidence 4566777666544333221 11111 113568889999999999999999999999999998766665 368
Q ss_pred hhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 153 AETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
|+.++++|+.|++.+++.++|.|.+.+.
T Consensus 107 ~~~~~~~N~~g~~~l~~~~~p~m~~~~~ 134 (275)
T PRK05876 107 WRWVIDVDLWGSIHTVEAFLPRLLEQGT 134 (275)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999987543
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.04 E-value=4.1e-05 Score=70.97 Aligned_cols=129 Identities=12% Similarity=0.018 Sum_probs=86.6
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLG 189 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~ 189 (313)
+.+|..+++++.++++.+ ++|+++++|+........+..+..+++|+.|+..+++.+...+. +.+++++||...
T Consensus 55 ~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~Ss~~v 128 (317)
T TIGR01181 55 VKGDIGDRELVSRLFTEH-----QPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWH-EFRFHHISTDEV 128 (317)
T ss_pred EEcCCcCHHHHHHHHhhc-----CCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCC-CceEEEeeccce
Confidence 346777888887776542 59999999997665555567778899999999999988876543 247999998653
Q ss_pred ccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEE
Q psy2266 190 MLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVN 269 (313)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn 269 (313)
.-....... .+ +. ....+...|+.+|.+.+.+++.++.+ .|+++.
T Consensus 129 ~g~~~~~~~---------~~------------------e~-~~~~~~~~Y~~sK~~~e~~~~~~~~~-------~~~~~~ 173 (317)
T TIGR01181 129 YGDLEKGDA---------FT------------------ET-TPLAPSSPYSASKAASDHLVRAYHRT-------YGLPAL 173 (317)
T ss_pred eCCCCCCCC---------cC------------------CC-CCCCCCCchHHHHHHHHHHHHHHHHH-------hCCCeE
Confidence 221000000 00 00 01223346999999999999655443 268888
Q ss_pred eecccccccc
Q psy2266 270 PVHPGYVNTD 279 (313)
Q Consensus 270 ~v~PG~v~T~ 279 (313)
.+.|+.+-.+
T Consensus 174 i~R~~~i~G~ 183 (317)
T TIGR01181 174 ITRCSNNYGP 183 (317)
T ss_pred EEEeccccCC
Confidence 8888877544
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.2e-05 Score=72.97 Aligned_cols=64 Identities=11% Similarity=0.097 Sum_probs=57.6
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+.+|..++++++++++.+.+.+|++|++|||||.....++ .++|+.++++|+.|++.+++.++|
T Consensus 63 ~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 130 (254)
T PRK06114 63 IAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEAR 130 (254)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHH
Confidence 4668889999999999999999999999999998766654 378999999999999999999988
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=8.7e-06 Score=75.83 Aligned_cols=68 Identities=12% Similarity=0.045 Sum_probs=61.1
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
..+|..++++++++++.+.+.+|++|+||||||.....++ .++|+.++++|+.|++.+++.++|.|++
T Consensus 69 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 140 (286)
T PRK07791 69 NGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRA 140 (286)
T ss_pred EeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 3568889999999999999999999999999998766654 3789999999999999999999999965
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=8.9e-06 Score=74.02 Aligned_cols=92 Identities=12% Similarity=0.108 Sum_probs=70.5
Q ss_pred cCCceEEEEecccccccCCCchhhh--------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----c
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR--------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----G 150 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~--------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~ 150 (313)
++|.+|+.+++......+.. ..+. ....+|..++++++++++.+.+++|++|+||||||....+++ .
T Consensus 29 ~~G~~vv~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~ 107 (260)
T PRK07063 29 REGAAVALADLDAALAERAA-AAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTD 107 (260)
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCH
Confidence 45778887776443322211 1111 124568889999999999999999999999999998655543 3
Q ss_pred hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 151 QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
++|+.++++|+.|++.++++++|.|
T Consensus 108 ~~~~~~~~~n~~~~~~~~~~~~~~~ 132 (260)
T PRK07063 108 EDWRRCFAVDLDGAWNGCRAVLPGM 132 (260)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 7899999999999999999999977
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.02 E-value=8.7e-06 Score=74.80 Aligned_cols=98 Identities=14% Similarity=0.202 Sum_probs=73.8
Q ss_pred HHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----ch
Q psy2266 77 ILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQ 151 (313)
Q Consensus 77 a~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~ 151 (313)
+++..+ ++|.+|+.+++....+.+..... -....+|..+.++++++++.+.+.+|++|++|||||....+++ .+
T Consensus 18 ~la~~l~~~G~~V~~~~r~~~~l~~~~~~~-~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~ 96 (273)
T PRK06182 18 ATARRLAAQGYTVYGAARRVDKMEDLASLG-VHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPID 96 (273)
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHHHhCC-CeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHH
Confidence 333333 45677877776544332221111 1234668889999999999999999999999999998877765 36
Q ss_pred hhhhhhhcccccHHHHHHHHhhcc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+|+.++++|+.|.+.+++.++|.|
T Consensus 97 ~~~~~~~~n~~~~~~~~~~~l~~~ 120 (273)
T PRK06182 97 EARRQFEVNLFGAARLTQLVLPHM 120 (273)
T ss_pred HHHHHHhHHhHHHHHHHHHHHHHH
Confidence 899999999999999999999977
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.6e-05 Score=72.16 Aligned_cols=99 Identities=15% Similarity=0.124 Sum_probs=73.8
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF---- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~---- 149 (313)
++++..+ +++.+++.+++..... . ...+ ....+|..++++++++++.+.+.+|++|++|||||.....++
T Consensus 20 ~~la~~l~~~g~~v~~~~r~~~~~--~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~ 95 (252)
T PRK07856 20 AGIARAFLAAGATVVVCGRRAPET--V--DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEAS 95 (252)
T ss_pred HHHHHHHHHCCCEEEEEeCChhhh--h--cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCC
Confidence 3333333 4567888776654320 0 1111 234568889999999999999999999999999998655544
Q ss_pred chhhhhhhhcccccHHHHHHHHhhcccCC
Q psy2266 150 GQRAETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 150 ~~~~~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
.+.|+.++++|+.|++.+++.+.|.|+++
T Consensus 96 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 124 (252)
T PRK07856 96 PRFHEKIVELNLLAPLLVAQAANAVMQQQ 124 (252)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 36789999999999999999999999764
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.01 E-value=9.6e-06 Score=74.72 Aligned_cols=96 Identities=15% Similarity=0.198 Sum_probs=70.4
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-C
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-G 147 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~ 147 (313)
++++..+ ++|.+|+.+++. ....+. ...+. ..+.+|..++++++++++.+.+.+|++|+||||||.... .
T Consensus 20 ~aia~~l~~~G~~vi~~~r~-~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~ 97 (272)
T PRK08589 20 QASAIALAQEGAYVLAVDIA-EAVSET-VDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAG 97 (272)
T ss_pred HHHHHHHHHCCCEEEEEeCc-HHHHHH-HHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCC
Confidence 3344333 457788887765 222211 11111 224678889999999999999999999999999998643 3
Q ss_pred Cc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 148 SF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 148 ~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++ .+.|+.++++|+.|++.+++.++|
T Consensus 98 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 127 (272)
T PRK08589 98 RIHEYPVDVFDKIMAVDMRGTFLMTKMLLP 127 (272)
T ss_pred CcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 43 367999999999999999999998
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.1e-05 Score=73.16 Aligned_cols=92 Identities=24% Similarity=0.186 Sum_probs=69.9
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~~~----~~ 151 (313)
++|.+++.+++......... ..+. ....+|..++++++++++.+.+.+|++|+||||||... .+++ .+
T Consensus 28 ~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~ 106 (254)
T PRK07478 28 REGAKVVVGARRQAELDQLV-AEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLE 106 (254)
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHH
Confidence 45778888776543322221 1111 12457888999999999999999999999999999864 3444 36
Q ss_pred hhhhhhhcccccHHHHHHHHhhcc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+|+.++++|+.|++.+++.++|.|
T Consensus 107 ~~~~~~~~N~~~~~~~~~~~~~~l 130 (254)
T PRK07478 107 GWRETLATNLTSAFLGAKHQIPAM 130 (254)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHH
Confidence 899999999999999999999966
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.1e-05 Score=73.06 Aligned_cols=96 Identities=10% Similarity=0.068 Sum_probs=72.8
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
+++.+++.+++......... .++. ....+|..++++++++++.+.+++|++|++++|||.....++ .++
T Consensus 24 ~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~ 102 (256)
T PRK08643 24 EDGFKVAIVDYNEETAQAAA-DKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQ 102 (256)
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHH
Confidence 45678877776543322211 1111 124568889999999999999999999999999998665554 368
Q ss_pred hhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 153 AETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
|+.++++|+.|++.+++.++|.|++.+
T Consensus 103 ~~~~~~~n~~~~~~~~~~~~~~~~~~~ 129 (256)
T PRK08643 103 FDKVYNINVGGVIWGIQAAQEAFKKLG 129 (256)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 899999999999999999999997643
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.1e-05 Score=74.03 Aligned_cols=69 Identities=10% Similarity=0.036 Sum_probs=55.6
Q ss_pred hcccCCCHHHH----HHHHHHHHHHcCCccEEEeccCcCCCCCcc---------------hhhhhhhhcccccHHHHHHH
Q psy2266 110 LFNESLTEDQL----LDMMTDYVQYNGPLDKILDTAMDTAPGSFG---------------QRAETTLATNFFALVTVCHI 170 (313)
Q Consensus 110 ~~~d~~~~~~~----~~~~~~~~~~~G~lD~Linna~~~~~~~~~---------------~~~~~~~~~N~~g~~~~~~~ 170 (313)
..+|..|.+++ +++++.+.+.+|++|+||||||...+.++. +.|..++++|+.|++.++++
T Consensus 57 ~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~ 136 (267)
T TIGR02685 57 CQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKA 136 (267)
T ss_pred EEccCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHH
Confidence 56788888754 666777778899999999999986555441 14788999999999999999
Q ss_pred HhhcccCC
Q psy2266 171 LFPLLRPH 178 (313)
Q Consensus 171 ~~p~l~~~ 178 (313)
++|.|++.
T Consensus 137 ~~~~~~~~ 144 (267)
T TIGR02685 137 FAQRQAGT 144 (267)
T ss_pred HHHHhhhc
Confidence 99998653
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.1e-05 Score=73.73 Aligned_cols=98 Identities=13% Similarity=0.090 Sum_probs=70.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCch-hh-hhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc---
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQ-EL-RQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF--- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~-~~-~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~--- 149 (313)
++++..+ ++|.+|+.+++......+.... +. .....+|..++++++++++.+.+.+|++|+++||||.....++
T Consensus 20 ~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~ 99 (261)
T PRK08265 20 AAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASS 99 (261)
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCC
Confidence 3444433 4567877776654322221111 00 1234678889999999999999999999999999998644333
Q ss_pred chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 ~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.++|+..+++|+.|++.+++.++|
T Consensus 100 ~~~~~~~~~~n~~~~~~~~~~~~~ 123 (261)
T PRK08265 100 RADWLAALDVNLVSAAMLAQAAHP 123 (261)
T ss_pred HHHHHHHHhHhhHHHHHHHHHHHH
Confidence 478999999999999999999988
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=97.99 E-value=8.2e-06 Score=76.81 Aligned_cols=163 Identities=17% Similarity=0.154 Sum_probs=111.3
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC-Cc----chhhhhhhhcccccHHHHHHHHhhcccC----CCc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG-SF----GQRAETTLATNFFALVTVCHILFPLLRP----HAR 180 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~-~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~----~g~ 180 (313)
..+|..+.++++++++.+.+.+|++|+||||||..... ++ .++|+.+|++|+.|++.+++.++|.|++ +|+
T Consensus 52 ~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~ 131 (308)
T PLN00015 52 MHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKR 131 (308)
T ss_pred EEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCE
Confidence 46688899999999999999999999999999985432 32 4789999999999999999999999954 379
Q ss_pred eEEecCCccccccccChhhhhhhhccccchHHHHHHHHHH--H-HHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhh
Q psy2266 181 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDY--V-QLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATL 257 (313)
Q Consensus 181 iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l 257 (313)
||++||..+......+.. . ...+.+++.....++ . ..... +...+.+..+|++||+|+..+++.+++++
T Consensus 132 IV~vsS~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~aY~~SK~a~~~~~~~la~~~ 203 (308)
T PLN00015 132 LIIVGSITGNTNTLAGNV----P--PKANLGDLRGLAGGLNGLNSSAMI--DGGEFDGAKAYKDSKVCNMLTMQEFHRRY 203 (308)
T ss_pred EEEEeccccccccccccC----C--CccchhhhhhhhcccCCccchhhc--cccCCcHHHHHhHhHHHHHHHHHHHHHhh
Confidence 999999987531100000 0 000000000000000 0 00000 00112344679999999898898888887
Q ss_pred ccCCCCCCeEEEeeccccc-ccccccc
Q psy2266 258 SKDKRRPDIIVNPVHPGYV-NTDLTEH 283 (313)
Q Consensus 258 ~~~~~~~gI~vn~v~PG~v-~T~~~~~ 283 (313)
.++ .||+||+|+||+| .|+|.+.
T Consensus 204 ~~~---~gi~v~~v~PG~v~~t~~~~~ 227 (308)
T PLN00015 204 HEE---TGITFASLYPGCIATTGLFRE 227 (308)
T ss_pred ccc---CCeEEEEecCCcccCcccccc
Confidence 541 3899999999999 7998654
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=3.8e-05 Score=73.26 Aligned_cols=128 Identities=14% Similarity=0.025 Sum_probs=82.4
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcc---c---CC-CceEE
Q psy2266 111 FNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLL---R---PH-ARVVN 183 (313)
Q Consensus 111 ~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l---~---~~-g~iv~ 183 (313)
.+|..+.++++++++. .++|+++|+||........+.++..+++|+.|+..+++++.+.| . ++ .++|+
T Consensus 57 ~~Dl~d~~~~~~~~~~-----~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~ 131 (355)
T PRK10217 57 KVDICDRAELARVFTE-----HQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHH 131 (355)
T ss_pred ECCCcChHHHHHHHhh-----cCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEE
Confidence 4577788877776654 36999999999765433345678899999999999999998753 1 12 48899
Q ss_pred ecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCC
Q psy2266 184 VASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRR 263 (313)
Q Consensus 184 vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~ 263 (313)
+||.+..-.. .... ..+++ + ....+...|+.||.+.+.+++.++++.
T Consensus 132 ~SS~~vyg~~-~~~~-------~~~~E-----------------~--~~~~p~s~Y~~sK~~~e~~~~~~~~~~------ 178 (355)
T PRK10217 132 ISTDEVYGDL-HSTD-------DFFTE-----------------T--TPYAPSSPYSASKASSDHLVRAWLRTY------ 178 (355)
T ss_pred ecchhhcCCC-CCCC-------CCcCC-----------------C--CCCCCCChhHHHHHHHHHHHHHHHHHh------
Confidence 9987542210 0000 00000 0 012344569999999999997765553
Q ss_pred CCeEEEeecccccc
Q psy2266 264 PDIIVNPVHPGYVN 277 (313)
Q Consensus 264 ~gI~vn~v~PG~v~ 277 (313)
|+++..+.|+.|-
T Consensus 179 -~~~~~i~r~~~v~ 191 (355)
T PRK10217 179 -GLPTLITNCSNNY 191 (355)
T ss_pred -CCCeEEEeeeeee
Confidence 4555555565543
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.6e-05 Score=72.39 Aligned_cols=70 Identities=9% Similarity=0.023 Sum_probs=62.3
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
..+|..+.++++.+++.+.+.+|++|++++|||.....++ .++|+.++++|+.|++.+++++.|.|.+++
T Consensus 57 ~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 130 (256)
T PRK12743 57 RQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQG 130 (256)
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 4578889999999999999999999999999998765544 378999999999999999999999998765
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.0001 Score=70.20 Aligned_cols=78 Identities=15% Similarity=0.159 Sum_probs=54.2
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhc-ccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPL-LRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~-m~~~g~ 87 (313)
.++.++++|++|.+++.++++.+ ++|++||+|+........ +.-...+++|+.++..+++++.+. +++..+
T Consensus 55 ~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~ViH~Aa~~~~~~~~---~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~ 126 (343)
T TIGR01472 55 ARMKLHYGDLTDSSNLRRIIDEI-----KPTEIYNLAAQSHVKVSF---EIPEYTADVDGIGTLRLLEAVRTLGLIKSVK 126 (343)
T ss_pred cceeEEEeccCCHHHHHHHHHhC-----CCCEEEECCcccccchhh---hChHHHHHHHHHHHHHHHHHHHHhCCCcCee
Confidence 35788899999999888877753 489999999986532111 122456678999999999988763 222235
Q ss_pred EEEEecc
Q psy2266 88 VVNVASK 94 (313)
Q Consensus 88 IV~isS~ 94 (313)
+|++||.
T Consensus 127 ~v~~SS~ 133 (343)
T TIGR01472 127 FYQASTS 133 (343)
T ss_pred EEEeccH
Confidence 6666653
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.5e-05 Score=72.62 Aligned_cols=103 Identities=14% Similarity=0.051 Sum_probs=73.4
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCch----hhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC--CCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQ----ELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA--PGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~--~~~ 148 (313)
++++..+ ++|.+++.+++....+.+...+ +..+...+|..+.++++++++.+.+.+|++|+||||||... +.+
T Consensus 14 ~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~ 93 (259)
T PRK08340 14 FNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCM 93 (259)
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccc
Confidence 3444433 4577887777654332221110 11122466888999999999999999999999999999753 223
Q ss_pred c----chhhhhhhhcccccHHHHHHHHhhcccCC
Q psy2266 149 F----GQRAETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 149 ~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
+ .++|...+.+|+.+++.+++.++|.|.+.
T Consensus 94 ~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~ 127 (259)
T PRK08340 94 LHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEK 127 (259)
T ss_pred cccccHHHHHHHHhhcchHHHHHHHHHHHHHHhc
Confidence 3 36788899999999999999999988754
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=1.2e-05 Score=74.03 Aligned_cols=96 Identities=14% Similarity=0.141 Sum_probs=72.5
Q ss_pred cCCceEEEEecccccccCCCchhhh-------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR-------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~-------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~ 151 (313)
+++..++.+++........ .+++. ....+|..+++++.++++.+.+.+|++|+++||||....+++ .+
T Consensus 22 ~~G~~vv~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~ 100 (272)
T PRK07832 22 AQGAELFLTDRDADGLAQT-VADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHE 100 (272)
T ss_pred HCCCEEEEEeCCHHHHHHH-HHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHH
Confidence 3567777776544332211 11111 113578889999999999999999999999999998765554 36
Q ss_pred hhhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 152 RAETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
+|+.++++|+.|++.++++++|.|.+.+
T Consensus 101 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 128 (272)
T PRK07832 101 QWRRMVDVNLMGPIHVIETFVPPMVAAG 128 (272)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence 8899999999999999999999998653
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.4e-05 Score=72.05 Aligned_cols=104 Identities=12% Similarity=0.095 Sum_probs=75.7
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCch----hh-hhhhcccCCCHHHHHHHHHHHHHHcC-CccEEEeccCcCC-CC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQ----EL-RQTLFNESLTEDQLLDMMTDYVQYNG-PLDKILDTAMDTA-PG 147 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~----~~-~~~~~~d~~~~~~~~~~~~~~~~~~G-~lD~Linna~~~~-~~ 147 (313)
++++..+ ++|.+|+.+++....+.+.... +. ...+.+|+.++++++++++.+.+++| ++|+++||||... +.
T Consensus 19 ~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~ 98 (227)
T PRK08862 19 RTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPS 98 (227)
T ss_pred HHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCC
Confidence 3444333 4577888877655443222111 00 12245788899999999999999999 9999999998643 33
Q ss_pred Ccc----hhhhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 148 SFG----QRAETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 148 ~~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
++. ++|.+++++|+.+++.+++.++|+|++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~ 134 (227)
T PRK08862 99 LFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRN 134 (227)
T ss_pred ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 442 57888999999999999999999998765
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.5e-05 Score=73.07 Aligned_cols=92 Identities=15% Similarity=0.126 Sum_probs=69.4
Q ss_pred cCCceEEEEecccccccCCCchhh--hhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL--RQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETT 156 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~ 156 (313)
+++.+++.+++......... ..+ -....+|..++++++++++.+.+.+|++|++|||||....+++. +.++.+
T Consensus 27 ~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~ 105 (273)
T PRK07825 27 ALGARVAIGDLDEALAKETA-AELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRI 105 (273)
T ss_pred HCCCEEEEEECCHHHHHHHH-HHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHH
Confidence 44667666655433222111 111 12346688899999999999999999999999999987766653 578999
Q ss_pred hhcccccHHHHHHHHhhcc
Q psy2266 157 LATNFFALVTVCHILFPLL 175 (313)
Q Consensus 157 ~~~N~~g~~~~~~~~~p~l 175 (313)
+++|+.|++.+++.++|.|
T Consensus 106 ~~~n~~g~~~~~~~~~~~~ 124 (273)
T PRK07825 106 LDVNVYGVILGSKLAAPRM 124 (273)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999966
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=2.3e-05 Score=72.32 Aligned_cols=97 Identities=13% Similarity=0.107 Sum_probs=72.9
Q ss_pred cCCceEEEEecccccccCCCch----hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQ----ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRA 153 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~----~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~ 153 (313)
++|.+++.++.......+.... +.+ ....+|..+.++++++++.+.+.+|++|+++||||....+++. ++|
T Consensus 28 ~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~ 107 (287)
T PRK06194 28 ALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADW 107 (287)
T ss_pred HCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHH
Confidence 4567777776543322221111 001 1145688899999999999999999999999999998776643 788
Q ss_pred hhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
+.++++|+.|++.+++.++|.|++.+
T Consensus 108 ~~~~~~N~~g~~~~~~~~~~~~~~~~ 133 (287)
T PRK06194 108 EWVLGVNLWGVIHGVRAFTPLMLAAA 133 (287)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999987643
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00015 Score=68.87 Aligned_cols=74 Identities=15% Similarity=0.116 Sum_probs=51.1
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
++.++.+|++|.+++.++++ ++|++||+||..... ..+.+...+++|+.++..+++++.+.. ..+++|
T Consensus 60 ~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~~~----~~~~~~~~~~~nv~g~~~ll~a~~~~~-~~~~~v 127 (338)
T PLN00198 60 DLKIFGADLTDEESFEAPIA-------GCDLVFHVATPVNFA----SEDPENDMIKPAIQGVHNVLKACAKAK-SVKRVI 127 (338)
T ss_pred ceEEEEcCCCChHHHHHHHh-------cCCEEEEeCCCCccC----CCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEE
Confidence 46788999999888776553 589999999853211 113345567889999999888876642 224677
Q ss_pred EEeccc
Q psy2266 90 NVASKL 95 (313)
Q Consensus 90 ~isS~~ 95 (313)
++||..
T Consensus 128 ~~SS~~ 133 (338)
T PLN00198 128 LTSSAA 133 (338)
T ss_pred Eeecce
Confidence 776644
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=1.9e-05 Score=71.67 Aligned_cols=97 Identities=13% Similarity=0.060 Sum_probs=73.7
Q ss_pred cCCceEEEEecccccccCCCchh--hhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQE--LRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETT 156 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~ 156 (313)
++|.+|+.+.+............ .-....+|..++++++++++.+.+.+|++|++++|||.....++ .++|+.+
T Consensus 28 ~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~ 107 (257)
T PRK07067 28 AEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRL 107 (257)
T ss_pred HcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHH
Confidence 45678887766544332211110 01224668889999999999999999999999999998766665 3689999
Q ss_pred hhcccccHHHHHHHHhhcccCCC
Q psy2266 157 LATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 157 ~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
+++|+.|++.++++++|.|.+++
T Consensus 108 ~~~n~~~~~~l~~~~~~~~~~~~ 130 (257)
T PRK07067 108 FAVNVKGLFFLMQAVARHMVEQG 130 (257)
T ss_pred HHhhhhhHHHHHHHHHHHHHhcC
Confidence 99999999999999999998654
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=1.8e-05 Score=75.63 Aligned_cols=92 Identities=18% Similarity=0.220 Sum_probs=71.8
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
++|.+|+.+++....+.+.. .++. ....+|..+.++++++++.+.+++|++|++|||||....+++ .++
T Consensus 30 ~~G~~Vvl~~R~~~~l~~~~-~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~ 108 (334)
T PRK07109 30 RRGAKVVLLARGEEGLEALA-AEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEE 108 (334)
T ss_pred HCCCEEEEEECCHHHHHHHH-HHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHH
Confidence 45778888876544332221 1111 124578889999999999999999999999999998766665 378
Q ss_pred hhhhhhcccccHHHHHHHHhhcc
Q psy2266 153 AETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
|+.++++|+.|.+.+++.++|.|
T Consensus 109 ~~~~~~vN~~g~~~~~~~~l~~~ 131 (334)
T PRK07109 109 FRRVTEVTYLGVVHGTLAALRHM 131 (334)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHH
Confidence 99999999999999999999977
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00017 Score=68.80 Aligned_cols=73 Identities=11% Similarity=0.073 Sum_probs=50.8
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
++.++.+|++|.++++++++ .+|.+||+|+..... . .+.+...+++|+.+++.+++++.+... ..++|
T Consensus 57 ~~~~v~~Dl~d~~~~~~~~~-------~~d~ViH~A~~~~~~---~-~~~~~~~~~~Nv~gt~~ll~aa~~~~~-~~r~v 124 (351)
T PLN02650 57 RLTLWKADLAVEGSFDDAIR-------GCTGVFHVATPMDFE---S-KDPENEVIKPTVNGMLSIMKACAKAKT-VRRIV 124 (351)
T ss_pred ceEEEEecCCChhhHHHHHh-------CCCEEEEeCCCCCCC---C-CCchhhhhhHHHHHHHHHHHHHHhcCC-ceEEE
Confidence 46778999999888777654 489999999864321 1 122356678889999888888766421 24677
Q ss_pred EEecc
Q psy2266 90 NVASK 94 (313)
Q Consensus 90 ~isS~ 94 (313)
++||.
T Consensus 125 ~~SS~ 129 (351)
T PLN02650 125 FTSSA 129 (351)
T ss_pred Eecch
Confidence 77664
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=1.8e-05 Score=71.89 Aligned_cols=104 Identities=14% Similarity=0.070 Sum_probs=74.9
Q ss_pred HHHHhcccCCceEEEEecccccccCCCch----hh--hhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc
Q psy2266 76 HILFPLLRPHARVVNVASKLGMLYNVPSQ----EL--RQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF 149 (313)
Q Consensus 76 ra~~~~m~~~g~IV~isS~~~~~~~~~~~----~~--~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~ 149 (313)
++++..+.++.+++.+++....+.+...+ +. -....+|..|+++++++++.+.+.+|++|+++||||.....+.
T Consensus 14 ~aia~~l~~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~ 93 (246)
T PRK05599 14 GEIATLLCHGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQER 93 (246)
T ss_pred HHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchh
Confidence 33444344577888877654443322111 00 1234668889999999999999999999999999998754433
Q ss_pred ----chhhhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 150 ----GQRAETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 150 ----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
.+.+..++++|+.+.+.+++.++|.|++++
T Consensus 94 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~ 127 (246)
T PRK05599 94 AETDEAHAVEIATVDYTAQVSMLTVLADELRAQT 127 (246)
T ss_pred hhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcC
Confidence 245678899999999999999999998654
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=97.89 E-value=2.3e-05 Score=70.78 Aligned_cols=96 Identities=8% Similarity=0.047 Sum_probs=73.0
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
+.+.+++.+.+......+.. ..+. ....+|..+++++.++++.+.+++|++|+++||||....+++ .++
T Consensus 22 ~~G~~v~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~ 100 (254)
T TIGR02415 22 KDGFAVAVADLNEETAKETA-KEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEE 100 (254)
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHH
Confidence 45667777766533221111 1111 124568889999999999999999999999999998766654 368
Q ss_pred hhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 153 AETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
|+.++++|+.|++.+++.++|.|++.+
T Consensus 101 ~~~~~~~n~~~~~~~~~~~~~~~~~~~ 127 (254)
T TIGR02415 101 LKKVYNVNVKGVLFGIQAAARQFKKQG 127 (254)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhCC
Confidence 899999999999999999999998754
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00018 Score=71.58 Aligned_cols=79 Identities=14% Similarity=0.093 Sum_probs=53.8
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.++.+|++|.++++++++.. ++|+|||+|+.... ...... +++...+++|+.+++.+++++...-. ..++
T Consensus 114 ~v~~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~~-~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv-~~~~ 186 (442)
T PLN02572 114 EIELYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRSA-PYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP-DCHL 186 (442)
T ss_pred cceEEECCCCCHHHHHHHHHhC-----CCCEEEECCCcccC-hhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC-CccE
Confidence 5778899999999888877752 69999999976432 222222 45667788899999888887654311 1356
Q ss_pred EEEeccc
Q psy2266 89 VNVASKL 95 (313)
Q Consensus 89 V~isS~~ 95 (313)
|++||..
T Consensus 187 V~~SS~~ 193 (442)
T PLN02572 187 VKLGTMG 193 (442)
T ss_pred EEEecce
Confidence 6666543
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=4.9e-05 Score=69.51 Aligned_cols=90 Identities=14% Similarity=0.221 Sum_probs=70.7
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLA 158 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~ 158 (313)
+++.+|+.+++........ ...+.+.+|..++++++.+++.+.+.+|++|+++||||....+++. ++++.+++
T Consensus 26 ~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~ 102 (270)
T PRK06179 26 RAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFD 102 (270)
T ss_pred HCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHH
Confidence 4466777777654332221 1123356788899999999999999999999999999987766653 67899999
Q ss_pred cccccHHHHHHHHhhcc
Q psy2266 159 TNFFALVTVCHILFPLL 175 (313)
Q Consensus 159 ~N~~g~~~~~~~~~p~l 175 (313)
+|+.|++.+++.++|.|
T Consensus 103 ~n~~g~~~~~~~~~~~~ 119 (270)
T PRK06179 103 TNVFGILRMTRAVLPHM 119 (270)
T ss_pred HHhHHHHHHHHHHHHHH
Confidence 99999999999999976
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=2.1e-05 Score=72.28 Aligned_cols=92 Identities=23% Similarity=0.240 Sum_probs=69.5
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLA 158 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~ 158 (313)
++|..|+.+++............ .....+|..+.++++++++.+.+.+|++|++|||||....+++ .++|+.+++
T Consensus 23 ~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~ 101 (274)
T PRK05693 23 AAGYEVWATARKAEDVEALAAAG-FTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFE 101 (274)
T ss_pred HCCCEEEEEeCCHHHHHHHHHCC-CeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 44677777765443322111111 1234578889999999999999999999999999998665554 378899999
Q ss_pred cccccHHHHHHHHhhcc
Q psy2266 159 TNFFALVTVCHILFPLL 175 (313)
Q Consensus 159 ~N~~g~~~~~~~~~p~l 175 (313)
+|+.|++.+++.++|.|
T Consensus 102 ~N~~g~~~l~~~~~~~~ 118 (274)
T PRK05693 102 TNVFAVVGVTRALFPLL 118 (274)
T ss_pred HHhHHHHHHHHHHHHHH
Confidence 99999999999999976
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00031 Score=67.21 Aligned_cols=79 Identities=14% Similarity=0.139 Sum_probs=52.4
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC-C--CChhHHH-HHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA-P--GSFGQRA-ETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~-~--~~~~~~~-~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.++.++.+|+++.+++.++++ .+|++||+||...... . .+..+.+ .+.++.|+.+++.+++++.+.. .
T Consensus 58 ~~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~ 129 (353)
T PLN02896 58 DRLRLFRADLQEEGSFDEAVK-------GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-T 129 (353)
T ss_pred CeEEEEECCCCCHHHHHHHHc-------CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-C
Confidence 457788999999988777653 4899999999865331 1 1122222 4567778888888888776542 1
Q ss_pred CceEEEEeccc
Q psy2266 85 HARVVNVASKL 95 (313)
Q Consensus 85 ~g~IV~isS~~ 95 (313)
.+++|++||..
T Consensus 130 ~~~~v~~SS~~ 140 (353)
T PLN02896 130 VKRVVFTSSIS 140 (353)
T ss_pred ccEEEEEechh
Confidence 24666666643
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=6.7e-05 Score=68.44 Aligned_cols=62 Identities=16% Similarity=0.121 Sum_probs=44.6
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
+++.+++.++......... .-....+|..++++++++++.+.+.+|++|+++||||...+.+
T Consensus 31 ~~G~~v~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~ 92 (266)
T PRK06171 31 ANGANVVNADIHGGDGQHE----NYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRL 92 (266)
T ss_pred HCCCEEEEEeCCccccccC----ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCcc
Confidence 4567777766544332111 1123457888999999999999999999999999999865443
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.83 E-value=2.4e-05 Score=73.97 Aligned_cols=193 Identities=17% Similarity=0.163 Sum_probs=121.0
Q ss_pred cCCceEEEEecccccccCCCc----hhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC-----Ccchh
Q psy2266 83 RPHARVVNVASKLGMLYNVPS----QELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG-----SFGQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~----~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~-----~~~~~ 152 (313)
+.|..|+.+++......+... .... ..+.+|..+.++++++++.+.+.++++|+||||||..... ...++
T Consensus 28 ~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~ 107 (322)
T PRK07453 28 KRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQG 107 (322)
T ss_pred HCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHH
Confidence 456788877654433211100 0001 1245688899999999999888888999999999976432 13478
Q ss_pred hhhhhhcccccHHHHHHHHhhcccCC----CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcc
Q psy2266 153 AETTLATNFFALVTVCHILFPLLRPH----ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGK 228 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l~~~----g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (313)
|+.++++|+.|++.+++.++|.|++. ++||++||..+......+. . ... ...+.+++.....+. +....-.
T Consensus 108 ~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~-~--~~~-~~~~~~~~~~~~~~~-~~~~~~~ 182 (322)
T PRK07453 108 YELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGK-I--PIP-APADLGDLSGFEAGF-KAPISMA 182 (322)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCc-c--CCC-Cccchhhhhcchhcc-ccccccc
Confidence 99999999999999999999999653 5999999987642110000 0 000 000000000000000 0000000
Q ss_pred cccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccc-ccccccc
Q psy2266 229 DKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYV-NTDLTEH 283 (313)
Q Consensus 229 ~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v-~T~~~~~ 283 (313)
....+.+..+|+.||+++..+++.+++++.. .+||+|++|+||+| .|++.++
T Consensus 183 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~---~~gi~v~~v~PG~v~~t~~~~~ 235 (322)
T PRK07453 183 DGKKFKPGKAYKDSKLCNMLTMRELHRRYHE---STGITFSSLYPGCVADTPLFRN 235 (322)
T ss_pred CccCCCccchhhHhHHHHHHHHHHHHHhhcc---cCCeEEEEecCCcccCCccccc
Confidence 0112334567999999999999888877642 24899999999999 5998765
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=2.7e-05 Score=71.92 Aligned_cols=92 Identities=13% Similarity=0.263 Sum_probs=70.0
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHc-CCccEEEeccCcCCCCCcc----hhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYN-GPLDKILDTAMDTAPGSFG----QRAETTL 157 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-G~lD~Linna~~~~~~~~~----~~~~~~~ 157 (313)
++|.+|+.+++....+...... ......+|..+.++++.+++.+.+.+ |++|+++||||....+++. ++|+.++
T Consensus 26 ~~G~~Vi~~~r~~~~~~~l~~~-~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~ 104 (277)
T PRK05993 26 SDGWRVFATCRKEEDVAALEAE-GLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQF 104 (277)
T ss_pred HCCCEEEEEECCHHHHHHHHHC-CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHH
Confidence 4577888777654333221111 11234678889999999999998877 6999999999987777653 6789999
Q ss_pred hcccccHHHHHHHHhhcc
Q psy2266 158 ATNFFALVTVCHILFPLL 175 (313)
Q Consensus 158 ~~N~~g~~~~~~~~~p~l 175 (313)
++|+.|++.+++.++|.|
T Consensus 105 ~~N~~g~~~~~~~~l~~~ 122 (277)
T PRK05993 105 EANFFGWHDLTRRVIPVM 122 (277)
T ss_pred hHHhHHHHHHHHHHHHHH
Confidence 999999999999999977
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=2.6e-05 Score=73.50 Aligned_cols=168 Identities=18% Similarity=0.173 Sum_probs=122.0
Q ss_pred cCCceEEEEecccccccCCCchhh--hhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC--Ccchhhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL--RQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG--SFGQRAETTLA 158 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~--~~~~~~~~~~~ 158 (313)
+.|.+|+.+++......+.. .++ -....+|..+.++++++++.+.+++|++|+||||||..... ...++|+..++
T Consensus 48 ~~G~~Vv~~~R~~~~~~~~~-~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~ 126 (315)
T PRK06196 48 QAGAHVIVPARRPDVAREAL-AGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFA 126 (315)
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHH
Confidence 45678887776543322211 111 12346788899999999999999999999999999975432 12478999999
Q ss_pred cccccHHHHHHHHhhcccCC--CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCC
Q psy2266 159 TNFFALVTVCHILFPLLRPH--ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPE 236 (313)
Q Consensus 159 ~N~~g~~~~~~~~~p~l~~~--g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
+|+.|++.++++++|.|++. ++||++||..+........+ . +......+.
T Consensus 127 vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~---------~-------------------~~~~~~~~~ 178 (315)
T PRK06196 127 TNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDD---------P-------------------HFTRGYDKW 178 (315)
T ss_pred HhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccc---------c-------------------CccCCCChH
Confidence 99999999999999999654 79999999865331111000 0 000112233
Q ss_pred CchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 237 FSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 237 ~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.+|+.||+++..+++.+++++... ||+||+|+||+|.|++.+.
T Consensus 179 ~~Y~~SK~a~~~~~~~la~~~~~~----gi~v~~v~PG~v~t~~~~~ 221 (315)
T PRK06196 179 LAYGQSKTANALFAVHLDKLGKDQ----GVRAFSVHPGGILTPLQRH 221 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC----CcEEEEeeCCcccCCcccc
Confidence 569999999999998888877654 9999999999999998654
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=3.3e-05 Score=70.33 Aligned_cols=91 Identities=18% Similarity=0.182 Sum_probs=67.8
Q ss_pred cCCceEEEEecccccccCC----CchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc-----chhh
Q psy2266 83 RPHARVVNVASKLGMLYNV----PSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF-----GQRA 153 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~-----~~~~ 153 (313)
++|.+++.+++......+. +..+.-..+.+|..+++++.++++.+.+++|.+|+++||||......+ .++|
T Consensus 24 ~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~ 103 (257)
T PRK07024 24 RQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVF 103 (257)
T ss_pred HCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHH
Confidence 4567888877654332211 111111234678889999999999999999999999999998654322 2678
Q ss_pred hhhhhcccccHHHHHHHHhh
Q psy2266 154 ETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p 173 (313)
+.++++|+.|++.+++.++|
T Consensus 104 ~~~~~~n~~g~~~l~~~~l~ 123 (257)
T PRK07024 104 REVMDTNYFGMVATFQPFIA 123 (257)
T ss_pred HHHHhHhcHHHHHHHHHHHH
Confidence 99999999999999999998
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=4e-05 Score=69.46 Aligned_cols=90 Identities=14% Similarity=0.088 Sum_probs=68.4
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
++|.++|.+++........ .+++. ....+|..+.++++++++.+.+.+|++|+++||||.....++ .++
T Consensus 31 ~~G~~vvl~~r~~~~~~~~-~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~ 109 (254)
T PRK08085 31 EYGAEIIINDITAERAELA-VAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQE 109 (254)
T ss_pred HcCCEEEEEcCCHHHHHHH-HHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHH
Confidence 4567888776654332222 11111 123567889999999999999999999999999998765554 378
Q ss_pred hhhhhhcccccHHHHHHHHhh
Q psy2266 153 AETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p 173 (313)
|+.++++|+.|++.+++.++|
T Consensus 110 ~~~~~~~n~~~~~~l~~~~~~ 130 (254)
T PRK08085 110 WNDVIAVNQTAVFLVSQAVAR 130 (254)
T ss_pred HHHHHHHHhHHHHHHHHHHHH
Confidence 999999999999999999887
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00029 Score=66.00 Aligned_cols=75 Identities=19% Similarity=0.076 Sum_probs=52.1
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.++.++.+|++|.+++.+++ ..+|.++|.++.... ...+++..+++|+.+++.+++++.+.+. -++|
T Consensus 57 ~~~~~~~~Dl~d~~~~~~~l-------~~~d~v~~~~~~~~~-----~~~~~~~~~~~nv~gt~~ll~aa~~~~~-v~ri 123 (297)
T PLN02583 57 ERLKVFDVDPLDYHSILDAL-------KGCSGLFCCFDPPSD-----YPSYDEKMVDVEVRAAHNVLEACAQTDT-IEKV 123 (297)
T ss_pred CceEEEEecCCCHHHHHHHH-------cCCCEEEEeCccCCc-----ccccHHHHHHHHHHHHHHHHHHHHhcCC-ccEE
Confidence 45778899999988775433 357888886654321 1124678899999999999998877542 2577
Q ss_pred EEEecccc
Q psy2266 89 VNVASKLG 96 (313)
Q Consensus 89 V~isS~~~ 96 (313)
|++||..+
T Consensus 124 V~~SS~~a 131 (297)
T PLN02583 124 VFTSSLTA 131 (297)
T ss_pred EEecchHh
Confidence 77777654
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.81 E-value=2.9e-05 Score=71.54 Aligned_cols=91 Identities=19% Similarity=0.084 Sum_probs=66.4
Q ss_pred cCCceEEEEecccccccCCCch---hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC--CCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQ---ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP--GSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~---~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~--~~~----~~~ 152 (313)
+.|.+|+.+........+.... ..+ ....+|..+.++++++++.+.+.+|++|+||||||.... .++ .++
T Consensus 40 ~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~ 119 (280)
T PLN02253 40 KHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSE 119 (280)
T ss_pred HcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHH
Confidence 4567887776543221111000 011 234678889999999999999999999999999998643 223 378
Q ss_pred hhhhhhcccccHHHHHHHHhh
Q psy2266 153 AETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p 173 (313)
|+.++++|+.|++.++++++|
T Consensus 120 ~~~~~~~N~~g~~~~~~~~~~ 140 (280)
T PLN02253 120 FEKVFDVNVKGVFLGMKHAAR 140 (280)
T ss_pred HHHHHhHhhHHHHHHHHHHHH
Confidence 999999999999999999887
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.81 E-value=3.4e-05 Score=70.06 Aligned_cols=161 Identities=20% Similarity=0.174 Sum_probs=121.1
Q ss_pred HHHhcc-cCCceEEEEecccccccCCCch-hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC--CCc--
Q psy2266 77 ILFPLL-RPHARVVNVASKLGMLYNVPSQ-ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP--GSF-- 149 (313)
Q Consensus 77 a~~~~m-~~~g~IV~isS~~~~~~~~~~~-~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~--~~~-- 149 (313)
+++..+ +++.+++.++.......+.... ..+ ....+|..+.++++++++.+.+.+|++|++|||||.... .++
T Consensus 25 ~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~ 104 (255)
T PRK05717 25 GIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLES 104 (255)
T ss_pred HHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhh
Confidence 333333 4566777775433221111000 001 124678889999999999999999999999999998643 232
Q ss_pred --chhhhhhhhcccccHHHHHHHHhhcccC-CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhh
Q psy2266 150 --GQRAETTLATNFFALVTVCHILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKE 226 (313)
Q Consensus 150 --~~~~~~~~~~N~~g~~~~~~~~~p~l~~-~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (313)
.++|+.++++|+.|++.+++++.|.|++ +|+||++||..+...
T Consensus 105 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~---------------------------------- 150 (255)
T PRK05717 105 LSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQS---------------------------------- 150 (255)
T ss_pred CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCC----------------------------------
Confidence 4689999999999999999999999855 589999999987641
Q ss_pred cccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 227 GKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 227 ~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
.....+|+++|+|+..+++.++.++.. +|+||+|+||+++|++..
T Consensus 151 ------~~~~~~Y~~sKaa~~~~~~~la~~~~~-----~i~v~~i~Pg~i~t~~~~ 195 (255)
T PRK05717 151 ------EPDTEAYAASKGGLLALTHALAISLGP-----EIRVNAVSPGWIDARDPS 195 (255)
T ss_pred ------CCCCcchHHHHHHHHHHHHHHHHHhcC-----CCEEEEEecccCcCCccc
Confidence 123356999999999999988888753 599999999999999754
|
|
| >KOG4022|consensus | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0001 Score=63.56 Aligned_cols=130 Identities=13% Similarity=0.059 Sum_probs=95.5
Q ss_pred cCCCHHHHHHHHHHHHHHcC--CccEEEeccCcCCCCCcc-----hhhhhhhhcccccHHHHHHHHhhcccCCCceEEec
Q psy2266 113 ESLTEDQLLDMMTDYVQYNG--PLDKILDTAMDTAPGSFG-----QRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 185 (313)
Q Consensus 113 d~~~~~~~~~~~~~~~~~~G--~lD~Linna~~~~~~~~~-----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vs 185 (313)
+..-.+|-+..++..-+..+ ++|.++.-||+..-+.-. ...+-|+.-.++...--.+..-.+||++|-.-..+
T Consensus 50 ~~swtEQe~~v~~~vg~sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtG 129 (236)
T KOG4022|consen 50 NKSWTEQEQSVLEQVGSSLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTG 129 (236)
T ss_pred CcchhHHHHHHHHHHHHhhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecc
Confidence 33345677777777777764 899999999887666432 33444666666666666677777888887777766
Q ss_pred CCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCC
Q psy2266 186 SKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPD 265 (313)
Q Consensus 186 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~g 265 (313)
..+++- +-+++..|+.+|+|+..|++.|+.+-..- +.|
T Consensus 130 AkaAl~----------------------------------------gTPgMIGYGMAKaAVHqLt~SLaak~SGl--P~g 167 (236)
T KOG4022|consen 130 AKAALG----------------------------------------GTPGMIGYGMAKAAVHQLTSSLAAKDSGL--PDG 167 (236)
T ss_pred cccccC----------------------------------------CCCcccchhHHHHHHHHHHHHhcccccCC--CCC
Confidence 666654 23456679999999999998888765433 568
Q ss_pred eEEEeeccccccccccccc
Q psy2266 266 IIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 266 I~vn~v~PG~v~T~~~~~~ 284 (313)
--+.+|.|=..+|||+|.+
T Consensus 168 saa~~ilPVTLDTPMNRKw 186 (236)
T KOG4022|consen 168 SAALTILPVTLDTPMNRKW 186 (236)
T ss_pred ceeEEEeeeeccCcccccc
Confidence 8889999999999999986
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=3.6e-05 Score=70.37 Aligned_cols=90 Identities=12% Similarity=0.118 Sum_probs=68.7
Q ss_pred cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
+.+.++|.+.+......+.. ..+ + ....+|..++++++.+++.+.+++|++|++++|||.....++ .+.
T Consensus 32 ~~G~~vv~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~ 110 (265)
T PRK07097 32 KAGATIVFNDINQELVDKGL-AAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAED 110 (265)
T ss_pred HCCCeEEEEeCCHHHHHHHH-HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHH
Confidence 45778877765443322111 111 1 124678889999999999999999999999999998766654 368
Q ss_pred hhhhhhcccccHHHHHHHHhh
Q psy2266 153 AETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p 173 (313)
|+.++++|+.|++.+++.++|
T Consensus 111 ~~~~~~~n~~~~~~l~~~~~~ 131 (265)
T PRK07097 111 FRQVIDIDLNAPFIVSKAVIP 131 (265)
T ss_pred HHHHHHhhhHHHHHHHHHHHH
Confidence 999999999999999999998
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=3.5e-05 Score=72.20 Aligned_cols=171 Identities=17% Similarity=0.106 Sum_probs=121.0
Q ss_pred cCCceEEEEecccccccCCCch------hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC--cchhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQ------ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS--FGQRA 153 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~------~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~--~~~~~ 153 (313)
+.+.++|.+++......+.... ..+ ....+|..+.++++++++.+.+++|++|+||||||...... ..+++
T Consensus 38 ~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~ 117 (306)
T PRK06197 38 AKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGF 117 (306)
T ss_pred HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCc
Confidence 4566887777654332211000 001 12456888999999999999999999999999999864432 24788
Q ss_pred hhhhhcccccHHHHHHHHhhcccC--CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhccccc
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRP--HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKE 231 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~--~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (313)
+..|++|+.|++.+++.++|.|++ .++||++||..+..+.... .... +...
T Consensus 118 ~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~--------~~~~-------------------~~~~ 170 (306)
T PRK06197 118 ELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIH--------FDDL-------------------QWER 170 (306)
T ss_pred chhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCC--------cccc-------------------Cccc
Confidence 999999999999999999999976 4799999998764311100 0000 0001
Q ss_pred CCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEe--eccccccccccccc
Q psy2266 232 AGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNP--VHPGYVNTDLTEHK 284 (313)
Q Consensus 232 ~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~--v~PG~v~T~~~~~~ 284 (313)
...+..+|+.||+++..+++.++++++.. ||+|++ ++||+|+|++.+..
T Consensus 171 ~~~~~~~Y~~SK~a~~~~~~~la~~l~~~----~i~v~~v~~~PG~v~T~~~~~~ 221 (306)
T PRK06197 171 RYNRVAAYGQSKLANLLFTYELQRRLAAA----GATTIAVAAHPGVSNTELARNL 221 (306)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHhhcC----CCCeEEEEeCCCcccCcccccC
Confidence 12234569999999999999988888755 766665 47999999997753
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00015 Score=69.01 Aligned_cols=124 Identities=14% Similarity=0.024 Sum_probs=77.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccC-------CCceE
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP-------HARVV 182 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~-------~g~iv 182 (313)
..+|..+.++++.+++. .++|+++|+|+........+..+..+++|+.|+..+++++.+.|++ ..++|
T Consensus 55 ~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i 129 (352)
T PRK10084 55 EHADICDRAELDRIFAQ-----HQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFH 129 (352)
T ss_pred EEecCCCHHHHHHHHHh-----cCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEE
Confidence 35677788888777764 3799999999875433333456789999999999999999887632 24789
Q ss_pred EecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhh
Q psy2266 183 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATL 257 (313)
Q Consensus 183 ~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l 257 (313)
++||....-......+....-....+++ +....+...|+.||.+...+++.+++..
T Consensus 130 ~~SS~~vyg~~~~~~~~~~~~~~~~~~E-------------------~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 185 (352)
T PRK10084 130 HISTDEVYGDLPHPDEVENSEELPLFTE-------------------TTAYAPSSPYSASKASSDHLVRAWLRTY 185 (352)
T ss_pred EecchhhcCCCCccccccccccCCCccc-------------------cCCCCCCChhHHHHHHHHHHHHHHHHHh
Confidence 9988754321000000000000000000 0122344569999999999997766553
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=9.3e-05 Score=68.24 Aligned_cols=66 Identities=20% Similarity=0.194 Sum_probs=59.1
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+.+|..++++++.+++.+.+.+|++|+++||||.....++. ++|+.++++|+.|++.++++++|.|
T Consensus 67 ~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~ 136 (273)
T PRK08278 67 LVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHL 136 (273)
T ss_pred EEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 45788899999999999999999999999999987666553 6799999999999999999999976
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=3.6e-05 Score=70.40 Aligned_cols=97 Identities=18% Similarity=0.184 Sum_probs=72.8
Q ss_pred cCCceEEEEecccccccCCCch----hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQ----ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRA 153 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~----~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~ 153 (313)
++|.+|+.+++......+.... +.+ ....+|..+++++.++++.+.+.+|++|+++||||.....++. ++|
T Consensus 32 ~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~ 111 (263)
T PRK07814 32 EAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDL 111 (263)
T ss_pred HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHH
Confidence 4567887777654332221111 001 1245788899999999999999999999999999986655543 678
Q ss_pred hhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
+.++++|+.|++.+++++.|.|++..
T Consensus 112 ~~~~~~n~~~~~~l~~~~~~~~~~~~ 137 (263)
T PRK07814 112 ADAFTFNVATAHALTVAAVPLMLEHS 137 (263)
T ss_pred HHHHHhhcHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999997643
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=5.3e-05 Score=68.78 Aligned_cols=90 Identities=16% Similarity=0.128 Sum_probs=68.1
Q ss_pred cCCceEEEEecccccccCCCchhh-------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----c
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----G 150 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~ 150 (313)
+++.+|+.+++......... ..+ + ....+|..++++++++++.+.+.+|++|++++|||.....++ .
T Consensus 31 ~~G~~v~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~ 109 (257)
T PRK09242 31 GLGADVLIVARDADALAQAR-DELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTE 109 (257)
T ss_pred HcCCEEEEEeCCHHHHHHHH-HHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCH
Confidence 45778887776543322111 111 1 123568889999999999999999999999999998655443 4
Q ss_pred hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++|+.++++|+.|++.++++++|
T Consensus 110 ~~~~~~~~~n~~~~~~l~~~~~~ 132 (257)
T PRK09242 110 DEWRGIFETNLFSAFELSRYAHP 132 (257)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHH
Confidence 78999999999999999999988
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.76 E-value=5.2e-05 Score=68.24 Aligned_cols=70 Identities=9% Similarity=0.069 Sum_probs=62.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
..+|..+.+++..+++.+.+.+|++|++|||||.....++ .++|+.++++|+.+++.++++++|.|++.+
T Consensus 57 ~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 130 (248)
T TIGR01832 57 LTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQG 130 (248)
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Confidence 4678889999999999999999999999999999766554 368999999999999999999999998754
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=4.1e-05 Score=71.67 Aligned_cols=100 Identities=19% Similarity=0.197 Sum_probs=72.7
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchh----hh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQE----LR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~----~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~ 149 (313)
++++..+ ++|.+|+.+++......+..... .. ..+.+|..+.+++.++++.+.+.+|++|+++||||.....++
T Consensus 54 ~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~ 133 (293)
T PRK05866 54 EAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPL 133 (293)
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcch
Confidence 3344333 44678887776543332221110 01 124568889999999999999999999999999998766664
Q ss_pred c------hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 150 G------QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 150 ~------~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
. ++++.++++|+.|++.++++++|.|
T Consensus 134 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 165 (293)
T PRK05866 134 AESLDRWHDVERTMVLNYYAPLRLIRGLAPGM 165 (293)
T ss_pred hhccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 4567899999999999999999976
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=7.8e-05 Score=67.68 Aligned_cols=89 Identities=19% Similarity=0.194 Sum_probs=68.0
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC--CCCc----chhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA--PGSF----GQRAETT 156 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~--~~~~----~~~~~~~ 156 (313)
+++.+|+.+++...... ........+|..++++++++++.+.+.+|++|+++||||... .+++ .++|+.+
T Consensus 31 ~~G~~v~~~~r~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~ 106 (260)
T PRK06523 31 EAGARVVTTARSRPDDL----PEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDE 106 (260)
T ss_pred HCCCEEEEEeCChhhhc----CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHH
Confidence 45677777766432211 011123567888999999999999999999999999999753 2332 3789999
Q ss_pred hhcccccHHHHHHHHhhcc
Q psy2266 157 LATNFFALVTVCHILFPLL 175 (313)
Q Consensus 157 ~~~N~~g~~~~~~~~~p~l 175 (313)
+++|+.|++.++++++|.|
T Consensus 107 ~~~n~~~~~~~~~~~~~~~ 125 (260)
T PRK06523 107 LNLNLLAAVRLDRALLPGM 125 (260)
T ss_pred HhHhhHHHHHHHHHHHHHH
Confidence 9999999999999999977
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=4.8e-05 Score=69.04 Aligned_cols=96 Identities=13% Similarity=0.064 Sum_probs=72.2
Q ss_pred cCCceEEEEecccccccCCCchh-------hhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQE-------LRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~-------~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~ 151 (313)
+.+.+||.+.+............ .-....+|..+.+++..+++.+.+.+|++|+++||||.....++ .+
T Consensus 24 ~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~ 103 (259)
T PRK12384 24 EEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLG 103 (259)
T ss_pred HCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHH
Confidence 34678887765433222211110 01234668889999999999999999999999999998766554 26
Q ss_pred hhhhhhhcccccHHHHHHHHhhcccCC
Q psy2266 152 RAETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
+|+.++++|+.|++.++++++|.|++.
T Consensus 104 ~~~~~~~~n~~~~~~l~~~~~~~l~~~ 130 (259)
T PRK12384 104 DFDRSLQVNLVGYFLCAREFSRLMIRD 130 (259)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHhC
Confidence 789999999999999999999999864
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.75 E-value=6.3e-05 Score=68.27 Aligned_cols=66 Identities=15% Similarity=0.246 Sum_probs=58.6
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc---hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG---QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~---~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..+.+++.++++.+.+.+|++|+++||||...+.++. ++|+..+++|+.|++.++++++|.|
T Consensus 65 ~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 133 (255)
T PRK06113 65 CRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEM 133 (255)
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 45788899999999999999999999999999986655543 7888999999999999999999976
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=5e-05 Score=70.04 Aligned_cols=100 Identities=16% Similarity=0.180 Sum_probs=72.7
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchh-hh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc--
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQE-LR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG-- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~-~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~-- 150 (313)
++++..+ ++|.+|+.+++............ .+ ....+|..+++++..+++.+.+.+|++|+++||||....+++.
T Consensus 18 ~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~ 97 (277)
T PRK06180 18 RALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEES 97 (277)
T ss_pred HHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccC
Confidence 3344433 44678887776543322211110 01 1245688899999999999999999999999999987665543
Q ss_pred --hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 151 --QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 151 --~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+.|+.++++|+.|++.+++.++|.|
T Consensus 98 ~~~~~~~~~~~n~~g~~~l~~~~~~~~ 124 (277)
T PRK06180 98 PLAEMRRQFEVNVFGAVAMTKAVLPGM 124 (277)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6788999999999999999999966
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=5e-05 Score=69.86 Aligned_cols=70 Identities=19% Similarity=0.210 Sum_probs=46.6
Q ss_pred HHHhcc-cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC
Q psy2266 77 ILFPLL-RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG 147 (313)
Q Consensus 77 a~~~~m-~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~ 147 (313)
+++..+ ++|.+|+.+++......... ..+ + ..+.+|..+.+++.++++.+.+++|++|++|||||...+.
T Consensus 25 ~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~ 101 (278)
T PRK08277 25 AMAKELARAGAKVAILDRNQEKAEAVV-AEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPK 101 (278)
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcc
Confidence 333333 45778877766533222111 111 1 1246677899999999999999999999999999976443
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=5.5e-05 Score=69.62 Aligned_cols=100 Identities=20% Similarity=0.229 Sum_probs=72.8
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCch--hhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc--
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQ--ELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG-- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~-- 150 (313)
++++..+ +++..|+.+++....+.+.... .....+.+|..+++++.++++.+.+.+|++|+++||||....+++.
T Consensus 17 ~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~ 96 (275)
T PRK08263 17 RAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEV 96 (275)
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccccccC
Confidence 3344444 4466777666544332211100 0012245688899999999999999999999999999998776653
Q ss_pred --hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 151 --QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 151 --~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
++|+.++++|+.|++.++++++|.|
T Consensus 97 ~~~~~~~~~~~n~~~~~~l~~~~~~~~ 123 (275)
T PRK08263 97 TESEARAQIDTNFFGALWVTQAVLPYL 123 (275)
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 6899999999999999999999977
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00036 Score=66.76 Aligned_cols=68 Identities=18% Similarity=0.127 Sum_probs=48.3
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
++.++.+|++|.+++.++++ ++|++||+||... +.+...+++|+.++..+++++.+. .-+++|
T Consensus 61 ~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~--------~~~~~~~~~nv~gt~~ll~aa~~~--~v~r~V 123 (342)
T PLN02214 61 RLILCKADLQDYEALKAAID-------GCDGVFHTASPVT--------DDPEQMVEPAVNGAKFVINAAAEA--KVKRVV 123 (342)
T ss_pred cEEEEecCcCChHHHHHHHh-------cCCEEEEecCCCC--------CCHHHHHHHHHHHHHHHHHHHHhc--CCCEEE
Confidence 46778899999888776654 4899999998642 134567888888888888876542 123666
Q ss_pred EEecc
Q psy2266 90 NVASK 94 (313)
Q Consensus 90 ~isS~ 94 (313)
++||.
T Consensus 124 ~~SS~ 128 (342)
T PLN02214 124 ITSSI 128 (342)
T ss_pred Eeccc
Confidence 66664
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00052 Score=65.17 Aligned_cols=75 Identities=16% Similarity=0.269 Sum_probs=51.6
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.++.++.+|++|.+++.++++. ..+|++||+||+.... ...+.+...+++|+.++..+++++... ...++
T Consensus 58 ~~~~~~~~D~~~~~~l~~~~~~-----~~~d~vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~ 127 (352)
T PLN02240 58 DNLVFHKVDLRDKEALEKVFAS-----TRFDAVIHFAGLKAVG---ESVAKPLLYYDNNLVGTINLLEVMAKH--GCKKL 127 (352)
T ss_pred ccceEEecCcCCHHHHHHHHHh-----CCCCEEEEccccCCcc---ccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEE
Confidence 4577889999999998887764 2799999999975422 112455677888888888877754321 12355
Q ss_pred EEEec
Q psy2266 89 VNVAS 93 (313)
Q Consensus 89 V~isS 93 (313)
|++||
T Consensus 128 v~~Ss 132 (352)
T PLN02240 128 VFSSS 132 (352)
T ss_pred EEEcc
Confidence 55555
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=6.4e-05 Score=68.51 Aligned_cols=64 Identities=9% Similarity=0.099 Sum_probs=56.8
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+.+|..+.++++++++.+.+.+|++|++|+|||.....++ .++|+.++++|+.|++.+++.++|
T Consensus 73 ~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 140 (256)
T PRK12859 73 MELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFAR 140 (256)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3567889999999999999999999999999998655554 368999999999999999999987
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=7e-05 Score=67.71 Aligned_cols=99 Identities=18% Similarity=0.200 Sum_probs=71.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-C
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-G 147 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~ 147 (313)
++++..+ ++|.+|+.+++......+.. ..+. ....+|..++++++.+++.+.+++|++|+++||||.... .
T Consensus 19 ~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~ 97 (258)
T PRK07890 19 RTLAVRAARAGADVVLAARTAERLDEVA-AEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMK 97 (258)
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCC
Confidence 3344433 45678877766543322211 1111 235667789999999999999999999999999998543 3
Q ss_pred Cc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 148 SF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 148 ~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
++ .++|+.++++|+.|++.+++++.|.|
T Consensus 98 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 129 (258)
T PRK07890 98 PLADADFAHWRAVIELNVLGTLRLTQAFTPAL 129 (258)
T ss_pred CcccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 33 37899999999999999999999966
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0005 Score=63.89 Aligned_cols=128 Identities=14% Similarity=0.047 Sum_probs=83.9
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLG 189 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~ 189 (313)
..+|..++++++++++. +++|++++|||.....+..+.....+.+|+.+...+++++... +.+++|++||...
T Consensus 52 ~~~D~~~~~~~~~~~~~-----~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~ss~~~ 124 (328)
T TIGR01179 52 VEGDLRDRELLDRLFEE-----HKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT--GVKKFIFSSSAAV 124 (328)
T ss_pred EECCCCCHHHHHHHHHh-----CCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc--CCCEEEEecchhh
Confidence 34677788887777653 5899999999987655555566678999999999998875431 2268999888653
Q ss_pred ccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEE
Q psy2266 190 MLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVN 269 (313)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn 269 (313)
.. . .... ..++ ++ ...+...|+.+|.+...+++.++++ ..++++.
T Consensus 125 ~g-~-~~~~--------~~~e-----------------~~--~~~~~~~y~~sK~~~e~~~~~~~~~------~~~~~~~ 169 (328)
T TIGR01179 125 YG-E-PSSI--------PISE-----------------DS--PLGPINPYGRSKLMSERILRDLSKA------DPGLSYV 169 (328)
T ss_pred cC-C-CCCC--------Cccc-----------------cC--CCCCCCchHHHHHHHHHHHHHHHHh------ccCCCEE
Confidence 21 0 0000 0000 00 1123346999999999999665543 1267888
Q ss_pred eecccccccc
Q psy2266 270 PVHPGYVNTD 279 (313)
Q Consensus 270 ~v~PG~v~T~ 279 (313)
.+-|+.+-.+
T Consensus 170 ilR~~~v~g~ 179 (328)
T TIGR01179 170 ILRYFNVAGA 179 (328)
T ss_pred EEecCcccCC
Confidence 8888766554
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00011 Score=66.05 Aligned_cols=66 Identities=17% Similarity=0.207 Sum_probs=59.0
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..+.++++++++.+.+++|++|++++|||....+++ .++++.++++|+.+++.+++.++|.|
T Consensus 56 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 125 (251)
T PRK07069 56 AVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYL 125 (251)
T ss_pred EEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4568889999999999999999999999999998776654 36789999999999999999999977
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=7.4e-05 Score=67.75 Aligned_cols=92 Identities=16% Similarity=0.180 Sum_probs=70.0
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
++|.+|+.+++........ ...+. ....+|..+.++++++++.+.+.+|++|++++|||.....++ .++
T Consensus 32 ~~G~~V~~~~r~~~~~~~~-~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~ 110 (255)
T PRK07523 32 QAGAEVILNGRDPAKLAAA-AESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADA 110 (255)
T ss_pred HcCCEEEEEeCCHHHHHHH-HHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHH
Confidence 4577887776644322111 11111 124568889999999999999999999999999998776665 367
Q ss_pred hhhhhhcccccHHHHHHHHhhcc
Q psy2266 153 AETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
|+.++++|+.|++.+++++.|.|
T Consensus 111 ~~~~~~~n~~~~~~l~~~~~~~~ 133 (255)
T PRK07523 111 FERLLRTNISSVFYVGQAVARHM 133 (255)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHH
Confidence 89999999999999999999866
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00055 Score=64.08 Aligned_cols=74 Identities=14% Similarity=0.180 Sum_probs=50.7
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
++.++.+|+.|.+++.++++ ++|++||+||..... ..+.....+++|+.++..+++++...+ .-.++|
T Consensus 56 ~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~A~~~~~~----~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~v 123 (322)
T PLN02662 56 RLHLFKANLLEEGSFDSVVD-------GCEGVFHTASPFYHD----VTDPQAELIDPAVKGTLNVLRSCAKVP-SVKRVV 123 (322)
T ss_pred ceEEEeccccCcchHHHHHc-------CCCEEEEeCCcccCC----CCChHHHHHHHHHHHHHHHHHHHHhCC-CCCEEE
Confidence 56788999999887766654 589999999975321 111224677889999988888876532 123666
Q ss_pred EEeccc
Q psy2266 90 NVASKL 95 (313)
Q Consensus 90 ~isS~~ 95 (313)
++||..
T Consensus 124 ~~SS~~ 129 (322)
T PLN02662 124 VTSSMA 129 (322)
T ss_pred EccCHH
Confidence 666654
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00015 Score=65.36 Aligned_cols=87 Identities=16% Similarity=0.185 Sum_probs=67.7
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLA 158 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~ 158 (313)
+++.+++.+.+.. .... ...-....+|..++++++++++.+.+++|++|+++||||....+++ .++|+.+++
T Consensus 30 ~~G~~v~~~~~~~--~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~ 105 (252)
T PRK08220 30 EAGAKVIGFDQAF--LTQE--DYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFA 105 (252)
T ss_pred HCCCEEEEEecch--hhhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 4577777776544 1110 1111235678889999999999999999999999999998776664 368899999
Q ss_pred cccccHHHHHHHHhh
Q psy2266 159 TNFFALVTVCHILFP 173 (313)
Q Consensus 159 ~N~~g~~~~~~~~~p 173 (313)
+|+.+++.++++++|
T Consensus 106 ~n~~~~~~l~~~~~~ 120 (252)
T PRK08220 106 VNAGGAFNLFRAVMP 120 (252)
T ss_pred HhhHHHHHHHHHHHH
Confidence 999999999999987
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=8.2e-05 Score=66.76 Aligned_cols=91 Identities=11% Similarity=0.160 Sum_probs=67.6
Q ss_pred cCCceEEEEecccccccCCCch----hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQ----ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRA 153 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~----~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~ 153 (313)
+++.+|+.+++......+.... +.+ ....+|..+.+++..+++.+.+++|++|++++|||.....++ .++|
T Consensus 28 ~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~ 107 (241)
T PRK07454 28 KAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDW 107 (241)
T ss_pred HCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHH
Confidence 3566777777654332221100 011 124568889999999999999999999999999998765553 3688
Q ss_pred hhhhhcccccHHHHHHHHhh
Q psy2266 154 ETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p 173 (313)
+.++++|+.+++.+++.++|
T Consensus 108 ~~~~~~n~~~~~~~~~~~~~ 127 (241)
T PRK07454 108 QWVIQLNLTSVFQCCSAVLP 127 (241)
T ss_pred HHHHHhccHHHHHHHHHHHH
Confidence 99999999999999999987
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00031 Score=63.65 Aligned_cols=74 Identities=8% Similarity=0.185 Sum_probs=65.3
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC----Cc----chhhhhhhhcccccHHHHHHHHhhcccCCCce
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG----SF----GQRAETTLATNFFALVTVCHILFPLLRPHARV 181 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~----~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~i 181 (313)
..||+.++++++++.+++.+++|.+|.|+++-+..... .| -+.|...+++...+...++|++.|+|.++|+|
T Consensus 61 ~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSi 140 (259)
T COG0623 61 LPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSI 140 (259)
T ss_pred EecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcE
Confidence 57889999999999999999999999999998875422 22 37899999999999999999999999999888
Q ss_pred EE
Q psy2266 182 VN 183 (313)
Q Consensus 182 v~ 183 (313)
+-
T Consensus 141 lt 142 (259)
T COG0623 141 LT 142 (259)
T ss_pred EE
Confidence 75
|
|
| >KOG1199|consensus | Back alignment and domain information |
|---|
Probab=97.65 E-value=2.4e-05 Score=67.98 Aligned_cols=93 Identities=14% Similarity=0.082 Sum_probs=68.6
Q ss_pred cCCceEEEEecccccccCCCchhhhh---hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcC-CCCCc---------
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQ---TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDT-APGSF--------- 149 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~-~~~~~--------- 149 (313)
+++.+++.+.-..+.-.+ ...+++. ..++|+.+++.+++.......+||++|.++||||+- ..+.+
T Consensus 31 kqgasv~lldlp~skg~~-vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ 109 (260)
T KOG1199|consen 31 KQGASVALLDLPQSKGAD-VAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHD 109 (260)
T ss_pred hcCceEEEEeCCcccchH-HHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeeccccccc
Confidence 456666655433322211 1234443 247788999999999999999999999999999983 22222
Q ss_pred chhhhhhhhcccccHHHHHHHHhhccc
Q psy2266 150 GQRAETTLATNFFALVTVCHILFPLLR 176 (313)
Q Consensus 150 ~~~~~~~~~~N~~g~~~~~~~~~p~l~ 176 (313)
.|++.+.+++|+.|+|.+++....+|-
T Consensus 110 ledfqrvidvn~~gtfnvirl~aglmg 136 (260)
T KOG1199|consen 110 LEDFQRVIDVNVLGTFNVIRLGAGLMG 136 (260)
T ss_pred HHHhhheeeeeeeeeeeeeeehhhhhc
Confidence 389999999999999999988887773
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=9e-05 Score=67.00 Aligned_cols=90 Identities=11% Similarity=0.075 Sum_probs=67.3
Q ss_pred cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC-Cc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG-SF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~-~~----~~ 151 (313)
+++.+++.+++......... ..+ + ....+|..+.++++.+++.+.+.+|++|+++||||..... ++ .+
T Consensus 29 ~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~ 107 (253)
T PRK06172 29 REGAKVVVADRDAAGGEETV-ALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEA 107 (253)
T ss_pred HcCCEEEEEeCCHHHHHHHH-HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHH
Confidence 45678888776543322111 111 1 1245678899999999999999999999999999986443 23 37
Q ss_pred hhhhhhhcccccHHHHHHHHhh
Q psy2266 152 RAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+|+.++++|+.+++.++++++|
T Consensus 108 ~~~~~~~~n~~~~~~~~~~~~~ 129 (253)
T PRK06172 108 EFDAIMGVNVKGVWLCMKYQIP 129 (253)
T ss_pred HHHHHHHHhhHHHHHHHHHHHH
Confidence 8999999999999999999987
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0001 Score=67.25 Aligned_cols=64 Identities=9% Similarity=0.034 Sum_probs=55.4
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC------CCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA------PGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~------~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..++++++++++.+.+.+|++|+|+||||... ..++ .++|.+++++|+.+.+.+++.++|
T Consensus 64 ~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 137 (260)
T PRK08416 64 YPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAK 137 (260)
T ss_pred EEcCCCCHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 466888999999999999999999999999998653 2333 368899999999999999999988
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=8e-05 Score=70.33 Aligned_cols=66 Identities=15% Similarity=0.192 Sum_probs=56.7
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEecc-CcCC----CCCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTA-MDTA----PGSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna-~~~~----~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+.+|..++++++.+++.+.+++|++|+||||| |... ..++ .++|..++++|+.|++.++++++|.|
T Consensus 72 ~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m 146 (305)
T PRK08303 72 VQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLL 146 (305)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 45788899999999999999999999999999 7531 1333 36789999999999999999999977
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0001 Score=67.53 Aligned_cols=89 Identities=12% Similarity=0.170 Sum_probs=66.5
Q ss_pred CCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhh
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRA 153 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~ 153 (313)
.+.+|+.+++......+. ...+. ..+.+|..++++++.+++.+.+.+|++|++|||||.....++ .++|
T Consensus 32 ~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~ 110 (264)
T PRK07576 32 AGANVAVASRSQEKVDAA-VAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGF 110 (264)
T ss_pred CCCEEEEEeCCHHHHHHH-HHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHH
Confidence 466777776544332211 11111 123568889999999999999999999999999987655554 3678
Q ss_pred hhhhhcccccHHHHHHHHhh
Q psy2266 154 ETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p 173 (313)
+.++++|+.|++.++++++|
T Consensus 111 ~~~~~~n~~g~~~l~~~~~~ 130 (264)
T PRK07576 111 KTVVDIDLLGTFNVLKAAYP 130 (264)
T ss_pred HHHHHHHhHHHHHHHHHHHH
Confidence 89999999999999999988
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0001 Score=66.88 Aligned_cols=90 Identities=16% Similarity=0.134 Sum_probs=66.2
Q ss_pred cCCceEEEEecccccccCCCchhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC--CCc----chhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP--GSF----GQRAET 155 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~--~~~----~~~~~~ 155 (313)
+++..|+.+++......... ..+. ....+|..++++++.+++.+.+.+|++|++++|||...+ .++ .+.|+.
T Consensus 29 ~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~ 107 (255)
T PRK06057 29 AEGATVVVGDIDPEAGKAAA-DEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQR 107 (255)
T ss_pred HcCCEEEEEeCCHHHHHHHH-HHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHH
Confidence 35677777765432221110 1111 235668889999999999999999999999999998643 232 367899
Q ss_pred hhhcccccHHHHHHHHhh
Q psy2266 156 TLATNFFALVTVCHILFP 173 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p 173 (313)
++++|+.|++.+++.++|
T Consensus 108 ~~~~n~~~~~~l~~~~~~ 125 (255)
T PRK06057 108 VQDVNLTSVYLCCKAALP 125 (255)
T ss_pred HHHHhcHHHHHHHHHHHH
Confidence 999999999999999998
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00011 Score=66.85 Aligned_cols=70 Identities=13% Similarity=0.135 Sum_probs=61.4
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
..+|..++++++.+++.+.+.+|++|++++|||.....++. ++|..++++|+.|++.++++++|.|++.+
T Consensus 74 ~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 147 (262)
T PRK07831 74 VVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARG 147 (262)
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 35677899999999999999999999999999987666553 68999999999999999999999998643
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00011 Score=66.37 Aligned_cols=96 Identities=9% Similarity=0.064 Sum_probs=72.0
Q ss_pred cCCceEEEEecccccccCCCch----hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQ----ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRA 153 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~----~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~ 153 (313)
+++.+|+.+++....+.+.... +.+ +...+|..+.++++++++.+.+.+|++|++++|||....+++ .++|
T Consensus 31 ~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~ 110 (258)
T PRK06949 31 QAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADF 110 (258)
T ss_pred HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHH
Confidence 3466777776654433222111 001 234667889999999999999999999999999998766554 3679
Q ss_pred hhhhhcccccHHHHHHHHhhcccCC
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
+.++++|+.|++.++++++|.|++.
T Consensus 111 ~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (258)
T PRK06949 111 DFVFDTNTRGAFFVAQEVAKRMIAR 135 (258)
T ss_pred HHHHhhcchhhHHHHHHHHHHHHhc
Confidence 9999999999999999999988653
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=9.8e-05 Score=66.45 Aligned_cols=90 Identities=13% Similarity=0.076 Sum_probs=67.3
Q ss_pred cCCceEEEEecccccccCCCchhh------hhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC---CCCc----
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL------RQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA---PGSF---- 149 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~---~~~~---- 149 (313)
+++.++|.+++......... +.+ .....+|..+.++++.+++.+.+.+|++|++|+|||... .+++
T Consensus 28 ~~g~~vi~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~ 106 (250)
T PRK07774 28 REGASVVVADINAEGAERVA-KQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVP 106 (250)
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCC
Confidence 45678888876543322211 111 123467888999999999999999999999999999853 2333
Q ss_pred chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 ~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.+.|++++++|+.|++.++++++|
T Consensus 107 ~~~~~~~~~~n~~~~~~l~~~~~~ 130 (250)
T PRK07774 107 WDYYKKFMSVNLDGALVCTRAVYK 130 (250)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHH
Confidence 367889999999999999999987
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=9.7e-05 Score=66.90 Aligned_cols=97 Identities=13% Similarity=0.123 Sum_probs=71.8
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhh------hhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQEL------RQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ +.+.+|+.+++......... ..+ -....+|..+++++..+++.+.+.+|++|++++|||.....+
T Consensus 25 ~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~ 103 (256)
T PRK06124 25 FEIARALAGAGAHVLVNGRNAATLEAAV-AALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRP 103 (256)
T ss_pred HHHHHHHHHcCCeEEEEeCCHHHHHHHH-HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence 3344333 45778888877543322111 111 123466888999999999999999999999999999876666
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+. ++|+.++.+|+.|++.+++.++|
T Consensus 104 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 132 (256)
T PRK06124 104 LAELDDAAIRALLETDLVAPILLSRLAAQ 132 (256)
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 53 68999999999999999999998
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00097 Score=62.96 Aligned_cols=74 Identities=14% Similarity=0.152 Sum_probs=48.2
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
++.++.+|++|.+++.++++. .++|++||+||+...... .+.....+++|+.++..+++++... ..+++|
T Consensus 51 ~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vvh~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v 120 (338)
T PRK10675 51 HPTFVEGDIRNEALLTEILHD-----HAIDTVIHFAGLKAVGES---VQKPLEYYDNNVNGTLRLISAMRAA--NVKNLI 120 (338)
T ss_pred CceEEEccCCCHHHHHHHHhc-----CCCCEEEECCccccccch---hhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEE
Confidence 456788999999887776652 469999999998643211 1223456778888888777754331 123455
Q ss_pred EEec
Q psy2266 90 NVAS 93 (313)
Q Consensus 90 ~isS 93 (313)
++||
T Consensus 121 ~~Ss 124 (338)
T PRK10675 121 FSSS 124 (338)
T ss_pred Eecc
Confidence 5554
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00015 Score=65.24 Aligned_cols=68 Identities=18% Similarity=0.192 Sum_probs=58.7
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-CCc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-GSF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
..+|..+.++++++++.+.+.+|++|++|+|||.... .++ .++|+.++++|+.|++.+++.++|.|..
T Consensus 57 ~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 129 (248)
T PRK06947 57 VAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLST 129 (248)
T ss_pred EEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 4678889999999999999999999999999998643 232 3678999999999999999999998864
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00012 Score=66.46 Aligned_cols=66 Identities=6% Similarity=0.136 Sum_probs=59.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..+.++++.+++.+.+.+|++|+++||||.....++ .++|+.++++|+.|++.++++++|.|
T Consensus 68 ~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 137 (258)
T PRK06935 68 VQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVM 137 (258)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 4678889999999999999999999999999998766554 36899999999999999999999977
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00012 Score=66.22 Aligned_cols=96 Identities=10% Similarity=-0.020 Sum_probs=71.4
Q ss_pred cCCceEEEEecccccccCCCch----hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQ----ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRA 153 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~----~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~ 153 (313)
+++.+|+.+++........... +.. ....+|..+.++++++++.+.+++|++|++|+|||....+++ .+.|
T Consensus 29 ~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~ 108 (262)
T PRK13394 29 RAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADW 108 (262)
T ss_pred HCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHH
Confidence 4577888776644222111100 001 124568889999999999999999999999999998765543 3678
Q ss_pred hhhhhcccccHHHHHHHHhhcccCC
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
+.++++|+.|++.+++.++|.|.+.
T Consensus 109 ~~~~~~n~~~~~~~~~~~l~~~~~~ 133 (262)
T PRK13394 109 KKMQAIHVDGAFLTTKAALKHMYKD 133 (262)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHhh
Confidence 9999999999999999999988764
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=97.59 E-value=7.6e-05 Score=67.82 Aligned_cols=68 Identities=9% Similarity=0.002 Sum_probs=53.5
Q ss_pred EEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 14 HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 14 ~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
..||+++.++++++++.+.+.+|++|+||||||+....++.+++ ++|++++ ..+.+++++-.-..+++
T Consensus 57 ~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~d~~~~~~~s~e~~~~~~---~~~~~~~~~~~~~Ki~~ 125 (227)
T TIGR02114 57 PNLSIREIETTKDLLITLKELVQEHDILIHSMAVSDYTPVYMTDLEQVQASD---NLNEFLSKQNHEAKISS 125 (227)
T ss_pred CcceeecHHHHHHHHHHHHHHcCCCCEEEECCEeccccchhhCCHHHHhhhc---chhhhhccccccCCccc
Confidence 35899999999999999999999999999999998777777776 8898774 45666666644333433
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00013 Score=65.66 Aligned_cols=92 Identities=14% Similarity=0.120 Sum_probs=69.9
Q ss_pred cCCceEEEEecccccccCCCchhh-----hhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----RQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRA 153 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~ 153 (313)
+++.+++.+++......+.. ..+ .....+|..++++++++++.+.+.+|++|+++||||....+++ .+++
T Consensus 27 ~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~ 105 (252)
T PRK06138 27 REGARVVVADRDAEAAERVA-AAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADW 105 (252)
T ss_pred HCCCeEEEecCCHHHHHHHH-HHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHH
Confidence 35668877776543222111 111 1234678889999999999999999999999999998765553 3678
Q ss_pred hhhhhcccccHHHHHHHHhhcc
Q psy2266 154 ETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+.++++|+.|++.+++.++|.|
T Consensus 106 ~~~~~~n~~~~~~l~~~~~~~~ 127 (252)
T PRK06138 106 DAVMRVNVGGVFLWAKYAIPIM 127 (252)
T ss_pred HHHHhhhhhhHHHHHHHHHHHH
Confidence 9999999999999999999965
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00012 Score=66.67 Aligned_cols=98 Identities=15% Similarity=0.118 Sum_probs=69.7
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCch--hhh-hhhcccCCCHHHHHHHHHHHHHH-cCCccEEEeccCcCCCCCcc
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQ--ELR-QTLFNESLTEDQLLDMMTDYVQY-NGPLDKILDTAMDTAPGSFG 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~--~~~-~~~~~d~~~~~~~~~~~~~~~~~-~G~lD~Linna~~~~~~~~~ 150 (313)
++++..+ +++.+++.+++......+.... +.+ ....+|..+.+++.++++.+.+. +|++|++++|||....+++.
T Consensus 15 ~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~ 94 (260)
T PRK08267 15 RATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFE 94 (260)
T ss_pred HHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccc
Confidence 3344333 4566777776544332222111 011 22456778999999999998887 89999999999987766553
Q ss_pred ----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 ----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 ----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++++.++++|+.|++.+++.+.|
T Consensus 95 ~~~~~~~~~~~~~n~~~~~~l~~~~~~ 121 (260)
T PRK08267 95 DIPLEAHDRVIDINVKGVLNGAHAALP 121 (260)
T ss_pred cCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 67899999999999999999987
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00014 Score=66.57 Aligned_cols=66 Identities=21% Similarity=0.289 Sum_probs=59.1
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..+++++.++++.+.+.++++|++|||||....+++. ++|+.++++|+.|++.+++.++|.|
T Consensus 54 ~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 123 (270)
T PRK05650 54 QRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLF 123 (270)
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 46677899999999999999999999999999988766653 6789999999999999999999977
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00014 Score=65.09 Aligned_cols=64 Identities=16% Similarity=0.098 Sum_probs=56.8
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..+.++++++++.+.+.+|++|++|+|||....+++ .++|+.++++|+.|++.+++++.|
T Consensus 57 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 124 (245)
T PRK12936 57 FPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTH 124 (245)
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHH
Confidence 4568889999999999999999999999999998766553 368899999999999999999987
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00011 Score=65.91 Aligned_cols=78 Identities=10% Similarity=0.122 Sum_probs=50.6
Q ss_pred CCceEEEEecccccccCCCch----hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc---------
Q psy2266 84 PHARVVNVASKLGMLYNVPSQ----ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF--------- 149 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~----~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~--------- 149 (313)
++.+|+.+++........... +.+ ....+|..+.++++++++.+.+.+|++|++++|||.....++
T Consensus 28 ~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~ 107 (253)
T PRK08217 28 KGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVT 107 (253)
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCcCccccccccccc
Confidence 466777776654332221111 001 124567779999999999999999999999999997654321
Q ss_pred ----chhhhhhhhccc
Q psy2266 150 ----GQRAETTLATNF 161 (313)
Q Consensus 150 ----~~~~~~~~~~N~ 161 (313)
.+.|+.++++|+
T Consensus 108 ~~~~~~~~~~~~~~n~ 123 (253)
T PRK08217 108 SKMSLEQFQSVIDVNL 123 (253)
T ss_pred ccCCHHHHHHHHhhhh
Confidence 245666666665
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00016 Score=65.13 Aligned_cols=93 Identities=15% Similarity=0.207 Sum_probs=69.2
Q ss_pred cCCceEEEEecccccccCCCchh------hh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQE------LR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~------~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~ 151 (313)
+.+..++.+++......+..... .. +...+|..+++++.++++.+.+++|++|++++|||.....++ .+
T Consensus 24 ~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~ 103 (248)
T PRK08251 24 AKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFW 103 (248)
T ss_pred HcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHH
Confidence 34567777766543332221110 01 124668889999999999999999999999999998766654 36
Q ss_pred hhhhhhhcccccHHHHHHHHhhcc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
.++.++++|+.|++.+++.++|.|
T Consensus 104 ~~~~~~~~n~~~~~~~~~~~~~~~ 127 (248)
T PRK08251 104 ANKATAETNFVAALAQCEAAMEIF 127 (248)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHH
Confidence 778899999999999999999965
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00017 Score=64.59 Aligned_cols=68 Identities=13% Similarity=0.047 Sum_probs=59.1
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
..+|..+.+++.++++...+.+|++|++++|||.....++ .++|+.++++|+.|++.+++.+++.+.+
T Consensus 53 ~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 124 (239)
T TIGR01831 53 LQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIR 124 (239)
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 4678889999999999999999999999999998766654 3789999999999999999998776654
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00018 Score=64.77 Aligned_cols=64 Identities=14% Similarity=0.210 Sum_probs=57.5
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..+++++.++++.+.+.+|++|++++|||.....++. +.++.++++|+.+++.++++++|
T Consensus 61 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 128 (247)
T PRK12935 61 VQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLP 128 (247)
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46688899999999999999999999999999997766543 78899999999999999999997
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00026 Score=61.44 Aligned_cols=82 Identities=6% Similarity=-0.044 Sum_probs=63.3
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC-Ccch-hhhhhhhcccccHHHHHHHHhhcccCC---------
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG-SFGQ-RAETTLATNFFALVTVCHILFPLLRPH--------- 178 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~-~~~~-~~~~~~~~N~~g~~~~~~~~~p~l~~~--------- 178 (313)
..+|..+.++++++++.+.+.+|++|+++||||..... ++.+ ..+..-.+|+.+.+..++.+.+.|++.
T Consensus 70 ~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (169)
T PRK06720 70 VSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDL 149 (169)
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecC
Confidence 45677799999999999999999999999999987643 4432 211122888888899999998876442
Q ss_pred CceEEecCCcccc
Q psy2266 179 ARVVNVASKLGML 191 (313)
Q Consensus 179 g~iv~vss~~~~~ 191 (313)
||...|||.+..+
T Consensus 150 ~~~~~~~~~~~~~ 162 (169)
T PRK06720 150 PIFGIIGTKGQSF 162 (169)
T ss_pred ceeeEeccccccc
Confidence 7888899887754
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00012 Score=67.16 Aligned_cols=99 Identities=15% Similarity=0.133 Sum_probs=71.7
Q ss_pred HHHhcc-cCCceEEEEecccccccCCCch-hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----
Q psy2266 77 ILFPLL-RPHARVVNVASKLGMLYNVPSQ-ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF---- 149 (313)
Q Consensus 77 a~~~~m-~~~g~IV~isS~~~~~~~~~~~-~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~---- 149 (313)
+++..+ +++.+++.+++........... ..+ ..+.+|..+.++++++++.+.+.+|++|+++||||....++.
T Consensus 17 ~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~ 96 (276)
T PRK06482 17 GMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELS 96 (276)
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCC
Confidence 344333 4466777776654332211100 001 124568889999999999999999999999999998876664
Q ss_pred chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 150 GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 150 ~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
.+.++.++++|+.|++.+++.++|.|
T Consensus 97 ~~~~~~~~~~n~~g~~~l~~~~~~~~ 122 (276)
T PRK06482 97 DAQIRRQIDTNLIGSIQVIRAALPHL 122 (276)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 35788999999999999999999976
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00011 Score=66.33 Aligned_cols=93 Identities=16% Similarity=0.101 Sum_probs=68.5
Q ss_pred cCCceEEEEecccccccCCCchh-----hhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQE-----LRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~~~----~~~ 152 (313)
+.|.+||.+++...........- ..+...+|..+.++++++++.+.+.+|++|+++||||... ..++ .++
T Consensus 30 ~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~ 109 (252)
T PRK07035 30 QQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGA 109 (252)
T ss_pred HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHH
Confidence 34678888876543322211110 0122456888999999999999999999999999998643 2332 367
Q ss_pred hhhhhhcccccHHHHHHHHhhcc
Q psy2266 153 AETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
|+..+++|+.|++.++++++|+|
T Consensus 110 ~~~~~~~n~~~~~~l~~~~~~~~ 132 (252)
T PRK07035 110 FQKTVDVNIRGYFFMSVEAGKLM 132 (252)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHH
Confidence 89999999999999999999976
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0014 Score=62.35 Aligned_cols=129 Identities=12% Similarity=0.075 Sum_probs=79.8
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhccc------
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLR------ 83 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~------ 83 (313)
++.++.+|++|.++++++++. .++|+|||+||..... ...+.++..+++|+.+++.+++++.+.|.
T Consensus 52 ~~~~~~~Dl~d~~~~~~~~~~-----~~~D~Vih~A~~~~~~---~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~ 123 (355)
T PRK10217 52 RFAFEKVDICDRAELARVFTE-----HQPDCVMHLAAESHVD---RSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDK 123 (355)
T ss_pred ceEEEECCCcChHHHHHHHhh-----cCCCEEEECCcccCcc---hhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccc
Confidence 466789999999988887764 3699999999975321 11256788999999999999999987542
Q ss_pred C-CceEEEEecccccccCC-Cchhhhhh----hc-ccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC
Q psy2266 84 P-HARVVNVASKLGMLYNV-PSQELRQT----LF-NESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP 146 (313)
Q Consensus 84 ~-~g~IV~isS~~~~~~~~-~~~~~~~~----~~-~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~ 146 (313)
+ ..++|++||....-... ....+.+. .. ....++-..+.++..+.+.+|---+++...-.+.+
T Consensus 124 ~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp 193 (355)
T PRK10217 124 KSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGP 193 (355)
T ss_pred cCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCC
Confidence 2 25899998865322100 00001111 11 12234555667777777777633334444333333
|
|
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00067 Score=64.04 Aligned_cols=160 Identities=14% Similarity=0.136 Sum_probs=98.9
Q ss_pred HHHHhcccCCceEEEEecccccccCCCchhhhhh--hc-ccCCCHHHHHHHHHHHHHHcCCc--------------c-EE
Q psy2266 76 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQT--LF-NESLTEDQLLDMMTDYVQYNGPL--------------D-KI 137 (313)
Q Consensus 76 ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~--~~-~d~~~~~~~~~~~~~~~~~~G~l--------------D-~L 137 (313)
|..+-=|.+.|-||+++.........-.++-+.. .+ -|..++......+..+.+..... . ++
T Consensus 18 R~la~DLeRRGFIV~v~~~~~ed~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p~~~~~~h~l~L~svi 97 (299)
T PF08643_consen 18 RSLALDLERRGFIVYVTVSSAEDEKYVESEDRPDIRPLWLDDSDPSSIHASLSRFASLLSRPHVPFPGAPPHHLQLKSVI 97 (299)
T ss_pred HHHHHHHhhCCeEEEEEeCCHHHHHHHHhccCCCCCCcccCCCCCcchHHHHHHHHHHhcCCCCCCCCCCCceeEEEEEE
Confidence 3333334557888888877666433322222222 22 23344555555555555554422 1 23
Q ss_pred EeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhhcccC----CCceEEecCCccccccccChhhhhhhhccccc
Q psy2266 138 LDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFPLLRP----HARVVNVASKLGMLYNVPSQELRQTLFNESLT 209 (313)
Q Consensus 138 inna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~----~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~ 209 (313)
+-.-.-+..+|.. +.|..++++|+.-++.+++.++|+|+. +.+||.++........
T Consensus 98 ~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~---------------- 161 (299)
T PF08643_consen 98 FIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLN---------------- 161 (299)
T ss_pred EecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccC----------------
Confidence 3333446666653 789999999999999999999999976 4777777655432211
Q ss_pred hHHHHHHHHHHHHHhhhcccccCCCCCCc-hhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccc
Q psy2266 210 EDQLLDMMTDYVQLAKEGKDKEAGWPEFS-YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD 279 (313)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~ 279 (313)
.+.++ -.....++..++..|.+|+.. .||.|..|.-|.++-.
T Consensus 162 ------------------------~PfhspE~~~~~al~~~~~~LrrEl~~----~~I~V~~i~LG~l~i~ 204 (299)
T PF08643_consen 162 ------------------------PPFHSPESIVSSALSSFFTSLRRELRP----HNIDVTQIKLGNLDIG 204 (299)
T ss_pred ------------------------CCccCHHHHHHHHHHHHHHHHHHHhhh----cCCceEEEEeeeeccc
Confidence 12222 456667788888777777664 4999999999988655
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00015 Score=65.53 Aligned_cols=159 Identities=16% Similarity=0.144 Sum_probs=119.7
Q ss_pred HHHhcc-cCCceEEEEecccccccCCCch-hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CCCc---
Q psy2266 77 ILFPLL-RPHARVVNVASKLGMLYNVPSQ-ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PGSF--- 149 (313)
Q Consensus 77 a~~~~m-~~~g~IV~isS~~~~~~~~~~~-~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~~~--- 149 (313)
++++.+ ++|.+|+.+++........... +.+ ....+|..+.++++++++.+.+++|++|++++|||... ..++
T Consensus 15 ~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~ 94 (248)
T PRK10538 15 CITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKA 94 (248)
T ss_pred HHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccC
Confidence 344434 4567887777654332221111 001 12467888999999999999999999999999999753 2332
Q ss_pred -chhhhhhhhcccccHHHHHHHHhhcccC--CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhh
Q psy2266 150 -GQRAETTLATNFFALVTVCHILFPLLRP--HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKE 226 (313)
Q Consensus 150 -~~~~~~~~~~N~~g~~~~~~~~~p~l~~--~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (313)
.++|+.++++|+.|++.+++.++|.|++ .++||++||..+...
T Consensus 95 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------------------------------- 140 (248)
T PRK10538 95 SVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP---------------------------------- 140 (248)
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC----------------------------------
Confidence 4788999999999999999999999965 378999999876541
Q ss_pred cccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccc
Q psy2266 227 GKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD 279 (313)
Q Consensus 227 ~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~ 279 (313)
..+...|+.+|+++.++++.++.++... ||++|+|+||++.|+
T Consensus 141 ------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~----~i~v~~v~pg~i~~~ 183 (248)
T PRK10538 141 ------YAGGNVYGATKAFVRQFSLNLRTDLHGT----AVRVTDIEPGLVGGT 183 (248)
T ss_pred ------CCCCchhHHHHHHHHHHHHHHHHHhcCC----CcEEEEEeCCeeccc
Confidence 2233569999999999998888887655 999999999999844
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00022 Score=64.42 Aligned_cols=170 Identities=15% Similarity=0.190 Sum_probs=119.8
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhh-------hhh-hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQEL-------RQT-LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP 146 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~-------~~~-~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~ 146 (313)
+++++.+ +++.+++.+++........ ...+ ... ..+|..+++++.++++.+.+.+|++|++|||||....
T Consensus 18 ~~~a~~l~~~g~~v~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~ 96 (256)
T PRK09186 18 SALVKAILEAGGIVIAADIDKEALNEL-LESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNK 96 (256)
T ss_pred HHHHHHHHHCCCEEEEEecChHHHHHH-HHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCccccc
Confidence 3444444 4467887776544332111 0111 112 3678889999999999999999999999999976432
Q ss_pred ---CCc----chhhhhhhhcccccHHHHHHHHhhcccC--CCceEEecCCccccccccChhhhhhhhccccchHHHHHHH
Q psy2266 147 ---GSF----GQRAETTLATNFFALVTVCHILFPLLRP--HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMM 217 (313)
Q Consensus 147 ---~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~--~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (313)
.++ .+.|..++++|+.+++.++++++|.|++ .++||++||..+.... .. . ...
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~~-~-----~~~----------- 158 (256)
T PRK09186 97 DYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAP-KF-E-----IYE----------- 158 (256)
T ss_pred cccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccc-cc-h-----hcc-----------
Confidence 222 3678899999999999999999999964 4899999998775311 00 0 000
Q ss_pred HHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 218 TDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
.. .......|++||+++..+++.++.++.+. ||+||.|+||++.|+.
T Consensus 159 ----------~~--~~~~~~~Y~~sK~a~~~l~~~la~e~~~~----~i~v~~i~Pg~~~~~~ 205 (256)
T PRK09186 159 ----------GT--SMTSPVEYAAIKAGIIHLTKYLAKYFKDS----NIRVNCVSPGGILDNQ 205 (256)
T ss_pred ----------cc--ccCCcchhHHHHHHHHHHHHHHHHHhCcC----CeEEEEEecccccCCC
Confidence 00 01112359999999999999988887655 9999999999998764
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00019 Score=64.39 Aligned_cols=90 Identities=17% Similarity=0.152 Sum_probs=68.2
Q ss_pred cCCceEEEEecccccccCCCchhh-----hhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-CCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----RQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-GSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~~~----~~~ 152 (313)
+.+.+|+.+++......... ..+ ...+.+|..++++++.+++.+.++++++|++|+|||.... .++ .++
T Consensus 27 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~ 105 (251)
T PRK07231 27 AEGARVVVTDRNEEAAERVA-AEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAE 105 (251)
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHH
Confidence 44678887777654332221 111 1235678889999999999999999999999999998543 333 378
Q ss_pred hhhhhhcccccHHHHHHHHhh
Q psy2266 153 AETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p 173 (313)
|+.++++|+.|++.+++.++|
T Consensus 106 ~~~~~~~n~~~~~~l~~~~~~ 126 (251)
T PRK07231 106 FDRIFAVNVKSPYLWTQAAVP 126 (251)
T ss_pred HHHHHhhhhHHHHHHHHHHHH
Confidence 999999999999999999998
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00032 Score=63.53 Aligned_cols=64 Identities=16% Similarity=0.188 Sum_probs=56.3
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc---hhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG---QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~---~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..++++++..++.+.+.+|++|++++|||.....++. ++|+..+++|+.+++.+++.++|
T Consensus 60 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 126 (258)
T PRK08628 60 VQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLP 126 (258)
T ss_pred EEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 56788899999999999999999999999999976544432 78999999999999999999998
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00023 Score=64.34 Aligned_cols=66 Identities=9% Similarity=0.074 Sum_probs=58.9
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..++++++.+++.+.+.++++|++++|||.....++. ++|+.++++|+.|++.+++.+.|.|
T Consensus 66 ~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 135 (255)
T PRK06841 66 LVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHM 135 (255)
T ss_pred EEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHH
Confidence 46788899999999999999999999999999987666653 6888999999999999999999966
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00024 Score=63.78 Aligned_cols=65 Identities=15% Similarity=0.076 Sum_probs=58.2
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 111 FNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 111 ~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
.+|..+.+++.++++.+.+.+|++|+++||||.....++ .++|+.++++|+.|++.+++.++|.|
T Consensus 59 ~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 127 (246)
T PRK12938 59 EGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGM 127 (246)
T ss_pred EcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 578889999999999999999999999999998765554 36899999999999999999999966
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00023 Score=64.10 Aligned_cols=80 Identities=11% Similarity=0.025 Sum_probs=54.0
Q ss_pred cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETT 156 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~ 156 (313)
+++.+++.+++......... .++ + ....+|..+++++.++++.+.+.+|++|++++|||.....++.+.....
T Consensus 26 ~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~ 104 (258)
T PRK12429 26 KEGAKVVIADLNDEAAAAAA-EALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEK 104 (258)
T ss_pred HCCCeEEEEeCCHHHHHHHH-HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHH
Confidence 34678888877654432221 111 1 2356788899999999999999999999999999987666654443444
Q ss_pred hhccccc
Q psy2266 157 LATNFFA 163 (313)
Q Consensus 157 ~~~N~~g 163 (313)
++..+..
T Consensus 105 ~~~~~~~ 111 (258)
T PRK12429 105 WKKMIAI 111 (258)
T ss_pred HHHHHhh
Confidence 4444433
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00021 Score=64.18 Aligned_cols=68 Identities=15% Similarity=0.147 Sum_probs=59.0
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC-Cc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG-SF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~-~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
..+|..+.++++++++.+.+.+|++|++|||||..... ++ .++|+.++++|+.|++.++++++|.|++
T Consensus 57 ~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 129 (248)
T PRK06123 57 VAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMST 129 (248)
T ss_pred EEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 45688899999999999999999999999999986432 33 3688899999999999999999998864
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0002 Score=65.16 Aligned_cols=94 Identities=13% Similarity=0.139 Sum_probs=68.2
Q ss_pred CCceEEEEecccccccCCCchhhh--------hhhcccCCCHHHHHHHHHHHHHHcCCc----cEEEeccCcCCCC--Cc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELR--------QTLFNESLTEDQLLDMMTDYVQYNGPL----DKILDTAMDTAPG--SF 149 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~--------~~~~~d~~~~~~~~~~~~~~~~~~G~l----D~Linna~~~~~~--~~ 149 (313)
++.+|+.+++........ ..++. ....+|..+.++++++++.+.+.+|.+ |+||||||..... .+
T Consensus 27 ~g~~V~~~~r~~~~~~~~-~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~ 105 (256)
T TIGR01500 27 PGSVLVLSARNDEALRQL-KAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGF 105 (256)
T ss_pred CCcEEEEEEcCHHHHHHH-HHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEEEeCCcccCcccccc
Confidence 466777776654332221 11111 124568889999999999999988864 6999999975432 12
Q ss_pred -----chhhhhhhhcccccHHHHHHHHhhcccCC
Q psy2266 150 -----GQRAETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 150 -----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
.++|+.++++|+.|++.+++.++|.|++.
T Consensus 106 ~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~ 139 (256)
T TIGR01500 106 VDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDS 139 (256)
T ss_pred ccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhc
Confidence 36789999999999999999999999764
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00023 Score=64.71 Aligned_cols=126 Identities=19% Similarity=0.139 Sum_probs=105.1
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccC--CCceEE
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRP--HARVVN 183 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~--~g~iv~ 183 (313)
..+|..+.+++.++++.+.+.+|++|++++|||.....++ .++|+.++++|+.|++.+++.++|.|++ +++|++
T Consensus 64 ~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~ 143 (258)
T PRK09134 64 LQADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVN 143 (258)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEE
Confidence 4568889999999999999999999999999998766554 3688999999999999999999999865 489999
Q ss_pred ecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCC
Q psy2266 184 VASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRR 263 (313)
Q Consensus 184 vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~ 263 (313)
++|..+..+ .+....|++||+++..+++.++.++..
T Consensus 144 ~~s~~~~~~----------------------------------------~p~~~~Y~~sK~a~~~~~~~la~~~~~---- 179 (258)
T PRK09134 144 MIDQRVWNL----------------------------------------NPDFLSYTLSKAALWTATRTLAQALAP---- 179 (258)
T ss_pred ECchhhcCC----------------------------------------CCCchHHHHHHHHHHHHHHHHHHHhcC----
Confidence 988765431 122246999999999999888887643
Q ss_pred CCeEEEeeccccccccc
Q psy2266 264 PDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 264 ~gI~vn~v~PG~v~T~~ 280 (313)
+|+|++|+||++.|+.
T Consensus 180 -~i~v~~i~PG~v~t~~ 195 (258)
T PRK09134 180 -RIRVNAIGPGPTLPSG 195 (258)
T ss_pred -CcEEEEeecccccCCc
Confidence 4999999999998865
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00028 Score=64.16 Aligned_cols=92 Identities=13% Similarity=0.204 Sum_probs=68.9
Q ss_pred cCCceEEEEecccccccCCCch----hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQ----ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRA 153 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~----~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~ 153 (313)
++|.+|+.+++... ..+.... +.+ ....+|..++++++++++.+.+.+|++|++++|||.....++ .++|
T Consensus 28 ~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~ 106 (263)
T PRK08226 28 RHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDR 106 (263)
T ss_pred HCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHH
Confidence 45778877766532 1111000 001 124678889999999999999999999999999998766554 3678
Q ss_pred hhhhhcccccHHHHHHHHhhcc
Q psy2266 154 ETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+.++++|+.|++.+++.++|.|
T Consensus 107 ~~~~~~n~~~~~~~~~~~~~~~ 128 (263)
T PRK08226 107 DFHIDINIKGVWNVTKAVLPEM 128 (263)
T ss_pred HHHHhhhhHHHHHHHHHHHHHH
Confidence 8899999999999999999965
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00024 Score=63.67 Aligned_cols=90 Identities=13% Similarity=0.082 Sum_probs=67.8
Q ss_pred cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
+++.+++.+++......+.. ..+ + ..+.+|..++++++++++.+.+.+|++|++++|||.....++ .++
T Consensus 29 ~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~ 107 (250)
T PRK12939 29 EAGATVAFNDGLAAEARELA-AALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDT 107 (250)
T ss_pred HcCCEEEEEeCCHHHHHHHH-HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHH
Confidence 45678877765433222111 111 1 224568889999999999999999999999999998766554 367
Q ss_pred hhhhhhcccccHHHHHHHHhh
Q psy2266 153 AETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p 173 (313)
|+.++++|+.|++.+++++.|
T Consensus 108 ~~~~~~~n~~~~~~l~~~~~~ 128 (250)
T PRK12939 108 WDAVMNVNVRGTFLMLRAALP 128 (250)
T ss_pred HHHHHHHhhHHHHHHHHHHHH
Confidence 899999999999999999988
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00018 Score=71.24 Aligned_cols=63 Identities=21% Similarity=0.250 Sum_probs=55.6
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILF 172 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~ 172 (313)
..+|..+.++++.+++.+.+.+|++|++|||||....+++ .+.|+.++++|+.|++.+++++.
T Consensus 261 ~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~ 327 (450)
T PRK08261 261 LALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALL 327 (450)
T ss_pred EEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 4568889999999999999999999999999998876654 37899999999999999988864
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0017 Score=61.74 Aligned_cols=130 Identities=11% Similarity=0.068 Sum_probs=80.1
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccC----
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP---- 84 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~---- 84 (313)
.++.++.+|++|.+++.++++. .++|++||+||...... .....+..+++|+.++..+++++.+.|+.
T Consensus 50 ~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~~~---~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~ 121 (352)
T PRK10084 50 ERYVFEHADICDRAELDRIFAQ-----HQPDAVMHLAAESHVDR---SITGPAAFIETNIVGTYVLLEAARNYWSALDED 121 (352)
T ss_pred CceEEEEecCCCHHHHHHHHHh-----cCCCEEEECCcccCCcc---hhcCchhhhhhhhHHHHHHHHHHHHhccccccc
Confidence 3467789999999998887764 37999999999754221 11234668999999999999999887632
Q ss_pred ---CceEEEEecccccccCC-Cc--------hhhhhh----hc-ccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC
Q psy2266 85 ---HARVVNVASKLGMLYNV-PS--------QELRQT----LF-NESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP 146 (313)
Q Consensus 85 ---~g~IV~isS~~~~~~~~-~~--------~~~~~~----~~-~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~ 146 (313)
..++|++||....-... +. ....+. .. ....++...+.++..+.+.+|---+++.....+.+
T Consensus 122 ~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp 200 (352)
T PRK10084 122 KKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGP 200 (352)
T ss_pred cccceeEEEecchhhcCCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCC
Confidence 24899998864332100 00 001111 11 12234555666777777777633344444444443
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00022 Score=64.67 Aligned_cols=66 Identities=18% Similarity=0.302 Sum_probs=57.4
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CCCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PGSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..+.+++.++++.+.+.+|++|+++||||... ..++ .++|+..+++|+.|++++++.++|.|
T Consensus 61 ~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 131 (260)
T PRK12823 61 LTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHM 131 (260)
T ss_pred EEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 456888999999999999999999999999999653 3443 36899999999999999999999966
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00026 Score=64.29 Aligned_cols=92 Identities=16% Similarity=0.112 Sum_probs=68.9
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
+++.+++.+.+........ ...+. ..+.+|..++++++++++.+.++++++|++++|||.....++ .+.
T Consensus 34 ~~G~~V~~~~r~~~~~~~~-~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~ 112 (259)
T PRK08213 34 EAGARVVLSARKAEELEEA-AAHLEALGIDALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEA 112 (259)
T ss_pred HcCCEEEEEeCCHHHHHHH-HHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHH
Confidence 3566777776654332211 11111 125678889999999999999999999999999998655443 368
Q ss_pred hhhhhhcccccHHHHHHHHhhcc
Q psy2266 153 AETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
|+.++++|+.|++.+++++.|.+
T Consensus 113 ~~~~~~~n~~~~~~l~~~~~~~~ 135 (259)
T PRK08213 113 WDKVMNLNVRGLFLLSQAVAKRS 135 (259)
T ss_pred HHHHHhHHhHHHHHHHHHHHHHH
Confidence 89999999999999999999963
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00028 Score=63.95 Aligned_cols=70 Identities=16% Similarity=0.130 Sum_probs=61.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
..+|..+++++.++++.+.+++|++|++++|||....+++ .+.|+.++++|+.|++.+++.++|.|++.+
T Consensus 61 ~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 134 (260)
T PRK06198 61 VQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRK 134 (260)
T ss_pred EEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 4568889999999999999999999999999998765543 367889999999999999999999998643
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00043 Score=61.92 Aligned_cols=129 Identities=21% Similarity=0.219 Sum_probs=106.9
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccC-CCceEEe
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRP-HARVVNV 184 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~-~g~iv~v 184 (313)
+.+|..+.+++..+++.+.+.+|++|++++|||.....++ .++++.++++|+.|++.+.+++.|+|.+ ++.++++
T Consensus 62 ~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~ 141 (249)
T PRK09135 62 LQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNI 141 (249)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEE
Confidence 4568889999999999999999999999999998665553 3678999999999999999999999865 5788887
Q ss_pred cCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCC
Q psy2266 185 ASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRP 264 (313)
Q Consensus 185 ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~ 264 (313)
+|..+.. +..+..+|++||+++..+++.+++++..
T Consensus 142 ~~~~~~~----------------------------------------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~----- 176 (249)
T PRK09135 142 TDIHAER----------------------------------------PLKGYPVYCAAKAALEMLTRSLALELAP----- 176 (249)
T ss_pred eChhhcC----------------------------------------CCCCchhHHHHHHHHHHHHHHHHHHHCC-----
Confidence 7755432 1234456999999999999888887642
Q ss_pred CeEEEeecccccccccccc
Q psy2266 265 DIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 265 gI~vn~v~PG~v~T~~~~~ 283 (313)
+|++++|.||++.||+...
T Consensus 177 ~i~~~~v~pg~~~~~~~~~ 195 (249)
T PRK09135 177 EVRVNAVAPGAILWPEDGN 195 (249)
T ss_pred CCeEEEEEeccccCccccc
Confidence 6999999999999998643
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00035 Score=62.29 Aligned_cols=66 Identities=14% Similarity=0.153 Sum_probs=58.1
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..+++++.++++.+.+.+|++|++++|||.....++ .++|+.++++|+.+++.+++.++|.|
T Consensus 55 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 124 (242)
T TIGR01829 55 VEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGM 124 (242)
T ss_pred EEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4567789999999999999999999999999998765554 36789999999999999999999966
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00035 Score=62.87 Aligned_cols=66 Identities=15% Similarity=0.099 Sum_probs=58.6
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..+++++..+++.+.+.+|++|+++||||.....++ .++|+.++++|+.|++.++++++|.|
T Consensus 59 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 128 (250)
T PRK08063 59 VKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLM 128 (250)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4578889999999999999999999999999998665664 36788899999999999999999976
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00029 Score=63.14 Aligned_cols=92 Identities=14% Similarity=0.179 Sum_probs=69.0
Q ss_pred cCCceEEEEecccccccCCCchhh-----hh-hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----RQ-TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~~-~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
.++..|+.+++......+.. +++ +. ...+|..+++++.++++.+.++++++|++++|||....+++ .++
T Consensus 29 ~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~ 107 (239)
T PRK07666 29 KEGVNVGLLARTEENLKAVA-EEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAE 107 (239)
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHH
Confidence 45678887776543322211 111 11 23567789999999999999999999999999998765544 367
Q ss_pred hhhhhhcccccHHHHHHHHhhcc
Q psy2266 153 AETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
|+.++++|+.|++.+++++.|.|
T Consensus 108 ~~~~~~~n~~~~~~l~~~~~~~~ 130 (239)
T PRK07666 108 WEKIIQVNLMGVYYATRAVLPSM 130 (239)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHH
Confidence 89999999999999999999855
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00028 Score=64.18 Aligned_cols=87 Identities=11% Similarity=0.178 Sum_probs=62.4
Q ss_pred CCceEEEEecccccccCCCchhh------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 84 PHARVVNVASKLGMLYNVPSQEL------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
.+.+|+.+++......... +.+ + +...+|..++++++++++ .+|++|++++|||....+++ .++
T Consensus 30 ~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~~D~~~~~~~~~~~~----~~g~id~lv~~ag~~~~~~~~~~~~~~ 104 (259)
T PRK06125 30 EGCHLHLVARDADALEALA-ADLRAAHGVDVAVHALDLSSPEAREQLAA----EAGDIDILVNNAGAIPGGGLDDVDDAA 104 (259)
T ss_pred cCCEEEEEeCCHHHHHHHH-HHHHhhcCCceEEEEecCCCHHHHHHHHH----HhCCCCEEEECCCCCCCCCcccCCHHH
Confidence 4667777766543322211 111 1 123567778888877764 57999999999998765554 378
Q ss_pred hhhhhhcccccHHHHHHHHhhcc
Q psy2266 153 AETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
|+.++++|+.|++.++++++|.|
T Consensus 105 ~~~~~~~n~~~~~~~~~~~~~~~ 127 (259)
T PRK06125 105 WRAGWELKVFGYIDLTRLAYPRM 127 (259)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999999999999976
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00088 Score=63.61 Aligned_cols=116 Identities=15% Similarity=0.028 Sum_probs=74.9
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCc--
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHA-- 86 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g-- 86 (313)
.++.++.+|++|.+++.++++.+ .+|+||||||..... ...+.....+++|+.++..+++++.+.+.+.+
T Consensus 60 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~~---~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~ 131 (340)
T PLN02653 60 ARMKLHYGDLSDASSLRRWLDDI-----KPDEVYNLAAQSHVA---VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQ 131 (340)
T ss_pred CceEEEEecCCCHHHHHHHHHHc-----CCCEEEECCcccchh---hhhhChhHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 45788899999999988877754 499999999985432 11134567778999999999999998876544
Q ss_pred -eEEEEecccccccCC-Cchhhhh-hhc-ccCCCHHHHHHHHHHHHHHcC
Q psy2266 87 -RVVNVASKLGMLYNV-PSQELRQ-TLF-NESLTEDQLLDMMTDYVQYNG 132 (313)
Q Consensus 87 -~IV~isS~~~~~~~~-~~~~~~~-~~~-~d~~~~~~~~~~~~~~~~~~G 132 (313)
++|++||....-... +.++-.. ... ....++...+.++..+.+.+|
T Consensus 132 ~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~ 181 (340)
T PLN02653 132 IKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYG 181 (340)
T ss_pred eeEEEeccHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcC
Confidence 677887753221111 1111000 011 122344556666777777776
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00027 Score=64.37 Aligned_cols=98 Identities=18% Similarity=0.185 Sum_probs=69.9
Q ss_pred HHHhcc-cCCceEEEEecccccccCCCch----hhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc--
Q psy2266 77 ILFPLL-RPHARVVNVASKLGMLYNVPSQ----ELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF-- 149 (313)
Q Consensus 77 a~~~~m-~~~g~IV~isS~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~-- 149 (313)
.++..+ ++|..|+.+++......+.... ..-....+|..+.++++++.+.+.+ +|++|++++|||.....++
T Consensus 20 ~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~id~lv~~ag~~~~~~~~~ 98 (263)
T PRK09072 20 ALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE-MGGINVLINNAGVNHFALLED 98 (263)
T ss_pred HHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh-cCCCCEEEECCCCCCcccccc
Confidence 333333 4577877777654333221100 0111246788899999999888876 8999999999998765554
Q ss_pred --chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 150 --GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 150 --~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
.++++.++++|+.|++.+++.++|+|
T Consensus 99 ~~~~~~~~~~~~n~~g~~~l~~~~~~~~ 126 (263)
T PRK09072 99 QDPEAIERLLALNLTAPMQLTRALLPLL 126 (263)
T ss_pred CCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 36788999999999999999999976
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00052 Score=61.96 Aligned_cols=68 Identities=12% Similarity=0.067 Sum_probs=59.3
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC--CCc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP--GSF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~--~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
..+|..+++++..+++.+.+.+|++|++++|||.... +++ .++|+.++++|+.|++.+++++.|.|++
T Consensus 57 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 130 (256)
T PRK12745 57 FPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLA 130 (256)
T ss_pred EEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHh
Confidence 4678889999999999999999999999999998532 333 3688999999999999999999999975
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00037 Score=64.24 Aligned_cols=64 Identities=13% Similarity=0.203 Sum_probs=56.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..+.+++.++++.+.+.+|++|++|+|||.....++ .+.++.++++|+.|++.++++++|
T Consensus 64 ~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~ 131 (274)
T PRK07775 64 FPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLP 131 (274)
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3568889999999999999999999999999998765554 267889999999999999999887
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00031 Score=64.54 Aligned_cols=92 Identities=14% Similarity=0.172 Sum_probs=68.7
Q ss_pred cCCceEEEEecccccccCCCch----h---hhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----h
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQ----E---LRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----Q 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~----~---~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~ 151 (313)
++|..|+.+++........... + .-+...+|..+++++++ ++.+.+.+|++|++++|||....+++. +
T Consensus 25 ~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~ 103 (280)
T PRK06914 25 KKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVE 103 (280)
T ss_pred hCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeEEEECCcccccCccccCCHH
Confidence 4567888776654322111100 0 01224568889999999 999999999999999999988766543 6
Q ss_pred hhhhhhhcccccHHHHHHHHhhcc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+++..+++|+.|++.+++.++|.|
T Consensus 104 ~~~~~~~~n~~~~~~l~~~~~~~~ 127 (280)
T PRK06914 104 EYRKQFETNVFGAISVTQAVLPYM 127 (280)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHH
Confidence 788999999999999999999976
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00039 Score=62.40 Aligned_cols=92 Identities=18% Similarity=0.194 Sum_probs=68.5
Q ss_pred cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
+++..|+.+++......... +.+ + ....+|..+.++++++++.+.++++++|++|+|||.....++ .++
T Consensus 25 ~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~ 103 (250)
T TIGR03206 25 EEGAKVAVFDLNREAAEKVA-ADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPL 103 (250)
T ss_pred HCCCEEEEecCCHHHHHHHH-HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHH
Confidence 44667777765443222111 111 1 124667789999999999999999999999999998655554 367
Q ss_pred hhhhhhcccccHHHHHHHHhhcc
Q psy2266 153 AETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
|+.++++|+.+++.+++.++|.|
T Consensus 104 ~~~~~~~n~~~~~~l~~~~~~~~ 126 (250)
T TIGR03206 104 WERLIAINLTGALHMHHAVLPGM 126 (250)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHH
Confidence 88999999999999999999966
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0021 Score=60.61 Aligned_cols=76 Identities=11% Similarity=0.064 Sum_probs=43.5
Q ss_pred CceeEEEeecCCHHH-H-HHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 9 NNVRFHQLDILDQSS-I-HKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~-v-~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
.++.++.+|++++.. + ....+.+ ..++|++|||||..... ..++...++|+.++..+++++... ...
T Consensus 61 ~~v~~~~~D~~~~~~gl~~~~~~~~---~~~~d~vih~a~~~~~~------~~~~~~~~~nv~g~~~ll~~a~~~--~~~ 129 (367)
T TIGR01746 61 ERIEVVAGDLSEPRLGLSDAEWERL---AENVDTIVHNGALVNWV------YPYSELRAANVLGTREVLRLAASG--RAK 129 (367)
T ss_pred CCEEEEeCCcCcccCCcCHHHHHHH---HhhCCEEEeCCcEeccC------CcHHHHhhhhhHHHHHHHHHHhhC--CCc
Confidence 367888899876531 0 0111222 24699999999875421 224556677888887777765432 112
Q ss_pred eEEEEeccc
Q psy2266 87 RVVNVASKL 95 (313)
Q Consensus 87 ~IV~isS~~ 95 (313)
++|++||..
T Consensus 130 ~~v~iSS~~ 138 (367)
T TIGR01746 130 PLHYVSTIS 138 (367)
T ss_pred eEEEEcccc
Confidence 355555543
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00045 Score=62.70 Aligned_cols=64 Identities=8% Similarity=0.005 Sum_probs=56.7
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..+.+++.++++.+.+.+|++|++++|||.....++. ++++..+++|+.|++.++++++|
T Consensus 72 ~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 139 (256)
T PRK12748 72 MEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAK 139 (256)
T ss_pred EECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46688899999999999999999999999999987665542 67889999999999999999887
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0004 Score=71.74 Aligned_cols=66 Identities=20% Similarity=0.240 Sum_probs=57.6
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc------chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF------GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~------~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..+.++++++++.+.+.+|++|+++||||....+++ .++++.++++|+.|++.+++.++|.|
T Consensus 425 ~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 496 (657)
T PRK07201 425 YTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHM 496 (657)
T ss_pred EEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4568889999999999999999999999999998644433 25788999999999999999999976
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00052 Score=61.33 Aligned_cols=64 Identities=19% Similarity=0.262 Sum_probs=57.0
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..+.+++.++++.+.+++|++|++++|||.....++ .++|+.++++|+.|++.+++.++|
T Consensus 57 ~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 124 (245)
T PRK12824 57 KELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFA 124 (245)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4567789999999999999999999999999998765543 478999999999999999999998
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00048 Score=62.57 Aligned_cols=91 Identities=18% Similarity=0.177 Sum_probs=66.6
Q ss_pred cCCceEEEEecccccccCCCch----hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc-----hh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQ----ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG-----QR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~----~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~-----~~ 152 (313)
+++..|+.+++........... +.+ ....+|..+.+++.++++.+.+++|++|++++|||....+++. +.
T Consensus 23 ~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~ 102 (263)
T PRK06181 23 RAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSV 102 (263)
T ss_pred HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHH
Confidence 4467777776643322111000 001 1246688899999999999999999999999999987665543 45
Q ss_pred hhhhhhcccccHHHHHHHHhh
Q psy2266 153 AETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p 173 (313)
+...+++|+.|++.+++.++|
T Consensus 103 ~~~~~~~N~~~~~~l~~~~~~ 123 (263)
T PRK06181 103 FERVMRVNYLGAVYCTHAALP 123 (263)
T ss_pred HHHHHHHhhHHHHHHHHHHHH
Confidence 788999999999999999987
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00035 Score=73.14 Aligned_cols=126 Identities=23% Similarity=0.178 Sum_probs=108.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccC---CCceE
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRP---HARVV 182 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~---~g~iv 182 (313)
..+|..+.++++++++.+.+++|++|++|||||.....++ .++|+.++++|+.|++.+++.++|.|++ +|+||
T Consensus 470 v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV 549 (676)
T TIGR02632 470 LKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIV 549 (676)
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 4568889999999999999999999999999998765654 3689999999999999999999999965 36899
Q ss_pred EecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCC
Q psy2266 183 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKR 262 (313)
Q Consensus 183 ~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~ 262 (313)
++||..+... ..+..+|++||+++..+++.++.++...
T Consensus 550 ~iSS~~a~~~----------------------------------------~~~~~aY~aSKaA~~~l~r~lA~el~~~-- 587 (676)
T TIGR02632 550 FIASKNAVYA----------------------------------------GKNASAYSAAKAAEAHLARCLAAEGGTY-- 587 (676)
T ss_pred EEeChhhcCC----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHhccc--
Confidence 9999887541 2334569999999999999988888765
Q ss_pred CCCeEEEeecccccccc
Q psy2266 263 RPDIIVNPVHPGYVNTD 279 (313)
Q Consensus 263 ~~gI~vn~v~PG~v~T~ 279 (313)
||+||+|+||+|.|+
T Consensus 588 --gIrVn~V~Pg~V~~~ 602 (676)
T TIGR02632 588 --GIRVNTVNPDAVLQG 602 (676)
T ss_pred --CeEEEEEECCceecC
Confidence 999999999999653
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00052 Score=62.14 Aligned_cols=157 Identities=22% Similarity=0.187 Sum_probs=119.1
Q ss_pred cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcC-CCCCc----chhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDT-APGSF----GQRAE 154 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~-~~~~~----~~~~~ 154 (313)
+++..|+.+++......+......+ ....+|..+++++..+++.+.+.++++|++++|||.. ...++ .++|+
T Consensus 33 ~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~ 112 (264)
T PRK12829 33 EAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWE 112 (264)
T ss_pred HCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHH
Confidence 3467777777654332221111111 2246688899999999999999999999999999987 33332 47899
Q ss_pred hhhhcccccHHHHHHHHhhcccCC---CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhccccc
Q psy2266 155 TTLATNFFALVTVCHILFPLLRPH---ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKE 231 (313)
Q Consensus 155 ~~~~~N~~g~~~~~~~~~p~l~~~---g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (313)
.++++|+.|++.+++.++|.|++. ++|+++||..+...
T Consensus 113 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~--------------------------------------- 153 (264)
T PRK12829 113 QTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG--------------------------------------- 153 (264)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccC---------------------------------------
Confidence 999999999999999999988653 56888888776541
Q ss_pred CCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 232 AGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 232 ~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+...|+.+|+++..+++.++.++... +|+++++.||++.|++...
T Consensus 154 -~~~~~~y~~~K~a~~~~~~~l~~~~~~~----~i~~~~l~pg~v~~~~~~~ 200 (264)
T PRK12829 154 -YPGRTPYAASKWAVVGLVKSLAIELGPL----GIRVNAILPGIVRGPRMRR 200 (264)
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCCcCChHHHH
Confidence 2233469999999999999988887655 8999999999999998654
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00066 Score=61.04 Aligned_cols=64 Identities=11% Similarity=0.156 Sum_probs=54.0
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCC-ccEEEeccCcCC------CCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGP-LDKILDTAMDTA------PGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~-lD~Linna~~~~------~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..+.++++++++.+.+.+|. +|+++||||... ..++ .++|+.++++|+.|++.+++.++|
T Consensus 57 ~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 131 (253)
T PRK08642 57 LQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALP 131 (253)
T ss_pred EEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 456778999999999999999997 999999998631 1222 367899999999999999999998
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0032 Score=59.19 Aligned_cols=65 Identities=20% Similarity=0.132 Sum_probs=43.0
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCCChhHHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFGQRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
.+..+++.|+.|.+.+.++++. + .+|++||-|.-+-.. .+... +.-+++|+.|++.|+.++....
T Consensus 51 ~~~~fv~~DI~D~~~v~~~~~~----~-~~D~VvhfAAESHVDRSI~~P----~~Fi~TNv~GT~~LLEaar~~~ 116 (340)
T COG1088 51 PRYRFVQGDICDRELVDRLFKE----Y-QPDAVVHFAAESHVDRSIDGP----APFIQTNVVGTYTLLEAARKYW 116 (340)
T ss_pred CCceEEeccccCHHHHHHHHHh----c-CCCeEEEechhccccccccCh----hhhhhcchHHHHHHHHHHHHhc
Confidence 4678899999998887776653 2 699999988765422 22222 2345566677766666665544
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00053 Score=61.12 Aligned_cols=90 Identities=17% Similarity=0.092 Sum_probs=66.9
Q ss_pred cCCceEEEEecccccccCCCchhh----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRA 153 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~ 153 (313)
+.+..|+.+++........ .+.+ + +.+.+|..+.+++.++++.+.+.+|++|+++||||....+++ .+++
T Consensus 28 ~~g~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~ 106 (237)
T PRK07326 28 AEGYKVAITARDQKELEEA-AAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEW 106 (237)
T ss_pred HCCCEEEEeeCCHHHHHHH-HHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHH
Confidence 3466777776544332211 1111 1 224567789999999999999999999999999998765554 3678
Q ss_pred hhhhhcccccHHHHHHHHhh
Q psy2266 154 ETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p 173 (313)
+..+++|+.|++.++++++|
T Consensus 107 ~~~~~~n~~~~~~~~~~~~~ 126 (237)
T PRK07326 107 RLVIDTNLTGAFYTIKAAVP 126 (237)
T ss_pred HHHHhhccHHHHHHHHHHHH
Confidence 89999999999999999887
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0013 Score=58.41 Aligned_cols=86 Identities=14% Similarity=0.149 Sum_probs=67.3
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLA 158 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~ 158 (313)
+++.+++.+++.... ..+ .....+|..+.++++.+++.+.+.+ ++|++++|||.....++ .++|+.+++
T Consensus 25 ~~G~~v~~~~r~~~~--~~~----~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~ 97 (234)
T PRK07577 25 NLGHQVIGIARSAID--DFP----GELFACDLADIEQTAATLAQINEIH-PVDAIVNNVGIALPQPLGKIDLAALQDVYD 97 (234)
T ss_pred HCCCEEEEEeCCccc--ccC----ceEEEeeCCCHHHHHHHHHHHHHhC-CCcEEEECCCCCCCCChHHCCHHHHHHHHH
Confidence 456788877765432 111 1234568889999999999998887 58999999999877765 368889999
Q ss_pred cccccHHHHHHHHhhcc
Q psy2266 159 TNFFALVTVCHILFPLL 175 (313)
Q Consensus 159 ~N~~g~~~~~~~~~p~l 175 (313)
+|+.|++.+++.++|.|
T Consensus 98 ~n~~~~~~l~~~~~~~~ 114 (234)
T PRK07577 98 LNVRAAVQVTQAFLEGM 114 (234)
T ss_pred HHhHHHHHHHHHHHHHH
Confidence 99999999999999966
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0077 Score=55.70 Aligned_cols=77 Identities=17% Similarity=0.118 Sum_probs=58.9
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
++.++.+|++|++++.++++.. ++|++||+||..... ...+.++..+++|+.++..+++++.+.+.+ .++|
T Consensus 51 ~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i 121 (317)
T TIGR01181 51 RYRFVKGDIGDRELVSRLFTEH-----QPDAVVHFAAESHVD---RSISGPAAFIETNVVGTYTLLEAVRKYWHE-FRFH 121 (317)
T ss_pred CcEEEEcCCcCHHHHHHHHhhc-----CCCEEEEcccccCch---hhhhCHHHHHHHHHHHHHHHHHHHHhcCCC-ceEE
Confidence 5677889999999988877642 599999999975421 122456678999999999999988776543 4799
Q ss_pred EEeccc
Q psy2266 90 NVASKL 95 (313)
Q Consensus 90 ~isS~~ 95 (313)
++||..
T Consensus 122 ~~Ss~~ 127 (317)
T TIGR01181 122 HISTDE 127 (317)
T ss_pred Eeeccc
Confidence 999854
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.00073 Score=60.45 Aligned_cols=69 Identities=20% Similarity=0.238 Sum_probs=59.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-CCc----chhhhhhhhcccccHHHHHHHHhhcccCC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-GSF----GQRAETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
..+|..++++++++++.+.+++|++|++++|||.... .++ .++|+.++++|+.|++.+++.++|.|.+.
T Consensus 56 ~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 129 (247)
T PRK09730 56 LQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALK 129 (247)
T ss_pred EEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 4678889999999999999999999999999997532 332 36788999999999999999999988653
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.00074 Score=60.84 Aligned_cols=90 Identities=19% Similarity=0.180 Sum_probs=64.0
Q ss_pred cCCceEEEEecccccccCCCchhhh------hh-hcccC--CCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-CCc---
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QT-LFNES--LTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-GSF--- 149 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~-~~~d~--~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~~~--- 149 (313)
+.+.+++.+++......... .++. .. ..+|. .+.++++++++.+.+.+|++|++++|||.... .++
T Consensus 34 ~~G~~Vi~~~r~~~~~~~~~-~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~ 112 (247)
T PRK08945 34 RHGATVILLGRTEEKLEAVY-DEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQ 112 (247)
T ss_pred HCCCcEEEEeCCHHHHHHHH-HHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccC
Confidence 34668887776543322211 1111 11 23344 37889999999999999999999999998533 232
Q ss_pred -chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 -GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 -~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.+.|+.++++|+.|.+.++++++|
T Consensus 113 ~~~~~~~~~~~n~~g~~~~~~~~~~ 137 (247)
T PRK08945 113 DPEVWQDVMQVNVNATFMLTQALLP 137 (247)
T ss_pred CHHHHHHHHHHccHHHHHHHHHHHH
Confidence 378999999999999999999997
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.00067 Score=62.19 Aligned_cols=91 Identities=15% Similarity=0.095 Sum_probs=66.1
Q ss_pred cCCceEEEEecccccccCCCchh------hh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-CCc----c
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQE------LR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-GSF----G 150 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~------~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~~~----~ 150 (313)
+++.+|+.+++......+..... .+ ....+|..+++++..+++.+.+.+|++|++++|||.... +++ .
T Consensus 29 ~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~ 108 (276)
T PRK05875 29 AAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDS 108 (276)
T ss_pred HCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCH
Confidence 45678887776543322211110 01 123568889999999999999999999999999997533 232 3
Q ss_pred hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++|..++++|+.|++.++++++|
T Consensus 109 ~~~~~~~~~n~~~~~~l~~~~~~ 131 (276)
T PRK05875 109 DAWRRTVDLNVNGTMYVLKHAAR 131 (276)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHH
Confidence 67899999999999999999987
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0039 Score=56.72 Aligned_cols=52 Identities=13% Similarity=-0.022 Sum_probs=36.0
Q ss_pred CCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCcc
Q psy2266 132 GPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLG 189 (313)
Q Consensus 132 G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~ 189 (313)
.++|++++|+|....... ...+++|+.|...+++++.. .+.++||++||...
T Consensus 84 ~~~d~vi~~~g~~~~~~~----~~~~~~n~~~~~~ll~a~~~--~~~~~iV~iSS~~v 135 (251)
T PLN00141 84 DDSDAVICATGFRRSFDP----FAPWKVDNFGTVNLVEACRK--AGVTRFILVSSILV 135 (251)
T ss_pred cCCCEEEECCCCCcCCCC----CCceeeehHHHHHHHHHHHH--cCCCEEEEEccccc
Confidence 379999999886432111 12357888898888888642 22378999999864
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00073 Score=60.57 Aligned_cols=92 Identities=21% Similarity=0.189 Sum_probs=64.3
Q ss_pred cCCceEEEEecccccccCCCchhhh-------hhhcccCC--CHHHHHHHHHHHHHHc-CCccEEEeccCcCC-CCCcc-
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR-------QTLFNESL--TEDQLLDMMTDYVQYN-GPLDKILDTAMDTA-PGSFG- 150 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~-------~~~~~d~~--~~~~~~~~~~~~~~~~-G~lD~Linna~~~~-~~~~~- 150 (313)
+.+.+|+.+++........ .+.+. ....+|.. +.+++..+++.+.+.+ |.+|++++|||... ..++.
T Consensus 28 ~~g~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~ 106 (239)
T PRK08703 28 AAGATVILVARHQKKLEKV-YDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDF 106 (239)
T ss_pred HcCCEEEEEeCChHHHHHH-HHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccc
Confidence 3467877777654332211 11111 11234543 3577899999999999 89999999999753 23442
Q ss_pred ---hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 151 ---QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 151 ---~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
++|+..+++|+.|++.++++++|.|
T Consensus 107 ~~~~~~~~~~~~n~~g~~~l~~~~~~~~ 134 (239)
T PRK08703 107 QTVAEWVNQYRINTVAPMGLTRALFPLL 134 (239)
T ss_pred cCHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 6788999999999999999999965
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0044 Score=57.82 Aligned_cols=152 Identities=13% Similarity=-0.006 Sum_probs=90.5
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
+.+..|+.+++........... .-....+|..+.+++.++++ ++|+++++|+.... ..+.++..+++|+.
T Consensus 22 ~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~D~~~~~~l~~~~~-------~~d~vi~~a~~~~~--~~~~~~~~~~~n~~ 91 (328)
T TIGR03466 22 EQGEEVRVLVRPTSDRRNLEGL-DVEIVEGDLRDPASLRKAVA-------GCRALFHVAADYRL--WAPDPEEMYAANVE 91 (328)
T ss_pred HCCCEEEEEEecCccccccccC-CceEEEeeCCCHHHHHHHHh-------CCCEEEEeceeccc--CCCCHHHHHHHHHH
Confidence 3466777777654332211110 11124557777776665553 57999999986532 23456788999999
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCC-CCCCchhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAG-WPEFSYSV 241 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~ 241 (313)
|+..+++++... .-+++|++||........... ..++ +..... .....|+.
T Consensus 92 ~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~---------~~~e-----------------~~~~~~~~~~~~Y~~ 143 (328)
T TIGR03466 92 GTRNLLRAALEA--GVERVVYTSSVATLGVRGDGT---------PADE-----------------TTPSSLDDMIGHYKR 143 (328)
T ss_pred HHHHHHHHHHHh--CCCeEEEEechhhcCcCCCCC---------CcCc-----------------cCCCCcccccChHHH
Confidence 999998887642 236899999986643110000 0000 000011 11235999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD 279 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~ 279 (313)
+|.+...+++.++.. +|+++..+.|+.+-.+
T Consensus 144 sK~~~e~~~~~~~~~-------~~~~~~ilR~~~~~G~ 174 (328)
T TIGR03466 144 SKFLAEQAALEMAAE-------KGLPVVIVNPSTPIGP 174 (328)
T ss_pred HHHHHHHHHHHHHHh-------cCCCEEEEeCCccCCC
Confidence 999999998554332 2788888888876544
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0012 Score=59.48 Aligned_cols=71 Identities=11% Similarity=0.080 Sum_probs=43.8
Q ss_pred HHHHhcc-cCCceEEEEecccc-cccCCCch-hhh-hhhcccCCCHHHHHHHHHHHHHHcCCcc----EEEeccCcCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLG-MLYNVPSQ-ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLD----KILDTAMDTAP 146 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~-~~~~~~~~-~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD----~Linna~~~~~ 146 (313)
++++..+ +++.+|+.+++... .+.+.... ..+ +...+|..+.++.+.+++.+.+.++..+ ++++|||...+
T Consensus 15 ~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~ 93 (251)
T PRK06924 15 EAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAP 93 (251)
T ss_pred HHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceeccc
Confidence 3444433 45678887776541 11111110 111 2356788899999999999998876432 79999998543
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0048 Score=59.72 Aligned_cols=75 Identities=11% Similarity=0.043 Sum_probs=47.4
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
++.++.+|++|.+++.++++. +|.++|.|+......... .+....++|+.++..+++++...- .-.++|
T Consensus 108 ~~~~v~~Dl~d~~~l~~~i~~-------~d~V~hlA~~~~~~~~~~---~~~~~~~~nv~gt~~llea~~~~~-~v~r~V 176 (367)
T PLN02686 108 GIWTVMANLTEPESLHEAFDG-------CAGVFHTSAFVDPAGLSG---YTKSMAELEAKASENVIEACVRTE-SVRKCV 176 (367)
T ss_pred ceEEEEcCCCCHHHHHHHHHh-------ccEEEecCeeeccccccc---ccchhhhhhHHHHHHHHHHHHhcC-CccEEE
Confidence 477889999999888777652 678888887653221111 112345678888888888755421 123677
Q ss_pred EEeccc
Q psy2266 90 NVASKL 95 (313)
Q Consensus 90 ~isS~~ 95 (313)
++||..
T Consensus 177 ~~SS~~ 182 (367)
T PLN02686 177 FTSSLL 182 (367)
T ss_pred EeccHH
Confidence 777643
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.00095 Score=59.59 Aligned_cols=66 Identities=12% Similarity=0.255 Sum_probs=57.8
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..+++++.++++.+.+.+|++|++++|||....+++ .++|+.++++|+.|.+.+++.+.|.|
T Consensus 60 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 129 (247)
T PRK05565 60 VKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYM 129 (247)
T ss_pred EECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4567789999999999999999999999999998755443 36889999999999999999999966
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.00087 Score=60.69 Aligned_cols=98 Identities=14% Similarity=0.133 Sum_probs=69.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCch--hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc--
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQ--ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF-- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~--~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~-- 149 (313)
++++..+ +++.+++.+++........... +.+ ..+.+|..+.+++...++.+.+++|++|++++|||.....++
T Consensus 16 ~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~ 95 (257)
T PRK07074 16 QALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHD 95 (257)
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhh
Confidence 3344444 3466777776544322111100 011 224678889999999999999999999999999998766554
Q ss_pred --chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 --GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 --~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.++|...+++|+.|.+.+.++++|
T Consensus 96 ~~~~~~~~~~~~n~~~~~~~~~~~~~ 121 (257)
T PRK07074 96 TTPASWRADNALNLEAAYLCVEAVLE 121 (257)
T ss_pred CCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 367888999999999999999887
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0014 Score=58.27 Aligned_cols=64 Identities=11% Similarity=0.222 Sum_probs=56.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..+.++++++++.+.++++++|++++|||.....++ .+.++.++++|+.+.+.+++.+.|
T Consensus 53 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 120 (239)
T TIGR01830 53 VVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLR 120 (239)
T ss_pred EEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4567789999999999999999999999999998765543 368899999999999999999887
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0019 Score=58.06 Aligned_cols=85 Identities=13% Similarity=0.089 Sum_probs=51.8
Q ss_pred HHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHH-HHHHc---CCccEEEeccCcCCC-CCc-
Q psy2266 77 ILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTD-YVQYN---GPLDKILDTAMDTAP-GSF- 149 (313)
Q Consensus 77 a~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~---G~lD~Linna~~~~~-~~~- 149 (313)
+++..+ ++|.+++.+++..................+|..+.++++.+++. ..+++ +++|+++||||.... +++
T Consensus 16 ~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~ 95 (243)
T PRK07023 16 ALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLA 95 (243)
T ss_pred HHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccc
Confidence 344433 45678777765432211000001112356788899999997776 55555 489999999998643 333
Q ss_pred ---chhhhhhhhccc
Q psy2266 150 ---GQRAETTLATNF 161 (313)
Q Consensus 150 ---~~~~~~~~~~N~ 161 (313)
.++|+..+++|+
T Consensus 96 ~~~~~~~~~~~~~n~ 110 (243)
T PRK07023 96 TLDAAAIARAVGLNV 110 (243)
T ss_pred cCCHHHHHHHeeeee
Confidence 367788888884
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0029 Score=60.42 Aligned_cols=79 Identities=19% Similarity=0.126 Sum_probs=59.2
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
++..+.+|++|.+++.++++.. ++|++||+||.... ....+++...+++|+.+++.+++++.+ +...+++|
T Consensus 53 ~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vih~A~~~~~---~~~~~~~~~~~~~N~~g~~~ll~a~~~-~~~~~~iv 123 (349)
T TIGR02622 53 KIEDHFGDIRDAAKLRKAIAEF-----KPEIVFHLAAQPLV---RKSYADPLETFETNVMGTVNLLEAIRA-IGSVKAVV 123 (349)
T ss_pred CceEEEccCCCHHHHHHHHhhc-----CCCEEEECCccccc---ccchhCHHHHHHHhHHHHHHHHHHHHh-cCCCCEEE
Confidence 4667899999999988877753 58999999996432 122256677889999999999998753 32246999
Q ss_pred EEeccccc
Q psy2266 90 NVASKLGM 97 (313)
Q Consensus 90 ~isS~~~~ 97 (313)
++||....
T Consensus 124 ~~SS~~vy 131 (349)
T TIGR02622 124 NVTSDKCY 131 (349)
T ss_pred EEechhhh
Confidence 99996543
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0016 Score=57.76 Aligned_cols=91 Identities=12% Similarity=0.072 Sum_probs=67.0
Q ss_pred cCCceEEEEecccccccCCCch---hhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQ---ELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAET 155 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~ 155 (313)
+++.+++.+++......+.... .......+|..+.++++.+++.+.+++|++|+++++||.....++ .++++.
T Consensus 29 ~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~ 108 (239)
T PRK12828 29 ARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDR 108 (239)
T ss_pred HCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHH
Confidence 4577888887754322111000 001123577889999999999999999999999999998654443 367889
Q ss_pred hhhcccccHHHHHHHHhh
Q psy2266 156 TLATNFFALVTVCHILFP 173 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p 173 (313)
.+++|+.|++.++++++|
T Consensus 109 ~~~~n~~~~~~~~~~~~~ 126 (239)
T PRK12828 109 MYGVNVKTTLNASKAALP 126 (239)
T ss_pred HHHhhchhHHHHHHHHHH
Confidence 999999999999999987
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.00079 Score=66.37 Aligned_cols=167 Identities=16% Similarity=0.139 Sum_probs=105.4
Q ss_pred HHHHHhcc-cCCceEEEEecccccccCC-Cchhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc-c
Q psy2266 75 CHILFPLL-RPHARVVNVASKLGMLYNV-PSQELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF-G 150 (313)
Q Consensus 75 ~ra~~~~m-~~~g~IV~isS~~~~~~~~-~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~-~ 150 (313)
-+++++.+ ++|.+++.+++........ ...... ....+|..+++++.+ .++++|++|||||....+.. .
T Consensus 191 G~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~-------~l~~IDiLInnAGi~~~~~~s~ 263 (406)
T PRK07424 191 GQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAE-------LLEKVDILIINHGINVHGERTP 263 (406)
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHH-------HhCCCCEEEECCCcCCCCCCCH
Confidence 34444444 4567888777654322110 000001 123456667766543 45789999999998654433 4
Q ss_pred hhhhhhhhcccccHHHHHHHHhhcccCC------CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHh
Q psy2266 151 QRAETTLATNFFALVTVCHILFPLLRPH------ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLA 224 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p~l~~~------g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (313)
++++.++++|+.|++.++++++|.|+++ +.++++|+ ++..
T Consensus 264 e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~--------------------------------- 309 (406)
T PRK07424 264 EAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVN--------------------------------- 309 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cccc---------------------------------
Confidence 6889999999999999999999999653 23455544 3221
Q ss_pred hhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhh
Q psy2266 225 KEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKI 298 (313)
Q Consensus 225 ~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~ 298 (313)
......|++||+|+..++. +.++ ..++.|..+.||+++|++... ...+|++.+.....
T Consensus 310 --------~~~~~~Y~ASKaAl~~l~~-l~~~------~~~~~I~~i~~gp~~t~~~~~-~~~spe~vA~~il~ 367 (406)
T PRK07424 310 --------PAFSPLYELSKRALGDLVT-LRRL------DAPCVVRKLILGPFKSNLNPI-GVMSADWVAKQILK 367 (406)
T ss_pred --------CCCchHHHHHHHHHHHHHH-HHHh------CCCCceEEEEeCCCcCCCCcC-CCCCHHHHHHHHHH
Confidence 1122459999999999973 3322 125777888999999998642 23566766655443
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0054 Score=57.34 Aligned_cols=134 Identities=14% Similarity=0.067 Sum_probs=85.8
Q ss_pred hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCC-CceEEecCC
Q psy2266 109 TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPH-ARVVNVASK 187 (313)
Q Consensus 109 ~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~-g~iv~vss~ 187 (313)
...+|..+++++.+.++ +.|+++++|.....+. ....+..+++|+.|+-.++++... .+ .++|++||.
T Consensus 49 ~~~~Di~d~~~l~~a~~-------g~d~V~H~Aa~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~---~~VkrlVytSS~ 117 (280)
T PF01073_consen 49 YIQGDITDPESLEEALE-------GVDVVFHTAAPVPPWG-DYPPEEYYKVNVDGTRNVLEAARK---AGVKRLVYTSSI 117 (280)
T ss_pred EEEeccccHHHHHHHhc-------CCceEEEeCccccccC-cccHHHHHHHHHHHHHHHHHHHHH---cCCCEEEEEcCc
Confidence 35667778887777664 6799999998765544 456788999999999999887763 23 689999999
Q ss_pred ccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhcc-CCC-CCC
Q psy2266 188 LGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSK-DKR-RPD 265 (313)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~-~~~-~~g 265 (313)
..........++ ....|.. .........|+.||+.-+.++ .+... .+. ...
T Consensus 118 ~vv~~~~~~~~~----------------------~~~dE~~-~~~~~~~~~Y~~SK~~AE~~V----~~a~~~~~~~g~~ 170 (280)
T PF01073_consen 118 SVVFDNYKGDPI----------------------INGDEDT-PYPSSPLDPYAESKALAEKAV----LEANGSELKNGGR 170 (280)
T ss_pred ceeEeccCCCCc----------------------ccCCcCC-cccccccCchHHHHHHHHHHH----Hhhcccccccccc
Confidence 886532111110 0000110 001112345999999888887 33222 111 124
Q ss_pred eEEEeeccccccccc
Q psy2266 266 IIVNPVHPGYVNTDL 280 (313)
Q Consensus 266 I~vn~v~PG~v~T~~ 280 (313)
++..+|.|..|--|-
T Consensus 171 l~t~~lRP~~IyGp~ 185 (280)
T PF01073_consen 171 LRTCALRPAGIYGPG 185 (280)
T ss_pred eeEEEEeccEEeCcc
Confidence 888899998875553
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0011 Score=69.51 Aligned_cols=70 Identities=10% Similarity=0.108 Sum_probs=62.4
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
..+|..++++++++++.+.+.+|++|++|+|||....+++ .+.|+.++++|+.|++.+++.++|.|++.+
T Consensus 475 v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~ 548 (681)
T PRK08324 475 VACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG 548 (681)
T ss_pred EEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 4567789999999999999999999999999998877665 368999999999999999999999998754
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0016 Score=58.28 Aligned_cols=92 Identities=15% Similarity=0.075 Sum_probs=69.4
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
+++..|+.+++......... ..+. ....+|..+++++..+++.+.+++|++|++++|||.....++ .++
T Consensus 28 ~~g~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~ 106 (251)
T PRK12826 28 ADGAEVIVVDICGDDAAATA-ELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQ 106 (251)
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHH
Confidence 34677877776533221111 1111 123567789999999999999999999999999998877654 368
Q ss_pred hhhhhhcccccHHHHHHHHhhcc
Q psy2266 153 AETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
++..+++|+.+++.+.+.++|.|
T Consensus 107 ~~~~~~~n~~~~~~l~~~~~~~~ 129 (251)
T PRK12826 107 WERVIDVNLTGTFLLTQAALPAL 129 (251)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHH
Confidence 88999999999999999999965
|
|
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0012 Score=62.42 Aligned_cols=127 Identities=17% Similarity=0.171 Sum_probs=94.4
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhhcccCCCceEEecC
Q psy2266 111 FNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFPLLRPHARVVNVAS 186 (313)
Q Consensus 111 ~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss 186 (313)
.+|..|-++++..++.+.+..|++|.|++|||+.-++-|. +.++..+++|++|+++++++.+|.|++.+..-.+.-
T Consensus 90 S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~ 169 (331)
T KOG1210|consen 90 SVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIIL 169 (331)
T ss_pred ccccccHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEE
Confidence 4666788999999999999999999999999999999884 689999999999999999999999997555443333
Q ss_pred CccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCe
Q psy2266 187 KLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDI 266 (313)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI 266 (313)
..+.. +-.+...|+ +-++...-.|.|+.++..| +
T Consensus 170 vsS~~----------------------------------------a~~~i~Gys-aYs~sK~alrgLa~~l~qE-----~ 203 (331)
T KOG1210|consen 170 VSSQL----------------------------------------AMLGIYGYS-AYSPSKFALRGLAEALRQE-----L 203 (331)
T ss_pred ehhhh----------------------------------------hhcCccccc-ccccHHHHHHHHHHHHHHH-----H
Confidence 33221 444444454 4455777789999999987 3
Q ss_pred EEEeecccccccccccc
Q psy2266 267 IVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 267 ~vn~v~PG~v~T~~~~~ 283 (313)
+-..|+=-...++-+..
T Consensus 204 i~~~v~Vt~~~P~~~~t 220 (331)
T KOG1210|consen 204 IKYGVHVTLYYPPDTLT 220 (331)
T ss_pred hhcceEEEEEcCCCCCC
Confidence 43355544444443333
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0018 Score=57.94 Aligned_cols=68 Identities=15% Similarity=0.116 Sum_probs=59.0
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
..+|..+.++++.+++.+.+.++++|++|+|||.....++ .++|+.++++|+.|++.+++.+.|.+.+
T Consensus 64 ~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 135 (249)
T PRK12827 64 LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIR 135 (249)
T ss_pred EEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 4567789999999999999999999999999998776554 3678999999999999999999965554
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0025 Score=56.68 Aligned_cols=66 Identities=9% Similarity=0.098 Sum_probs=57.5
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..+.+++.++.+.+.+.++++|++++|||.....++ .+.++.++++|+.+.+.+.++++|.+
T Consensus 60 ~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 129 (248)
T PRK05557 60 VQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPM 129 (248)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3458889999999999999999999999999998765543 36788999999999999999999955
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.00074 Score=64.23 Aligned_cols=88 Identities=14% Similarity=0.147 Sum_probs=56.5
Q ss_pred cCCceEEEEecccccccCCCchhhhh--------hhcccCCCHHHHHHHHHHHHHHcCC--ccEEEeccCcCCC--CCc-
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQ--------TLFNESLTEDQLLDMMTDYVQYNGP--LDKILDTAMDTAP--GSF- 149 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~--------~~~~d~~~~~~~~~~~~~~~~~~G~--lD~Linna~~~~~--~~~- 149 (313)
++|.+|+.+++....+.+.. .++.. ...+|..+ +..+.++.+.+.+++ +|+|+||||.... +++
T Consensus 75 ~~G~~Vil~~R~~~~l~~~~-~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~ 151 (320)
T PLN02780 75 RKGLNLVLVARNPDKLKDVS-DSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFH 151 (320)
T ss_pred HCCCCEEEEECCHHHHHHHH-HHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccc
Confidence 45678888877655443322 11111 12334432 234455555566664 5599999998643 233
Q ss_pred ---chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 ---GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 ---~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.++++.++++|+.|++.+++.++|
T Consensus 152 ~~~~~~~~~~~~vN~~g~~~l~~~~lp 178 (320)
T PLN02780 152 EVDEELLKNLIKVNVEGTTKVTQAVLP 178 (320)
T ss_pred cCCHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 367899999999999999999998
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.014 Score=54.42 Aligned_cols=126 Identities=10% Similarity=0.028 Sum_probs=75.1
Q ss_pred cCCCHHHHHHHHHHHHH--HcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccc
Q psy2266 113 ESLTEDQLLDMMTDYVQ--YNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM 190 (313)
Q Consensus 113 d~~~~~~~~~~~~~~~~--~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~ 190 (313)
+..|....+++++.+.+ .++++|+++|+|+....... +-+..+++|+.++..+.+++.. .+.++|++||...+
T Consensus 46 ~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~--~~~~~~~~n~~~t~~ll~~~~~---~~~~~i~~SS~~vy 120 (308)
T PRK11150 46 DIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSSTTEW--DGKYMMDNNYQYSKELLHYCLE---REIPFLYASSAATY 120 (308)
T ss_pred hhhhhhhHHHHHHHHhcccccCCccEEEECceecCCcCC--ChHHHHHHHHHHHHHHHHHHHH---cCCcEEEEcchHHh
Confidence 33344445555555543 45789999999986443221 1234789999999988888754 23579998887643
Q ss_pred cccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEe
Q psy2266 191 LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNP 270 (313)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~ 270 (313)
-.. ... ..++ .....+...|+.||.+...+++.++.. +++.+..
T Consensus 121 g~~-~~~---------~~~E-------------------~~~~~p~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~~ 164 (308)
T PRK11150 121 GGR-TDD---------FIEE-------------------REYEKPLNVYGYSKFLFDEYVRQILPE-------ANSQICG 164 (308)
T ss_pred CcC-CCC---------CCcc-------------------CCCCCCCCHHHHHHHHHHHHHHHHHHH-------cCCCEEE
Confidence 210 000 0000 011223346999999988888544322 2677777
Q ss_pred ecccccccc
Q psy2266 271 VHPGYVNTD 279 (313)
Q Consensus 271 v~PG~v~T~ 279 (313)
+-|+.|--|
T Consensus 165 lR~~~vyG~ 173 (308)
T PRK11150 165 FRYFNVYGP 173 (308)
T ss_pred EeeeeecCC
Confidence 777766544
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.012 Score=54.68 Aligned_cols=55 Identities=9% Similarity=0.034 Sum_probs=42.0
Q ss_pred HcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCcc
Q psy2266 130 YNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLG 189 (313)
Q Consensus 130 ~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~ 189 (313)
.++++|+++|+|+.... ..++.+..+++|+.|+..+.+++.. .+.++|++||...
T Consensus 63 ~~~~~D~vvh~A~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~---~~~~~v~~SS~~v 117 (314)
T TIGR02197 63 AFGKIEAIFHQGACSDT--TETDGEYMMENNYQYSKRLLDWCAE---KGIPFIYASSAAT 117 (314)
T ss_pred ccCCCCEEEECccccCc--cccchHHHHHHHHHHHHHHHHHHHH---hCCcEEEEccHHh
Confidence 46789999999986432 2345677899999999999888764 2358999999654
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0021 Score=58.63 Aligned_cols=35 Identities=11% Similarity=0.058 Sum_probs=29.9
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA 145 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~ 145 (313)
..+|..++++++++++++.+ +|++|++++|+|...
T Consensus 65 ~~~D~~~~~~~~~~~~~~~~-~g~id~li~~ag~~~ 99 (253)
T PRK07904 65 IDFDALDTDSHPKVIDAAFA-GGDVDVAIVAFGLLG 99 (253)
T ss_pred EEecCCChHHHHHHHHHHHh-cCCCCEEEEeeecCC
Confidence 45677899999999999886 599999999999864
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0029 Score=56.82 Aligned_cols=93 Identities=15% Similarity=0.076 Sum_probs=69.1
Q ss_pred cCCceEEEEecccccccCCCch----hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQ----ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRA 153 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~----~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~ 153 (313)
+++.+|+.+++........... ..+ ....+|..+.++++++++.+.+.++++|++++|||.....+. .+++
T Consensus 23 ~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~ 102 (255)
T TIGR01963 23 AAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDW 102 (255)
T ss_pred HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHH
Confidence 4577888887754332221110 001 124568889999999999999999999999999998655432 3678
Q ss_pred hhhhhcccccHHHHHHHHhhcc
Q psy2266 154 ETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+.++++|+.|++.+++.++|.|
T Consensus 103 ~~~~~~n~~g~~~~~~~~~~~~ 124 (255)
T TIGR01963 103 DRIIAIMLTSAFHTIRAALPHM 124 (255)
T ss_pred HHHHHHHhHHHHHHHHHHHHHH
Confidence 8999999999999999999966
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0017 Score=58.00 Aligned_cols=92 Identities=16% Similarity=0.109 Sum_probs=62.8
Q ss_pred cCCceEEEEecccccccCCCchhhhh-hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQ-TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTL 157 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~ 157 (313)
+++..|+.+++......+.. ...+. ...+|..+.+++.++++ .++++|++|+|||....+++ .++|+.++
T Consensus 31 ~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~ 105 (245)
T PRK07060 31 QRGARVVAAARNAAALDRLA-GETGCEPLRLDVGDDAAIRAALA----AAGAFDGLVNCAGIASLESALDMTAEGFDRVM 105 (245)
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHhCCeEEEecCCCHHHHHHHHH----HhCCCCEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 34667777776433221111 11111 23456667776666554 37899999999998766554 36789999
Q ss_pred hcccccHHHHHHHHhhcccCCC
Q psy2266 158 ATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 158 ~~N~~g~~~~~~~~~p~l~~~g 179 (313)
++|+.|++.++++++|.+++.+
T Consensus 106 ~~n~~~~~~l~~~~~~~~~~~~ 127 (245)
T PRK07060 106 AVNARGAALVARHVARAMIAAG 127 (245)
T ss_pred HHHhHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999887644
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.019 Score=52.78 Aligned_cols=120 Identities=18% Similarity=0.098 Sum_probs=73.9
Q ss_pred ccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCcccc
Q psy2266 112 NESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGML 191 (313)
Q Consensus 112 ~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~ 191 (313)
.|..+.+++.+.++. ..+|+++++|+...........+..+++|+.|+..+.+++.. .+.++|++||.....
T Consensus 34 ~d~~~~~~~~~~~~~-----~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~v~~Ss~~vy~ 105 (287)
T TIGR01214 34 LDLTDPEALERLLRA-----IRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAAR---HGARLVHISTDYVFD 105 (287)
T ss_pred cCCCCHHHHHHHHHh-----CCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHH---cCCeEEEEeeeeeec
Confidence 455677766666543 257999999997654333345567889999999999888643 235899999965321
Q ss_pred ccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEee
Q psy2266 192 YNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPV 271 (313)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v 271 (313)
.. .. ...++ . . ...+...|+.+|.+.+.+++. + +..+..+
T Consensus 106 ~~-~~---------~~~~E----------------~-~--~~~~~~~Y~~~K~~~E~~~~~----~-------~~~~~il 145 (287)
T TIGR01214 106 GE-GK---------RPYRE----------------D-D--ATNPLNVYGQSKLAGEQAIRA----A-------GPNALIV 145 (287)
T ss_pred CC-CC---------CCCCC----------------C-C--CCCCcchhhHHHHHHHHHHHH----h-------CCCeEEE
Confidence 10 00 00000 0 0 112334699999988888743 2 2356677
Q ss_pred cccccccc
Q psy2266 272 HPGYVNTD 279 (313)
Q Consensus 272 ~PG~v~T~ 279 (313)
.|+.|-.+
T Consensus 146 R~~~v~G~ 153 (287)
T TIGR01214 146 RTSWLYGG 153 (287)
T ss_pred EeeecccC
Confidence 77776544
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.032 Score=49.31 Aligned_cols=74 Identities=18% Similarity=0.196 Sum_probs=51.8
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
++.++.+|+.|.++++++++.. .+|.++|.||..... .........++.|+.+...+++++...=. .++|
T Consensus 43 ~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~~i 112 (236)
T PF01370_consen 43 NVEFVIGDLTDKEQLEKLLEKA-----NIDVVIHLAAFSSNP---ESFEDPEEIIEANVQGTRNLLEAAREAGV--KRFI 112 (236)
T ss_dssp TEEEEESETTSHHHHHHHHHHH-----TESEEEEEBSSSSHH---HHHHSHHHHHHHHHHHHHHHHHHHHHHTT--SEEE
T ss_pred eEEEEEeecccccccccccccc-----CceEEEEeecccccc---ccccccccccccccccccccccccccccc--cccc
Confidence 5788999999999998888875 799999999885410 11145567777888887777776553211 3555
Q ss_pred EEec
Q psy2266 90 NVAS 93 (313)
Q Consensus 90 ~isS 93 (313)
++||
T Consensus 113 ~~sS 116 (236)
T PF01370_consen 113 FLSS 116 (236)
T ss_dssp EEEE
T ss_pred cccc
Confidence 5555
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0033 Score=55.99 Aligned_cols=50 Identities=12% Similarity=0.137 Sum_probs=41.9
Q ss_pred HHHHHHHcCCccEEEeccCcCCC-CCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 124 MTDYVQYNGPLDKILDTAMDTAP-GSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 124 ~~~~~~~~G~lD~Linna~~~~~-~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++.+.+.+|++|+++||||.... .++ .++|+.++++|+.|++.+++.++|
T Consensus 58 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 112 (235)
T PRK06550 58 LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLP 112 (235)
T ss_pred HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 66677788999999999997532 333 368999999999999999999998
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0033 Score=55.84 Aligned_cols=155 Identities=25% Similarity=0.321 Sum_probs=119.1
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
+++..|+.+++........ ...+. ....+|..+++++..+++.+.+.++++|++++|||.....++ .+.
T Consensus 27 ~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~ 105 (246)
T PRK05653 27 ADGAKVVIYDSNEEAAEAL-AAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEED 105 (246)
T ss_pred HCCCEEEEEeCChhHHHHH-HHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHH
Confidence 3466777777654332211 11111 123467889999999999999999999999999998766553 367
Q ss_pred hhhhhhcccccHHHHHHHHhhcccCC--CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccc
Q psy2266 153 AETTLATNFFALVTVCHILFPLLRPH--ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDK 230 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l~~~--g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (313)
|+..+++|+.+.+.+++.+.|.|++. ++||++||..+..
T Consensus 106 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~--------------------------------------- 146 (246)
T PRK05653 106 WDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT--------------------------------------- 146 (246)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc---------------------------------------
Confidence 88999999999999999999999653 6999999987654
Q ss_pred cCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 231 EAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 231 ~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+..+...|+.+|+++..+++.+++++... ||++++|+||.+.|++..
T Consensus 147 -~~~~~~~y~~sk~~~~~~~~~l~~~~~~~----~i~~~~i~pg~~~~~~~~ 193 (246)
T PRK05653 147 -GNPGQTNYSAAKAGVIGFTKALALELASR----GITVNAVAPGFIDTDMTE 193 (246)
T ss_pred -CCCCCcHhHhHHHHHHHHHHHHHHHHhhc----CeEEEEEEeCCcCCcchh
Confidence 12233469999999999998888776654 999999999999998765
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.03 Score=51.91 Aligned_cols=77 Identities=14% Similarity=0.155 Sum_probs=56.4
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
++..+.+|+++.++++++++. +++|++|||||...... ......+.++.|+.++..+++++... ...++|
T Consensus 48 ~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv~~ag~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v 117 (328)
T TIGR01179 48 RVTFVEGDLRDRELLDRLFEE-----HKIDAVIHFAGLIAVGE---SVQDPLKYYRNNVVNTLNLLEAMQQT--GVKKFI 117 (328)
T ss_pred ceEEEECCCCCHHHHHHHHHh-----CCCcEEEECccccCcch---hhcCchhhhhhhHHHHHHHHHHHHhc--CCCEEE
Confidence 456788999999998887763 57999999999864321 11344567889999999999876532 235899
Q ss_pred EEecccc
Q psy2266 90 NVASKLG 96 (313)
Q Consensus 90 ~isS~~~ 96 (313)
++||...
T Consensus 118 ~~ss~~~ 124 (328)
T TIGR01179 118 FSSSAAV 124 (328)
T ss_pred Eecchhh
Confidence 9888643
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0042 Score=55.16 Aligned_cols=66 Identities=11% Similarity=0.154 Sum_probs=58.3
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..+.+++..+++.+.+.++++|++++|||....+++ .++|+.++++|+.+.+.+++.++|.+
T Consensus 61 ~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 130 (249)
T PRK12825 61 VQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPM 130 (249)
T ss_pred EECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4567789999999999999999999999999998776663 46789999999999999999999955
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0041 Score=56.02 Aligned_cols=98 Identities=17% Similarity=0.176 Sum_probs=68.7
Q ss_pred HHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHc-CCccEEEeccCcCCCCCc----c
Q psy2266 77 ILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYN-GPLDKILDTAMDTAPGSF----G 150 (313)
Q Consensus 77 a~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-G~lD~Linna~~~~~~~~----~ 150 (313)
+++..+ +++.+++.+++.....+.....+ -+...+|..+.+++.++++.+.+.. +++|++++|||.....++ .
T Consensus 17 ~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~ 95 (256)
T PRK08017 17 EAALELKRRGYRVLAACRKPDDVARMNSLG-FTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISR 95 (256)
T ss_pred HHHHHHHHCCCEEEEEeCCHHHhHHHHhCC-CeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCH
Confidence 333333 34667777766543332221111 1234567779999999888887764 799999999998665554 3
Q ss_pred hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 151 QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
++++.++++|+.|++.+++.++|.|
T Consensus 96 ~~~~~~~~~n~~g~~~~~~~~~~~~ 120 (256)
T PRK08017 96 QQMEQQFSTNFFGTHQLTMLLLPAM 120 (256)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 6788999999999999999999865
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0069 Score=50.37 Aligned_cols=118 Identities=15% Similarity=0.110 Sum_probs=94.7
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhhcccCCCceEEec
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 185 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vs 185 (313)
..+|..++++.+++++.+.+.++++|++++|||.....++. ++++.++++|+.|++.+++.+.+ .+.++++++|
T Consensus 58 ~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~ii~~s 135 (180)
T smart00822 58 VACDVADRAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD--LPLDFFVLFS 135 (180)
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc--CCcceEEEEc
Confidence 35677789999999999999999999999999976544442 77899999999999999998854 2348899999
Q ss_pred CCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCC
Q psy2266 186 SKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPD 265 (313)
Q Consensus 186 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~g 265 (313)
|..+... ......|+++|.++..++ +.+... |
T Consensus 136 s~~~~~~----------------------------------------~~~~~~y~~sk~~~~~~~----~~~~~~----~ 167 (180)
T smart00822 136 SVAGVLG----------------------------------------NPGQANYAAANAFLDALA----AHRRAR----G 167 (180)
T ss_pred cHHHhcC----------------------------------------CCCchhhHHHHHHHHHHH----HHHHhc----C
Confidence 9877541 223346999999999999 444444 8
Q ss_pred eEEEeecccccc
Q psy2266 266 IIVNPVHPGYVN 277 (313)
Q Consensus 266 I~vn~v~PG~v~ 277 (313)
+++.++.||++.
T Consensus 168 ~~~~~~~~g~~~ 179 (180)
T smart00822 168 LPATSINWGAWA 179 (180)
T ss_pred CceEEEeecccc
Confidence 999999999874
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.027 Score=55.14 Aligned_cols=74 Identities=11% Similarity=0.010 Sum_probs=46.7
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
..+.++++|++|.+++.++++.. .+++|+||||+|...... . ..+++|+.+...+++++... .-+++
T Consensus 111 ~~v~~v~~Dl~d~~~l~~~~~~~---~~~~D~Vi~~aa~~~~~~----~----~~~~vn~~~~~~ll~aa~~~--gv~r~ 177 (390)
T PLN02657 111 PGAEVVFGDVTDADSLRKVLFSE---GDPVDVVVSCLASRTGGV----K----DSWKIDYQATKNSLDAGREV--GAKHF 177 (390)
T ss_pred CCceEEEeeCCCHHHHHHHHHHh---CCCCcEEEECCccCCCCC----c----cchhhHHHHHHHHHHHHHHc--CCCEE
Confidence 35788999999999988877643 127999999998533211 1 12345666666666654321 12456
Q ss_pred EEEeccc
Q psy2266 89 VNVASKL 95 (313)
Q Consensus 89 V~isS~~ 95 (313)
|++||..
T Consensus 178 V~iSS~~ 184 (390)
T PLN02657 178 VLLSAIC 184 (390)
T ss_pred EEEeecc
Confidence 6666643
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.046 Score=57.07 Aligned_cols=76 Identities=14% Similarity=0.093 Sum_probs=47.6
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.++.++.+|++|.+.+..++.. .++|++||+|+...... ........+++|+.++..+.+++... ..-.++
T Consensus 57 ~~v~~~~~Dl~d~~~~~~~~~~-----~~~D~ViHlAa~~~~~~---~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~vkr~ 127 (668)
T PLN02260 57 PNFKFVKGDIASADLVNYLLIT-----EGIDTIMHFAAQTHVDN---SFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRF 127 (668)
T ss_pred CCeEEEECCCCChHHHHHHHhh-----cCCCEEEECCCccCchh---hhhCHHHHHHHHHHHHHHHHHHHHhc-CCCcEE
Confidence 3577889999998776554321 46999999999864321 11122345678888888877765431 112355
Q ss_pred EEEec
Q psy2266 89 VNVAS 93 (313)
Q Consensus 89 V~isS 93 (313)
|++||
T Consensus 128 I~~SS 132 (668)
T PLN02260 128 IHVST 132 (668)
T ss_pred EEEcc
Confidence 55555
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.01 Score=54.77 Aligned_cols=27 Identities=4% Similarity=-0.096 Sum_probs=20.4
Q ss_pred CCHHHHHHHHHHHHHHcCCccEEEecc
Q psy2266 115 LTEDQLLDMMTDYVQYNGPLDKILDTA 141 (313)
Q Consensus 115 ~~~~~~~~~~~~~~~~~G~lD~Linna 141 (313)
.++.++..+++.+...+++-++.+|+.
T Consensus 171 asKaa~~~~~~~la~e~~~~gIrvn~i 197 (275)
T PRK06940 171 IAKRANALRVMAEAVKWGERGARINSI 197 (275)
T ss_pred HHHHHHHHHHHHHHHHHccCCeEEEEe
Confidence 466667788888888888777877774
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0092 Score=53.19 Aligned_cols=91 Identities=12% Similarity=0.122 Sum_probs=61.8
Q ss_pred HHHHhcc-cCCc-eEEEEecccccccCCCchhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCc-CCCCCc--
Q psy2266 76 HILFPLL-RPHA-RVVNVASKLGMLYNVPSQELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMD-TAPGSF-- 149 (313)
Q Consensus 76 ra~~~~m-~~~g-~IV~isS~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~-~~~~~~-- 149 (313)
++++..+ +++. +|+.+++......+ .+.+ ....+|..+.++++++++ .++++|++|+|||. ...+++
T Consensus 20 ~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~----~~~~id~vi~~ag~~~~~~~~~~ 92 (238)
T PRK08264 20 RAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAE----AASDVTILVNNAGIFRTGSLLLE 92 (238)
T ss_pred HHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHH----hcCCCCEEEECCCcCCCCCcccc
Confidence 3344433 3455 77777665444332 1112 224567778888766554 46889999999998 444444
Q ss_pred --chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 --GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 --~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.+.|+.++++|+.+++.+++++.|
T Consensus 93 ~~~~~~~~~~~~n~~~~~~l~~~~~~ 118 (238)
T PRK08264 93 GDEDALRAEMETNYFGPLAMARAFAP 118 (238)
T ss_pred CCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 378899999999999999999988
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0076 Score=54.84 Aligned_cols=80 Identities=10% Similarity=0.091 Sum_probs=61.9
Q ss_pred CChhHHHHHHHhHHHHHHHHHHHHHHhcccC-CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcC
Q psy2266 54 GSFGQRAETTLATNFFALVTVCHILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNG 132 (313)
Q Consensus 54 ~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~-~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G 132 (313)
+...++|++++++|+.+++.+++++.|.|++ +|+||+++|..+...... .......+.++..+++.+...++
T Consensus 102 ~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------~~~Y~~sKaa~~~l~~~la~e~~ 174 (262)
T TIGR03325 102 DRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGG-------GPLYTAAKHAVVGLVKELAFELA 174 (262)
T ss_pred hhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCC-------CchhHHHHHHHHHHHHHHHHhhc
Confidence 3445889999999999999999999999954 689999999876543221 12344578889999999999998
Q ss_pred CccEEEecc
Q psy2266 133 PLDKILDTA 141 (313)
Q Consensus 133 ~lD~Linna 141 (313)
+- +.+|+.
T Consensus 175 ~~-irvn~i 182 (262)
T TIGR03325 175 PY-VRVNGV 182 (262)
T ss_pred cC-eEEEEE
Confidence 74 777763
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0062 Score=54.64 Aligned_cols=88 Identities=15% Similarity=0.052 Sum_probs=61.7
Q ss_pred cCCceEEEEecccccccCCCchh-----hh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQE-----LR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~-----~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
++|..|+.+++..........+. .+ ....+|..+.++++++++.+.+ .+|++++|||.....++ .++
T Consensus 23 ~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d~vv~~ag~~~~~~~~~~~~~~ 99 (243)
T PRK07102 23 AAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPDIVLIAVGTLGDQAACEADPAL 99 (243)
T ss_pred hcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCCEEEECCcCCCCcccccCCHHH
Confidence 45677777776554332211110 01 2245677899999998888765 35999999998765543 356
Q ss_pred hhhhhhcccccHHHHHHHHhh
Q psy2266 153 AETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p 173 (313)
+..++++|+.|++.+++++.|
T Consensus 100 ~~~~~~~n~~~~~~l~~~~~~ 120 (243)
T PRK07102 100 ALREFRTNFEGPIALLTLLAN 120 (243)
T ss_pred HHHHHHhhhHHHHHHHHHHHH
Confidence 778999999999999999988
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.043 Score=51.39 Aligned_cols=70 Identities=14% Similarity=0.066 Sum_probs=49.6
Q ss_pred ccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCcc
Q psy2266 112 NESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLG 189 (313)
Q Consensus 112 ~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~ 189 (313)
.|..|.++++++++. -+.|+++|+|+........++-+..+.+|+.|+..+.+++.- .+.++|++||...
T Consensus 38 ~Dl~d~~~~~~~~~~-----~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~---~g~~~v~~Ss~~V 107 (299)
T PRK09987 38 GDFSNPEGVAETVRK-----IRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANE---VGAWVVHYSTDYV 107 (299)
T ss_pred CCCCCHHHHHHHHHh-----cCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHH---cCCeEEEEccceE
Confidence 466777777665553 257999999997765444344466778999999988887654 2357888888654
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.02 Score=54.82 Aligned_cols=125 Identities=11% Similarity=-0.035 Sum_probs=77.3
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLG 189 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~ 189 (313)
+.+|..+.+...++++ .+|+++|.|+........++-...+++|+.|+..+.+++... .-.++|++||...
T Consensus 74 ~~~Di~d~~~l~~~~~-------~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~--~~~~~v~~SS~~v 144 (348)
T PRK15181 74 IQGDIRKFTDCQKACK-------NVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA--HVSSFTYAASSST 144 (348)
T ss_pred EEccCCCHHHHHHHhh-------CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeechHh
Confidence 3456667665554443 489999999875443332334457999999999998876431 1258999998754
Q ss_pred ccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEE
Q psy2266 190 MLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVN 269 (313)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn 269 (313)
.... +.. ... + +....+...|+.||.+...+++.++.. +|+++.
T Consensus 145 yg~~-~~~---------~~~------------------e-~~~~~p~~~Y~~sK~~~e~~~~~~~~~-------~~~~~~ 188 (348)
T PRK15181 145 YGDH-PDL---------PKI------------------E-ERIGRPLSPYAVTKYVNELYADVFARS-------YEFNAI 188 (348)
T ss_pred hCCC-CCC---------CCC------------------C-CCCCCCCChhhHHHHHHHHHHHHHHHH-------hCCCEE
Confidence 3211 000 000 0 001233446999999999888554332 268888
Q ss_pred eecccccccc
Q psy2266 270 PVHPGYVNTD 279 (313)
Q Consensus 270 ~v~PG~v~T~ 279 (313)
.+-|+.|--|
T Consensus 189 ~lR~~~vyGp 198 (348)
T PRK15181 189 GLRYFNVFGR 198 (348)
T ss_pred EEEecceeCc
Confidence 8888877554
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.0069 Score=55.11 Aligned_cols=82 Identities=6% Similarity=0.041 Sum_probs=63.0
Q ss_pred CCCChhHHHHHHHhHHHHHHHHHHHHHHhcccC-CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHH
Q psy2266 52 APGSFGQRAETTLATNFFALVTVCHILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQY 130 (313)
Q Consensus 52 ~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~-~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 130 (313)
+.+++.+.|++++++|+.+++.+++++.|.|++ +|+||+++|..+...... ...+...+.++..+++.+...
T Consensus 101 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------~~~Y~~sK~a~~~~~~~la~e 173 (263)
T PRK06200 101 PAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGG-------GPLYTASKHAVVGLVRQLAYE 173 (263)
T ss_pred ChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC-------CchhHHHHHHHHHHHHHHHHH
Confidence 445566889999999999999999999999964 689999999887653321 122445777888899998888
Q ss_pred cCCccEEEecc
Q psy2266 131 NGPLDKILDTA 141 (313)
Q Consensus 131 ~G~lD~Linna 141 (313)
+++ ++.+|+.
T Consensus 174 l~~-~Irvn~i 183 (263)
T PRK06200 174 LAP-KIRVNGV 183 (263)
T ss_pred Hhc-CcEEEEE
Confidence 876 4666653
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.053 Score=50.07 Aligned_cols=159 Identities=15% Similarity=0.045 Sum_probs=88.5
Q ss_pred HHHHhcccC-CceEEEEecccccccCCCchhhhhhh-cccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcch-h
Q psy2266 76 HILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTL-FNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQ-R 152 (313)
Q Consensus 76 ra~~~~m~~-~g~IV~isS~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~-~ 152 (313)
+.+.+.+.+ +..|+.+.+......... ..... ..|..+. +.+....+... |+++++|+......... .
T Consensus 14 ~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~d~~~~----~~~~~~~~~~~--d~vih~aa~~~~~~~~~~~ 84 (314)
T COG0451 14 SHLVERLLAAGHDVRGLDRLRDGLDPLL---SGVEFVVLDLTDR----DLVDELAKGVP--DAVIHLAAQSSVPDSNASD 84 (314)
T ss_pred HHHHHHHHhCCCeEEEEeCCCccccccc---cccceeeecccch----HHHHHHHhcCC--CEEEEccccCchhhhhhhC
Confidence 344444444 677777776444333221 11112 2233333 22222222222 99999999876555433 3
Q ss_pred hhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccC
Q psy2266 153 AETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEA 232 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (313)
....+.+|+.|+..+.+++.. ..-.++|+.||........... ..++ .. ..
T Consensus 85 ~~~~~~~nv~gt~~ll~aa~~--~~~~~~v~~ss~~~~~~~~~~~---------~~~E----------------~~--~~ 135 (314)
T COG0451 85 PAEFLDVNVDGTLNLLEAARA--AGVKRFVFASSVSVVYGDPPPL---------PIDE----------------DL--GP 135 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCCCceECCCCCCC---------Cccc----------------cc--CC
Confidence 456899999999999888876 3346788855544333110000 0000 00 01
Q ss_pred CCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccc
Q psy2266 233 GWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD 279 (313)
Q Consensus 233 ~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~ 279 (313)
..+...|+.||.+.+.++...+. .+|+.+..+-|+.|--|
T Consensus 136 ~~p~~~Yg~sK~~~E~~~~~~~~-------~~~~~~~ilR~~~vyGp 175 (314)
T COG0451 136 PRPLNPYGVSKLAAEQLLRAYAR-------LYGLPVVILRPFNVYGP 175 (314)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH-------HhCCCeEEEeeeeeeCC
Confidence 12222599999999999955444 23788888888765443
|
|
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.009 Score=56.99 Aligned_cols=36 Identities=44% Similarity=0.731 Sum_probs=32.9
Q ss_pred HHHHhHHHHHHHHHHHHHHhcccCC--ceEEEEecccc
Q psy2266 61 ETTLATNFFALVTVCHILFPLLRPH--ARVVNVASKLG 96 (313)
Q Consensus 61 ~~~~~vNl~~~i~l~ra~~~~m~~~--g~IV~isS~~~ 96 (313)
+.+|.+|+.|++.|++.+.|.|+.. +|||++||...
T Consensus 137 E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~ 174 (314)
T KOG1208|consen 137 ELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG 174 (314)
T ss_pred hheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence 5678999999999999999999874 89999999887
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.035 Score=53.78 Aligned_cols=142 Identities=15% Similarity=0.155 Sum_probs=75.9
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccc
Q psy2266 111 FNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM 190 (313)
Q Consensus 111 ~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~ 190 (313)
.+|..+.+++.+.++ ..|++||+|+......+...-...+.+|+.|+..+.+++.. .+.++|++||...+
T Consensus 71 ~~Dl~d~~~l~~~~~-------~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~---~~~r~v~~SS~~vY 140 (386)
T PLN02427 71 RINIKHDSRLEGLIK-------MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE---NNKRLIHFSTCEVY 140 (386)
T ss_pred EcCCCChHHHHHHhh-------cCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHh---cCCEEEEEeeeeee
Confidence 456667666554442 37999999997654333333234567899999888877643 23689999997543
Q ss_pred cccccChhhhhhhhccccchHHHHHHHHHHHHHhhhccccc----CCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCe
Q psy2266 191 LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKE----AGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDI 266 (313)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI 266 (313)
- ...+..+.+ ..-++.++..-. ..+..... ...+...|+.||.+...+++.+ .+ .+|+
T Consensus 141 g-~~~~~~~~e---~~p~~~~~~~~~-------~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~----~~---~~g~ 202 (386)
T PLN02427 141 G-KTIGSFLPK---DHPLRQDPAFYV-------LKEDESPCIFGSIEKQRWSYACAKQLIERLIYAE----GA---ENGL 202 (386)
T ss_pred C-CCcCCCCCc---cccccccccccc-------ccccccccccCCCCccccchHHHHHHHHHHHHHH----Hh---hcCC
Confidence 2 100000000 000000000000 00000000 0012235999999988888433 22 2378
Q ss_pred EEEeeccccccccc
Q psy2266 267 IVNPVHPGYVNTDL 280 (313)
Q Consensus 267 ~vn~v~PG~v~T~~ 280 (313)
.+..+.|+.|--|-
T Consensus 203 ~~~ilR~~~vyGp~ 216 (386)
T PLN02427 203 EFTIVRPFNWIGPR 216 (386)
T ss_pred ceEEecccceeCCC
Confidence 99999998887653
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.039 Score=57.68 Aligned_cols=115 Identities=11% Similarity=0.043 Sum_probs=70.1
Q ss_pred CccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHH
Q psy2266 133 PLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQ 212 (313)
Q Consensus 133 ~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (313)
++|+++|+|+...+......-+..+++|+.|+..+.+++.-. +.++|++||....-.. ... .++++.
T Consensus 382 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~---~~~~V~~SS~~vyg~~-~~~---------~~~E~~ 448 (660)
T PRK08125 382 KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY---NKRIIFPSTSEVYGMC-TDK---------YFDEDT 448 (660)
T ss_pred CCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc---CCeEEEEcchhhcCCC-CCC---------CcCccc
Confidence 689999999977654444444567899999999998887642 3589999997543210 000 011100
Q ss_pred HHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccc
Q psy2266 213 LLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD 279 (313)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~ 279 (313)
... .......+...|+.||.+...+++.+++. +|+++..+-|+.|--|
T Consensus 449 ~~~------------~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~-------~g~~~~ilR~~~vyGp 496 (660)
T PRK08125 449 SNL------------IVGPINKQRWIYSVSKQLLDRVIWAYGEK-------EGLRFTLFRPFNWMGP 496 (660)
T ss_pred ccc------------ccCCCCCCccchHHHHHHHHHHHHHHHHh-------cCCceEEEEEceeeCC
Confidence 000 00000112235999999999988554433 2677777888776544
|
|
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.025 Score=53.51 Aligned_cols=59 Identities=24% Similarity=0.242 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHhcccC-CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcC
Q psy2266 67 NFFALVTVCHILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNG 132 (313)
Q Consensus 67 Nl~~~i~l~ra~~~~m~~-~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G 132 (313)
|++|++++++++.|++|+ .||||+++|..+++.-+.. -..-.++-+++++.+.+-...-
T Consensus 138 NllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~~-------g~Y~~SK~aVeaf~D~lR~EL~ 197 (322)
T KOG1610|consen 138 NLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPAL-------GPYCVSKFAVEAFSDSLRRELR 197 (322)
T ss_pred hhhhHHHHHHHHHHHHHhccCeEEEecccccCccCccc-------ccchhhHHHHHHHHHHHHHHHH
Confidence 899999999999999976 7999999999998765421 1234578888888888877644
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.06 Score=49.03 Aligned_cols=75 Identities=9% Similarity=0.061 Sum_probs=37.1
Q ss_pred CCceeEEEeecCCHHH-H-HHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 8 NNNVRFHQLDILDQSS-I-HKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~-v-~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
..++.++..|++++.- + ++..+.+.+ .+|++||||+..... ..++...++|+.|+..+++.+...-.
T Consensus 59 ~~ri~~v~GDl~~~~lGL~~~~~~~L~~---~v~~IiH~Aa~v~~~------~~~~~~~~~NV~gt~~ll~la~~~~~-- 127 (249)
T PF07993_consen 59 LSRIEVVEGDLSQPNLGLSDEDYQELAE---EVDVIIHCAASVNFN------APYSELRAVNVDGTRNLLRLAAQGKR-- 127 (249)
T ss_dssp TTTEEEEE--TTSGGGG--HHHHHHHHH---H--EEEE--SS-SBS-------S--EEHHHHHHHHHHHHHHHTSSS---
T ss_pred hccEEEEeccccccccCCChHHhhcccc---ccceeeecchhhhhc------ccchhhhhhHHHHHHHHHHHHHhccC--
Confidence 5678999999988651 1 122333333 489999999876533 12333556777777777776553211
Q ss_pred ceEEEEec
Q psy2266 86 ARVVNVAS 93 (313)
Q Consensus 86 g~IV~isS 93 (313)
.++++|||
T Consensus 128 ~~~~~iST 135 (249)
T PF07993_consen 128 KRFHYIST 135 (249)
T ss_dssp --EEEEEE
T ss_pred cceEEecc
Confidence 15666665
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.026 Score=51.28 Aligned_cols=85 Identities=9% Similarity=0.020 Sum_probs=57.3
Q ss_pred HHHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc---
Q psy2266 75 CHILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG--- 150 (313)
Q Consensus 75 ~ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~--- 150 (313)
-++++..+ +.|..|+.++.... ....+ ...+|..+.++.+++++.+.+.+|++|+||||||.....++.
T Consensus 28 G~AIA~~la~~Ga~Vvlv~~~~~-l~~~~------~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~d~~~~~~~s 100 (227)
T TIGR02114 28 GKIITETFLSAGHEVTLVTTKRA-LKPEP------HPNLSIREIETTKDLLITLKELVQEHDILIHSMAVSDYTPVYMTD 100 (227)
T ss_pred HHHHHHHHHHCCCEEEEEcChhh-ccccc------CCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEeccccchhhCC
Confidence 34455444 45778887754211 11100 123677899999999999999999999999999987666653
Q ss_pred -hhhhhhhhcccccHHHHHH
Q psy2266 151 -QRAETTLATNFFALVTVCH 169 (313)
Q Consensus 151 -~~~~~~~~~N~~g~~~~~~ 169 (313)
++|+.+ +..+.+.+++
T Consensus 101 ~e~~~~~---~~~~~~~~~~ 117 (227)
T TIGR02114 101 LEQVQAS---DNLNEFLSKQ 117 (227)
T ss_pred HHHHhhh---cchhhhhccc
Confidence 566655 5556666655
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.024 Score=51.77 Aligned_cols=78 Identities=14% Similarity=0.178 Sum_probs=57.5
Q ss_pred CCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcC
Q psy2266 53 PGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNG 132 (313)
Q Consensus 53 ~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G 132 (313)
.+++.+.++-. +.+++.++|++.|.|+++|+||+++|..+...... ...+...+.++..+++.+...++
T Consensus 112 ~~~~~~~~~iN----~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~-------~~~Y~asKaal~~l~~~la~el~ 180 (258)
T PRK07370 112 REGFARALEIS----AYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPN-------YNVMGVAKAALEASVRYLAAELG 180 (258)
T ss_pred HHHHHHHheee----eHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcc-------cchhhHHHHHHHHHHHHHHHHhC
Confidence 34444444444 47889999999999988899999999876542221 12344577889999999999999
Q ss_pred CccEEEecc
Q psy2266 133 PLDKILDTA 141 (313)
Q Consensus 133 ~lD~Linna 141 (313)
+-.+.+|+.
T Consensus 181 ~~gI~Vn~i 189 (258)
T PRK07370 181 PKNIRVNAI 189 (258)
T ss_pred cCCeEEEEE
Confidence 877777773
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.073 Score=50.64 Aligned_cols=54 Identities=13% Similarity=0.098 Sum_probs=41.5
Q ss_pred CccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCcc
Q psy2266 133 PLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLG 189 (313)
Q Consensus 133 ~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~ 189 (313)
++|+++++|+...+....++-+..+++|+.|+..+.+++.. .+.++|++||...
T Consensus 68 ~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~---~~~~~v~~SS~~v 121 (347)
T PRK11908 68 KCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVK---YGKHLVFPSTSEV 121 (347)
T ss_pred CCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHh---cCCeEEEEeccee
Confidence 58999999997665544455567789999999988887664 2368999999754
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.1 Score=48.12 Aligned_cols=129 Identities=9% Similarity=0.003 Sum_probs=74.5
Q ss_pred ccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC-CcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccc
Q psy2266 112 NESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG-SFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM 190 (313)
Q Consensus 112 ~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~ 190 (313)
+|..+.+.++.+++. + ++|++||+|+..... .........+++|+.++..+.+++... .-+++|++||....
T Consensus 33 ~Dl~~~~~l~~~~~~----~-~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~i~~SS~~vy 105 (306)
T PLN02725 33 LDLTRQADVEAFFAK----E-KPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH--GVKKLLFLGSSCIY 105 (306)
T ss_pred CCCCCHHHHHHHHhc----c-CCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc--CCCeEEEeCceeec
Confidence 455566655554433 3 579999999875321 112233456889999998888877642 22589999996532
Q ss_pred cccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCC-CchhhhHHHHHHHHHHHHhhhccCCCCCCeEEE
Q psy2266 191 LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPE-FSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVN 269 (313)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn 269 (313)
- ..... ..+++.. . + ....+. ..|+.||.+...+.+.+.+. +++++.
T Consensus 106 g-~~~~~---------~~~E~~~-----------~--~--~~~~p~~~~Y~~sK~~~e~~~~~~~~~-------~~~~~~ 153 (306)
T PLN02725 106 P-KFAPQ---------PIPETAL-----------L--T--GPPEPTNEWYAIAKIAGIKMCQAYRIQ-------YGWDAI 153 (306)
T ss_pred C-CCCCC---------CCCHHHh-----------c--c--CCCCCCcchHHHHHHHHHHHHHHHHHH-------hCCCEE
Confidence 1 10000 0111110 0 0 001111 24999999998888554332 268888
Q ss_pred eecccccccc
Q psy2266 270 PVHPGYVNTD 279 (313)
Q Consensus 270 ~v~PG~v~T~ 279 (313)
.+-|+.|--+
T Consensus 154 ~~R~~~vyG~ 163 (306)
T PLN02725 154 SGMPTNLYGP 163 (306)
T ss_pred EEEecceeCC
Confidence 8888877555
|
|
| >KOG1014|consensus | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.0058 Score=57.67 Aligned_cols=61 Identities=8% Similarity=0.026 Sum_probs=37.8
Q ss_pred ccCCceEEEEecccccccCCCchhhhhh------hcccCCCHHHHHHHHHHHHHHcC--CccEEEeccCcCC
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQT------LFNESLTEDQLLDMMTDYVQYNG--PLDKILDTAMDTA 145 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~------~~~d~~~~~~~~~~~~~~~~~~G--~lD~Linna~~~~ 145 (313)
.++|-+++.||+..+.+.....+-.+.+ ...|-.+.+. .-+.+.+... ++.+||||+|...
T Consensus 70 AkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~---~ye~i~~~l~~~~VgILVNNvG~~~ 138 (312)
T KOG1014|consen 70 AKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE---VYEKLLEKLAGLDVGILVNNVGMSY 138 (312)
T ss_pred HHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch---hHHHHHHHhcCCceEEEEecccccC
Confidence 3567789999999888866654444433 2334343333 3334444443 5666999999976
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.059 Score=50.37 Aligned_cols=74 Identities=19% Similarity=0.115 Sum_probs=58.7
Q ss_pred EEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEe
Q psy2266 13 FHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 92 (313)
Q Consensus 13 ~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~is 92 (313)
++++|++|.+++.++++ +.|+++|.|+...... ....+..+++|+.|+-.+++++... .-.++|++|
T Consensus 49 ~~~~Di~d~~~l~~a~~-------g~d~V~H~Aa~~~~~~----~~~~~~~~~vNV~GT~nvl~aa~~~--~VkrlVytS 115 (280)
T PF01073_consen 49 YIQGDITDPESLEEALE-------GVDVVFHTAAPVPPWG----DYPPEEYYKVNVDGTRNVLEAARKA--GVKRLVYTS 115 (280)
T ss_pred EEEeccccHHHHHHHhc-------CCceEEEeCccccccC----cccHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEc
Confidence 88999999998887665 5799999999865432 2345778999999999999987653 336899999
Q ss_pred ccccccc
Q psy2266 93 SKLGMLY 99 (313)
Q Consensus 93 S~~~~~~ 99 (313)
|....-+
T Consensus 116 S~~vv~~ 122 (280)
T PF01073_consen 116 SISVVFD 122 (280)
T ss_pred CcceeEe
Confidence 9987654
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.17 Score=47.00 Aligned_cols=75 Identities=23% Similarity=0.165 Sum_probs=55.5
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
.+.++.+|++|.+++.++++ .+|++||+|+..... .+.++..+++|+.++..+++++.+. ..+++|
T Consensus 44 ~~~~~~~D~~~~~~l~~~~~-------~~d~vi~~a~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v 109 (328)
T TIGR03466 44 DVEIVEGDLRDPASLRKAVA-------GCRALFHVAADYRLW-----APDPEEMYAANVEGTRNLLRAALEA--GVERVV 109 (328)
T ss_pred CceEEEeeCCCHHHHHHHHh-------CCCEEEEeceecccC-----CCCHHHHHHHHHHHHHHHHHHHHHh--CCCeEE
Confidence 46778999999988776654 589999999864311 1335677889999999999987643 236899
Q ss_pred EEecccccc
Q psy2266 90 NVASKLGML 98 (313)
Q Consensus 90 ~isS~~~~~ 98 (313)
++||....-
T Consensus 110 ~~SS~~~~~ 118 (328)
T TIGR03466 110 YTSSVATLG 118 (328)
T ss_pred EEechhhcC
Confidence 999976543
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.093 Score=50.22 Aligned_cols=104 Identities=16% Similarity=0.074 Sum_probs=69.7
Q ss_pred hcccCCceEEEEeccccc------ccCCCchhhhhh-hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchh
Q psy2266 80 PLLRPHARVVNVASKLGM------LYNVPSQELRQT-LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQR 152 (313)
Q Consensus 80 ~~m~~~g~IV~isS~~~~------~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~ 152 (313)
.+++.|.+|.-..+..+. +.+.+...-+.. +.+|..+.++....++ +.|++++.|-........ .
T Consensus 25 ~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------gcdgVfH~Asp~~~~~~~-~ 96 (327)
T KOG1502|consen 25 LLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------GCDGVFHTASPVDFDLED-P 96 (327)
T ss_pred HHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------CCCEEEEeCccCCCCCCC-c
Confidence 455678888877776665 333332222233 4567778877665554 599999999876655443 3
Q ss_pred hhhhhhcccccHHHHHHHHhhcccCC-CceEEecCCcccccc
Q psy2266 153 AETTLATNFFALVTVCHILFPLLRPH-ARVVNVASKLGMLYN 193 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l~~~-g~iv~vss~~~~~~~ 193 (313)
-.+.++..+.|+..+.++.... +. .|||++||.++..+.
T Consensus 97 e~~li~pav~Gt~nVL~ac~~~--~sVkrvV~TSS~aAv~~~ 136 (327)
T KOG1502|consen 97 EKELIDPAVKGTKNVLEACKKT--KSVKRVVYTSSTAAVRYN 136 (327)
T ss_pred HHhhhhHHHHHHHHHHHHHhcc--CCcceEEEeccHHHhccC
Confidence 3368899999998887776541 12 689999999997654
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.077 Score=49.22 Aligned_cols=73 Identities=10% Similarity=0.057 Sum_probs=50.9
Q ss_pred EEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEe
Q psy2266 13 FHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 92 (313)
Q Consensus 13 ~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~is 92 (313)
.+..|+++.+.++.+.+. .++++|++||+||..... .++.+..+++|+.++..+.+++... +.++|++|
T Consensus 45 ~~~~d~~~~~~~~~~~~~---~~~~~D~vvh~A~~~~~~-----~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~v~~S 113 (314)
T TIGR02197 45 VIADYIDKEDFLDRLEKG---AFGKIEAIFHQGACSDTT-----ETDGEYMMENNYQYSKRLLDWCAEK---GIPFIYAS 113 (314)
T ss_pred eeeccCcchhHHHHHHhh---ccCCCCEEEECccccCcc-----ccchHHHHHHHHHHHHHHHHHHHHh---CCcEEEEc
Confidence 345677776555544432 357899999999974321 2345678899999999999987652 35799999
Q ss_pred cccc
Q psy2266 93 SKLG 96 (313)
Q Consensus 93 S~~~ 96 (313)
|...
T Consensus 114 S~~v 117 (314)
T TIGR02197 114 SAAT 117 (314)
T ss_pred cHHh
Confidence 8653
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.23 Score=47.03 Aligned_cols=145 Identities=12% Similarity=0.049 Sum_probs=82.8
Q ss_pred HHHhcccCCceEEEEecccccccCC-CchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhh
Q psy2266 77 ILFPLLRPHARVVNVASKLGMLYNV-PSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAET 155 (313)
Q Consensus 77 a~~~~m~~~g~IV~isS~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~ 155 (313)
.+..+++.|..+|.+.-....-.+. ...+ ......|..|.+.+.+..++. ++|.+++-||-..=+-.-+.=..
T Consensus 16 tv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-~~f~~gDi~D~~~L~~vf~~~-----~idaViHFAa~~~VgESv~~Pl~ 89 (329)
T COG1087 16 TVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-FKFYEGDLLDRALLTAVFEEN-----KIDAVVHFAASISVGESVQNPLK 89 (329)
T ss_pred HHHHHHHCCCeEEEEecCCCCCHHHhhhcc-CceEEeccccHHHHHHHHHhc-----CCCEEEECccccccchhhhCHHH
Confidence 3344455676777664332221111 1100 223455777777666655443 89999999997766555555567
Q ss_pred hhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCC
Q psy2266 156 TLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWP 235 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (313)
.++-|+.|+..+++++.. .+-+-+..||.++....+..-.+ . | +.+..+
T Consensus 90 Yy~NNv~gTl~Ll~am~~---~gv~~~vFSStAavYG~p~~~PI--------~-E-------------------~~~~~p 138 (329)
T COG1087 90 YYDNNVVGTLNLIEAMLQ---TGVKKFIFSSTAAVYGEPTTSPI--------S-E-------------------TSPLAP 138 (329)
T ss_pred HHhhchHhHHHHHHHHHH---hCCCEEEEecchhhcCCCCCccc--------C-C-------------------CCCCCC
Confidence 899999999988776543 23233445555554322221110 0 0 001224
Q ss_pred CCchhhhHHHHHHHHHHHHhhhc
Q psy2266 236 EFSYSVSKLGVAKLSFIQHATLS 258 (313)
Q Consensus 236 ~~~Y~~sK~al~~l~~~~~~~l~ 258 (313)
..+|+.||..++.+.+.+++...
T Consensus 139 ~NPYG~sKlm~E~iL~d~~~a~~ 161 (329)
T COG1087 139 INPYGRSKLMSEEILRDAAKANP 161 (329)
T ss_pred CCcchhHHHHHHHHHHHHHHhCC
Confidence 45699999999999977666543
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.033 Score=52.54 Aligned_cols=61 Identities=11% Similarity=0.135 Sum_probs=29.1
Q ss_pred eEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 12 ~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
.++.+|+.|.+.++++++. .++|+++|.|..=... .+++...+.+++|+.|+..+.+++..
T Consensus 57 ~~vigDvrd~~~l~~~~~~-----~~pdiVfHaAA~KhVp---l~E~~p~eav~tNv~GT~nv~~aa~~ 117 (293)
T PF02719_consen 57 VPVIGDVRDKERLNRIFEE-----YKPDIVFHAAALKHVP---LMEDNPFEAVKTNVLGTQNVAEAAIE 117 (293)
T ss_dssp E--CTSCCHHHHHHHHTT-------T-SEEEE------HH---HHCCCHHHHHHHHCHHHHHHHHHHHH
T ss_pred CceeecccCHHHHHHHHhh-----cCCCEEEEChhcCCCC---hHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 3457899988877766652 2699999988763211 11122233455555555555554443
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.039 Score=47.96 Aligned_cols=117 Identities=15% Similarity=0.142 Sum_probs=84.3
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhhcccCCCceEEec
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 185 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vs 185 (313)
..+|..++++++++++.+.+++|++|++|++||.+...++. ++++.++...+.|...+.+.+-+ .+-..+|.+|
T Consensus 58 ~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~--~~l~~~i~~S 135 (181)
T PF08659_consen 58 VQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN--RPLDFFILFS 135 (181)
T ss_dssp EE--TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT--TTTSEEEEEE
T ss_pred eccCccCHHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc--CCCCeEEEEC
Confidence 46688899999999999999999999999999998877763 67899999999999999888876 3336789999
Q ss_pred CCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCC
Q psy2266 186 SKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPD 265 (313)
Q Consensus 186 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~g 265 (313)
|.++.+ +..+...|+++.+.+..+++. .... |
T Consensus 136 Sis~~~----------------------------------------G~~gq~~YaaAN~~lda~a~~----~~~~----g 167 (181)
T PF08659_consen 136 SISSLL----------------------------------------GGPGQSAYAAANAFLDALARQ----RRSR----G 167 (181)
T ss_dssp EHHHHT----------------------------------------T-TTBHHHHHHHHHHHHHHHH----HHHT----T
T ss_pred ChhHhc----------------------------------------cCcchHhHHHHHHHHHHHHHH----HHhC----C
Confidence 999876 345566799999999998854 3333 6
Q ss_pred eEEEeeccccc
Q psy2266 266 IIVNPVHPGYV 276 (313)
Q Consensus 266 I~vn~v~PG~v 276 (313)
..+.+|+-|..
T Consensus 168 ~~~~sI~wg~W 178 (181)
T PF08659_consen 168 LPAVSINWGAW 178 (181)
T ss_dssp SEEEEEEE-EB
T ss_pred CCEEEEEcccc
Confidence 67777776643
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.085 Score=49.52 Aligned_cols=70 Identities=19% Similarity=0.232 Sum_probs=53.6
Q ss_pred EeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEecc
Q psy2266 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASK 94 (313)
Q Consensus 15 ~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS~ 94 (313)
.+|++|.+.+.++++.. ++|++||+|++.... ..+.+-+..+.+|..++..+.++... -|..+|++|+-
T Consensus 33 ~~Ditd~~~v~~~i~~~-----~PDvVIn~AAyt~vD---~aE~~~e~A~~vNa~~~~~lA~aa~~---~ga~lVhiSTD 101 (281)
T COG1091 33 ELDITDPDAVLEVIRET-----RPDVVINAAAYTAVD---KAESEPELAFAVNATGAENLARAAAE---VGARLVHISTD 101 (281)
T ss_pred cccccChHHHHHHHHhh-----CCCEEEECccccccc---cccCCHHHHHHhHHHHHHHHHHHHHH---hCCeEEEeecc
Confidence 47999999998888865 699999999997643 22233467889999999988887543 26788999864
Q ss_pred c
Q psy2266 95 L 95 (313)
Q Consensus 95 ~ 95 (313)
.
T Consensus 102 y 102 (281)
T COG1091 102 Y 102 (281)
T ss_pred e
Confidence 4
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.36 Score=46.70 Aligned_cols=165 Identities=13% Similarity=0.007 Sum_probs=88.9
Q ss_pred HHHHHhccc-CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc-hh
Q psy2266 75 CHILFPLLR-PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG-QR 152 (313)
Q Consensus 75 ~ra~~~~m~-~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~-~~ 152 (313)
-+++++.+. .+..|+.+++......+.. ........+|..+.+.....+ .++|+++|+|+......+. ..
T Consensus 34 G~~l~~~L~~~G~~V~~v~r~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~-------~~~D~Vih~Aa~~~~~~~~~~~ 105 (370)
T PLN02695 34 ASHIARRLKAEGHYIIASDWKKNEHMSED-MFCHEFHLVDLRVMENCLKVT-------KGVDHVFNLAADMGGMGFIQSN 105 (370)
T ss_pred HHHHHHHHHhCCCEEEEEEeccccccccc-cccceEEECCCCCHHHHHHHH-------hCCCEEEEcccccCCccccccC
Confidence 344555553 4567777765322111100 001122345666665544433 2579999999876543332 23
Q ss_pred hhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccC
Q psy2266 153 AETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEA 232 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (313)
....+..|+.++..+++++.- ..-.++|++||...+-.. .... ....++ + +....
T Consensus 106 ~~~~~~~N~~~t~nll~aa~~--~~vk~~V~~SS~~vYg~~-~~~~-----~~~~~~----------------E-~~~~p 160 (370)
T PLN02695 106 HSVIMYNNTMISFNMLEAARI--NGVKRFFYASSACIYPEF-KQLE-----TNVSLK----------------E-SDAWP 160 (370)
T ss_pred chhhHHHHHHHHHHHHHHHHH--hCCCEEEEeCchhhcCCc-cccC-----cCCCcC----------------c-ccCCC
Confidence 344577899999888887542 112589999997532210 0000 000000 0 00011
Q ss_pred CCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccc
Q psy2266 233 GWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD 279 (313)
Q Consensus 233 ~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~ 279 (313)
..+...|+.+|.+...+++.++.. +|+.+..+-|+.|--|
T Consensus 161 ~~p~s~Yg~sK~~~E~~~~~~~~~-------~g~~~~ilR~~~vyGp 200 (370)
T PLN02695 161 AEPQDAYGLEKLATEELCKHYTKD-------FGIECRIGRFHNIYGP 200 (370)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH-------hCCCEEEEEECCccCC
Confidence 223446999999999998654433 2788888888877655
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.67 Score=46.85 Aligned_cols=73 Identities=16% Similarity=0.134 Sum_probs=49.3
Q ss_pred CceeEEEeecCCH-------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 9 NNVRFHQLDILDQ-------SSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 9 ~~~~~~~~Dvs~~-------~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
.++.++..|++++ +.+++++ + .+|++||+|+..... +..+..+++|+.++..+.+++...
T Consensus 84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~----~---~vD~ViH~AA~v~~~------~~~~~~~~~Nv~gt~~ll~~a~~~ 150 (491)
T PLN02996 84 EKVTPVPGDISYDDLGVKDSNLREEMW----K---EIDIVVNLAATTNFD------ERYDVALGINTLGALNVLNFAKKC 150 (491)
T ss_pred cCEEEEecccCCcCCCCChHHHHHHHH----h---CCCEEEECccccCCc------CCHHHHHHHHHHHHHHHHHHHHhc
Confidence 4688899999843 2233332 2 589999999976522 234667889999999988876542
Q ss_pred ccCCceEEEEeccc
Q psy2266 82 LRPHARVVNVASKL 95 (313)
Q Consensus 82 m~~~g~IV~isS~~ 95 (313)
..-.++|++||..
T Consensus 151 -~~~k~~V~vST~~ 163 (491)
T PLN02996 151 -VKVKMLLHVSTAY 163 (491)
T ss_pred -CCCCeEEEEeeeE
Confidence 1224777777754
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.058 Score=50.64 Aligned_cols=67 Identities=12% Similarity=0.093 Sum_probs=59.9
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
..+|..+.++++++++.+.+ +|++|+||||||.....++ .++|+.++++|+.|++.+++.++|+|++
T Consensus 67 ~~~Dv~d~~~~~~~~~~~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~ 137 (306)
T PRK07792 67 VAGDISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRA 137 (306)
T ss_pred EeCCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 46688899999999999999 9999999999999876654 3689999999999999999999999964
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.4 Score=45.02 Aligned_cols=70 Identities=17% Similarity=0.188 Sum_probs=56.5
Q ss_pred ccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCcc
Q psy2266 112 NESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLG 189 (313)
Q Consensus 112 ~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~ 189 (313)
.|..+.+.+.+++... +.|++||+|....--..+.+-+..+.+|..|+-.++++.- +-+..+|++|+...
T Consensus 34 ~Ditd~~~v~~~i~~~-----~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~---~~ga~lVhiSTDyV 103 (281)
T COG1091 34 LDITDPDAVLEVIRET-----RPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAA---EVGARLVHISTDYV 103 (281)
T ss_pred ccccChHHHHHHHHhh-----CCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHH---HhCCeEEEeecceE
Confidence 4667888888877776 8999999999887777777778999999999999887764 23567899998765
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.039 Score=65.51 Aligned_cols=124 Identities=11% Similarity=-0.005 Sum_probs=105.4
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCceEEec
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 185 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vs 185 (313)
..+|..|.++++++++.+.++ |++|+||||||....+++ .++|+.+|++|+.|.+.+.+++.+.+. ++||++|
T Consensus 2099 ~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~~--~~IV~~S 2175 (2582)
T TIGR02813 2099 ASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAENI--KLLALFS 2175 (2582)
T ss_pred EEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEe
Confidence 456888999999999999887 789999999999877765 378999999999999999999988543 5799999
Q ss_pred CCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCC
Q psy2266 186 SKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPD 265 (313)
Q Consensus 186 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~g 265 (313)
|.++.. +..+...|+++|.+++++++.++.++. +
T Consensus 2176 Svag~~----------------------------------------G~~gqs~YaaAkaaL~~la~~la~~~~------~ 2209 (2582)
T TIGR02813 2176 SAAGFY----------------------------------------GNTGQSDYAMSNDILNKAALQLKALNP------S 2209 (2582)
T ss_pred chhhcC----------------------------------------CCCCcHHHHHHHHHHHHHHHHHHHHcC------C
Confidence 999876 233445699999999999987777642 6
Q ss_pred eEEEeeccccccccccc
Q psy2266 266 IIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 266 I~vn~v~PG~v~T~~~~ 282 (313)
|+|++|+||+++|+|..
T Consensus 2210 irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813 2210 AKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred cEEEEEECCeecCCccc
Confidence 99999999999999853
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.13 Score=48.03 Aligned_cols=93 Identities=13% Similarity=0.161 Sum_probs=56.7
Q ss_pred HHHHHHhcccCCc-eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchh
Q psy2266 74 VCHILFPLLRPHA-RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQR 152 (313)
Q Consensus 74 l~ra~~~~m~~~g-~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~ 152 (313)
+-+++...+++.+ .++.+++. ..|..+.+++.++++.. +.|++||+|+..........
T Consensus 12 lG~~l~~~l~~~~~~v~~~~r~----------------~~dl~d~~~~~~~~~~~-----~pd~Vin~aa~~~~~~ce~~ 70 (286)
T PF04321_consen 12 LGSALARALKERGYEVIATSRS----------------DLDLTDPEAVAKLLEAF-----KPDVVINCAAYTNVDACEKN 70 (286)
T ss_dssp HHHHHHHHHTTTSEEEEEESTT----------------CS-TTSHHHHHHHHHHH-------SEEEE------HHHHHHS
T ss_pred HHHHHHHHHhhCCCEEEEeCch----------------hcCCCCHHHHHHHHHHh-----CCCeEeccceeecHHhhhhC
Confidence 3455556665543 56655433 23455666666666544 48999999998765555666
Q ss_pred hhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccc
Q psy2266 153 AETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM 190 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~ 190 (313)
-+..+++|+.++..+.+.... .+.++|++||....
T Consensus 71 p~~a~~iN~~~~~~la~~~~~---~~~~li~~STd~VF 105 (286)
T PF04321_consen 71 PEEAYAINVDATKNLAEACKE---RGARLIHISTDYVF 105 (286)
T ss_dssp HHHHHHHHTHHHHHHHHHHHH---CT-EEEEEEEGGGS
T ss_pred hhhhHHHhhHHHHHHHHHHHH---cCCcEEEeeccEEE
Confidence 778999999999888877763 45799999998643
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.047 Score=49.11 Aligned_cols=59 Identities=12% Similarity=0.049 Sum_probs=47.3
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 111 FNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 111 ~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
.+|..+++++....+ +++|+++||||....+++ .+.|+..+++|+.|++.+++.++|.|
T Consensus 57 ~~D~~~~~~~~~~~~------~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 119 (257)
T PRK09291 57 KLDLTDAIDRAQAAE------WDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKM 119 (257)
T ss_pred EeeCCCHHHHHHHhc------CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 457677777655432 589999999998876665 36788999999999999999999855
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.051 Score=47.75 Aligned_cols=148 Identities=21% Similarity=0.218 Sum_probs=107.2
Q ss_pred ceEEEEecccccccCCCchhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcc
Q psy2266 86 ARVVNVASKLGMLYNVPSQELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATN 160 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N 160 (313)
..|+.+++.............. +...+|..+.++++++++ .++++|+++++||.....++ .++|..++++|
T Consensus 27 ~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n 102 (227)
T PRK08219 27 HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVE----QLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVN 102 (227)
T ss_pred CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHH----hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHH
Confidence 6677777654332111100001 123456678777766554 45689999999998765543 36789999999
Q ss_pred cccHHHHHHHHhhcccC-CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCch
Q psy2266 161 FFALVTVCHILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSY 239 (313)
Q Consensus 161 ~~g~~~~~~~~~p~l~~-~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 239 (313)
+.+.+.+++.+++.|++ .++++++||..+... ..+...|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~----------------------------------------~~~~~~y 142 (227)
T PRK08219 103 VVAPAELTRLLLPALRAAHGHVVFINSGAGLRA----------------------------------------NPGWGSY 142 (227)
T ss_pred hHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCc----------------------------------------CCCCchH
Confidence 99999999999998876 489999999887541 2334569
Q ss_pred hhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 240 SVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 240 ~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+.+|.++..+++.++.++. .. |++++|.||++.|++..
T Consensus 143 ~~~K~a~~~~~~~~~~~~~----~~-i~~~~i~pg~~~~~~~~ 180 (227)
T PRK08219 143 AASKFALRALADALREEEP----GN-VRVTSVHPGRTDTDMQR 180 (227)
T ss_pred HHHHHHHHHHHHHHHHHhc----CC-ceEEEEecCCccchHhh
Confidence 9999999999988776654 22 99999999999998654
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.086 Score=49.70 Aligned_cols=82 Identities=18% Similarity=0.121 Sum_probs=53.4
Q ss_pred HHHHHhHHHHHHHHHHHHHHhcccC-CceEEEEecccccccCCCchhhh-----hhhcccCCCHHHHHHHHHHHHHHc--
Q psy2266 60 AETTLATNFFALVTVCHILFPLLRP-HARVVNVASKLGMLYNVPSQELR-----QTLFNESLTEDQLLDMMTDYVQYN-- 131 (313)
Q Consensus 60 ~~~~~~vNl~~~i~l~ra~~~~m~~-~g~IV~isS~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~~~~~~-- 131 (313)
|+.++++|+.+++.+++.+.|.|++ .++||+++|..+.......+.+. ........++-+...++..+..++
T Consensus 116 ~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~ 195 (313)
T PRK05854 116 FELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRA 195 (313)
T ss_pred HHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhc
Confidence 4567899999999999999999975 58999999988754322111111 001223345566777777777653
Q ss_pred CCccEEEecc
Q psy2266 132 GPLDKILDTA 141 (313)
Q Consensus 132 G~lD~Linna 141 (313)
++-.+.+|+.
T Consensus 196 ~~~gI~v~~v 205 (313)
T PRK05854 196 AGWGITSNLA 205 (313)
T ss_pred CCCCeEEEEE
Confidence 3444555553
|
|
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.65 Score=44.41 Aligned_cols=63 Identities=14% Similarity=0.201 Sum_probs=43.7
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCCChhHHHHHHHhHHHHHHHHHHHHHH
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFGQRAETTLATNFFALVTVCHILF 79 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~~~~~~~~~~~~~~vNl~~~i~l~ra~~ 79 (313)
+..+.+++.|+.|.+.++++|+... +|-|+|-|+-...+ ..... .+-.+.|+.|.+.++..+.
T Consensus 53 ~~~v~f~~~Dl~D~~~L~kvF~~~~-----fd~V~Hfa~~~~vgeS~~~p----~~Y~~nNi~gtlnlLe~~~ 116 (343)
T KOG1371|consen 53 GKSVFFVEGDLNDAEALEKLFSEVK-----FDAVMHFAALAAVGESMENP----LSYYHNNIAGTLNLLEVMK 116 (343)
T ss_pred CCceEEEEeccCCHHHHHHHHhhcC-----CceEEeehhhhccchhhhCc----hhheehhhhhHHHHHHHHH
Confidence 4678999999999999999888643 89999999876543 11111 2334566677766665543
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.99 Score=41.28 Aligned_cols=78 Identities=22% Similarity=0.207 Sum_probs=54.1
Q ss_pred CCCceeEE---EeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 7 NNNNVRFH---QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 7 ~g~~~~~~---~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
.|.++..+ .+|+.+.++++++++. .++|++||+||...... .....+..+++|+.++..+.+++...
T Consensus 22 ~g~~v~~~~r~~~d~~~~~~~~~~~~~-----~~~d~vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~-- 91 (287)
T TIGR01214 22 EGRVVVALTSSQLDLTDPEALERLLRA-----IRPDAVVNTAAYTDVDG---AESDPEKAFAVNALAPQNLARAAARH-- 91 (287)
T ss_pred cCCEEEEeCCcccCCCCHHHHHHHHHh-----CCCCEEEECCccccccc---cccCHHHHHHHHHHHHHHHHHHHHHc--
Confidence 34444432 4799998888777654 25899999999764221 11234567889999999999986542
Q ss_pred CCceEEEEeccc
Q psy2266 84 PHARVVNVASKL 95 (313)
Q Consensus 84 ~~g~IV~isS~~ 95 (313)
+.++|++||..
T Consensus 92 -~~~~v~~Ss~~ 102 (287)
T TIGR01214 92 -GARLVHISTDY 102 (287)
T ss_pred -CCeEEEEeeee
Confidence 35899999864
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.11 Score=46.25 Aligned_cols=57 Identities=14% Similarity=0.145 Sum_probs=49.0
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHH
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVT 166 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~ 166 (313)
+.+|..+++++.++++.+.+.+|++|++++|||.....++ .++|+.++++|+.|++.
T Consensus 60 ~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 120 (245)
T PRK12937 60 VQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFV 120 (245)
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHH
Confidence 4678889999999999999999999999999998765554 36789999999998744
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.18 Score=46.86 Aligned_cols=75 Identities=13% Similarity=0.197 Sum_probs=50.5
Q ss_pred EeecCCHHHHHHHHHHHHH--HcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEe
Q psy2266 15 QLDILDQSSIHKLHDDIQT--QHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 92 (313)
Q Consensus 15 ~~Dvs~~~~v~~~~~~v~~--~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~is 92 (313)
.+|+.|..+.+.+++.+.+ .++++|++||+||...... .. -+..++.|+.++..+++++... +.++|++|
T Consensus 44 ~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~---~~--~~~~~~~n~~~t~~ll~~~~~~---~~~~i~~S 115 (308)
T PRK11150 44 DLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSSTTE---WD--GKYMMDNNYQYSKELLHYCLER---EIPFLYAS 115 (308)
T ss_pred hhhhhhhhhHHHHHHHHhcccccCCccEEEECceecCCcC---CC--hHHHHHHHHHHHHHHHHHHHHc---CCcEEEEc
Confidence 4566666665665555432 3568999999998644221 11 1346899999999999987652 34799999
Q ss_pred ccccc
Q psy2266 93 SKLGM 97 (313)
Q Consensus 93 S~~~~ 97 (313)
|....
T Consensus 116 S~~vy 120 (308)
T PRK11150 116 SAATY 120 (308)
T ss_pred chHHh
Confidence 87543
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.13 Score=48.07 Aligned_cols=72 Identities=19% Similarity=0.254 Sum_probs=46.5
Q ss_pred EeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEecc
Q psy2266 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASK 94 (313)
Q Consensus 15 ~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS~ 94 (313)
.+|+.|.+++.++++.. ++|++||+||+... +..+..-+..+++|..++..|.+++.. .+.++|++||.
T Consensus 34 ~~dl~d~~~~~~~~~~~-----~pd~Vin~aa~~~~---~~ce~~p~~a~~iN~~~~~~la~~~~~---~~~~li~~STd 102 (286)
T PF04321_consen 34 DLDLTDPEAVAKLLEAF-----KPDVVINCAAYTNV---DACEKNPEEAYAINVDATKNLAEACKE---RGARLIHISTD 102 (286)
T ss_dssp CS-TTSHHHHHHHHHHH-------SEEEE------H---HHHHHSHHHHHHHHTHHHHHHHHHHHH---CT-EEEEEEEG
T ss_pred hcCCCCHHHHHHHHHHh-----CCCeEeccceeecH---HhhhhChhhhHHHhhHHHHHHHHHHHH---cCCcEEEeecc
Confidence 68999988888777654 48999999998642 122345567889999999888887654 36799999997
Q ss_pred ccc
Q psy2266 95 LGM 97 (313)
Q Consensus 95 ~~~ 97 (313)
.-.
T Consensus 103 ~VF 105 (286)
T PF04321_consen 103 YVF 105 (286)
T ss_dssp GGS
T ss_pred EEE
Confidence 533
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=93.63 E-value=1.3 Score=42.26 Aligned_cols=76 Identities=16% Similarity=0.089 Sum_probs=53.3
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
++.++.+|+.|.+++.++++ .+|++||.|+...... .. ++-...+++|+.++..+.+++... .-.++|
T Consensus 70 ~~~~~~~Di~d~~~l~~~~~-------~~d~ViHlAa~~~~~~--~~-~~~~~~~~~Nv~gt~nll~~~~~~--~~~~~v 137 (348)
T PRK15181 70 RFIFIQGDIRKFTDCQKACK-------NVDYVLHQAALGSVPR--SL-KDPIATNSANIDGFLNMLTAARDA--HVSSFT 137 (348)
T ss_pred ceEEEEccCCCHHHHHHHhh-------CCCEEEECccccCchh--hh-hCHHHHHHHHHHHHHHHHHHHHHc--CCCeEE
Confidence 46678899999877666553 4899999999754211 11 222346889999999999987542 235899
Q ss_pred EEeccccc
Q psy2266 90 NVASKLGM 97 (313)
Q Consensus 90 ~isS~~~~ 97 (313)
++||....
T Consensus 138 ~~SS~~vy 145 (348)
T PRK15181 138 YAASSSTY 145 (348)
T ss_pred EeechHhh
Confidence 99987543
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.31 Score=47.14 Aligned_cols=73 Identities=22% Similarity=0.314 Sum_probs=50.7
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
++.++.+|+.|.+++.++++ .+|++||+|+......... .-...+..|+.++..+++++... +.++|
T Consensus 66 ~~~~~~~Dl~d~~~l~~~~~-------~~d~ViHlAa~~~~~~~~~---~~~~~~~~n~~gt~~ll~aa~~~---~~r~v 132 (386)
T PLN02427 66 RIQFHRINIKHDSRLEGLIK-------MADLTINLAAICTPADYNT---RPLDTIYSNFIDALPVVKYCSEN---NKRLI 132 (386)
T ss_pred CeEEEEcCCCChHHHHHHhh-------cCCEEEEcccccChhhhhh---ChHHHHHHHHHHHHHHHHHHHhc---CCEEE
Confidence 57788999999887766553 3799999999754321111 11233557999999888876532 36899
Q ss_pred EEeccc
Q psy2266 90 NVASKL 95 (313)
Q Consensus 90 ~isS~~ 95 (313)
++||..
T Consensus 133 ~~SS~~ 138 (386)
T PLN02427 133 HFSTCE 138 (386)
T ss_pred EEeeee
Confidence 999964
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=93.31 E-value=0.22 Score=49.55 Aligned_cols=54 Identities=17% Similarity=0.198 Sum_probs=40.5
Q ss_pred CccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCcc
Q psy2266 133 PLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLG 189 (313)
Q Consensus 133 ~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~ 189 (313)
++|+++++|+.........+-...+++|+.|+..+.+++.-. +.++|++||...
T Consensus 184 ~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~---g~r~V~~SS~~V 237 (436)
T PLN02166 184 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV---GARFLLTSTSEV 237 (436)
T ss_pred CCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh---CCEEEEECcHHH
Confidence 689999999876544443444678999999999988776542 358999988754
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=93.31 E-value=0.13 Score=48.84 Aligned_cols=131 Identities=11% Similarity=0.053 Sum_probs=83.1
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhc-ccCCCceEEecCCc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPL-LRPHARVVNVASKL 188 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~-l~~~g~iv~vss~~ 188 (313)
..+|..|.+++.++++.+ ++|+++|+|+........+.-...+++|+.|+..+++++.+. +++..++|++||..
T Consensus 60 ~~~Dl~d~~~l~~~~~~~-----~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~ 134 (343)
T TIGR01472 60 HYGDLTDSSNLRRIIDEI-----KPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSE 134 (343)
T ss_pred EEeccCCHHHHHHHHHhC-----CCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHH
Confidence 346777888877777664 589999999976544333334567789999999999998873 33335789999975
Q ss_pred cccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEE
Q psy2266 189 GMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIV 268 (313)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~v 268 (313)
..-.. ... ..++ +. ...+...|+.||.+.+.+++.++....-.. ..++.+
T Consensus 135 vyg~~-~~~---------~~~E-----------------~~--~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~-~~~~~~ 184 (343)
T TIGR01472 135 LYGKV-QEI---------PQNE-----------------TT--PFYPRSPYAAAKLYAHWITVNYREAYGLFA-VNGILF 184 (343)
T ss_pred hhCCC-CCC---------CCCC-----------------CC--CCCCCChhHHHHHHHHHHHHHHHHHhCCce-EEEeec
Confidence 43211 000 0000 00 122445699999999999987766543221 123455
Q ss_pred Eeecccc
Q psy2266 269 NPVHPGY 275 (313)
Q Consensus 269 n~v~PG~ 275 (313)
|...||.
T Consensus 185 ~~~gp~~ 191 (343)
T TIGR01472 185 NHESPRR 191 (343)
T ss_pred ccCCCCC
Confidence 6666763
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.30 E-value=0.71 Score=47.23 Aligned_cols=62 Identities=18% Similarity=0.266 Sum_probs=38.9
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHH
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHIL 78 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~ 78 (313)
.+..++-+||.|.+.++++++. | ++|+++|.|..=.- ..++....+.+++|++|+.++.+++
T Consensus 302 ~~~~~~igdVrD~~~~~~~~~~----~-kvd~VfHAAA~KHV---Pl~E~nP~Eai~tNV~GT~nv~~aa 363 (588)
T COG1086 302 LKLRFYIGDVRDRDRVERAMEG----H-KVDIVFHAAALKHV---PLVEYNPEEAIKTNVLGTENVAEAA 363 (588)
T ss_pred cceEEEecccccHHHHHHHHhc----C-CCceEEEhhhhccC---cchhcCHHHHHHHhhHhHHHHHHHH
Confidence 5677889999999887766553 2 59999998876332 1222233444555555555555543
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=93.23 E-value=1.6 Score=42.58 Aligned_cols=114 Identities=17% Similarity=0.050 Sum_probs=71.4
Q ss_pred CCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCc-eEEecCCccccccccChhhhhhhhccccch
Q psy2266 132 GPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHAR-VVNVASKLGMLYNVPSQELRQTLFNESLTE 210 (313)
Q Consensus 132 G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~-iv~vss~~~~~~~~~~~~~~~~~~~~~~~~ 210 (313)
..+|.+++||..-- .-.+.......|+.|+..+.+...- .+++ +.+|||.+..-...+..+...+- +
T Consensus 86 ~~vD~I~H~gA~Vn---~v~pYs~L~~~NVlGT~evlrLa~~---gk~Kp~~yVSsisv~~~~~~~~~~~~~~--~---- 153 (382)
T COG3320 86 ENVDLIIHNAALVN---HVFPYSELRGANVLGTAEVLRLAAT---GKPKPLHYVSSISVGETEYYSNFTVDFD--E---- 153 (382)
T ss_pred hhcceEEecchhhc---ccCcHHHhcCcchHhHHHHHHHHhc---CCCceeEEEeeeeeccccccCCCccccc--c----
Confidence 35899999975321 1234567888999999888776653 2334 89999988754333332111110 0
Q ss_pred HHHHHHHHHHHHHhhhcccccC-CCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 211 DQLLDMMTDYVQLAKEGKDKEA-GWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
.+++-.. ......|+-||-+-+.++ ++.... |+++..+-||+|--+-
T Consensus 154 ---------------~~~~~~~~~~~~~GY~~SKwvaE~Lv----r~A~~r----GLpv~I~Rpg~I~gds 201 (382)
T COG3320 154 ---------------ISPTRNVGQGLAGGYGRSKWVAEKLV----REAGDR----GLPVTIFRPGYITGDS 201 (382)
T ss_pred ---------------ccccccccCccCCCcchhHHHHHHHH----HHHhhc----CCCeEEEecCeeeccC
Confidence 0011111 112245999999999988 776655 9999999999985443
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.44 Score=44.71 Aligned_cols=81 Identities=12% Similarity=0.087 Sum_probs=51.6
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
+.|.++.....|+.+.+.+...++. .++|++||+||...........+.-...+++|+.++..+++++... +
T Consensus 31 ~~g~~V~~~~~~~~~~~~v~~~l~~-----~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~---g 102 (298)
T PLN02778 31 EQGIDFHYGSGRLENRASLEADIDA-----VKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER---G 102 (298)
T ss_pred hCCCEEEEecCccCCHHHHHHHHHh-----cCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh---C
Confidence 3465665566788887666555443 2689999999986532111111333567889999999999988653 2
Q ss_pred ceEEEEecc
Q psy2266 86 ARVVNVASK 94 (313)
Q Consensus 86 g~IV~isS~ 94 (313)
.+.|++||.
T Consensus 103 v~~v~~sS~ 111 (298)
T PLN02778 103 LVLTNYATG 111 (298)
T ss_pred CCEEEEecc
Confidence 234555543
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.44 Score=49.79 Aligned_cols=80 Identities=14% Similarity=0.101 Sum_probs=54.2
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
.|.++.+...|++|.+.+..+++.. ++|++||+|+.......+...+.-...+++|+.++..|.+++... +.
T Consensus 403 ~g~~v~~~~~~l~d~~~v~~~i~~~-----~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~---g~ 474 (668)
T PLN02260 403 QGIAYEYGKGRLEDRSSLLADIRNV-----KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN---GL 474 (668)
T ss_pred CCCeEEeeccccccHHHHHHHHHhh-----CCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc---CC
Confidence 3445545567888888776665542 589999999986532222222445678899999999999988653 34
Q ss_pred eEEEEecc
Q psy2266 87 RVVNVASK 94 (313)
Q Consensus 87 ~IV~isS~ 94 (313)
+.|++||.
T Consensus 475 ~~v~~Ss~ 482 (668)
T PLN02260 475 LMMNFATG 482 (668)
T ss_pred eEEEEccc
Confidence 56666553
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.27 Score=48.97 Aligned_cols=55 Identities=16% Similarity=0.157 Sum_probs=41.5
Q ss_pred CccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccc
Q psy2266 133 PLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM 190 (313)
Q Consensus 133 ~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~ 190 (313)
.+|+++|+|+...+.....+-...+++|+.|+..+.+++.- .+.++|++||....
T Consensus 183 ~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~---~g~r~V~~SS~~VY 237 (442)
T PLN02206 183 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR---VGARFLLTSTSEVY 237 (442)
T ss_pred CCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHH---hCCEEEEECChHHh
Confidence 58999999987665444445567899999999999887653 23589999997643
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 313 | ||||
| 1wma_A | 276 | Crystal Structure Of Human Cbr1 In Complex With Hyd | 1e-25 | ||
| 2pfg_A | 276 | Crystal Structure Of Human Cbr1 In Complex With Big | 3e-24 | ||
| 2hrb_A | 274 | Crystal Structure Of Human Carbonyl Reductase 3, Co | 2e-23 | ||
| 1n5d_A | 288 | Crystal Structure Of Porcine Testicular Carbonyl Re | 4e-23 | ||
| 3o26_A | 311 | The Structure Of Salutaridine Reductase From Papave | 9e-08 | ||
| 3o26_A | 311 | The Structure Of Salutaridine Reductase From Papave | 2e-07 | ||
| 3grp_A | 266 | 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl- | 9e-05 | ||
| 3asu_A | 248 | Crystal Structure Of Serine Dehydrogenase From Esch | 4e-04 |
| >pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276 | Back alignment and structure |
|
| >pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276 | Back alignment and structure |
|
| >pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274 | Back alignment and structure |
|
| >pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288 | Back alignment and structure |
|
| >pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311 | Back alignment and structure |
|
| >pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311 | Back alignment and structure |
|
| >pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266 | Back alignment and structure |
|
| >pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 313 | |||
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 1e-44 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 2e-37 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 1e-36 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 8e-17 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 5e-14 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 3e-14 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 4e-11 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 1e-13 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 9e-05 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 9e-13 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 1e-12 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 7e-05 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 2e-12 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 2e-05 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 1e-11 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 1e-06 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 1e-11 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 6e-04 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 2e-11 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 2e-05 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 3e-11 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 1e-10 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 2e-04 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 1e-10 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 3e-08 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 2e-10 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 2e-10 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 7e-04 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 3e-10 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 4e-10 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 4e-10 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 5e-10 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 7e-10 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 8e-10 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 8e-10 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 5e-04 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 9e-10 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 5e-05 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 9e-10 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 9e-10 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 1e-09 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 3e-04 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 1e-09 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 1e-09 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 1e-09 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 2e-09 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 3e-09 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 4e-09 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 7e-09 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 7e-09 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 1e-04 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 1e-08 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 2e-08 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 2e-08 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 2e-08 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 2e-08 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 2e-08 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 2e-08 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 2e-08 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 3e-08 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 3e-08 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 3e-08 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 3e-08 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 3e-08 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 3e-08 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 6e-08 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 6e-08 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 7e-08 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 7e-08 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 9e-08 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 1e-07 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 1e-07 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 7e-04 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 1e-07 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 1e-07 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 1e-07 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 1e-07 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 1e-07 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 1e-07 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 1e-07 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 1e-07 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 1e-07 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 2e-07 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 2e-07 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 2e-07 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 2e-07 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 7e-05 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 2e-07 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 2e-07 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 2e-04 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 2e-07 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 2e-07 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 2e-07 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 3e-07 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 3e-07 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 3e-07 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 3e-07 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 3e-07 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 3e-07 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 3e-07 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 3e-07 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 3e-07 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 4e-07 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 4e-07 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 4e-07 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 4e-07 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 4e-07 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 4e-07 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 4e-07 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 5e-07 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 5e-07 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 5e-07 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 5e-07 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 5e-07 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 5e-07 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 5e-07 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 6e-07 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 6e-07 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 6e-07 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 6e-07 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 6e-07 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 6e-07 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 6e-07 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 6e-07 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 7e-07 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 7e-07 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 7e-07 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 8e-07 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 9e-07 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 9e-07 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 9e-07 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 9e-07 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 9e-07 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 9e-07 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 1e-06 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 1e-06 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 1e-06 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 1e-06 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 1e-06 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 1e-06 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 1e-06 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 1e-06 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 1e-06 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 1e-06 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 2e-06 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 2e-06 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 2e-06 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 2e-06 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 2e-06 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 2e-06 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 2e-06 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 2e-06 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 2e-06 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 2e-06 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 2e-06 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 2e-06 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 2e-06 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 3e-06 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 3e-06 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 3e-06 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 3e-06 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 3e-06 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 3e-06 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 4e-06 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 4e-06 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 4e-06 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 5e-06 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 5e-06 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 5e-06 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 5e-06 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 6e-06 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 6e-06 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 6e-06 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 6e-06 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 6e-06 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 8e-06 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 8e-06 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 1e-05 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 1e-05 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 1e-05 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 2e-05 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 2e-05 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 2e-05 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 2e-05 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 2e-05 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 2e-05 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 2e-05 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 2e-05 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 4e-05 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 2e-05 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 2e-05 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 3e-05 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 3e-05 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 4e-05 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 4e-05 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 5e-05 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 6e-05 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 7e-05 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 9e-05 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 1e-04 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 2e-04 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 2e-04 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 3e-04 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 3e-04 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 4e-04 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 5e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-04 |
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 1e-44
Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 1/146 (0%)
Query: 148 SFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVP-SQELRQTLFNE 206
F +AE T+ TNFF VC L PL++P RVVNV+S + + S EL+Q +E
Sbjct: 101 PFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE 160
Query: 207 SLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDI 266
++TE++L+ +M +V+ K+G ++ GWP +Y V+K+GV LS I LS+ ++ I
Sbjct: 161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKI 220
Query: 267 IVNPVHPGYVNTDLTEHKGVLTPEQG 292
++N PG+V TD+ K +PE+G
Sbjct: 221 LLNACCPGWVRTDMAGPKATKSPEEG 246
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 2e-37
Identities = 54/127 (42%), Positives = 80/127 (62%), Gaps = 2/127 (1%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI-YRDTAPGSFGQRAETT 63
+ + RFHQLDI D SI L D ++ ++GGLD+LVNNAGI ++ P F +AE T
Sbjct: 50 QAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVT 109
Query: 64 LATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVP-SQELRQTLFNESLTEDQLLD 122
+ TNFF VC L PL++P RVVNV+S + + S EL+Q +E++TE++L+
Sbjct: 110 MKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVG 169
Query: 123 MMTDYVQ 129
+M +V+
Sbjct: 170 LMNKFVE 176
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 1e-36
Identities = 61/298 (20%), Positives = 115/298 (38%), Gaps = 74/298 (24%)
Query: 1 QKVCKNNNNNVRFHQLDILDQ-SSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQR 59
+K+ +N+ NV FHQLD+ D +++
Sbjct: 54 EKLKNSNHENVVFHQLDVTDPIATM---------------------------------SS 80
Query: 60 AETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQ 119
+ T+F L IL N A G+ + + + ++ + +
Sbjct: 81 LADFIKTHFGKL----DILV----------NNA---GVAGFSVDADRFKAMISDIGEDSE 123
Query: 120 LLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLR--P 177
L + + + + + + A E L N+ + +V +L PLL+
Sbjct: 124 ELVKIYEKPEAQELMSETYELA------------EECLKINYNGVKSVTEVLIPLLQLSD 171
Query: 178 HARVVNVASKLGMLYNVPSQELRQTLFN-ESLTEDQLLDMMTDYVQLAKEGKDKEAGWPE 236
R+VNV+S G L V ++ + L + ++LTE+++ ++ ++ KE + GWP
Sbjct: 172 SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPS 231
Query: 237 F--SYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
F +Y+ SK + + + + P VN V PG V T++ G T E+G
Sbjct: 232 FGAAYTTSKACLNAYTRVLA------NKIPKFQVNCVCPGLVKTEMNYGIGNYTAEEG 283
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 8e-17
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 17/106 (16%)
Query: 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHG--GLDLLVNNAGIYRDTAPGSFGQRAE--TT 63
++ V L + S+ + G GL LL+NNAG+ + RA
Sbjct: 50 DSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQ 109
Query: 64 LATNFFALVTVCHILFPLLR-------------PHARVVNVASKLG 96
L N ++V + L PLL+ A V+ ++S LG
Sbjct: 110 LDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG 155
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 5e-14
Identities = 34/171 (19%), Positives = 59/171 (34%), Gaps = 54/171 (31%)
Query: 154 ETTLATNFFALVTVCHILFPLLR-------------PHARVVNVASKLGMLYNVPSQELR 200
L N ++V + L PLL+ A V+ ++S LG
Sbjct: 107 AEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG----------- 155
Query: 201 QTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKD 260
S+T+ A +P +Y +SK + TL+ D
Sbjct: 156 ------SITD----------------NTSGSAQFPVLAYRMSKAAINMFG----RTLAVD 189
Query: 261 KRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQG--KIRQKIYLLKRTN--KF 307
+ +++V PG+V T+L LT EQ ++ L ++ +F
Sbjct: 190 LKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHNGRF 240
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 3e-14
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 17/109 (15%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHG--GLDLLVNNAGIYRDTAPGSFGQRAE- 61
N++N+ ++D+ + + KL DI+ GL++L NNAGI +A + + E
Sbjct: 68 AKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQEL 127
Query: 62 -TTLATNFFALVTVCHILFPLLR-------------PHARVVNVASKLG 96
TL TN + + PLL+ A ++N++S LG
Sbjct: 128 LDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 176
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 4e-11
Identities = 28/152 (18%), Positives = 45/152 (29%), Gaps = 54/152 (35%)
Query: 154 ETTLATNFFALVTVCHILFPLLR-------------PHARVVNVASKLGMLYNVPSQELR 200
TL TN + + PLL+ A ++N++S LG
Sbjct: 128 LDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG----------- 176
Query: 201 QTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKD 260
S+ + G +Y SK + + +LS D
Sbjct: 177 ------SIQGNTD------------------GGMY--AYRTSKSALNAAT----KSLSVD 206
Query: 261 KRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
I+ +HPG+V TD+ L
Sbjct: 207 LYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTS 238
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 1e-13
Identities = 24/102 (23%), Positives = 37/102 (36%), Gaps = 11/102 (10%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR-----DTAPGSFGQ 58
CK V +D ++ I+ ++ + G + +LVNNAG+ T
Sbjct: 75 CKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQI-- 132
Query: 59 RAETTLATNFFALVTVCHILFPLL--RPHARVVNVASKLGML 98
E T N A P + H +V VAS G +
Sbjct: 133 --EKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV 172
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 9e-05
Identities = 27/148 (18%), Positives = 40/148 (27%), Gaps = 54/148 (36%)
Query: 154 ETTLATNFFALVTVCHILFPLL--RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTED 211
E T N A P + H +V VAS G + VP
Sbjct: 133 EKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS-VPFLL------------- 178
Query: 212 QLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLS---KDKRRPDIIV 268
+Y SK + F H TL+ + +
Sbjct: 179 --------------------------AYCSSKFAA--VGF--HKTLTDELAALQITGVKT 208
Query: 269 NPVHPGYVNTDLTEHK-----GVLTPEQ 291
+ P +VNT ++ L PE+
Sbjct: 209 TCLCPNFVNTGFIKNPSTSLGPTLEPEE 236
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 9e-13
Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 15/107 (14%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTL 64
++N+ ++R +LD+ Q S+ + D I + G +D+L++NAG FG T
Sbjct: 55 RDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGH------MVFGPAEAFTP 108
Query: 65 A-------TNFFALVTVCHILFPLLRP--HARVVNVASKLGMLYNVP 102
N + V P +R H ++ ++S P
Sbjct: 109 EQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPP 155
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 1e-12
Identities = 14/98 (14%), Positives = 29/98 (29%), Gaps = 12/98 (12%)
Query: 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETT--- 63
N N + + I + + I ++ +D V AG + ++
Sbjct: 57 NPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNA-----SSDEFLKS 111
Query: 64 ----LATNFFALVTVCHILFPLLRPHARVVNVASKLGM 97
+ N ++ HI LL V + +
Sbjct: 112 VKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAAL 149
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 7e-05
Identities = 15/179 (8%), Positives = 37/179 (20%), Gaps = 63/179 (35%)
Query: 117 EDQLLDMMTDYVQYNGPLDKIL----------DTAMDTAPGSFGQRAETTLATNFFALVT 166
E+++ ++ + +D + + D S + + N ++
Sbjct: 71 EEEIKSVIEKINSKSIKVD-TFVCAAGGWSGGNASSDEFLKSV----KGMIDMNLYSAFA 125
Query: 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKE 226
HI LL V + +
Sbjct: 126 SAHIGAKLLNQGGLFVLTGASAAL------------------------------------ 149
Query: 227 GKDKEAGWPEFS-YSVSKLGVAKLSFIQHATLSKD--KRRPDIIVNPVHPGYVNTDLTE 282
Y +K + L+ + + P ++T
Sbjct: 150 -----NRTSGMIAYGATKAATHHII----KDLASENGGLPAGSTSLGILPVTLDTPTNR 199
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 2e-12
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
Query: 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI----YRDTAPGSFGQRAETT 63
V +LD+ D SS+ + D + G D+L+NNAGI Y T G F E+
Sbjct: 61 AGQVEVRELDLQDLSSVRRFADGVS----GADVLINNAGIMAVPYALTVDG-F----ESQ 111
Query: 64 LATNF---FALVTVCHILFPLLRPHARVVNVAS 93
+ TN FAL ++L P L RVV V+S
Sbjct: 112 IGTNHLGHFALT---NLLLPRLT--DRVVTVSS 139
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 2e-05
Identities = 33/162 (20%), Positives = 47/162 (29%), Gaps = 62/162 (38%)
Query: 154 ETTLATNF---FALVTVCHILFPLLRPHARVVNVAS---KLGMLYNVPSQELRQTLFNES 207
E+ + TN FAL ++L P L RVV V+S G
Sbjct: 109 ESQIGTNHLGHFALT---NLLLPRLT--DRVVTVSSMAHWPG------------------ 145
Query: 208 LTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSK--DKRRPD 265
+ + + P +YS SKL A L F L +
Sbjct: 146 -------RINLEDLNWRSRRYS-----PWLAYSQSKL--ANLLFTSE--LQRRLTAAGSP 189
Query: 266 IIVNPVHPGYVNTDLTEHKG---------------VLTPEQG 292
+ HPGY +T+L G + G
Sbjct: 190 LRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFG 231
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 1e-11
Identities = 16/95 (16%), Positives = 27/95 (28%), Gaps = 14/95 (14%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLA---- 65
V D+ + G +L+++ AG G FG T
Sbjct: 50 AVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGT------GEFGPVGVYTAEQIRR 103
Query: 66 ---TNFFALVTVCHILFPLLRPHA-RVVNVASKLG 96
+N + + V L+ + NV S
Sbjct: 104 VMESNLVSTILVAQQTVRLIGERGGVLANVLSSAA 138
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 1e-06
Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 53/145 (36%)
Query: 154 ETTLATNFFALVTVCHILFPLLRPHA-RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQ 212
+ +N + + V L+ + NV S +
Sbjct: 102 RRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQV--------------------- 140
Query: 213 LLDMMTDYVQLAKEGKDKEAGWPEFS-YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPV 271
G S Y SK G+ +L + + + + +
Sbjct: 141 --------------------GKANESLYCASKWGMRGFL----ESLRAELKDSPLRLVNL 176
Query: 272 HPGYVNTDLTEH------KGVLTPE 290
+P + ++ ++ G +TPE
Sbjct: 177 YPSGIRSEFWDNTDHVDPSGFMTPE 201
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 1e-11
Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 7/88 (7%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE----TTLA 65
V + DI D + I L G +DLL NAG+ F Q +E A
Sbjct: 55 RVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSEL---EPFDQVSEASYDRQFA 111
Query: 66 TNFFALVTVCHILFPLLRPHARVVNVAS 93
N L PL+R +V +S
Sbjct: 112 VNTKGAFFTVQRLTPLIREGGSIVFTSS 139
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 39.4 bits (93), Expect = 6e-04
Identities = 25/146 (17%), Positives = 41/146 (28%), Gaps = 46/146 (31%)
Query: 154 ETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQL 213
+ A N L PL+R +V +S
Sbjct: 107 DRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEG---------------------- 144
Query: 214 LDMMTDYVQLAKEGKDKEAGWPEFS-YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVH 272
G P S YS SK + + + L+ + I VN V
Sbjct: 145 -------------------GHPGMSVYSASKAALVSFA----SVLAAELLPRGIRVNSVS 181
Query: 273 PGYVNTDLTEHKGVLTPEQGKIRQKI 298
PG+++T G+ E+ + +
Sbjct: 182 PGFIDTPTKGVAGITEAERAEFKTLG 207
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 2e-11
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA 60
+K+ + + + DI + S + +L + HG +D LV NAG+ +
Sbjct: 42 KKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVN 101
Query: 61 E--TTLATNFFALVTVCHILFPLLR-PHARVVNVASKLGMLYN 100
NFF++V++ I P L+ + VV V+S +Y
Sbjct: 102 AWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYF 144
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 2e-05
Identities = 28/157 (17%), Positives = 53/157 (33%), Gaps = 53/157 (33%)
Query: 154 ETTLATNFFALVTVCHILFPLLR-PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQ 212
+ NFF++V++ I P L+ + VV V+S +Y
Sbjct: 104 KKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYF------------------- 144
Query: 213 LLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVH 272
+ W +Y SK + + TL+ ++R + V
Sbjct: 145 -------------------SSWG--AYGSSKAALNHFA----MTLANEER--QVKAIAVA 177
Query: 273 PGYVNTDLTE------HKGVLTPEQGKIRQKIYLLKR 303
PG V+TD+ ++ EQ K+ + + +
Sbjct: 178 PGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQ 214
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 3e-11
Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTV 74
D ++ I D ++TQ L +V+NA + PG + + A +
Sbjct: 77 YGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLI 136
Query: 75 CHILFPLLRPHA--RVVNVAS 93
PLL +V+++
Sbjct: 137 NLHCEPLLTASEVADIVHISD 157
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 1e-10
Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 23/109 (21%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETT------ 63
+ D+ + +L D+ GG+D++ +NAGI G A+
Sbjct: 81 DAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGI------VVAGPLAQMNHDDWRW 134
Query: 64 -LATNFFALVTVCHILFPLLRPH---ARVVNVASKLGML-------YNV 101
+ + + + P L + AS G++ Y V
Sbjct: 135 VIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGV 183
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 20/147 (13%), Positives = 37/147 (25%), Gaps = 47/147 (31%)
Query: 154 ETTLATNFFALVTVCHILFPLLRPH---ARVVNVASKLGMLYNVPSQELRQTLFNESLTE 210
+ + + + P L + AS G L
Sbjct: 133 RWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAG-LVPNAGL------------- 178
Query: 211 DQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNP 270
+Y V+K GV L+ TL+++ + I V+
Sbjct: 179 --------------------------GTYGVAKYGVVGLA----ETLAREVKPNGIGVSV 208
Query: 271 VHPGYVNTDLTEHKGVLTPEQGKIRQK 297
+ P V T L + + +
Sbjct: 209 LCPMVVETKLVSNSERIRGADYGMSAT 235
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 1e-10
Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 8/73 (10%)
Query: 29 DDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP--HA 86
D + G+D LV AG+ T ++ N+F + P L+
Sbjct: 54 DVLAKCSKGMDGLVLCAGLGPQTKV------LGNVVSVNYFGATELMDAFLPALKKGHQP 107
Query: 87 RVVNVASKLGMLY 99
V ++S
Sbjct: 108 AAVVISSVASAHL 120
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 3e-08
Identities = 19/159 (11%), Positives = 41/159 (25%), Gaps = 18/159 (11%)
Query: 147 GSFGQRAETTLATNFFALVTVCHILFPLLRP--HARVVNVASKLGMLYNVPSQELRQTLF 204
G + ++ N+F + P L+ V ++S L L
Sbjct: 73 GPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALE 132
Query: 205 NESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRP 264
+ + + +Y+ SK + +
Sbjct: 133 A------------GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVR----KRAAAWGEA 176
Query: 265 DIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKR 303
+ +N + PG T L + I + + + R
Sbjct: 177 GVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGR 215
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 2e-10
Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 17/101 (16%)
Query: 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLA- 65
++ QLD+ D S+ + + G +D+LV NAG+ G G
Sbjct: 55 PPGSLETLQLDVRDSKSVAAARERVT--EGRVDVLVCNAGL------GLLGPLEALGEDA 106
Query: 66 ------TNFFALVTVCHILFPLLRP--HARVVNVASKLGML 98
N V + P ++ RV+ S G++
Sbjct: 107 VASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM 147
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 2e-10
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 7/91 (7%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE----TTLA 65
Q D + + + +L++ ++ + G +D+L NAG G+ E T
Sbjct: 76 GAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGS---MLPLGEVTEEQYDDTFD 132
Query: 66 TNFFALVTVCHILFPLLRPHARVVNVASKLG 96
N ++ PLL + VV S G
Sbjct: 133 RNVKGVLFTVQKALPLLARGSSVVLTGSTAG 163
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273 | Back alignment and structure |
|---|
Score = 39.5 bits (93), Expect = 7e-04
Identities = 26/141 (18%), Positives = 37/141 (26%), Gaps = 46/141 (32%)
Query: 154 ETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQL 213
+ T N ++ PLL + VV S G
Sbjct: 128 DDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGST---------------------- 165
Query: 214 LDMMTDYVQLAKEGKDKEAGWPEFS-YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVH 272
G P FS Y+ SK + SF + D + I +N +
Sbjct: 166 -------------------GTPAFSVYAASKAAL--RSFAR--NWILDLKDRGIRINTLS 202
Query: 273 PGYVNTDLTEHKGVLTPEQGK 293
PG T P Q +
Sbjct: 203 PGPTETTGLVELAGKDPVQQQ 223
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 3e-10
Identities = 16/105 (15%), Positives = 35/105 (33%), Gaps = 12/105 (11%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHG----GLDLLVNNAGIYRDTAPGSFG--- 57
+ + V D+ ++ + +L ++ LL+NNA D + G
Sbjct: 56 QQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVND 115
Query: 58 -QRAETTLATNFFALVTVCHILFPLLR----PHARVVNVASKLGM 97
A N +++ + + VVN++S +
Sbjct: 116 LAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL 160
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 4e-10
Identities = 24/119 (20%), Positives = 40/119 (33%), Gaps = 28/119 (23%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTL 64
+ + V QLD+ + D+++ + G + +L NNAG+ F E++
Sbjct: 55 EGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGV------NLFQPIEESSY 108
Query: 65 AT-------NFFALVTVCHILFPLLRPHAR--------VVNVASKLGML-------YNV 101
N +V P + + VVN AS L YN
Sbjct: 109 DDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNT 167
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 4e-10
Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 8/88 (9%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE----TTLATNFFA 70
L+ +L ++ + G LD L++NA I P Q + + N A
Sbjct: 72 NLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTP--LEQLPDEDFMQVMHVNVNA 129
Query: 71 LVTVCHILFPLLR--PHARVVNVASKLG 96
+ L PLL+ A + +S +G
Sbjct: 130 TFMLTRALLPLLKRSEDASIAFTSSSVG 157
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 5e-10
Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 13/97 (13%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETT-------LATN 67
Q DI S + L D + GGLD +++N+G+ E T N
Sbjct: 77 QADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDE------LEVTQELFDKVFNLN 130
Query: 68 FFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQ 104
V R R++ +S ++ +P+
Sbjct: 131 TRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNH 167
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 7e-10
Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFFALVT 73
+ DI I KL D G LD+ V+N+G+ + + + N
Sbjct: 74 KADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFF 133
Query: 74 VCHILFPLLRPHARVVNVASKLGMLYNVPSQ 104
V + L R+V +S ++VP
Sbjct: 134 VAREAYRHLTEGGRIVLTSSNTSKDFSVPKH 164
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 8e-10
Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 15/95 (15%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETT------- 63
+ D+LD + + + G +LVNNAG R +F AETT
Sbjct: 61 LFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRV---STF---AETTDEAWSEE 114
Query: 64 LATNFFALVTVCHILFPLL--RPHARVVNVASKLG 96
L FF+++ P L R A +V V S L
Sbjct: 115 LQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLA 149
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 8e-10
Identities = 11/87 (12%), Positives = 29/87 (33%), Gaps = 11/87 (12%)
Query: 14 HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQ----RAETTLATNFF 69
+DI + SI K+++ + G +D +V+ G + + T+++
Sbjct: 39 VTVDITNIDSIKKMYEQV----GKVDAIVSATGSAT---FSPLTELTPEKNAVTISSKLG 91
Query: 70 ALVTVCHILFPLLRPHARVVNVASKLG 96
+ + + L +
Sbjct: 92 GQINLVLLGIDSLNDKGSFTLTTGIMM 118
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 5e-04
Identities = 13/156 (8%), Positives = 37/156 (23%), Gaps = 51/156 (32%)
Query: 132 GPLDKILDTAMDTAPGSFGQ----RAETTLATNFFALVTVCHILFPLLRPHARVVNVASK 187
G +D I+ + + T+++ + + + L
Sbjct: 57 GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGI 116
Query: 188 LGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFS-YSVSKLGV 246
+ E + + +++ V
Sbjct: 117 MM-----------------------------------------EDPIVQGASAAMANGAV 135
Query: 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282
+F + + + + R I +N V P + +
Sbjct: 136 T--AFAK--SAAIEMPR-GIRINTVSPNVLEESWDK 166
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 9e-10
Identities = 19/87 (21%), Positives = 29/87 (33%), Gaps = 7/87 (8%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFF 69
R D+ D+ L + + G LDLLV+ G + G+ E LA +
Sbjct: 44 ARALPADLADELEAKALLE----EAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLL 99
Query: 70 ALVTVCHILFPLLRPHARVVNVASKLG 96
V + AR V +
Sbjct: 100 TAAFVLKHA--RFQKGARAVFFGAYPR 124
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 5e-05
Identities = 27/170 (15%), Positives = 43/170 (25%), Gaps = 57/170 (33%)
Query: 132 GPLDKILDTAMDTAPGSFGQ----RAETTLATNFFALVTVCHILFPLLRPHARVVNVASK 187
GPLD ++ S + E LA + V + AR V +
Sbjct: 65 GPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA--RFQKGARAVFFGAY 122
Query: 188 LGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFS-YSVSKLGV 246
+ P F+ Y+ +K +
Sbjct: 123 PRYV-----------------------------------------QVPGFAAYAAAKGAL 141
Query: 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH-----KGVLTPEQ 291
K+ R + + V V T L KG L+PE+
Sbjct: 142 EAYL----EAARKELLREGVHLVLVRLPAVATGLWAPLGGPPKGALSPEE 187
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 9e-10
Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 14/104 (13%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA 60
+ + + + D + + GGLD+L+ N +
Sbjct: 70 SHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHIT------NTSLNLF 123
Query: 61 ETTLA-------TNFFALVTVCHILFPLL-RPHARVVNVASKLG 96
+ NF + V + P+L + + +V V+S G
Sbjct: 124 HDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG 167
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 9e-10
Identities = 26/106 (24%), Positives = 39/106 (36%), Gaps = 14/106 (13%)
Query: 5 KNNNNNVRFHQLDI-LDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETT 63
N N+ FH D+ + + KL I Q +D+L+N AGI D + E T
Sbjct: 51 INPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDD-------HQIERT 103
Query: 64 LATNFFALVTVCHILFPLLRPH-----ARVVNVASKLGMLYNVPSQ 104
+A NF LV + + N+ S G +
Sbjct: 104 IAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG-FNAIHQV 148
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 1e-09
Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFFALVT 73
+ D D +I + + GGLD+LVN+AGI+ + +A NF A
Sbjct: 87 RADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFV 146
Query: 74 VCHILFPLLRPHARVVNVASKLGMLYNVPSQ 104
L R++ + S L L P
Sbjct: 147 AIRSASRHLGDGGRIITIGSNLAELVPWPGI 177
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 3e-04
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 232 AGWPEFS-YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPE 290
WP S YS SK +A L+ L++D I VN VHPG +TD+
Sbjct: 172 VPWPGISLYSASKAALAGLT----KGLARDLGPRGITVNIVHPGSTDTDMN---PADGDH 224
Query: 291 QGKIRQKI 298
R++I
Sbjct: 225 AEAQRERI 232
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 1e-09
Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLA---- 65
LD+ D I + D+ ++G +D+LVNNAG G ETT
Sbjct: 52 RAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGR------TQVGAFEETTERELRD 105
Query: 66 ---TNFFALVTVCHILFPLLRP--HARVVNVASKLG 96
+ F + L P +R VVN++S G
Sbjct: 106 LFELHVFGPARLTRALLPQMRERGSGSVVNISSFGG 141
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 1e-09
Identities = 15/97 (15%), Positives = 32/97 (32%), Gaps = 13/97 (13%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETT-------LATN 67
+ ++ I ++ ++ G LD++ +N+G+ + T N
Sbjct: 85 KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHV------KDVTPEEFDRVFTIN 138
Query: 68 FFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQ 104
V + L R++ + S G VP
Sbjct: 139 TRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKH 175
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 1e-09
Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 10/102 (9%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNF 68
V +D+ + + + +++ GG D+LVNNAG + +
Sbjct: 58 RVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLV 117
Query: 69 FALVTVCHILFPLLRP--HARVVNVASKLG-------MLYNV 101
A V + L P +R +++ AS +YNV
Sbjct: 118 MAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNV 159
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 2e-09
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-----TAPGSFGQRAETTLATNFF 69
Q D+ D +++ +L + GG+D+LVNNAGI T F + +A N
Sbjct: 83 QADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVF----DRVIAVNLK 138
Query: 70 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQ 104
LR R++N+++ L + PS
Sbjct: 139 GTFNTLREAAQRLRVGGRIINMSTSQVGLLH-PSY 172
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248 | Back alignment and structure |
|---|
Score = 55.6 bits (135), Expect = 3e-09
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE--TTLATN 67
N+ QLD+ ++++I ++ + + +D+LVNNAG+ P + T + TN
Sbjct: 47 NLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTN 106
Query: 68 FFALVTVCHILFPLL--RPHARVVNVAS 93
LV + + P + R H ++N+ S
Sbjct: 107 NKGLVYMTRAVLPGMVERNHGHIINIGS 134
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252 | Back alignment and structure |
|---|
Score = 55.2 bits (134), Expect = 4e-09
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 8/88 (9%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE----TTLATNFFA 70
L + +L I + LD +++NAG+ D P ++ + N A
Sbjct: 70 DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCP--MSEQNPQVWQDVMQVNVNA 127
Query: 71 LVTVCHILFPLLR--PHARVVNVASKLG 96
+ L PLL +V +S +G
Sbjct: 128 TFMLTQALLPLLLKSDAGSLVFTSSSVG 155
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 7e-09
Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 15/101 (14%)
Query: 4 CKNNNNNVRFH--QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA- 60
CK+ + D+ ++ I + I++QH G+D+ +NNAG+ A
Sbjct: 76 CKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL----ARPDTLLSGS 131
Query: 61 ----ETTLATNFFALVTVCHILFPLLR----PHARVVNVAS 93
+ N AL + ++ ++N+ S
Sbjct: 132 TSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININS 172
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 7e-09
Identities = 9/66 (13%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Query: 34 QHGGLDLLVNNAGIYR--DTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNV 91
Q +D + AG + + F + A+ + + ++ + L+P +
Sbjct: 69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLT 128
Query: 92 ASKLGM 97
+ M
Sbjct: 129 GAAAAM 134
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 1e-04
Identities = 13/129 (10%), Positives = 29/129 (22%), Gaps = 44/129 (34%)
Query: 154 ETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQL 213
+ + + ++ + L+P + + M
Sbjct: 98 DLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM----------------------- 134
Query: 214 LDMMTDYVQLAKEGKDKEAGWPEFS-YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVH 272
P Y ++K V L+ A S V +
Sbjct: 135 ------------------GPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDN--SAVLTIM 174
Query: 273 PGYVNTDLT 281
P ++T +
Sbjct: 175 PVTLDTPMN 183
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 1e-08
Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 19/99 (19%)
Query: 15 QLDILDQSSIHKLHDDI------QTQHGGLDLLVNNAGIYRDTAPGSFGQRAETT----- 63
++ + L+ + +T D+L+NNAGI ETT
Sbjct: 63 GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFI------EETTEQFFD 116
Query: 64 --LATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYN 100
++ N A + LR ++R++N++S +
Sbjct: 117 RMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL 155
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 2e-08
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFFALVT 73
D+ ++ +L + LD+LVNNAG A S+ E + N ++ +
Sbjct: 83 PADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFS 142
Query: 74 VCHILFPLLRPHA------RVVNVASKLGM 97
L PLLR A RV+N+ S G+
Sbjct: 143 CIQQLLPLLRRSASAENPARVINIGSVAGI 172
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 2e-08
Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE--T 62
+ N V QLDI I +++ + +D+LVNNAG + +
Sbjct: 83 EFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQD 142
Query: 63 TLATNFFALVTVCHILFPLL--RPHARVVNVAS 93
TN AL+ + + P+ + +VN+ S
Sbjct: 143 VFDTNVTALINITQAVLPIFQAKNSGDIVNLGS 175
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244 | Back alignment and structure |
|---|
Score = 52.9 bits (128), Expect = 2e-08
Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 9/92 (9%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE----TTLA 65
N++F + D+ Q I + D ++ D + NAGI GS L
Sbjct: 45 NLKFIKADLTKQQDITNVLD--IIKNVSFDGIFLNAGILIK---GSIFDIDIESIKKVLD 99
Query: 66 TNFFALVTVCHILFPLLRPHARVVNVASKLGM 97
N ++ + L L+ A +V S
Sbjct: 100 LNVWSSIYFIKGLENNLKVGASIVFNGSDQCF 131
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245 | Back alignment and structure |
|---|
Score = 52.9 bits (128), Expect = 2e-08
Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 11/90 (12%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-----ETTL 64
V + DI+ + D ++ +D LV+ A + A + + L
Sbjct: 49 GVEPIESDIVKEVLEEGGVDKLK-NLDHVDTLVHAAAV----ARDTTIEAGSVAEWHAHL 103
Query: 65 ATNFFALVTVCHILFPLLRP-HARVVNVAS 93
N + L P LR V+ + S
Sbjct: 104 DLNVIVPAELSRQLLPALRAASGCVIYINS 133
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 2e-08
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 6/103 (5%)
Query: 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-----ET 62
NV D+ + ++ + G LD+LVNNAG + G +
Sbjct: 57 EQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDA 116
Query: 63 TLATNFFALVTVCHILFPLLRPHA-RVVNVASKLGMLYNVPSQ 104
TL N +++ + P L +VN++S L+ P
Sbjct: 117 TLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDF 159
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 2e-08
Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 4/100 (4%)
Query: 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE---TTLA 65
+ D+ + S + + + G +D+LVNNAG + Q E T
Sbjct: 78 EKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFK 137
Query: 66 TNFFALVTVCHILFP-LLRPHARVVNVASKLGMLYNVPSQ 104
NF A++ + L++ +VNV+S +
Sbjct: 138 LNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGY 177
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234 | Back alignment and structure |
|---|
Score = 52.5 bits (127), Expect = 2e-08
Identities = 19/91 (20%), Positives = 27/91 (29%), Gaps = 11/91 (12%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-----ETTL 64
D+ ++ + ++ G L LVNNAG+ L
Sbjct: 51 GALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGV----GVMKPVHELTLEEWRLVL 106
Query: 65 ATNFFALVTVCHILFPLL--RPHARVVNVAS 93
TN P L R +VNV S
Sbjct: 107 DTNLTGAFLGIRHAVPALLRRGGGTIVNVGS 137
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266 | Back alignment and structure |
|---|
Score = 52.9 bits (128), Expect = 3e-08
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+++ + +V ++ D+ SI +L + + + G+D+LVNNAGI RD
Sbjct: 65 KEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDG 115
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262 | Back alignment and structure |
|---|
Score = 52.9 bits (128), Expect = 3e-08
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-----TAPGSFGQRAETTLATNFF 69
Q D+ ++ + KL D + + G +D+ +N G T+ F + N
Sbjct: 69 QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEF----DAMDTINNK 124
Query: 70 ALVTVCHILFPLLRPHARVVNVASKLGMLYN 100
+ P+ ++ +A+ L Y
Sbjct: 125 VAYFFIKQAAKHMNPNGHIITIATSLLAAYT 155
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 3e-08
Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFF 69
LDI D + DI ++G +D+LVN A ++ D + + N
Sbjct: 60 EPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVI 119
Query: 70 ALVTVCHILFPLL--RPHARVVNVAS 93
A + + ++ + + + NVAS
Sbjct: 120 AQYGILKTVTEIMKVQKNGYIFNVAS 145
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247 | Back alignment and structure |
|---|
Score = 52.5 bits (127), Expect = 3e-08
Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 10/95 (10%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA---- 60
V +LD+ D+ + GGLD+LVNNAGI + A
Sbjct: 52 TAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGI----MLLGPVEDADTTD 107
Query: 61 -ETTLATNFFALVTVCHILFP-LLRPHARVVNVAS 93
+ TN L+ + P LLR VV ++S
Sbjct: 108 WTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSS 142
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 3e-08
Identities = 15/97 (15%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE---TTLATN 67
+ ++ +I D S+ + + G +D+ V NAG+ P + ++ +
Sbjct: 85 SKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVD 144
Query: 68 FFALVTVCHILFPLLRP--HARVVNVASKLGMLYNVP 102
+ H + + + ++ +S G + N+P
Sbjct: 145 LNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIP 181
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 6e-08
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE--TTLATN 67
V LD+ D++++ D++ + L L+NNAG+ T P + T + TN
Sbjct: 70 RVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTN 129
Query: 68 FFALVTVCHILFPLLRPHAR---VVNVAS 93
L+ +L P L H +VN+ S
Sbjct: 130 IKGLLYSTRLLLPRLIAHGAGASIVNLGS 158
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 6e-08
Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVT 73
+D+ D+ I + + GG+D+LVNNA T +R + + N
Sbjct: 107 IVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYL 166
Query: 74 VCHILFPLLR--PHARVVNVASKLGMLYNVP 102
P L+ A ++N++ L +
Sbjct: 167 ASKACIPYLKKSKVAHILNISPPLNLNPVWF 197
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 7e-08
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+ + + V Q D+ D++ L + GG+D++ NAG++ D
Sbjct: 52 ADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDA 102
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 7e-08
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-----ETTL 64
V D+ + ++ + Q G +D+LVNNAG A G+ G TL
Sbjct: 59 QVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTL 118
Query: 65 ATNFFALVTVCHILFP-LLRPHARVVNVAS 93
N A++ + + P L+ +VNV+S
Sbjct: 119 KLNLQAVIEMTKKVKPHLVASKGEIVNVSS 148
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 9e-08
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
K R L+I D SI +I+ ++ +D+LVNNAGI RD
Sbjct: 50 KEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDN 96
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 1e-07
Identities = 14/100 (14%), Positives = 33/100 (33%), Gaps = 11/100 (11%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA 60
++ + V +H LD+ S+ + + + G +D++V NAG+ +
Sbjct: 44 HELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGL----GYFKRLEEL 99
Query: 61 -----ETTLATNFFALVTVCHILFPLLRPHAR--VVNVAS 93
+ N + L+ +V +
Sbjct: 100 SEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSD 139
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 1e-07
Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 10/96 (10%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE----TTLA 65
VR D+ D + L ++ + LDLLVNNAG P + +A
Sbjct: 84 IVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVP--LEEVTFEQWNGIVA 141
Query: 66 TNFFALVTVCHILFPLLRPHA----RVVNVASKLGM 97
N F +++ R++N S
Sbjct: 142 ANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQ 177
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 39.5 bits (93), Expect = 7e-04
Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 7/60 (11%)
Query: 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKI 298
Y+ +K + L+ + + D R DI + G TD+T ++ + ++
Sbjct: 186 YTATKHAITGLT----KSTALDGRMHDIACGQIDIGNAATDMTAR---MSTGVLQANGEV 238
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 1e-07
Identities = 16/91 (17%), Positives = 32/91 (35%), Gaps = 11/91 (12%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-----ETTL 64
N Q+D+ D+ + + +G D +VNNAG+ +
Sbjct: 60 NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGM----MLLGQIDTQEANEWQRMF 115
Query: 65 ATNFFALVTVCHILFPLL--RPHARVVNVAS 93
N L+ + + R ++N++S
Sbjct: 116 DVNVLGLLNGMQAVLAPMKARNCGTIINISS 146
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 1e-07
Identities = 17/96 (17%), Positives = 30/96 (31%), Gaps = 11/96 (11%)
Query: 15 QLDILDQSSIHKLHDDIQT-QHGGLDLLVNNAGIYRDTAPGSFGQRA--------ETTLA 65
D +S + L + + Q G LD+LVNNA T + + +
Sbjct: 60 VCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINN 119
Query: 66 TNFFALVTVCHILFPLL--RPHARVVNVASKLGMLY 99
L+ +V ++S + Y
Sbjct: 120 VGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY 155
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 1e-07
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP 53
+ QL + + +L + + + +G +D+LV+N + P
Sbjct: 46 ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQP 88
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 1e-07
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
Q + +N + L++ + SI + I + GG+D+LVNNAGI RD
Sbjct: 47 QAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDN 97
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250 | Back alignment and structure |
|---|
Score = 50.9 bits (123), Expect = 1e-07
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 14/98 (14%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE----TTLA 65
V + D+ D+ ++ Q G +D+LVNNAGI ++ G +A
Sbjct: 53 KVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMA 112
Query: 66 TN----FFALVTVCHILFPLLRPHA--RVVNVASKLGM 97
N F C + P + +VN+AS +
Sbjct: 113 VNVRGIFL----GCRAVLPHMLLQGAGVIVNIASVASL 146
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 1e-07
Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 11/97 (11%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA--- 60
++ LD+ D+ S+ G +D+LVNNAG+ P S
Sbjct: 48 IRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGV----MPLSPLAAVKVD 103
Query: 61 --ETTLATNFFALVTVCHILFPLL--RPHARVVNVAS 93
E + N ++ + P++ + +++N+ S
Sbjct: 104 EWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGS 140
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 1e-07
Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 3/93 (3%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVT 73
DI D ++ Q GG+D+ VNNA + +R +
Sbjct: 71 VGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYA 130
Query: 74 VCHILFPLLR--PHARVVNVASKLGMLYNVPSQ 104
V P ++ + ++ ++ + +
Sbjct: 131 VSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRP 163
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 1e-07
Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE--TTLATNF 68
V +D+ + S+ + Q G +D+LV AGI + + N
Sbjct: 64 VSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINL 123
Query: 69 FALVTVCHILFPLLRP--HARVVNVASKLGMLYNVP 102
+ C + ++ +V + S G++ N P
Sbjct: 124 NGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRP 159
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 1e-07
Identities = 15/90 (16%), Positives = 26/90 (28%), Gaps = 6/90 (6%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE----TTLATNFFALV 72
L + +L D +D +V+N I R +E +
Sbjct: 52 IALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPI 111
Query: 73 TVCHILFPLLRP--HARVVNVASKLGMLYN 100
+ LR A V+ + S +G
Sbjct: 112 LLLQSAIAPLRAAGGASVIFITSSVGKKPL 141
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 2e-07
Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 11/93 (11%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA-----PGSFGQRAETTLATNFF 69
+ ++ + I ++ I G LD+ VNNA + + T+ N
Sbjct: 60 KANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHW----DWTMNINAK 115
Query: 70 ALVTVCHILFPLLRPHA--RVVNVASKLGMLYN 100
AL+ L+ + +V+++S + Y
Sbjct: 116 ALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYL 148
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 2e-07
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 15/94 (15%)
Query: 13 FHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETT-------LA 65
D+ + + L + G LD++VNNAG+ G ETT L
Sbjct: 70 HLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISR---GRI---TETTDADWSLSLG 123
Query: 66 TNFFALVTVCHILFPLLRP--HARVVNVASKLGM 97
N A +C PL+ +VNVAS G+
Sbjct: 124 VNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGL 157
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 2e-07
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 18/103 (17%)
Query: 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLA 65
+ ++F Q D D+ KL D + G + LVNNAGI + + ETT A
Sbjct: 51 GTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSV------EETTTA 104
Query: 66 TNFFALVTV--------CHILFPLLRPH---ARVVNVASKLGM 97
+ L+ V + ++ A ++N++S G
Sbjct: 105 -EWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF 146
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 2e-07
Identities = 7/66 (10%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Query: 34 QHGGLDLLVNNAGIYRDTAP--GSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNV 91
+D ++ AG + S + + + + H+ L+ +
Sbjct: 73 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLA 132
Query: 92 ASKLGM 97
+K +
Sbjct: 133 GAKAAL 138
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 7e-05
Identities = 13/132 (9%), Positives = 29/132 (21%), Gaps = 48/132 (36%)
Query: 154 ETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQL 213
+ + + H+ L+ + +K +
Sbjct: 102 DLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAAL----------------------- 138
Query: 214 LDMMTDYVQLAKEGKDKEAGWPEFS-YSVSKLGVAKLSFIQHATLSKD--KRRPDIIVNP 270
G P Y ++K V +L +L+
Sbjct: 139 ------------------DGTPGMIGYGMAKGAVHQLC----QSLAGKNSGMPSGAAAIA 176
Query: 271 VHPGYVNTDLTE 282
V P ++T +
Sbjct: 177 VLPVTLDTPMNR 188
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 2e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
NV +LD+ D S + G LD++ NAGI+ +
Sbjct: 92 NVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEA 133
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 2e-07
Identities = 19/94 (20%), Positives = 32/94 (34%), Gaps = 6/94 (6%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE--TTLATN 67
+ D+ D S+ L + G +D+L NNAG P A+ + TN
Sbjct: 75 DALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTN 134
Query: 68 FFALVTVCHILFPLLRPHA----RVVNVASKLGM 97
F +++ R++N S
Sbjct: 135 LTGPFLCTQEAFRVMKAQEPRGGRIINNGSISAT 168
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 2e-04
Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 7/62 (11%)
Query: 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKI 298
Y+ +K + L+ + S D R DI + G +T + + + + I
Sbjct: 177 YTATKHAITGLT----KSTSLDGRVHDIACGQIDIGNADTPMAQK---MKAGVPQADLSI 229
Query: 299 YL 300
+
Sbjct: 230 KV 231
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 2e-07
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 17/107 (15%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA 60
+ + R+ LD+ + ++ + + G +D LVNNAGI
Sbjct: 43 AATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFL------E 96
Query: 61 ETTLATNFFALVTV--------CHILFPLLRPH--ARVVNVASKLGM 97
++ F +V + + P ++ +VN++S G+
Sbjct: 97 TESVE-RFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGL 142
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 2e-07
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+++ ++++L + SI+K ++I G+D+LVNNAGI RD
Sbjct: 49 EEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDK 99
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 2e-07
Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 17/107 (15%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA 60
+ + + R+ LD+ + D T GGL +LVNNAGI
Sbjct: 45 KAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTI------E 98
Query: 61 ETTLATNFFALVTV--------CHILFPLLRPHAR--VVNVASKLGM 97
+ L + ++ V + ++ R ++N++S G+
Sbjct: 99 DYALT-EWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGL 144
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 3e-07
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF-GQRAETTLATNFF 69
V H D+ S I + + + GG D+LVNNAG+ F ++ + +A N
Sbjct: 78 VLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLS 137
Query: 70 ALVTVCHILFPLLRPHA--RVVNVASKLGM 97
+ P ++ R++N+AS G+
Sbjct: 138 SSFHTIRGAIPPMKKKGWGRIINIASAHGL 167
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 3e-07
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+ + R DI D S+ L +IQ GG+D+LVNNA I
Sbjct: 44 KAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFV 94
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 3e-07
Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 2/92 (2%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAG-IYRDTAPGSFG-QRAETTLATNFFALV 72
+ D+ + + + + G + LV+ AG + L N +L
Sbjct: 64 KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLF 123
Query: 73 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQ 104
P + +V +S+ G P
Sbjct: 124 LTAKTALPKMAKGGAIVTFSSQAGRDGGGPGA 155
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 3e-07
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+D+ D + + ++ + + LD LVN AGI R
Sbjct: 47 PFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMG 88
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 3e-07
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFF 69
H D+ D + I L + + GG+D+LVNNAGI F + + +A N
Sbjct: 53 AVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLS 112
Query: 70 ALVTVCHILFPLLRP--HARVVNVASKLG 96
A+ + P +R R++N+AS G
Sbjct: 113 AVFHGTRLALPGMRARNWGRIINIASVHG 141
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 3e-07
Identities = 16/99 (16%), Positives = 32/99 (32%), Gaps = 6/99 (6%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFF 69
D+ D+ +I + + +D+L+NNAGI + + TN
Sbjct: 60 AHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLT 119
Query: 70 ALVTVCHILFPLLRPHA---RVVNVASKLGML--YNVPS 103
+ V + +++N+ S V
Sbjct: 120 SAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAP 158
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 3e-07
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
K R L++ D +++ L + + G L++LVNNAGI +D
Sbjct: 72 FKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQ 119
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 3e-07
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 3/97 (3%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFF 69
+ D+ + + KL + ++ + G LD +VN AGI R F + N F
Sbjct: 73 TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLF 132
Query: 70 ALVTVCHILFP--LLRPHARVVNVASKLGMLYNVPSQ 104
VC F + ++N+ S +P+
Sbjct: 133 GTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNI 169
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 3e-07
Identities = 15/89 (16%), Positives = 28/89 (31%), Gaps = 3/89 (3%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVT 73
+ DI ++ + GG+D+LVNNA +R + N
Sbjct: 68 KCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFV 127
Query: 74 VCHILFPLLRP--HARVVNVASKLGMLYN 100
P L + ++ +A +
Sbjct: 128 CAQACLPHLLQAPNPHILTLAPPPSLNPA 156
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 4e-07
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP 53
+R+ DI ++ + D + HG L +V+ AG + P
Sbjct: 65 IRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGP 107
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 4e-07
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
K NV + D+ + + + G +D+LVNNAGI RDT
Sbjct: 50 FKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDT 97
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 4e-07
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
K + Q ++ D + + ++ +Q G LD+LVNNAGI RD
Sbjct: 49 IKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDN 96
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 4e-07
Identities = 12/51 (23%), Positives = 21/51 (41%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+KV K + +Q D+ + + K I G + L+ NAG+
Sbjct: 56 EKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVK 106
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 4e-07
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
++ DI + ++ + + G +D LVNNAG++
Sbjct: 69 DIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAK 110
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245 | Back alignment and structure |
|---|
Score = 49.0 bits (118), Expect = 4e-07
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
V ++L+ + L GGLD LVNNAGI RDT
Sbjct: 54 VAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDT 94
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 4e-07
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+ DI D + + + +I+ HG +++L+ NAG+ +D
Sbjct: 65 KCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQ 101
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246 | Back alignment and structure |
|---|
Score = 49.0 bits (118), Expect = 5e-07
Identities = 11/48 (22%), Positives = 22/48 (45%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
K ++ + D+ + + + G +D+LVNNAG+ +D
Sbjct: 49 IKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDN 96
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 5e-07
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 12/96 (12%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR-----DTAPGSFGQRAETTLA 65
V +D+ + + +L GGLD+LVNNAGI DT P F + T+A
Sbjct: 72 VHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLF----DATIA 127
Query: 66 TNFFALVTVCHILFPLLRPHA---RVVNVASKLGML 98
N A + + + ++ VAS +
Sbjct: 128 VNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA 163
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 5e-07
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+ + ++ D S + D ++ + G +D+LVNNAGI RD
Sbjct: 64 DFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDV 105
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266 | Back alignment and structure |
|---|
Score = 49.0 bits (118), Expect = 5e-07
Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 17/105 (16%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGG-LDLLVNNAGIYRDTAPGSFGQRAETT----- 63
V D + KL + + GG LD+L+NN G R + T
Sbjct: 64 QVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPT------LDYTAEDFS 117
Query: 64 --LATNFFALVTVCHILFPLLRP--HARVVNVASKLGMLYNVPSQ 104
++TN + + + PLL+ ++ ++S G++
Sbjct: 118 FHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA-SVG 161
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 5e-07
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF-GQRAETTLATNFF 69
V + D+ ++ L D+ Q G +D+LVNNAGI F ++ + LA N
Sbjct: 57 VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLS 116
Query: 70 ALVTVCHILFPLLRP--HARVVNVASKLGM 97
A+ P ++ R++N+AS G+
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGL 146
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 5e-07
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+ + + +D+ D S + + + G +D+L+NNAGI RD
Sbjct: 76 DFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDA 117
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 5e-07
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
K+ + D+ + I ++ + I T+H +D+LVNNAGI RD
Sbjct: 88 IKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDN 135
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249 | Back alignment and structure |
|---|
Score = 48.6 bits (117), Expect = 6e-07
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
V + D+ + + + G D+LVNNAGIY
Sbjct: 55 RVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLI 96
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 6e-07
Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFF 69
+D+ ++ D + G +D+L+N A G+ A +T + +
Sbjct: 79 CLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTS 138
Query: 70 ALVTVCHILFPLL--RPHARVVNVASKLG 96
V +L+ +VN+ + LG
Sbjct: 139 GTFNVSRVLYEKFFRDHGGVIVNITATLG 167
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 6e-07
Identities = 9/37 (24%), Positives = 22/37 (59%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
++D+ D ++ + ++ G +++LV+NAG+ D
Sbjct: 59 EVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADA 95
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 6e-07
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP 53
R + D+ + ++ D + G +D L NNAG AP
Sbjct: 57 EARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAP 100
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 6e-07
Identities = 11/51 (21%), Positives = 22/51 (43%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+++ K + ++ + S KL D+ G +D + NAG D+
Sbjct: 65 KELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADS 115
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244 | Back alignment and structure |
|---|
Score = 48.6 bits (117), Expect = 6e-07
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
D+ ++ + + G +D++VNNAGI RDT
Sbjct: 57 GGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDT 93
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 6e-07
Identities = 9/41 (21%), Positives = 16/41 (39%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+ ++ D+ + Q G + +LVNNAG
Sbjct: 63 AIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPK 103
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 6e-07
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 16/99 (16%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGG-LDLLVNNAGIYRDTAPGSFGQRAETT----- 63
NV D+L ++ KL + G L++LVNNAG+ + T
Sbjct: 71 NVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEA------KDFTEKDYN 124
Query: 64 --LATNFFALVTVCHILFPLLRP--HARVVNVASKLGML 98
+ TNF A + I +PLL+ + V+ ++S G
Sbjct: 125 IIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS 163
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 7e-07
Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 11/97 (11%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQ----RAETTLATNFFA 70
D+ + + I + + Q G LD LVNNAGI + R E L N
Sbjct: 82 PGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQR--VDEMSVERIERMLRVNVTG 139
Query: 71 LVTVC-HILFPLLRPHA----RVVNVASKLGMLYNVP 102
+ + + R ++ +VNV+S +L +
Sbjct: 140 SILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT 176
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 7e-07
Identities = 11/48 (22%), Positives = 18/48 (37%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+ D+ I L + ++G +D+LVNNAG
Sbjct: 66 LREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG 113
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253 | Back alignment and structure |
|---|
Score = 48.6 bits (117), Expect = 7e-07
Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 16/106 (15%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA 60
Q++ F + D+ ++ + +Q + G L++LVNNAGI PG
Sbjct: 44 QQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGI---LLPGDM---E 97
Query: 61 ETTLATNFFALVTV--------CHILFPLLRPH-ARVVNVASKLGM 97
L F L+ + C ++ ++N+AS
Sbjct: 98 TGRLED-FSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSW 142
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 8e-07
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+ D+ +S + L + + G LD+LVNNAGI RDT
Sbjct: 84 KADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDT 120
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 9e-07
Identities = 20/98 (20%), Positives = 32/98 (32%), Gaps = 6/98 (6%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFF 69
D+ D + +++ +D+LVNNAGI L N
Sbjct: 81 AEAVVADLADLEGAANVAEELA-ATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLD 139
Query: 70 ALVTVCHILFPLL--RPHARVVNVASKLGML--YNVPS 103
A + + R+V +AS L NV +
Sbjct: 140 AAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAA 177
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 9e-07
Identities = 6/42 (14%), Positives = 15/42 (35%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
D+ D ++ + + + G L + + AG+
Sbjct: 53 EAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSA 94
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 9e-07
Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 8/93 (8%)
Query: 13 FHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE---TTLATNFF 69
+ DI + + L D ++ G +D+LVNNAG F N F
Sbjct: 64 ACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKP---FDMPMADFRRAYELNVF 120
Query: 70 ALVTVCHILFPLLRP--HARVVNVASKLGMLYN 100
+ + ++ P + ++ + S N
Sbjct: 121 SFFHLSQLVAPEMEKNGGGVILTITSMAAENKN 153
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 9e-07
Identities = 18/96 (18%), Positives = 33/96 (34%), Gaps = 4/96 (4%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFF 69
+ D+ + + D + + GG+D+ V NAGI A + TN
Sbjct: 83 ALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVT 142
Query: 70 ALVTVCHILFPLLRPHAR---VVNVASKLGMLYNVP 102
+ + ++ AS G + N+P
Sbjct: 143 GVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP 178
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 9e-07
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+D+ D +S+ + + G LD +V+ AGI RD
Sbjct: 55 VMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDN 91
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 9e-07
Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 7/100 (7%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFF 69
V Q D+ D + ++ G ++++NNA + A +T
Sbjct: 78 VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLN 137
Query: 70 ALVTVCHILFP-LLRPH--ARVVNVAS---KLGMLYNVPS 103
V + L++ A +++ + + G + VPS
Sbjct: 138 GTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPS 177
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 1e-06
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 17/107 (15%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAG-IYRDT-----APGSFGQRAETTL 64
F D+ + +L D+ + GG+D+L+NNAG + + + +
Sbjct: 59 AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFY----DAVM 114
Query: 65 ATNFFALVTVCHILFPLLRPHA-------RVVNVASKLGMLYNVPSQ 104
N ++V P L A V++ S G P
Sbjct: 115 DANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGA 161
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 1e-06
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGG-LDLLVNNAGIYRDT-----APGSFGQRAETTLATNF 68
LD+ ++ K+ + HGG +D+LVNNAGI RD + + +A N
Sbjct: 265 TLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRW----DAVIAVNL 320
Query: 69 FALVTVCHILFP--LLRPHARVVNVAS 93
A + L + RV+ ++S
Sbjct: 321 LAPQRLTEGLVGNGTIGEGGRVIGLSS 347
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 1e-06
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
++D+ ++S+ GG DLL NAG+
Sbjct: 64 EVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMR 100
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 1e-06
Identities = 20/109 (18%), Positives = 32/109 (29%), Gaps = 23/109 (21%)
Query: 15 QLDILDQSSIH----KLHDDIQTQHGGLDLLVNNAGIYRDT-----APGSFGQRAETT-- 63
+ D+ SS+ + D G D+LVNNA Y T + A+
Sbjct: 68 KGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDA 127
Query: 64 -----LATNFFALVTVCHILFPLLRPHA-------RVVNVASKLGMLYN 100
+N A + + VVN+ + L
Sbjct: 128 QVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPL 176
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 1e-06
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP 53
V + D+ + + + + +D+L NNAGI P
Sbjct: 57 EVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTP 100
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 1e-06
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 13 FHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+ D+ +S + L + G LD+++NNAG+
Sbjct: 61 AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPV 99
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 1e-06
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQ-HGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATN 67
V D+ +S +L + + HG L++LVNNAGI + ++ N
Sbjct: 59 KVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSIN 118
Query: 68 FFALVTVCHILFPLLRP--HARVVNVASKLGML 98
F A + + P L+ VV ++S G L
Sbjct: 119 FEAAYHLSVLAHPFLKASERGNVVFISSVSGAL 151
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 1e-06
Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP--GSFGQRAETTLATN 67
+V + +L HGG+D+LV+NA + + + + L N
Sbjct: 64 SVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVN 123
Query: 68 FFALVTVCHILFPLL--RPHARVVNVAS 93
A V + + P + R V+ V+S
Sbjct: 124 VKATVLMTKAVVPEMEKRGGGSVLIVSS 151
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 1e-06
Identities = 10/50 (20%), Positives = 19/50 (38%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD 50
++ VRF D+ +++ + + G + LVN AG
Sbjct: 45 EEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPG 94
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 1e-06
Identities = 18/96 (18%), Positives = 28/96 (29%), Gaps = 11/96 (11%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFF 69
N D+ + + G +D L+ NAGI+ + E + F
Sbjct: 52 NAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTA--LADLPEDKIDAAFD 109
Query: 70 ALVTV-------C--HILFPLLRPHARVVNVASKLG 96
+ V L L+ VV S G
Sbjct: 110 DIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAG 145
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 13/109 (11%), Positives = 26/109 (23%), Gaps = 23/109 (21%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT---------------APGSFGQR 59
+ + +L T G D+LVNNA + T +
Sbjct: 83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETA 142
Query: 60 AETTLATNFFALVTVCHILFPLLRPHA--------RVVNVASKLGMLYN 100
+N A + + ++N+ +
Sbjct: 143 TADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL 191
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 2e-06
Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 13/92 (14%)
Query: 13 FHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETT-------LA 65
DI D + + L D+ +G +D+++NNA P A TT +
Sbjct: 64 SVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKP-----FANTTFEHMRDAIE 118
Query: 66 TNFFALVTVCHILFPLLRPHA-RVVNVASKLG 96
F + + P L VVNV S +
Sbjct: 119 LTVFGALRLIQGFTPALEESKGAVVNVNSMVV 150
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 2e-06
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 5/101 (4%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE-- 61
C+ DI D + + +L I ++G +D LVNNAG+ R S +
Sbjct: 53 CRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFG-ALSDLTEEDFD 111
Query: 62 TTLATNFFALVTVCHILFPLL--RPHARVVNVASKLGMLYN 100
T+ TN + LF L+ + + + S
Sbjct: 112 YTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF 152
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 2e-06
Identities = 15/104 (14%), Positives = 37/104 (35%), Gaps = 19/104 (18%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETT------ 63
++ LD+ + I + +++ LD+L N AG G +
Sbjct: 51 GIQTRVLDVTKKKQIDQFANEV----ERLDVLFNVAGFVHH------GTVLDCEEKDWDF 100
Query: 64 -LATNFFALVTVCHILFPLLRPH--ARVVNVASKLGMLYNVPSQ 104
+ N ++ + P + ++N++S + V ++
Sbjct: 101 SMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNR 144
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 2e-06
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGS---FGQRAETTLATN 67
++D+ D++++ + + + G LD++V NAGI A F +
Sbjct: 73 AYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAF----ADAFDVD 128
Query: 68 FFALVTVCHILFPLLRPHARVVNVASKLGM 97
F ++ H P L A ++ S G+
Sbjct: 129 FVGVINTVHAALPYLTSGASIITTGSVAGL 158
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 2e-06
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
V D+ ++ L + G LD+LVNNAG+ T
Sbjct: 75 VEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQT 115
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 2e-06
Identities = 13/109 (11%), Positives = 26/109 (23%), Gaps = 23/109 (21%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT---------------APGSFGQR 59
+ + +L T G D+LVNNA + T +
Sbjct: 120 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETA 179
Query: 60 AETTLATNFFALVTVCHILFPLLRPHA--------RVVNVASKLGMLYN 100
+N A + + ++N+ +
Sbjct: 180 TADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL 228
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 2e-06
Identities = 9/41 (21%), Positives = 15/41 (36%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
V D+ +H + G + +LVN+AG
Sbjct: 75 VDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGG 115
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 2e-06
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP 53
+ D+ D+ + D+ + G LD++V NAGI AP
Sbjct: 79 AIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAP 121
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 2e-06
Identities = 13/46 (28%), Positives = 19/46 (41%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF 56
+D+ D S + D + GG+D LVNNA I+
Sbjct: 60 AISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFL 105
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 2e-06
Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 17/93 (18%)
Query: 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLA--- 65
NNV + D+ + +L + + +V++AG G FG E
Sbjct: 47 NNVGYRARDLASHQEVEQLFEQL---DSIPSTVVHSAGS------GYFGLLQEQDPEQIQ 97
Query: 66 ----TNFFALVTVCHILFPLLRPHAR-VVNVAS 93
N + + V L + VV + S
Sbjct: 98 TLIENNLSSAINVLRELVKRYKDQPVNVVMIMS 130
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 2e-06
Identities = 11/97 (11%), Positives = 26/97 (26%), Gaps = 12/97 (12%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR-----DTAPGSFGQRAETTLA 65
+ LD ++ + + H L++ + N G +T F
Sbjct: 58 IVARSLDARNEDEVTAFLNAAD-AHAPLEVTIFNVGANVNFPILETTDRVF----RKVWE 112
Query: 66 TNFFALVTVCHILFPLLRPHA--RVVNVASKLGMLYN 100
+A L+ H ++ + +
Sbjct: 113 MACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG 149
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 3e-06
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD 50
+ K NN F D+ + + + + G +D+ VN AGI
Sbjct: 50 EAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVA 99
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 3e-06
Identities = 21/105 (20%), Positives = 35/105 (33%), Gaps = 17/105 (16%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE----TTLA 65
V DI + I +L + + GG D+LV + G PG F + +
Sbjct: 59 QVDIVAGDIREPGDIDRLFEKAR-DLGGADILVYSTGG---PRPGRFMELGVEDWDESYR 114
Query: 66 TNFFALVTVCHILFPLL--RPHARVVNVASKLG-------MLYNV 101
+ V V + + R+V + S L N+
Sbjct: 115 LLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNI 159
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 3e-06
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
V Q +I ++ ++ L G ++ LVNN G +
Sbjct: 74 VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLS 114
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 3e-06
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
F Q+D+ D+ + ++ G +D+LVNNA I
Sbjct: 52 AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPG 91
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 3e-06
Identities = 13/100 (13%), Positives = 31/100 (31%), Gaps = 7/100 (7%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFF 69
+ Q+D+ + I K+ + I + G +D+L+NNA + +
Sbjct: 57 ILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLN 116
Query: 70 ALVTVCHILFPLLRPH---ARVVNVAS---KLGMLYNVPS 103
+ ++N+ + + S
Sbjct: 117 GTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHS 156
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 3e-06
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
++D+ D+ I + D GG+D LV NAG+
Sbjct: 76 GAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLA 117
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 4e-06
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
++D+ D+ + + + GG D++VNNAG+ T
Sbjct: 53 AVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPST 93
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 4e-06
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
Q+D+ Q SI GGLD+LVNNA ++
Sbjct: 55 AAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLA 96
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 4e-06
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAG--IYRDT 51
++ K+ ++F Q D+ + +HK+ ++ + G +D L+NNAG ++
Sbjct: 49 KETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERK 101
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 5e-06
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 13/96 (13%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETT------ 63
F D+ + + L + + G LD +VNNAG + ET+
Sbjct: 55 GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQR-----PEETSAQGFRQ 109
Query: 64 -LATNFFALVTVCHILFPLLRP-HARVVNVASKLGM 97
L N T+ + P LR V+N++S +G
Sbjct: 110 LLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGA 145
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 5e-06
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
F LD+ D+++ D+ + GG D+LVNNAGI +
Sbjct: 54 KAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIK 95
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 5e-06
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+ D+ + + D I ++G + +LVNNAGI
Sbjct: 48 YDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYG 88
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 5e-06
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG----QRAETTLATNFFALV 72
D+ D+S L + GGLD+L AG TA ++ + T A N FAL
Sbjct: 108 DLSDESFARSLVHKAREALGGLDILALVAGKQ--TAIPEIKDLTSEQFQQTFAVNVFALF 165
Query: 73 TVCHILFPLLRPHARVVNVAS 93
+ PLL A ++ +S
Sbjct: 166 WITQEAIPLLPKGASIITTSS 186
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 6e-06
Identities = 19/107 (17%), Positives = 30/107 (28%), Gaps = 22/107 (20%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETT------- 63
D+ D++ L + + GGLD NNAG + +
Sbjct: 59 AAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGE-----ISSLSVEGWRET 113
Query: 64 LATN----FFALVTVCHILFPLLRPH--ARVVNVASKLGMLYNVPSQ 104
L TN F A P + + +S +G
Sbjct: 114 LDTNLTSAFLA----AKYQVPAIAALGGGSLTFTSSFVGHTAGFAGV 156
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 6e-06
Identities = 12/53 (22%), Positives = 23/53 (43%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP 53
++V + DI ++ + + ++ G +D+LVNNAGI
Sbjct: 47 ERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQN 99
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 6e-06
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP 53
H D+ +I + HG D+LVNNAG+ P
Sbjct: 80 AESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGP 122
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 6e-06
Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 4/95 (4%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFF 69
D+ D ++ + + + +LVN+AGI R +A N
Sbjct: 60 AARIVADVTDAEAMTAAAAEAE-AVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVD 118
Query: 70 ALVTVCHILFP--LLRPHARVVNVASKLGMLYNVP 102
+ + R +VN+ S G + N P
Sbjct: 119 GMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRP 153
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 6e-06
Identities = 16/94 (17%), Positives = 34/94 (36%), Gaps = 9/94 (9%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE----TTLA 65
++D+ + + + G +D+LVNNAG G+ E ++
Sbjct: 74 KAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGF---GTTGNVVTIPEETWDRIMS 130
Query: 66 TNFFALVTVCHILFPLLRPH--ARVVNVASKLGM 97
N + + P++R + ++N S
Sbjct: 131 VNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTAT 164
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 8e-06
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 15 QLDILD----QSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
Q D+ + +S ++ + G D+LVNNA + T
Sbjct: 80 QADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT 120
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 8e-06
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 36 GGLDLLVNNAGIYRDTAPGSFGQRAE----TTLATNFFALVTVCHILFPLLRP--HARVV 89
G +D++VNNAGI RD SF + ++ + V + ++ + R++
Sbjct: 91 GRIDVVVNNAGILRD---RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRII 147
Query: 90 NVASKLGMLYNV 101
AS G+ N
Sbjct: 148 MTASASGIYGNF 159
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 1e-05
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
V F + D+ D SS D + + G +D LVNNAGI
Sbjct: 81 VIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIV 121
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 1e-05
Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG----QRAETTLATNFFALV 72
D+ D+ + + Q G L++LVNN ++ E T N F+
Sbjct: 105 DLSDEQHCKDIVQETVRQLGSLNILVNNVAQ--QYPQQGLEYITAEQLEKTFRINIFSYF 162
Query: 73 TVCHILFPLLRPHARVVNVAS 93
V L+ ++N AS
Sbjct: 163 HVTKAALSHLKQGDVIINTAS 183
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 14/90 (15%), Positives = 32/90 (35%), Gaps = 7/90 (7%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNF 68
++ D+ + + + ++ +D+L+NN GI+ N
Sbjct: 62 ILQPVVADLGTEQGCQDVIE----KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNI 117
Query: 69 FALVTVCHILFPLL--RPHARVVNVASKLG 96
+ V + + R RV+ +AS+
Sbjct: 118 MSGVRLTRSYLKKMIERKEGRVIFIASEAA 147
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 2e-05
Identities = 15/95 (15%), Positives = 25/95 (26%), Gaps = 4/95 (4%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFF 69
D L++ L GGL +LV+ A + L +
Sbjct: 45 AVPLPTD-LEKDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLD 103
Query: 70 ALVTVCHILFPLLRP--HARVVNVASKLGMLYNVP 102
+ P + RV+ + S P
Sbjct: 104 VAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGP 138
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 2e-05
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGG-LDLLVNNAGIYRDT 51
Q D+ + + L + +Q ++V+ AGI +D
Sbjct: 69 QADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDE 106
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 2e-05
Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 16/95 (16%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR-----DTAPGSFGQRAETTL 64
+ +D+ D + + G +DLLVNNA + + +F + +
Sbjct: 53 GIEPVCVDLGDWEATERALG----SVGPVDLLVNNAAVALLQPFLEVTKEAF----DRSF 104
Query: 65 ATNFFALVTVCHILFPLLRPHAR---VVNVASKLG 96
N A++ V I+ L +VNV+S+
Sbjct: 105 EVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS 139
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 2e-05
Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+ + +N ++ ++ L + LD+LV NAGI DT
Sbjct: 52 KSLGNALKDNYTIEVCNLANKEECSNLIS----KTSNLDILVCNAGITSDT 98
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 2e-05
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 14 HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
++D+ D++++ + + GG+D+ + NAGI
Sbjct: 76 AKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIA 113
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 2e-05
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE--TTLATNF 68
+ ++D+ D ++ D Q G LD++V NAGI + + N
Sbjct: 78 IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINL 137
Query: 69 FALVTVCHILFPLLRPHAR---VVNVASKLGM 97
+ P + R ++ +S G+
Sbjct: 138 AGVWKTVKAGVPHMIAGGRGGSIILTSSVGGL 169
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 2e-05
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP 53
+ Q+D+ D ++ DD TQ G LD+++ NA + +
Sbjct: 91 IIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTR 133
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 2e-05
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 36 GGLDLLVNNAGIYRDTAPGSFGQRAE----TTLATNFFALVTVCHILFPLLRP--HARVV 89
G +D+LVNNAGI RD SF + ++ + + + + +P R++
Sbjct: 394 GTIDILVNNAGILRD---RSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRII 450
Query: 90 NVASKLGMLYNV 101
N+ S G+ N
Sbjct: 451 NITSTSGIYGNF 462
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 4e-05
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 36 GGLDLLVNNAGIYRDTAPGSFGQRAE----TTLATNFFALVTVCHILFPLLRP--HARVV 89
G + +++NNAGI RD S + E + + V +P + + R+V
Sbjct: 90 GTVHVIINNAGILRD---ASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIV 146
Query: 90 NVASKLGMLYNV 101
N +S G+ N
Sbjct: 147 NTSSPAGLYGNF 158
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 2e-05
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD 50
F Q D+ DQ + + G LD+LVNNAG+ +
Sbjct: 59 KTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE 99
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 2e-05
Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 16/97 (16%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR-----DTAPGSFGQRAETTL 64
+ +D+ D + K G +DLLVNNA + + +F + +
Sbjct: 53 GIEPVCVDLGDWDATEKALG----GIGPVDLLVNNAALVIMQPFLEVTKEAF----DRSF 104
Query: 65 ATNFFALVTVCHILFPLLRPHA---RVVNVASKLGML 98
+ N ++ V ++ + +VNV+S + +
Sbjct: 105 SVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV 141
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 3e-05
Identities = 10/41 (24%), Positives = 24/41 (58%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
++D+ ++ + + + ++G +D+LVNNAGI + +
Sbjct: 55 SDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYS 95
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 3e-05
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 36 GGLDLLVNNAGIYRDTAPGSFGQRAE----TTLATNFFALVTVCHILFPLLR--PHARVV 89
G +D+LVNNAGI RD S + +E + FP ++ + R++
Sbjct: 101 GRVDILVNNAGILRD---RSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRII 157
Query: 90 NVASKLGMLYNV 101
+S G+ N
Sbjct: 158 MTSSNSGIYGNF 169
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 4e-05
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI 47
H +D+ ++ S+ L D G LD++ NNA
Sbjct: 58 GAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAH 95
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 4e-05
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP 53
V D+ D++ + + G +D NNAGI P
Sbjct: 66 VLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNP 108
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 5e-05
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+ Q D+ D +S+ + D+ + G +D+LV+N GI
Sbjct: 109 IIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQG 149
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 6e-05
Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 4/91 (4%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFF 69
LD+ D +++ +L D Q G LD++V NAG+ +T + N
Sbjct: 79 ALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLT 138
Query: 70 ALVTVCHILFPLLRPHAR---VVNVASKLGM 97
P + +V V+S G+
Sbjct: 139 GTWRTLRATVPAMIEAGNGGSIVVVSSSAGL 169
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 7e-05
Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD 50
+ V + + RF D+ D++++ D + G L ++VN AG
Sbjct: 44 EDVVADLGDRARFAAADVTDEAAVASALDLAE-TMGTLRIVVNCAGTGNA 92
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 9e-05
Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 4/91 (4%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFF 69
+ +D D + K+ DD G LD++V NAG+ A + N
Sbjct: 75 IVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVT 134
Query: 70 ALVTVCHILFPLLRPHAR---VVNVASKLGM 97
P + R ++ ++S GM
Sbjct: 135 GTWNTVMAGAPRIIEGGRGGSIILISSAAGM 165
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 1e-04
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 6/67 (8%)
Query: 1 QKVCK--NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQ 58
QKVC + + + F D+ + L D +HG LD++ N G+ T
Sbjct: 54 QKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSI--- 110
Query: 59 RAETTLA 65
E
Sbjct: 111 -LEAGNE 116
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 2e-04
Identities = 30/175 (17%), Positives = 51/175 (29%), Gaps = 32/175 (18%)
Query: 125 TDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP--HARVV 182
+ G LD ++ A + +A N+F + + L L V
Sbjct: 54 AVLDRCGGVLDGLVCCAGVGVTAANSGL---VVAVNYFGVSALLDGLAEALSRGQQPAAV 110
Query: 183 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMT----DYVQLAKEGKDKEAGWPEFS 238
V S +L + D + + + + G +
Sbjct: 111 IVGSIAATQ----------------PGAAELPMVEAMLAGDEARAIELAE--QQGQTHLA 152
Query: 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGK 293
Y+ SK V L+ D + +N V PG V T L + P G+
Sbjct: 153 YAGSKYAVTCLA----RRNVVDWAGRGVRLNVVAPGAVETPLLQA-SKADPRYGE 202
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 2e-04
Identities = 5/47 (10%), Positives = 14/47 (29%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI 47
+ + N F ++ + S+ + +V + G
Sbjct: 68 KALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGF 114
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 15/78 (19%)
Query: 36 GGLDLLVNNAGIYRDTAPGSFGQRAE----TTLATNFFALVTVCHILFPLLRP------- 84
GGLD+LVNNAGI RD +E +A + R
Sbjct: 113 GGLDVLVNNAGIVRD---RMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKA 169
Query: 85 -HARVVNVASKLGMLYNV 101
R++N +S G+ +V
Sbjct: 170 VDGRIINTSSGAGLQGSV 187
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 3e-04
Identities = 6/41 (14%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD 50
++ + + D+ + + + Q + L +V+ AG+
Sbjct: 40 DLIYVEGDVTREEDVRRAVARAQ-EEAPLFAVVSAAGVGLA 79
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 4e-04
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR 49
+ Q D+ D+ S+ + G LD++V NAGI
Sbjct: 76 IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP 114
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 5e-04
Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 14/87 (16%)
Query: 14 HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-----ETTLATNF 68
H+ + D + K D + + +D+LV NAG G F + + + F
Sbjct: 61 HRYVVCD---LRKDLDLLFEKVKEVDILVLNAGG---PKAGFF-DELTNEDFKEAIDSLF 113
Query: 69 FALVTVCHILFPLL--RPHARVVNVAS 93
++ + P + + R+V + S
Sbjct: 114 LNMIKIVRNYLPAMKEKGWGRIVAITS 140
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 40.2 bits (93), Expect = 7e-04
Identities = 32/253 (12%), Positives = 68/253 (26%), Gaps = 69/253 (27%)
Query: 4 CKNN--NNNVRFHQLDILDQSSIHKLHDDIQTQ--------HG----GLDLLVNNAGIYR 49
++ N+N F + ++ KL + G G + +
Sbjct: 115 QRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV--CL 172
Query: 50 DTA-----PG-----SFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLY 99
+ L + + + P + +S + +
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPETVLE--MLQKLLYQIDP---NWTSRSDHSSNIKLRI 227
Query: 100 NVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLAT 159
+ ELR+ L ++ E+ LL + VQ K + A +
Sbjct: 228 HSIQAELRRLLKSKPY-ENCLLVL--LNVQNA----KAWN-AFN-----LS--------- 265
Query: 160 NFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTD 219
C IL R V L + + + +LT D++ ++
Sbjct: 266 --------CKILLT-----TRFKQVTDFLS---AATTTHISLDHHSMTLTPDEVKSLLLK 309
Query: 220 YVQLAKEGKDKEA 232
Y+ + +E
Sbjct: 310 YLDCRPQDLPREV 322
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 313 | |||
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 100.0 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.98 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.97 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.97 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.97 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.97 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.97 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.97 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.96 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.96 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.94 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.94 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.94 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.94 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.93 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.93 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.93 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.93 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.93 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.93 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.93 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.93 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.93 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.93 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.93 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.93 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.93 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.93 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.93 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.93 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.93 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.93 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.93 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.93 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.93 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.92 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.92 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.92 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.92 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.92 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.92 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.92 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.92 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.92 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.92 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.92 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.92 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.92 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.92 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.92 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.92 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.92 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.92 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.92 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.92 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.92 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.92 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.92 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.92 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.92 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.92 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.92 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.92 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.91 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.91 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.91 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.91 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.91 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.91 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.91 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.91 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.91 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.91 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.91 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.91 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.91 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.91 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.91 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.91 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.91 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.91 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.91 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.91 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.91 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.91 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.91 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.91 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.91 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.91 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.9 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.9 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.9 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.9 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.9 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.9 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.9 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.9 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.9 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.9 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.9 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.9 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.9 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.9 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.9 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.9 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.9 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.9 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.9 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.9 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.9 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.9 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.9 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.9 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.9 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.9 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.9 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.9 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.9 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.9 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.89 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.89 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.89 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.89 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.89 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.89 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.89 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.89 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.89 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.89 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.89 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.89 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.89 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.89 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.89 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.89 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.89 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.89 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.89 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.89 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.89 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.89 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.89 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.89 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.89 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.88 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.88 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.88 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.88 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.88 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.88 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.88 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.88 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.88 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.88 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.88 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.88 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.87 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.87 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.87 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.87 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.87 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.87 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.87 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.87 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.87 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.87 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.87 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.87 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.87 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.86 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.86 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.86 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.86 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.86 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.86 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.86 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.86 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.86 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.86 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.86 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.86 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.86 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.86 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.86 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.86 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.85 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.85 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.85 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.85 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.84 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.84 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.84 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.84 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.84 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.84 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.84 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.84 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.84 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.83 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.83 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.83 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.83 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.83 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.82 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.82 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.81 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.81 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.81 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.81 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.8 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.79 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.77 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.74 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.71 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.71 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.7 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.7 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.69 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.65 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.63 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.58 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.54 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.5 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.49 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.45 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.35 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.33 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.32 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.27 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.21 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.21 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.19 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.18 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.16 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.14 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.11 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.1 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.08 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.06 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.06 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.05 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.05 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.04 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.04 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.04 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.03 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.03 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.01 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.0 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.0 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 98.99 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 98.98 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 98.97 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.97 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 98.97 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 98.97 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 98.96 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 98.94 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 98.93 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 98.93 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 98.93 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 98.9 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.9 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 98.89 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 98.88 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 98.87 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 98.86 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 98.83 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 98.83 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 98.82 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.81 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 98.8 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 98.78 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.77 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 98.76 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 98.76 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 98.73 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 98.73 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 98.71 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 98.71 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 98.7 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 98.69 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 98.67 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 98.66 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 98.66 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 98.64 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 98.59 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 98.58 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 98.57 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 98.56 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 98.56 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 98.55 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 98.55 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 98.55 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 98.53 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 98.53 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 98.52 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 98.51 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 98.51 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 98.51 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 98.51 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 98.51 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 98.5 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 98.5 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 98.5 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 98.49 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 98.49 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 98.49 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 98.49 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 98.48 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 98.47 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 98.46 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 98.46 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 98.46 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 98.46 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 98.46 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 98.46 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 98.45 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.45 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 98.44 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 98.44 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 98.44 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 98.44 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 98.44 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 98.44 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 98.43 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.43 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 98.43 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 98.43 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 98.43 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 98.43 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 98.43 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 98.42 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.42 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 98.42 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 98.42 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 98.42 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 98.42 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 98.41 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 98.41 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 98.41 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 98.41 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 98.4 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 98.39 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 98.39 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 98.39 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 98.39 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 98.38 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 98.37 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 98.37 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 98.37 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 98.37 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 98.37 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 98.37 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 98.37 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 98.37 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 98.36 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 98.36 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 98.35 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 98.35 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 98.34 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 98.34 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 98.33 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 98.33 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.33 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 98.33 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.33 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 98.33 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 98.33 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 98.33 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 98.32 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 98.32 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 98.32 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 98.32 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 98.31 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 98.31 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 98.31 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 98.3 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 98.3 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 98.3 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 98.3 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 98.3 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 98.3 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 98.29 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 98.29 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 98.29 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 98.29 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 98.29 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 98.29 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 98.28 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 98.28 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 98.28 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.27 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 98.27 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 98.27 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 98.27 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.27 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 98.27 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 98.27 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 98.26 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 98.26 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.25 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 98.25 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 98.25 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 98.25 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 98.25 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 98.25 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 98.24 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 98.24 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 98.24 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 98.24 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 98.24 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 98.24 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 98.24 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 98.24 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 98.24 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 98.23 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 98.23 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 98.22 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 98.22 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 98.22 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 98.22 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 98.22 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 98.21 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 98.21 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 98.21 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 98.2 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 98.2 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 98.2 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 98.2 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 98.2 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.19 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 98.18 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.16 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 98.16 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 98.15 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 98.12 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 98.12 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 98.11 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 98.11 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 98.11 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 98.1 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 98.1 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 98.1 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 98.09 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 98.09 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.08 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 98.08 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 98.07 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 98.07 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 98.07 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 98.06 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 98.05 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 98.05 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 98.05 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 98.04 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 98.04 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 98.03 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 98.03 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 98.03 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.02 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 98.02 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 98.02 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 98.01 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 98.01 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 98.01 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 98.0 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 97.99 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 97.99 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 97.98 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 97.97 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 97.97 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 97.97 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 97.97 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 97.95 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 97.94 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 97.94 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 97.93 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 97.92 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 97.91 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 97.91 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 97.91 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 97.91 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 97.89 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 97.89 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 97.89 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 97.88 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 97.87 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 97.87 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 97.83 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 97.83 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 97.82 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 97.81 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 97.79 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 97.79 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 97.79 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 97.78 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 97.75 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 97.74 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 97.69 |
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-33 Score=253.27 Aligned_cols=171 Identities=20% Similarity=0.248 Sum_probs=135.4
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
++++.|.++.+++||++|+++++++++.+.++||+||+||||||+... .++++++ ++|++++++|+.++|+++|+++|
T Consensus 50 ~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p 129 (254)
T 4fn4_A 50 ELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIP 129 (254)
T ss_dssp HHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 456678999999999999999999999999999999999999998764 4677776 88999998888888888888888
Q ss_pred cccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcc
Q psy2266 81 LLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATN 160 (313)
Q Consensus 81 ~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N 160 (313)
.|++
T Consensus 130 ~m~~---------------------------------------------------------------------------- 133 (254)
T 4fn4_A 130 IMLK---------------------------------------------------------------------------- 133 (254)
T ss_dssp HHHH----------------------------------------------------------------------------
T ss_pred HHHH----------------------------------------------------------------------------
Confidence 7754
Q ss_pred cccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchh
Q psy2266 161 FFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYS 240 (313)
Q Consensus 161 ~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 240 (313)
+++|+|||+||.++.. +.++..+|+
T Consensus 134 ---------------~~~G~IVnisS~~g~~----------------------------------------~~~~~~~Y~ 158 (254)
T 4fn4_A 134 ---------------QGKGVIVNTASIAGIR----------------------------------------GGFAGAPYT 158 (254)
T ss_dssp ---------------HTCEEEEEECCGGGTC----------------------------------------SSSSCHHHH
T ss_pred ---------------cCCcEEEEEechhhcC----------------------------------------CCCCChHHH
Confidence 1236677777776654 123345699
Q ss_pred hhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhh-hhhhhcccCCccc
Q psy2266 241 VSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIR-QKIYLLKRTNKFQ 308 (313)
Q Consensus 241 ~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~~l~r~~~~~ 308 (313)
+||+|+.+|+|.++.|++++ |||||+|+||+|+|||............+.. ....|++|+|+..
T Consensus 159 asKaal~~ltr~lA~ela~~----gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pe 223 (254)
T 4fn4_A 159 VAKHGLIGLTRSIAAHYGDQ----GIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPE 223 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHH
T ss_pred HHHHHHHHHHHHHHHHhhhh----CeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHH
Confidence 99999999999999999987 9999999999999999776533332222222 3445789998753
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-32 Score=252.87 Aligned_cols=171 Identities=17% Similarity=0.183 Sum_probs=138.7
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
++++.|.++..++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|+.++|+++|++.|.
T Consensus 52 ~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~ 131 (255)
T 4g81_D 52 TLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKR 131 (255)
T ss_dssp HHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3456688999999999999999999999999999999999999999888888877 999999988888888888888887
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++.
T Consensus 132 m~~~---------------------------------------------------------------------------- 135 (255)
T 4g81_D 132 MIAR---------------------------------------------------------------------------- 135 (255)
T ss_dssp HHHH----------------------------------------------------------------------------
T ss_pred HHHc----------------------------------------------------------------------------
Confidence 7320
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
..+|+|||+||..+.. +.+...+|++
T Consensus 136 --------------~~~G~IVnisS~~~~~----------------------------------------~~~~~~~Y~a 161 (255)
T 4g81_D 136 --------------NSGGKIINIGSLTSQA----------------------------------------ARPTVAPYTA 161 (255)
T ss_dssp --------------TCCEEEEEECCGGGTS----------------------------------------BCTTCHHHHH
T ss_pred --------------cCCCEEEEEeehhhcC----------------------------------------CCCCchhHHH
Confidence 1125666666666654 1233456999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
||+|+..|+|.++.|++++ |||||+|+||+|+|||.+... .+++..+......|++|+|+..
T Consensus 162 sKaal~~ltr~lA~ela~~----gIrVN~V~PG~i~T~~~~~~~-~~~~~~~~~~~~~Pl~R~g~pe 223 (255)
T 4g81_D 162 AKGGIKMLTCSMAAEWAQF----NIQTNAIGPGYILTDMNTALI-EDKQFDSWVKSSTPSQRWGRPE 223 (255)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCGGGHHHH-TCHHHHHHHHHHSTTCSCBCGG
T ss_pred HHHHHHHHHHHHHHHhccc----CeEEEEEeeCCCCCchhhccc-CCHHHHHHHHhCCCCCCCcCHH
Confidence 9999999999999999987 999999999999999987642 2334445566788999999764
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=273.02 Aligned_cols=240 Identities=19% Similarity=0.278 Sum_probs=189.1
Q ss_pred EeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC--CceEEEE
Q psy2266 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP--HARVVNV 91 (313)
Q Consensus 15 ~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~--~g~IV~i 91 (313)
.+|++|.++++++++.+.++||+||+||||||+....++.+++ ++|++++++|++|++.++|+++|.|++ +|+||++
T Consensus 69 ~~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVni 148 (604)
T 2et6_A 69 VADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNT 148 (604)
T ss_dssp EEECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 4699998889999999999999999999999998777777776 999999999999999999999999964 5899999
Q ss_pred eccccc------------------------------------c-------------------------------------
Q psy2266 92 ASKLGM------------------------------------L------------------------------------- 98 (313)
Q Consensus 92 sS~~~~------------------------------------~------------------------------------- 98 (313)
+|..+. +
T Consensus 149 sS~ag~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~~T~m~~~~~~~~~~~~~~pe~vA~~v~~L~s~~ 228 (604)
T 2et6_A 149 SSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPLARSRMTESIMPPPMLEKLGPEKVAPLVLYLSSAE 228 (604)
T ss_dssp CCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCHHHHTTSCHHHHTTCSHHHHHHHHHHHTSSS
T ss_pred CCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccCCcCccccccCChhhhccCCHHHHHHHHHHHhCCc
Confidence 998765 0
Q ss_pred -----------------------------cCC-----------------Cc----------------h------------
Q psy2266 99 -----------------------------YNV-----------------PS----------------Q------------ 104 (313)
Q Consensus 99 -----------------------------~~~-----------------~~----------------~------------ 104 (313)
.+. .. +
T Consensus 229 ~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~P~~~~d~~~l~~ka~~~~ 308 (604)
T 2et6_A 229 NELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDYDDSRKPEYLKNQYPFMLNDYATLTNEARKLP 308 (604)
T ss_dssp CCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCCCCTTSCGGGSCBCCSSSCCHHHHHHHHTTSC
T ss_pred ccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhchhhccccccccccCcchHHHHHHHHHHHHhCC
Confidence 000 00 0
Q ss_pred ----------hhh-h------------------------hh-c---------------------ccCCCH-HHHHHHHHH
Q psy2266 105 ----------ELR-Q------------------------TL-F---------------------NESLTE-DQLLDMMTD 126 (313)
Q Consensus 105 ----------~~~-~------------------------~~-~---------------------~d~~~~-~~~~~~~~~ 126 (313)
.+. . ++ . ....|. .+.+++++.
T Consensus 309 ~~~~~~~~~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~ 388 (604)
T 2et6_A 309 ANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKN 388 (604)
T ss_dssp CCCCTTCCCCCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHH
T ss_pred ccccccccccccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHH
Confidence 000 0 00 1 112355 666788899
Q ss_pred HHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccC--CCceEEecCCccccccccChhhh
Q psy2266 127 YVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRP--HARVVNVASKLGMLYNVPSQELR 200 (313)
Q Consensus 127 ~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~--~g~iv~vss~~~~~~~~~~~~~~ 200 (313)
+.++||++|+||||||+...+++ .++|+.+|++|++|+++++++++|+|++ +|+||++||.++...
T Consensus 389 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~-------- 460 (604)
T 2et6_A 389 VIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYG-------- 460 (604)
T ss_dssp HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC--------
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC--------
Confidence 99999999999999999877765 3789999999999999999999999954 489999999998652
Q ss_pred hhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 201 QTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
..+..+|++||+|+.+|++.|+.|+++. ||+||+|+||+ .|+|
T Consensus 461 --------------------------------~~~~~~Y~asKaal~~lt~~la~El~~~----gIrVn~v~PG~-~T~m 503 (604)
T 2et6_A 461 --------------------------------NFGQANYSSSKAGILGLSKTMAIEGAKN----NIKVNIVAPHA-ETAM 503 (604)
T ss_dssp --------------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECC-CCCC
T ss_pred --------------------------------CCCChhHHHHHHHHHHHHHHHHHHhCcc----CeEEEEEcCCC-CCcc
Confidence 2334569999999999999999999877 99999999995 9999
Q ss_pred cccc------CCCCcchhhhhhhhh
Q psy2266 281 TEHK------GVLTPEQGKIRQKIY 299 (313)
Q Consensus 281 ~~~~------~~~~~~~~~~~~~~~ 299 (313)
.... ....|++.+....++
T Consensus 504 ~~~~~~~~~~~~~~pe~vA~~v~~L 528 (604)
T 2et6_A 504 TLSIMREQDKNLYHADQVAPLLVYL 528 (604)
T ss_dssp ---------CCSSCGGGTHHHHHHT
T ss_pred ccccCchhhccCCCHHHHHHHHHHH
Confidence 7542 123466655554444
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-32 Score=250.86 Aligned_cols=169 Identities=18% Similarity=0.154 Sum_probs=130.0
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
.++++|+++..++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|++++|+++|++.|.
T Consensus 69 ~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~ 148 (273)
T 4fgs_A 69 AIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPL 148 (273)
T ss_dssp HHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTT
T ss_pred HHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3456788999999999999999999999999999999999999998888888887 999999988888888888877777
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|+++|+
T Consensus 149 m~~~G~-------------------------------------------------------------------------- 154 (273)
T 4fgs_A 149 LARGSS-------------------------------------------------------------------------- 154 (273)
T ss_dssp EEEEEE--------------------------------------------------------------------------
T ss_pred HhhCCe--------------------------------------------------------------------------
Confidence 655545
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
||++||..+.. +.+...+|++
T Consensus 155 -------------------IInisS~~~~~----------------------------------------~~~~~~~Y~a 175 (273)
T 4fgs_A 155 -------------------VVLTGSTAGST----------------------------------------GTPAFSVYAA 175 (273)
T ss_dssp -------------------EEEECCGGGGS----------------------------------------CCTTCHHHHH
T ss_pred -------------------EEEEeehhhcc----------------------------------------CCCCchHHHH
Confidence 45555555443 1223356999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcch----hhhhhhhhhcccCCccc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQ----GKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~----~~~~~~~~~l~r~~~~~ 308 (313)
||+|+..|+|.++.|++++ |||||+|+||+|+||+........+.. .+......|++|+|+..
T Consensus 176 sKaav~~ltr~lA~Ela~~----gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe 242 (273)
T 4fgs_A 176 SKAALRSFARNWILDLKDR----GIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAE 242 (273)
T ss_dssp HHHHHHHHHHHHHHHTTTS----CEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHhccc----CeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHH
Confidence 9999999999999998876 999999999999999977654333322 23445668999998753
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-31 Score=241.01 Aligned_cols=169 Identities=20% Similarity=0.165 Sum_probs=129.1
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+++.+.++.+++||++|+++++++++.+.++||+||+||||||+.....++...++|++++++|+.++++++|++.|.|+
T Consensus 50 ~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~ 129 (258)
T 4gkb_A 50 LAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLK 129 (258)
T ss_dssp HHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34567889999999999999999999999999999999999999876565544588888888888887777777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 130 ~------------------------------------------------------------------------------- 130 (258)
T 4gkb_A 130 A------------------------------------------------------------------------------- 130 (258)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
.+|+|||+||..+.. +.+...+|++||
T Consensus 131 -------------~~G~IVnisS~~~~~----------------------------------------~~~~~~~Y~asK 157 (258)
T 4gkb_A 131 -------------TRGAIVNISSKTAVT----------------------------------------GQGNTSGYCASK 157 (258)
T ss_dssp -------------HTCEEEEECCTHHHH----------------------------------------CCSSCHHHHHHH
T ss_pred -------------cCCeEEEEeehhhcc----------------------------------------CCCCchHHHHHH
Confidence 136666777766654 123345699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCC---CCcchhhhhhhhhhcc-cCCccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGV---LTPEQGKIRQKIYLLK-RTNKFQ 308 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~l~-r~~~~~ 308 (313)
+|+..|+|.++.|++++ |||||+|+||+|+|||.+.... .+++..+......|++ |+|+..
T Consensus 158 aav~~ltr~lA~ela~~----gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~pe 222 (258)
T 4gkb_A 158 GAQLALTREWAVALREH----GVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPD 222 (258)
T ss_dssp HHHHHHHHHHHHHHGGG----TCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHH
T ss_pred HHHHHHHHHHHHHhccc----CeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHH
Confidence 99999999999999987 9999999999999999876421 2233445556677885 888753
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=244.01 Aligned_cols=166 Identities=26% Similarity=0.312 Sum_probs=132.4
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
++++.|+++..++||++|+++++++++ +|+||+||||||+....++.+++ ++|++++++|+.++|+++|+++|.
T Consensus 50 ~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~ 124 (247)
T 4hp8_A 50 IIAKDGGNASALLIDFADPLAAKDSFT-----DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKE 124 (247)
T ss_dssp HHHHTTCCEEEEECCTTSTTTTTTSST-----TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHhCCcEEEEEccCCCHHHHHHHHH-----hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 456778899999999999998887663 69999999999999888887776 999999998888888888888887
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++.
T Consensus 125 m~~~---------------------------------------------------------------------------- 128 (247)
T 4hp8_A 125 LLAK---------------------------------------------------------------------------- 128 (247)
T ss_dssp HHHH----------------------------------------------------------------------------
T ss_pred HHHh----------------------------------------------------------------------------
Confidence 7431
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
.++|+|||+||..+.. +.+...+|++
T Consensus 129 --------------g~~G~IVnisS~~~~~----------------------------------------g~~~~~~Y~a 154 (247)
T 4hp8_A 129 --------------GRSGKVVNIASLLSFQ----------------------------------------GGIRVPSYTA 154 (247)
T ss_dssp --------------TCCEEEEEECCGGGTS----------------------------------------CCSSCHHHHH
T ss_pred --------------CCCcEEEEEechhhCC----------------------------------------CCCCChHHHH
Confidence 0135666666666654 1233456999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
||+|+.+|||.++.|++++ |||||+|+||+|+|||.+... ..++..+......|++|+|+..
T Consensus 155 sKaav~~ltr~lA~Ela~~----gIrVNaV~PG~i~T~~~~~~~-~~~~~~~~~~~~~PlgR~g~pe 216 (247)
T 4hp8_A 155 AKHGVAGLTKLLANEWAAK----GINVNAIAPGYIETNNTEALR-ADAARNKAILERIPAGRWGHSE 216 (247)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSGGGHHHH-TSHHHHHHHHTTCTTSSCBCTH
T ss_pred HHHHHHHHHHHHHHHHhhc----CeEEEEEeeCCCCCcchhhcc-cCHHHHHHHHhCCCCCCCcCHH
Confidence 9999999999999999987 999999999999999987642 2344445566788999999864
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=237.22 Aligned_cols=160 Identities=26% Similarity=0.325 Sum_probs=120.1
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
..+.++..++||++|+++++++++ +||+||+||||||+.. +.++++ ++|++++++|+.++|+++|++.|.|++
T Consensus 51 ~~~~~~~~~~~Dv~~~~~v~~~~~----~~g~iDiLVNNAGi~~--~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~ 124 (242)
T 4b79_A 51 PRHPRIRREELDITDSQRLQRLFE----ALPRLDVLVNNAGISR--DREEYDLATFERVLRLNLSAAMLASQLARPLLAQ 124 (242)
T ss_dssp CCCTTEEEEECCTTCHHHHHHHHH----HCSCCSEEEECCCCCC--GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hhcCCeEEEEecCCCHHHHHHHHH----hcCCCCEEEECCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 345678999999999999887764 6999999999999865 344555 788888877777777777776666543
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 125 -------------------------------------------------------------------------------- 124 (242)
T 4b79_A 125 -------------------------------------------------------------------------------- 124 (242)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
++|+|||+||..+.. +.....+|++||+
T Consensus 125 ------------~~G~IVnisS~~~~~----------------------------------------~~~~~~~Y~asKa 152 (242)
T 4b79_A 125 ------------RGGSILNIASMYSTF----------------------------------------GSADRPAYSASKG 152 (242)
T ss_dssp ------------HCEEEEEECCGGGTS----------------------------------------CCSSCHHHHHHHH
T ss_pred ------------cCCeEEEEeeccccC----------------------------------------CCCCCHHHHHHHH
Confidence 135666666666654 1233456999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
|+..|||.++.|++++ |||||+|+||+|+|||.+... ..++..+......|++|+|+..
T Consensus 153 av~~ltr~lA~Ela~~----gIrVNaV~PG~i~T~m~~~~~-~~~~~~~~~~~~~PlgR~g~pe 211 (242)
T 4b79_A 153 AIVQLTRSLACEYAAE----RIRVNAIAPGWIDTPLGAGLK-ADVEATRRIMQRTPLARWGEAP 211 (242)
T ss_dssp HHHHHHHHHHHHHGGG----TEEEEEEEECSBCCC-----C-CCHHHHHHHHHTCTTCSCBCHH
T ss_pred HHHHHHHHHHHHhhhc----CeEEEEEEeCCCCChhhhccc-CCHHHHHHHHhcCCCCCCcCHH
Confidence 9999999999999987 999999999999999987642 3445556667788999999753
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-30 Score=234.04 Aligned_cols=159 Identities=18% Similarity=0.207 Sum_probs=126.3
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++..++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|+.++|+++|++.|.|++
T Consensus 44 ~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~ 123 (247)
T 3ged_A 44 KERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIK 123 (247)
T ss_dssp TTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 4466789999999999999999999999999999999999998888887776 889999988888888888877776643
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 124 -------------------------------------------------------------------------------- 123 (247)
T 3ged_A 124 -------------------------------------------------------------------------------- 123 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.+|+||++||..+.. +.+...+|++||+
T Consensus 124 ------------~~G~IInisS~~~~~----------------------------------------~~~~~~~Y~asKa 151 (247)
T 3ged_A 124 ------------NKGRIINIASTRAFQ----------------------------------------SEPDSEAYASAKG 151 (247)
T ss_dssp ------------TTCEEEEECCGGGTS----------------------------------------CCTTCHHHHHHHH
T ss_pred ------------cCCcEEEEeeccccc----------------------------------------CCCCCHHHHHHHH
Confidence 135666666666654 1233456999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
|+..|||.++.|++ + |||||+|+||+|+|++.+.. .+......|++|+|+..
T Consensus 152 al~~ltk~lA~ela----~-~IrVN~I~PG~i~t~~~~~~-------~~~~~~~~Pl~R~g~pe 203 (247)
T 3ged_A 152 GIVALTHALAMSLG----P-DVLVNCIAPGWINVTEQQEF-------TQEDCAAIPAGKVGTPK 203 (247)
T ss_dssp HHHHHHHHHHHHHT----T-TSEEEEEEECSBCCCC---C-------CHHHHHTSTTSSCBCHH
T ss_pred HHHHHHHHHHHHHC----C-CCEEEEEecCcCCCCCcHHH-------HHHHHhcCCCCCCcCHH
Confidence 99999999999986 3 79999999999999986542 22334567999988753
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=225.07 Aligned_cols=163 Identities=16% Similarity=0.076 Sum_probs=128.8
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC----CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT----APGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~----~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
+.++.+++||++|+++++++++.+.++||+||+||||||+.... .+.+.+ ++|+..+++|+++++.+++++.+.|
T Consensus 57 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~ 136 (256)
T 4fs3_A 57 QPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLM 136 (256)
T ss_dssp CSSCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTC
T ss_pred CCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999999987543 233444 8899999888888888888777766
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
+++|+||+++|
T Consensus 137 ~~~G~IVnisS--------------------------------------------------------------------- 147 (256)
T 4fs3_A 137 PEGGSIVATTY--------------------------------------------------------------------- 147 (256)
T ss_dssp TTCEEEEEEEC---------------------------------------------------------------------
T ss_pred ccCCEEEEEec---------------------------------------------------------------------
Confidence 65555555554
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
..+.. +.++..+|++|
T Consensus 148 ------------------------~~~~~----------------------------------------~~~~~~~Y~as 163 (256)
T 4fs3_A 148 ------------------------LGGEF----------------------------------------AVQNYNVMGVA 163 (256)
T ss_dssp ------------------------GGGTS----------------------------------------CCTTTHHHHHH
T ss_pred ------------------------ccccc----------------------------------------CcccchhhHHH
Confidence 44433 12233569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
|+|+..|+|.|+.|++++ |||||+|+||+|+|++.+... ..++..+......|++|+|+..
T Consensus 164 Kaal~~ltr~lA~Ela~~----gIrVN~V~PG~i~T~~~~~~~-~~~~~~~~~~~~~Pl~R~g~pe 224 (256)
T 4fs3_A 164 KASLEANVKYLALDLGPD----NIRVNAISAGPIRTLSAKGVG-GFNTILKEIKERAPLKRNVDQV 224 (256)
T ss_dssp HHHHHHHHHHHHHHHGGG----TEEEEEEEECCCCSGGGTTCT-THHHHHHHHHHHSTTSSCCCHH
T ss_pred HHHHHHHHHHHHHHhCcc----CeEEEEEecCCCCChhhhhcc-CCHHHHHHHHhcCCCCCCcCHH
Confidence 999999999999999887 999999999999999987642 2344456667788999998753
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=230.96 Aligned_cols=166 Identities=20% Similarity=0.179 Sum_probs=126.0
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD--TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~--~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+...++||++++++++++++.+.++||+||+||||||+... .++.+++ ++|++++++|++++++++|+++|.|++
T Consensus 50 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~- 128 (261)
T 4h15_A 50 PEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVA- 128 (261)
T ss_dssp CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhh-
Confidence 345678999999999999999999999999999999998653 3566665 888888888888888888877777754
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 129 -------------------------------------------------------------------------------- 128 (261)
T 4h15_A 129 -------------------------------------------------------------------------------- 128 (261)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+++|+||++||..+.... ......|++||+|
T Consensus 129 ----------~~~G~Iv~isS~~~~~~~---------------------------------------~~~~~~Y~asKaa 159 (261)
T 4h15_A 129 ----------RGSGVVVHVTSIQRVLPL---------------------------------------PESTTAYAAAKAA 159 (261)
T ss_dssp ----------HTCEEEEEECCGGGTSCC---------------------------------------TTTCHHHHHHHHH
T ss_pred ----------cCCceEEEEEehhhccCC---------------------------------------CCccHHHHHHHHH
Confidence 123667777776665411 1123459999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccC-------CCCcch----hhhhhhhhhcccCCccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG-------VLTPEQ----GKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~-------~~~~~~----~~~~~~~~~l~r~~~~~ 308 (313)
+..|+|.++.|++++ |||||+|+||+|+||+..... ....+. ........|++|+|+..
T Consensus 160 l~~lt~~lA~Ela~~----gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe 229 (261)
T 4h15_A 160 LSTYSKAMSKEVSPK----GVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPE 229 (261)
T ss_dssp HHHHHHHHHHHHGGG----TEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHH
T ss_pred HHHHHHHHHHHhhhh----CeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHH
Confidence 999999999999987 999999999999999875421 112111 12234457999998753
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=208.80 Aligned_cols=165 Identities=24% Similarity=0.316 Sum_probs=129.9
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.+++||++|.++++++++.+.+++|++|+||||||+....++.+++ ++|++.+++|+.+++.++|++.|.|+
T Consensus 50 ~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 129 (246)
T 3osu_A 50 KAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQML 129 (246)
T ss_dssp HHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 44577889999999999999999999999999999999999998777666665 88888888888888777777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 130 ~------------------------------------------------------------------------------- 130 (246)
T 3osu_A 130 R------------------------------------------------------------------------------- 130 (246)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred H-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++.|+||++||..+... ..+..+|++||
T Consensus 131 ------------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK 158 (246)
T 3osu_A 131 ------------QRSGAIINLSSVVGAVG----------------------------------------NPGQANYVATK 158 (246)
T ss_dssp ------------HTCEEEEEECCHHHHHC----------------------------------------CTTCHHHHHHH
T ss_pred ------------cCCCEEEEEcchhhcCC----------------------------------------CCCChHHHHHH
Confidence 12356666666665441 22345699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+|+..|++.++.+++++ ||+||+|+||+|+|++.+.. .++..+......|++|+++.
T Consensus 159 ~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~~r~~~~ 215 (246)
T 3osu_A 159 AGVIGLTKSAARELASR----GITVNAVAPGFIVSDMTDAL---SDELKEQMLTQIPLARFGQD 215 (246)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECSBGGGCCSCS---CHHHHHHHHTTCTTCSCBCH
T ss_pred HHHHHHHHHHHHHhccc----CeEEEEEEECCCcCCccccc---CHHHHHHHHhcCCCCCCcCH
Confidence 99999999999999877 99999999999999997653 34444445556678877654
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=210.35 Aligned_cols=166 Identities=22% Similarity=0.222 Sum_probs=129.4
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
+++.+.++.+++||++|.++++++++.+.+++|++|+||||||+....++ +.+ ++|++++++|+.+++.++|++.|.|
T Consensus 56 ~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 134 (256)
T 3gaf_A 56 IRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHM 134 (256)
T ss_dssp HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34557889999999999999999999999999999999999999876666 444 8888888888888877777777766
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++.
T Consensus 135 ~~~----------------------------------------------------------------------------- 137 (256)
T 3gaf_A 135 QKA----------------------------------------------------------------------------- 137 (256)
T ss_dssp HHT-----------------------------------------------------------------------------
T ss_pred Hhc-----------------------------------------------------------------------------
Confidence 431
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
++|+||++||..+... ..+..+|++|
T Consensus 138 --------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~as 163 (256)
T 3gaf_A 138 --------------GGGAILNISSMAGENT----------------------------------------NVRMASYGSS 163 (256)
T ss_dssp --------------TCEEEEEECCGGGTCC----------------------------------------CTTCHHHHHH
T ss_pred --------------CCcEEEEEcCHHHcCC----------------------------------------CCCchHHHHH
Confidence 1256666666666541 2234569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+|+..|++.++.+++++ ||+||+|+||+|+|++.+.. ..++.........|++|+++.
T Consensus 164 Kaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~p~~r~~~~ 222 (256)
T 3gaf_A 164 KAAVNHLTRNIAFDVGPM----GIRVNAIAPGAIKTDALATV--LTPEIERAMLKHTPLGRLGEA 222 (256)
T ss_dssp HHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCHHHHHH--CCHHHHHHHHTTCTTSSCBCH
T ss_pred HHHHHHHHHHHHHHHhhh----CcEEEEEEEccccCchhhhc--cCHHHHHHHHhcCCCCCCCCH
Confidence 999999999999999877 99999999999999997654 234444445556677777654
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-26 Score=209.64 Aligned_cols=167 Identities=20% Similarity=0.155 Sum_probs=129.2
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.+++||++|+++++++++.+.+++|+||+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|+
T Consensus 50 ~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~ 129 (258)
T 3oid_A 50 EKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLME 129 (258)
T ss_dssp HTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45577899999999999999999999999999999999999988766666665 88888888888888888887777775
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 130 ~~------------------------------------------------------------------------------ 131 (258)
T 3oid_A 130 KN------------------------------------------------------------------------------ 131 (258)
T ss_dssp TT------------------------------------------------------------------------------
T ss_pred hc------------------------------------------------------------------------------
Confidence 41
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++|+||++||..+... ..+..+|++||
T Consensus 132 -------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 158 (258)
T 3oid_A 132 -------------GGGHIVSISSLGSIRY----------------------------------------LENYTTVGVSK 158 (258)
T ss_dssp -------------TCEEEEEEEEGGGTSB----------------------------------------CTTCHHHHHHH
T ss_pred -------------CCcEEEEECchhhCCC----------------------------------------CCCcHHHHHHH
Confidence 1245555555555431 22335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+|+..|++.++.++++. ||+||+|+||+|+|++.+... ..++..+......|++|+++.
T Consensus 159 aa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~~r~~~~ 217 (258)
T 3oid_A 159 AALEALTRYLAVELSPK----QIIVNAVSGGAIDTDALKHFP-NREDLLEDARQNTPAGRMVEI 217 (258)
T ss_dssp HHHHHHHHHHHHHTGGG----TEEEEEEEECCBCSGGGGGCT-THHHHHHHHHHHCTTSSCBCH
T ss_pred HHHHHHHHHHHHHHhhc----CcEEEEEeeCCCcChhhhhcc-cCHHHHHHHHhcCCCCCCcCH
Confidence 99999999999998876 999999999999999987642 112233444556788887654
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.94 E-value=9.1e-27 Score=210.87 Aligned_cols=163 Identities=24% Similarity=0.351 Sum_probs=126.2
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.+...++||++|+++++++++.+.+++|++|+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|++
T Consensus 53 ~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~- 131 (248)
T 3op4_A 53 LGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMK- 131 (248)
T ss_dssp HGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-
T ss_pred hcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-
Confidence 344577899999999999999999999999999999999998877666665 888888888888877777777776643
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 132 -------------------------------------------------------------------------------- 131 (248)
T 3op4_A 132 -------------------------------------------------------------------------------- 131 (248)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
++.|+||++||..+.. +..+..+|++||+|
T Consensus 132 ----------~~~g~iv~isS~~~~~----------------------------------------~~~~~~~Y~asK~a 161 (248)
T 3op4_A 132 ----------KRQGRIINVGSVVGTM----------------------------------------GNAGQANYAAAKAG 161 (248)
T ss_dssp ----------HTCEEEEEECCHHHHH----------------------------------------CCTTCHHHHHHHHH
T ss_pred ----------cCCCEEEEEcchhhcC----------------------------------------CCCCChHHHHHHHH
Confidence 1235666666666544 12334569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+..|++.++.+++++ ||+||+|+||+|+|++.+.. .++.........|++|+++.
T Consensus 162 ~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~p~~r~~~p 216 (248)
T 3op4_A 162 VIGFTKSMAREVASR----GVTVNTVAPGFIETDMTKAL---NDEQRTATLAQVPAGRLGDP 216 (248)
T ss_dssp HHHHHHHHHHHHGGG----TEEEEEEEECSBSSTTTTTS---CHHHHHHHHHTCTTCSCBCH
T ss_pred HHHHHHHHHHHHHHh----CeEEEEEeeCCCCCchhhhc---CHHHHHHHHhcCCCCCCcCH
Confidence 999999999999877 99999999999999997653 33444444455677776543
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.8e-26 Score=207.66 Aligned_cols=170 Identities=16% Similarity=0.147 Sum_probs=128.8
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
+++.+.++.+++||++|+++++++++.+.+++|++|+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|
T Consensus 50 ~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~ 129 (257)
T 3imf_A 50 IEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYW 129 (257)
T ss_dssp HCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 345677899999999999999999999999999999999999998777666666 8888888888888888888777766
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++.
T Consensus 130 ~~~----------------------------------------------------------------------------- 132 (257)
T 3imf_A 130 IEK----------------------------------------------------------------------------- 132 (257)
T ss_dssp HHH-----------------------------------------------------------------------------
T ss_pred Hhh-----------------------------------------------------------------------------
Confidence 220
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
...|+||++||..+... ..+..+|++|
T Consensus 133 -------------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~as 159 (257)
T 3imf_A 133 -------------GIKGNIINMVATYAWDA----------------------------------------GPGVIHSAAA 159 (257)
T ss_dssp -------------TCCCEEEEECCGGGGSC----------------------------------------CTTCHHHHHH
T ss_pred -------------CCCcEEEEECchhhccC----------------------------------------CCCcHHHHHH
Confidence 11366777777666541 2334569999
Q ss_pred HHHHHHHHHHHHhhhc-cCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 243 KLGVAKLSFIQHATLS-KDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 243 K~al~~l~~~~~~~l~-~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+|+..|++.++.+++ +. ||+||+|+||+|+|++.....+..++..+......|++|+++.
T Consensus 160 Kaa~~~l~~~la~e~~~~~----gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 221 (257)
T 3imf_A 160 KAGVLAMTKTLAVEWGRKY----GIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTP 221 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHH----CCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCH
T ss_pred HHHHHHHHHHHHHHhcccc----CeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCH
Confidence 9999999999999987 55 9999999999999998655333334444445556677777654
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.6e-26 Score=209.23 Aligned_cols=168 Identities=21% Similarity=0.167 Sum_probs=129.3
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
+++.+.++.+++||++|.++++++++.+.+++|+||+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|
T Consensus 63 ~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 142 (270)
T 3is3_A 63 IKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHL 142 (270)
T ss_dssp HHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred HHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 345678899999999999999999999999999999999999998777777766 9999999988888888888887777
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
+++|+||+++|
T Consensus 143 ~~~g~iv~isS--------------------------------------------------------------------- 153 (270)
T 3is3_A 143 TEGGRIVLTSS--------------------------------------------------------------------- 153 (270)
T ss_dssp CTTCEEEEECC---------------------------------------------------------------------
T ss_pred hcCCeEEEEeC---------------------------------------------------------------------
Confidence 66555555555
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
..+... +..+..+|++|
T Consensus 154 ------------------------~~~~~~---------------------------------------~~~~~~~Y~as 170 (270)
T 3is3_A 154 ------------------------NTSKDF---------------------------------------SVPKHSLYSGS 170 (270)
T ss_dssp ------------------------TTTTTC---------------------------------------CCTTCHHHHHH
T ss_pred ------------------------chhccC---------------------------------------CCCCCchhHHH
Confidence 432110 11233469999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccC---------CCCcchhhhhhhhhhcccCCcc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG---------VLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+|+..|++.++.++++. ||+||+|+||+|+|++.+... ...++..+......|++|+++.
T Consensus 171 Kaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 240 (270)
T 3is3_A 171 KGAVDSFVRIFSKDCGDK----KITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWP 240 (270)
T ss_dssp HHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCH
T ss_pred HHHHHHHHHHHHHHhccc----CeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCH
Confidence 999999999999999876 999999999999999975311 0111222333445688887764
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-26 Score=210.10 Aligned_cols=164 Identities=26% Similarity=0.278 Sum_probs=122.2
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+..+.++.+++||++|+++++++++.+.+++|+||+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|+
T Consensus 73 ~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 152 (267)
T 3u5t_A 73 EAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLR 152 (267)
T ss_dssp HHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred HhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45577899999999999999999999999999999999999998777776666 99999999888888888888777765
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
++|+
T Consensus 153 ~~g~---------------------------------------------------------------------------- 156 (267)
T 3u5t_A 153 VGGR---------------------------------------------------------------------------- 156 (267)
T ss_dssp EEEE----------------------------------------------------------------------------
T ss_pred hCCe----------------------------------------------------------------------------
Confidence 5444
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
||++||..+.. +..+..+|++||
T Consensus 157 -----------------iv~isS~~~~~----------------------------------------~~~~~~~Y~asK 179 (267)
T 3u5t_A 157 -----------------IINMSTSQVGL----------------------------------------LHPSYGIYAAAK 179 (267)
T ss_dssp -----------------EEEECCTHHHH----------------------------------------CCTTCHHHHHHH
T ss_pred -----------------EEEEeChhhcc----------------------------------------CCCCchHHHHHH
Confidence 55555544433 122335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+|+..|++.++.++++. ||+||+|+||+|+|++.... ..++..+......|++|+++.
T Consensus 180 aa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~p~~r~~~p 237 (267)
T 3u5t_A 180 AGVEAMTHVLSKELRGR----DITVNAVAPGPTATDLFLEG--KSDEVRDRFAKLAPLERLGTP 237 (267)
T ss_dssp HHHHHHHHHHHHHTTTS----CCEEEEEEECCBC-------------CHHHHHTSSTTCSCBCH
T ss_pred HHHHHHHHHHHHHhhhh----CCEEEEEEECCCcCcccccc--CCHHHHHHHHhcCCCCCCcCH
Confidence 99999999999988766 99999999999999997552 222333444555677776654
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.7e-26 Score=206.78 Aligned_cols=162 Identities=19% Similarity=0.157 Sum_probs=126.9
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.++.+++||++|+++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 60 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~--- 136 (262)
T 3pk0_A 60 GKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIA--- 136 (262)
T ss_dssp SCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---
Confidence 6789999999999999999999999999999999999998877777766 888888888888888777777776643
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 137 -------------------------------------------------------------------------------- 136 (262)
T 3pk0_A 137 -------------------------------------------------------------------------------- 136 (262)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
++.|+||++||..+... +..+..+|++||+|+.
T Consensus 137 --------~~~g~iv~isS~~~~~~---------------------------------------~~~~~~~Y~asK~a~~ 169 (262)
T 3pk0_A 137 --------SGSGRVVLTSSITGPIT---------------------------------------GYPGWSHYGATKAAQL 169 (262)
T ss_dssp --------HSSCEEEEECCSBTTTB---------------------------------------CCTTCHHHHHHHHHHH
T ss_pred --------cCCcEEEEEechhhccC---------------------------------------CCCCChhhHHHHHHHH
Confidence 12366677777665421 1223356999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
.|++.++.+++++ ||+||+|+||+|+|++.... .++..+......|++|+++.
T Consensus 170 ~l~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~~r~~~p 222 (262)
T 3pk0_A 170 GFMRTAAIELAPH----KITVNAIMPGNIMTEGLLEN---GEEYIASMARSIPAGALGTP 222 (262)
T ss_dssp HHHHHHHHHHGGG----TCEEEEEEECSBCCHHHHTT---CHHHHHHHHTTSTTSSCBCH
T ss_pred HHHHHHHHHHHhh----CcEEEEEEeCcCcCcccccc---CHHHHHHHHhcCCCCCCcCH
Confidence 9999999999877 99999999999999986642 33444445556677776653
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-26 Score=210.38 Aligned_cols=165 Identities=25% Similarity=0.339 Sum_probs=124.1
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.+++||++|+++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|+++|.|+
T Consensus 69 ~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 148 (266)
T 3grp_A 69 ADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMM 148 (266)
T ss_dssp HHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34577899999999999999999999999999999999999998777666666 88888888888888777777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 149 ~------------------------------------------------------------------------------- 149 (266)
T 3grp_A 149 R------------------------------------------------------------------------------- 149 (266)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred H-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++.|+||++||..+... ..+..+|++||
T Consensus 150 ------------~~~g~Iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 177 (266)
T 3grp_A 150 ------------RRYGRIINITSIVGVVG----------------------------------------NPGQTNYCAAK 177 (266)
T ss_dssp ------------HTCEEEEEECCC-----------------------------------------------CHHHHHHHH
T ss_pred ------------cCCcEEEEECCHHHcCC----------------------------------------CCCchhHHHHH
Confidence 12356666666666441 12334699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+|+..|++.++.+++++ ||+||+|+||+|+|++.+.. .++..+......|++|++..
T Consensus 178 aa~~~~~~~la~e~~~~----gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~~r~~~~ 234 (266)
T 3grp_A 178 AGLIGFSKALAQEIASR----NITVNCIAPGFIKSAMTDKL---NEKQKEAIMAMIPMKRMGIG 234 (266)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSHHHHTC---CHHHHHHHHTTCTTCSCBCH
T ss_pred HHHHHHHHHHHHHhhhh----CcEEEEEeeCcCCCchhhcc---CHHHHHHHHhcCCCCCCcCH
Confidence 99999999999999877 99999999999999997763 34444555566788887754
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.9e-26 Score=206.44 Aligned_cols=139 Identities=21% Similarity=0.236 Sum_probs=115.7
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.+++||++|+++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++.
T Consensus 60 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--- 136 (265)
T 3lf2_A 60 RLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR--- 136 (265)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS---
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---
Confidence 488999999999999999999999999999999999998777777766 8899999888888888888888877551
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 137 -------------------------------------------------------------------------------- 136 (265)
T 3lf2_A 137 -------------------------------------------------------------------------------- 136 (265)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
++|+||++||..+.. +..+..+|++||+|+..
T Consensus 137 --------~~g~iv~isS~~~~~----------------------------------------~~~~~~~Y~asKaa~~~ 168 (265)
T 3lf2_A 137 --------ADAAIVCVNSLLASQ----------------------------------------PEPHMVATSAARAGVKN 168 (265)
T ss_dssp --------TTEEEEEEEEGGGTS----------------------------------------CCTTBHHHHHHHHHHHH
T ss_pred --------CCeEEEEECCcccCC----------------------------------------CCCCchhhHHHHHHHHH
Confidence 125555666655543 12233569999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|++.++.+++++ ||+||+|+||+|+|++.+.
T Consensus 169 l~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~ 199 (265)
T 3lf2_A 169 LVRSMAFEFAPK----GVRVNGILIGLVESGQWRR 199 (265)
T ss_dssp HHHHHHHHHGGG----TEEEEEEEECSBCCHHHHH
T ss_pred HHHHHHHHhccc----CeEEEEEEeCcCcCchhhh
Confidence 999999999877 9999999999999998765
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.6e-26 Score=209.99 Aligned_cols=167 Identities=23% Similarity=0.230 Sum_probs=129.2
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.+++||++|+++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.++|++.|.|+
T Consensus 71 ~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 150 (271)
T 4ibo_A 71 RNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMI 150 (271)
T ss_dssp HHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 44577889999999999999999999999999999999999998777666665 88888888887777777777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 151 ~------------------------------------------------------------------------------- 151 (271)
T 4ibo_A 151 P------------------------------------------------------------------------------- 151 (271)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++.|+||++||..+... ..+...|++||
T Consensus 152 ------------~~~g~iV~isS~~~~~~----------------------------------------~~~~~~Y~asK 179 (271)
T 4ibo_A 152 ------------RGYGKIVNIGSLTSELA----------------------------------------RATVAPYTVAK 179 (271)
T ss_dssp ------------HTCEEEEEECCGGGTSB----------------------------------------CTTCHHHHHHH
T ss_pred ------------cCCcEEEEEccHHhCCC----------------------------------------CCCchhHHHHH
Confidence 12256666666666441 22345699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+|+..|++.++.+++++ ||+||+|+||+|+|++.+... ..++..+......|++|+++.
T Consensus 180 aa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~~r~~~p 238 (271)
T 4ibo_A 180 GGIKMLTRAMAAEWAQY----GIQANAIGPGYMLTDMNQALI-DNPEFDAWVKARTPAKRWGKP 238 (271)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSGGGHHHH-HCHHHHHHHHHHSTTCSCBCG
T ss_pred HHHHHHHHHHHHHHhhh----CeEEEEEEeccEeCcchhhcc-cCHHHHHHHHhcCCCCCCcCH
Confidence 99999999999999877 999999999999999976531 122333444556778887764
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-26 Score=208.67 Aligned_cols=164 Identities=18% Similarity=0.192 Sum_probs=116.8
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.+++||++|+++++++++.+.+++|+||+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|+
T Consensus 59 ~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 138 (262)
T 3ksu_A 59 EDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN 138 (262)
T ss_dssp HTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc
Confidence 34577899999999999999999999999999999999999998877776666 99999998888888888888777765
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
++|+
T Consensus 139 ~~g~---------------------------------------------------------------------------- 142 (262)
T 3ksu_A 139 PNGH---------------------------------------------------------------------------- 142 (262)
T ss_dssp EEEE----------------------------------------------------------------------------
T ss_pred CCCE----------------------------------------------------------------------------
Confidence 4444
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
||++||..+... ..+..+|++||
T Consensus 143 -----------------iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 165 (262)
T 3ksu_A 143 -----------------IITIATSLLAAY----------------------------------------TGFYSTYAGNK 165 (262)
T ss_dssp -----------------EEEECCCHHHHH----------------------------------------HCCCCC-----
T ss_pred -----------------EEEEechhhccC----------------------------------------CCCCchhHHHH
Confidence 555555444321 12235699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+|+..|++.++.+++++ ||+||+|+||+|+|++.... ..++..+......|++|+++.
T Consensus 166 aa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~r~~~p 223 (262)
T 3ksu_A 166 APVEHYTRAASKELMKQ----QISVNAIAPGPMDTSFFYGQ--ETKESTAFHKSQAMGNQLTKI 223 (262)
T ss_dssp CHHHHHHHHHHHHTTTT----TCEEEEEEECCCCTHHHHTC--C------------CCCCSCCG
T ss_pred HHHHHHHHHHHHHHHHc----CcEEEEEeeCCCcCcccccc--CchHHHHHHHhcCcccCCCCH
Confidence 99999999999988766 99999999999999997653 122222333344566665543
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-26 Score=206.96 Aligned_cols=165 Identities=23% Similarity=0.236 Sum_probs=125.9
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.+++||++|+++++++++.+.+++|++|+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|++
T Consensus 49 ~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 128 (247)
T 3rwb_A 49 SIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRA 128 (247)
T ss_dssp HHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 4467888999999999999999999999999999999999998776666665 888888888888887777777776643
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 129 ~------------------------------------------------------------------------------- 129 (247)
T 3rwb_A 129 A------------------------------------------------------------------------------- 129 (247)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.+.|+||++||..+.. +..+..+|++||+
T Consensus 130 -----------~~~g~iv~isS~~~~~----------------------------------------~~~~~~~Y~asKa 158 (247)
T 3rwb_A 130 -----------GKAGRVISIASNTFFA----------------------------------------GTPNMAAYVAAKG 158 (247)
T ss_dssp -----------TCCEEEEEECCTHHHH----------------------------------------TCTTCHHHHHHHH
T ss_pred -----------CCCcEEEEECchhhcc----------------------------------------CCCCchhhHHHHH
Confidence 0125677777766654 1233456999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhh-hhhhhcccCCcc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIR-QKIYLLKRTNKF 307 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~~l~r~~~~ 307 (313)
|+..|++.++.++++. ||+||+|+||+|+|++.+.. .+...... ....|++|.++.
T Consensus 159 a~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~r~~~p 215 (247)
T 3rwb_A 159 GVIGFTRALATELGKY----NITANAVTPGLIESDGVKAS---PHNEAFGFVEMLQAMKGKGQP 215 (247)
T ss_dssp HHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHTS---GGGGGHHHHHHHSSSCSCBCH
T ss_pred HHHHHHHHHHHHhhhc----CeEEEEEeeCcCcCcccccc---ChhHHHHHHhcccccCCCcCH
Confidence 9999999999999876 99999999999999987653 22222222 222567776653
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.7e-26 Score=209.13 Aligned_cols=164 Identities=25% Similarity=0.346 Sum_probs=126.8
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++..+.||++|.++++++++.+.+++|+||+||||||+.....+.+.+ ++|++++++|+.+++.++|++.|.|+
T Consensus 73 ~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 152 (270)
T 3ftp_A 73 KQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMM 152 (270)
T ss_dssp HHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34467788999999999999999999999999999999999998777666665 88888888888888877777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 153 ~------------------------------------------------------------------------------- 153 (270)
T 3ftp_A 153 K------------------------------------------------------------------------------- 153 (270)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred H-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+++|+||++||..+.. +..+..+|++||
T Consensus 154 ------------~~~g~iv~isS~~~~~----------------------------------------~~~~~~~Y~asK 181 (270)
T 3ftp_A 154 ------------ARGGRIVNITSVVGSA----------------------------------------GNPGQVNYAAAK 181 (270)
T ss_dssp ------------HTCEEEEEECCHHHHH----------------------------------------CCTTBHHHHHHH
T ss_pred ------------cCCCEEEEECchhhCC----------------------------------------CCCCchhHHHHH
Confidence 1235666666666544 122345699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
+|+..|++.++.+++++ ||+||+|+||+|+|++.+.. .++.........|++|++.
T Consensus 182 aa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~p~~r~~~ 237 (270)
T 3ftp_A 182 AGVAGMTRALAREIGSR----GITVNCVAPGFIDTDMTKGL---PQEQQTALKTQIPLGRLGS 237 (270)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSHHHHHS---CHHHHHHHHTTCTTCSCBC
T ss_pred HHHHHHHHHHHHHHhhh----CeEEEEEEeCCCcCcchhhc---CHHHHHHHHhcCCCCCCCC
Confidence 99999999999999877 99999999999999997653 3333333444556666554
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-25 Score=204.14 Aligned_cols=163 Identities=23% Similarity=0.239 Sum_probs=128.8
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.+++||++|+++++++++.+.+++|+||+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|+
T Consensus 77 ~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~ 156 (271)
T 3v2g_A 77 EQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLG 156 (271)
T ss_dssp HHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC
T ss_pred HhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 45578899999999999999999999999999999999999998877777766 99999999999999888888888776
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
++|+||+++|
T Consensus 157 ~~g~iv~isS---------------------------------------------------------------------- 166 (271)
T 3v2g_A 157 DGGRIITIGS---------------------------------------------------------------------- 166 (271)
T ss_dssp TTCEEEEECC----------------------------------------------------------------------
T ss_pred cCCEEEEEeC----------------------------------------------------------------------
Confidence 6555555554
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
..+.... ..+..+|++||
T Consensus 167 -----------------------~~~~~~~---------------------------------------~~~~~~Y~asK 184 (271)
T 3v2g_A 167 -----------------------NLAELVP---------------------------------------WPGISLYSASK 184 (271)
T ss_dssp -----------------------GGGTCCC---------------------------------------STTCHHHHHHH
T ss_pred -----------------------hhhccCC---------------------------------------CCCchHHHHHH
Confidence 3332210 12334699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+|+..|++.++.++++. ||+||+|+||+|+|++.... ++..+......|++|+++.
T Consensus 185 aa~~~l~~~la~e~~~~----gIrvn~v~PG~v~T~~~~~~----~~~~~~~~~~~~~~r~~~p 240 (271)
T 3v2g_A 185 AALAGLTKGLARDLGPR----GITVNIVHPGSTDTDMNPAD----GDHAEAQRERIATGSYGEP 240 (271)
T ss_dssp HHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSSSSCSS----CSSHHHHHHTCTTSSCBCH
T ss_pred HHHHHHHHHHHHHhhhh----CeEEEEEecCCCcCCccccc----chhHHHHHhcCCCCCCCCH
Confidence 99999999999999877 99999999999999997642 2223334455677776653
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-25 Score=206.12 Aligned_cols=147 Identities=22% Similarity=0.275 Sum_probs=116.7
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
++.+.++.+++||++|+++++++++.+.+++|+||+||||||+... .++.+++ ++|++++++|+.+++.++|++.|.|
T Consensus 73 ~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 152 (283)
T 3v8b_A 73 VGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYL 152 (283)
T ss_dssp TTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4457789999999999999999999999999999999999999754 5666665 8888888888888887777777766
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++
T Consensus 153 ~~------------------------------------------------------------------------------ 154 (283)
T 3v8b_A 153 KQ------------------------------------------------------------------------------ 154 (283)
T ss_dssp HH------------------------------------------------------------------------------
T ss_pred HH------------------------------------------------------------------------------
Confidence 44
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
+++|+||++||..+.... +..+..+|++|
T Consensus 155 -------------~~~g~Iv~isS~~~~~~~--------------------------------------~~~~~~~Y~as 183 (283)
T 3v8b_A 155 -------------RGGGAIVVVSSINGTRTF--------------------------------------TTPGATAYTAT 183 (283)
T ss_dssp -------------HTCEEEEEECCSBTTTBC--------------------------------------CSTTCHHHHHH
T ss_pred -------------cCCceEEEEcChhhccCC--------------------------------------CCCCchHHHHH
Confidence 112566666666554310 11233569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
|+|+..|++.++.+++++ ||+||+|+||+|+|++....
T Consensus 184 Kaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~ 221 (283)
T 3v8b_A 184 KAAQVAIVQQLALELGKH----HIRVNAVCPGAIETNISDNT 221 (283)
T ss_dssp HHHHHHHHHHHHHHTTTT----TEEEEEEEECSBSSCTTCCT
T ss_pred HHHHHHHHHHHHHHhCcc----CcEEEEEEeCCCcCCccccc
Confidence 999999999999988766 99999999999999997653
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-26 Score=210.10 Aligned_cols=166 Identities=14% Similarity=0.123 Sum_probs=127.8
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.+++||++|+++++++++.+.+++|+||+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|++
T Consensus 75 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~- 153 (277)
T 4fc7_A 75 TGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFR- 153 (277)
T ss_dssp HSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHH-
T ss_pred cCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-
Confidence 467899999999999999999999999999999999999988766666665 888888877777777777777766533
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 154 -------------------------------------------------------------------------------- 153 (277)
T 4fc7_A 154 -------------------------------------------------------------------------------- 153 (277)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+++|+||++||..+... ..+...|++||+|
T Consensus 154 ----------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asKaa 183 (277)
T 4fc7_A 154 ----------DHGGVIVNITATLGNRG----------------------------------------QALQVHAGSAKAA 183 (277)
T ss_dssp ----------HHCEEEEEECCSHHHHT----------------------------------------CTTCHHHHHHHHH
T ss_pred ----------cCCCEEEEECchhhCCC----------------------------------------CCCcHHHHHHHHH
Confidence 12366777777666541 2234569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+..|++.++.+++++ ||+||+|+||+|.|++........++.........|++|+++.
T Consensus 184 ~~~l~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 241 (277)
T 4fc7_A 184 VDAMTRHLAVEWGPQ----NIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNK 241 (277)
T ss_dssp HHHHHHHHHHHHGGG----TEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCH
T ss_pred HHHHHHHHHHHhhhc----CeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCH
Confidence 999999999999877 9999999999999986433212233444445566788887754
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.4e-26 Score=208.20 Aligned_cols=141 Identities=18% Similarity=0.232 Sum_probs=116.1
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++..++||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 70 ~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 149 (277)
T 4dqx_A 70 EIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRR 149 (277)
T ss_dssp HHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred HhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999999999999998776666665 888888888888888877777777654
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 150 ~------------------------------------------------------------------------------- 150 (277)
T 4dqx_A 150 N------------------------------------------------------------------------------- 150 (277)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
++|+||++||..+... ..+..+|++||+
T Consensus 151 ------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asKa 178 (277)
T 4dqx_A 151 ------------GGGSIINTTSYTATSA----------------------------------------IADRTAYVASKG 178 (277)
T ss_dssp ------------TCEEEEEECCGGGTSC----------------------------------------CTTBHHHHHHHH
T ss_pred ------------CCcEEEEECchhhCcC----------------------------------------CCCChhHHHHHH
Confidence 1256666666666441 223456999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
|+..|++.++.++++. ||+||+|+||+|+|++.
T Consensus 179 a~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~ 211 (277)
T 4dqx_A 179 AISSLTRAMAMDHAKE----GIRVNAVAPGTIDSPYF 211 (277)
T ss_dssp HHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHH
T ss_pred HHHHHHHHHHHHhhhc----CeEEEEEeeCcCcCchh
Confidence 9999999999999877 99999999999999984
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.4e-26 Score=207.57 Aligned_cols=161 Identities=25% Similarity=0.341 Sum_probs=124.7
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.+++||++|.++++++++.+.+++|+||+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|+
T Consensus 74 ~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 153 (269)
T 4dmm_A 74 AAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIML 153 (269)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 44577899999999999999999999999999999999999998776666655 88888888888777777777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 154 ~------------------------------------------------------------------------------- 154 (269)
T 4dmm_A 154 K------------------------------------------------------------------------------- 154 (269)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred H-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++.|+||++||..+.. +..+..+|++||
T Consensus 155 ------------~~~g~iv~isS~~~~~----------------------------------------~~~~~~~Y~asK 182 (269)
T 4dmm_A 155 ------------QRSGRIINIASVVGEM----------------------------------------GNPGQANYSAAK 182 (269)
T ss_dssp ------------HTCCEEEEECCHHHHH----------------------------------------CCTTCHHHHHHH
T ss_pred ------------cCCcEEEEECchhhcC----------------------------------------CCCCchhHHHHH
Confidence 1235666666666544 122345699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
+|+..|++.++.+++++ ||+||+|+||+|+|++..... .+......|++|+++
T Consensus 183 ~a~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~~~------~~~~~~~~p~~r~~~ 235 (269)
T 4dmm_A 183 AGVIGLTKTVAKELASR----GITVNAVAPGFIATDMTSELA------AEKLLEVIPLGRYGE 235 (269)
T ss_dssp HHHHHHHHHHHHHHGGG----TCEEEEEEECCBTTSCSCHHH------HHHHGGGCTTSSCBC
T ss_pred HHHHHHHHHHHHHHhhh----CcEEEEEEECCCcCccccccc------HHHHHhcCCCCCCCC
Confidence 99999999999999877 999999999999999965421 122334456666554
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-25 Score=203.09 Aligned_cols=164 Identities=22% Similarity=0.256 Sum_probs=121.6
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+.+.++.+++||++|.++++++++.+.+++|++|+||||||+... .++.+.+ ++|++++++|+.+++.++|++.|.|+
T Consensus 47 ~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~ 126 (254)
T 3kzv_A 47 KYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELK 126 (254)
T ss_dssp HHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 346678999999999999999999999999999999999999654 4666665 78888887777777777776666554
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 127 ~------------------------------------------------------------------------------- 127 (254)
T 3kzv_A 127 K------------------------------------------------------------------------------- 127 (254)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
.+|+||++||..+... ..+..+|++||
T Consensus 128 -------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 154 (254)
T 3kzv_A 128 -------------TNGNVVFVSSDACNMY----------------------------------------FSSWGAYGSSK 154 (254)
T ss_dssp -------------HTCEEEEECCSCCCCS----------------------------------------SCCSHHHHHHH
T ss_pred -------------cCCeEEEEcCchhccC----------------------------------------CCCcchHHHHH
Confidence 1266666766666541 22345699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCC------CcchhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVL------TPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~~~l~r~~~~ 307 (313)
+|+..|++.++.++ . ||+||+|+||+|+|+|.+..... .++..+......|++|+++.
T Consensus 155 ~a~~~~~~~la~e~--~----~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p 218 (254)
T 3kzv_A 155 AALNHFAMTLANEE--R----QVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDS 218 (254)
T ss_dssp HHHHHHHHHHHHHC--T----TSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----C
T ss_pred HHHHHHHHHHHhhc--c----CcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCc
Confidence 99999999999886 2 89999999999999998764221 23334445566788887654
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=206.09 Aligned_cols=169 Identities=21% Similarity=0.167 Sum_probs=127.2
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
++.+.++.++.||++|+++++++++.+.+++|+||+||||||+... .++.+.+ ++|++++++|+.+++.++|++.|.|
T Consensus 53 ~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 132 (280)
T 3tox_A 53 AGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAI 132 (280)
T ss_dssp TTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3457789999999999999999999999999999999999998743 4555555 7888888777777777777777766
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++.
T Consensus 133 ~~~----------------------------------------------------------------------------- 135 (280)
T 3tox_A 133 AAL----------------------------------------------------------------------------- 135 (280)
T ss_dssp HHT-----------------------------------------------------------------------------
T ss_pred HHc-----------------------------------------------------------------------------
Confidence 431
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
++|+||++||..+... +..+..+|++|
T Consensus 136 --------------~~g~iv~isS~~~~~~---------------------------------------~~~~~~~Y~as 162 (280)
T 3tox_A 136 --------------GGGSLTFTSSFVGHTA---------------------------------------GFAGVAPYAAS 162 (280)
T ss_dssp --------------TCEEEEEECCSBTTTB---------------------------------------CCTTCHHHHHH
T ss_pred --------------CCCEEEEEcChhhCcC---------------------------------------CCCCchhHHHH
Confidence 1356666666665421 12233569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc-cCCCCcchhhhhhhhhhcccCCcc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH-KGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+|+..|++.++.++++. ||+||+|+||+|+|++... .....++.........|++|+++.
T Consensus 163 Kaa~~~l~~~la~e~~~~----gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 224 (280)
T 3tox_A 163 KAGLIGLVQALAVELGAR----GIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARP 224 (280)
T ss_dssp HHHHHHHHHHHHHHHHTT----TEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCH
T ss_pred HHHHHHHHHHHHHHhhhc----CeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCH
Confidence 999999999999998876 9999999999999999765 222233443444556677776654
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=205.70 Aligned_cols=166 Identities=21% Similarity=0.182 Sum_probs=128.5
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.+++||++|+++++++++.+.+++|+||+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++.
T Consensus 68 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 147 (266)
T 4egf_A 68 FGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAA 147 (266)
T ss_dssp HCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 477899999999999999999999999999999999999998777666665 8888888888888877777777766431
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 148 -------------------------------------------------------------------------------- 147 (266)
T 4egf_A 148 -------------------------------------------------------------------------------- 147 (266)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
.++|+||++||..+... ..+..+|++||+|
T Consensus 148 ----------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK~a 177 (266)
T 4egf_A 148 ----------GEGGAIITVASAAALAP----------------------------------------LPDHYAYCTSKAG 177 (266)
T ss_dssp ----------TSCEEEEEECCGGGTSC----------------------------------------CTTCHHHHHHHHH
T ss_pred ----------CCCeEEEEEcchhhccC----------------------------------------CCCChHHHHHHHH
Confidence 01256666766666541 2234569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+..|++.++.+++++ ||+||+|+||+|+|++.+... ..++.........|++|+++.
T Consensus 178 ~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~~r~~~p 234 (266)
T 4egf_A 178 LVMATKVLARELGPH----GIRANSVCPTVVLTEMGQRVW-GDEAKSAPMIARIPLGRFAVP 234 (266)
T ss_dssp HHHHHHHHHHHHGGG----TEEEEEEEESCBCSHHHHHHT-CSHHHHHHHHTTCTTSSCBCH
T ss_pred HHHHHHHHHHHHhhh----CeEEEEEEeCCCcCchhhhhc-cChHHHHHHHhcCCCCCCcCH
Confidence 999999999999877 999999999999999976542 123333444556677777653
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-25 Score=204.89 Aligned_cols=164 Identities=24% Similarity=0.229 Sum_probs=125.9
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.+++||++|.++++++++.+.+++|++|+||||||+....++.+++ ++|++.+++|+.+++.++|++.|.|++
T Consensus 51 ~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 130 (255)
T 4eso_A 51 EFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE 130 (255)
T ss_dssp HHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred HhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc
Confidence 3466789999999999999999999999999999999999998877777766 999999988888888877777776655
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
+
T Consensus 131 ~------------------------------------------------------------------------------- 131 (255)
T 4eso_A 131 G------------------------------------------------------------------------------- 131 (255)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 4
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
|+||++||.++... ..+..+|++||+
T Consensus 132 --------------g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asKa 157 (255)
T 4eso_A 132 --------------GSIVFTSSVADEGG----------------------------------------HPGMSVYSASKA 157 (255)
T ss_dssp --------------EEEEEECCGGGSSB----------------------------------------CTTBHHHHHHHH
T ss_pred --------------CEEEEECChhhcCC----------------------------------------CCCchHHHHHHH
Confidence 45555555555431 223356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchh----hhhhhhhhcccCCcc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQG----KIRQKIYLLKRTNKF 307 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~----~~~~~~~~l~r~~~~ 307 (313)
|+..|++.++.+++++ ||+||+|+||+|+|++.+... ...... .......|++|+++.
T Consensus 158 a~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~p~~r~~~p 219 (255)
T 4eso_A 158 ALVSFASVLAAELLPR----GIRVNSVSPGFIDTPTKGVAG-ITEAERAEFKTLGDNITPMKRNGTA 219 (255)
T ss_dssp HHHHHHHHHHHHTGGG----TCEEEEEEECSBCCSSTTCTT-SCHHHHHHHHHHHHHHSTTSSCBCH
T ss_pred HHHHHHHHHHHHHhhh----CcEEEEEecCcccCccccccc-CChhhHHHHHHHHhccCCCCCCcCH
Confidence 9999999999998876 999999999999999876431 121111 222345688887754
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=202.58 Aligned_cols=169 Identities=18% Similarity=0.173 Sum_probs=119.2
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCC----Chh-HHHHHHHhHHHHHHHHHHHHHH
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPG----SFG-QRAETTLATNFFALVTVCHILF 79 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~----~~~-~~~~~~~~vNl~~~i~l~ra~~ 79 (313)
++.+.++.+++||++|+++++++++.+.+++|+||+||||||+.....+. +.+ ++|++++++|+.+++.++|++.
T Consensus 49 ~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 128 (257)
T 3tpc_A 49 AELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAA 128 (257)
T ss_dssp ------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 34566788999999999999999999999999999999999998755332 333 8888888888888888888888
Q ss_pred hcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhc
Q psy2266 80 PLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLAT 159 (313)
Q Consensus 80 ~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~ 159 (313)
|.|++...
T Consensus 129 ~~m~~~~~------------------------------------------------------------------------ 136 (257)
T 3tpc_A 129 EVMSQGEP------------------------------------------------------------------------ 136 (257)
T ss_dssp HHHTTSCC------------------------------------------------------------------------
T ss_pred HHHHhccc------------------------------------------------------------------------
Confidence 87765210
Q ss_pred ccccHHHHHHHHhhcc-cCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCc
Q psy2266 160 NFFALVTVCHILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFS 238 (313)
Q Consensus 160 N~~g~~~~~~~~~p~l-~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
.. .++|+||++||..+... ..+..+
T Consensus 137 --------------~~~~~~g~iv~isS~~~~~~----------------------------------------~~~~~~ 162 (257)
T 3tpc_A 137 --------------DADGERGVIVNTASIAAFDG----------------------------------------QIGQAA 162 (257)
T ss_dssp --------------CTTSCCEEEEEECCTHHHHC----------------------------------------CTTCHH
T ss_pred --------------cCCCCCeEEEEEechhhccC----------------------------------------CCCCcc
Confidence 00 12378888888887652 233456
Q ss_pred hhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhc-ccCCc
Q psy2266 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLL-KRTNK 306 (313)
Q Consensus 239 Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l-~r~~~ 306 (313)
|++||+|+..|++.++.++++. ||+||+|+||+|+|++.+.. .++..+......|+ +|+++
T Consensus 163 Y~asKaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~~~r~~~ 224 (257)
T 3tpc_A 163 YAASKGGVAALTLPAARELARF----GIRVVTIAPGIFDTPMMAGM---PQDVQDALAASVPFPPRLGR 224 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBSCC-----------------CCSSSSCSCBC
T ss_pred hHHHHHHHHHHHHHHHHHHHHc----CeEEEEEEeCCCCChhhccC---CHHHHHHHHhcCCCCCCCCC
Confidence 9999999999999999999877 99999999999999997653 22222333344566 66654
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.5e-26 Score=208.05 Aligned_cols=168 Identities=24% Similarity=0.244 Sum_probs=127.8
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHh--c
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFP--L 81 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~--~ 81 (313)
++.+.++.++.||++|.++++++++.+.+++|+||+||||||+....++.+.+ ++|++++++|+.+++.++|++.| .
T Consensus 69 ~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 148 (279)
T 3sju_A 69 RAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGG 148 (279)
T ss_dssp HTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSS
T ss_pred HhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhh
Confidence 44577899999999999999999999999999999999999998776666665 88888888888888777777776 3
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++
T Consensus 149 ~~~----------------------------------------------------------------------------- 151 (279)
T 3sju_A 149 MRE----------------------------------------------------------------------------- 151 (279)
T ss_dssp HHH-----------------------------------------------------------------------------
T ss_pred Hhh-----------------------------------------------------------------------------
Confidence 432
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
++.|+||++||..+... ..+..+|++
T Consensus 152 --------------~~~g~iV~isS~~~~~~----------------------------------------~~~~~~Y~a 177 (279)
T 3sju_A 152 --------------AGWGRIVNIASTGGKQG----------------------------------------VMYAAPYTA 177 (279)
T ss_dssp --------------HTCEEEEEECCGGGTSC----------------------------------------CTTCHHHHH
T ss_pred --------------cCCcEEEEECChhhccC----------------------------------------CCCChhHHH
Confidence 11256677777666541 223456999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCC--------CCcchhhhhhhhhhcccCCcc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGV--------LTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~--------~~~~~~~~~~~~~~l~r~~~~ 307 (313)
||+|+..|++.++.++++. ||+||+|+||+|+|++.+.... ..++..+......|++|+++.
T Consensus 178 sKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 247 (279)
T 3sju_A 178 SKHGVVGFTKSVGFELAKT----GITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTP 247 (279)
T ss_dssp HHHHHHHHHHHHHHHTGGG----TEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCH
T ss_pred HHHHHHHHHHHHHHHHHhh----CcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCH
Confidence 9999999999999998876 9999999999999998754210 122233344455678877654
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-25 Score=207.03 Aligned_cols=162 Identities=19% Similarity=0.151 Sum_probs=126.6
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.++.+++||++|+++++++++.+.+++|+||+||||||+....++.+++ ++|++.+++|+.+++.++|++.|.|++
T Consensus 91 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--- 167 (293)
T 3rih_A 91 GNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTA--- 167 (293)
T ss_dssp SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHH---
T ss_pred CcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---
Confidence 6789999999999999999999999999999999999998877776766 888888877777777777776666543
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 168 -------------------------------------------------------------------------------- 167 (293)
T 3rih_A 168 -------------------------------------------------------------------------------- 167 (293)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
++.|+||++||..+... +..+..+|++||+|+.
T Consensus 168 --------~~~g~iV~isS~~~~~~---------------------------------------~~~~~~~Y~asKaa~~ 200 (293)
T 3rih_A 168 --------SGRGRVILTSSITGPVT---------------------------------------GYPGWSHYGASKAAQL 200 (293)
T ss_dssp --------HSSCEEEEECCSBTTTB---------------------------------------BCTTCHHHHHHHHHHH
T ss_pred --------cCCCEEEEEeChhhccC---------------------------------------CCCCCHHHHHHHHHHH
Confidence 12366777777666421 1223356999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
.|++.++.++++. ||+||+|+||+|.|++.... .++..+......|++|+++.
T Consensus 201 ~l~~~la~e~~~~----gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~~r~~~p 253 (293)
T 3rih_A 201 GFMRTAAIELAPR----GVTVNAILPGNILTEGLVDM---GEEYISGMARSIPMGMLGSP 253 (293)
T ss_dssp HHHHHHHHHHGGG----TCEEEEEEECSBCCHHHHHT---CHHHHHHHHTTSTTSSCBCH
T ss_pred HHHHHHHHHHhhh----CeEEEEEecCCCcCcchhhc---cHHHHHHHHhcCCCCCCCCH
Confidence 9999999999877 99999999999999987653 23334444556677777654
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.2e-25 Score=202.25 Aligned_cols=167 Identities=21% Similarity=0.241 Sum_probs=130.6
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.+++||++|+++++++++.+.+++|+||+||||||+.....+.+.+ ++|++++++|+.+++.++|++.|.|+
T Consensus 77 ~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 156 (276)
T 3r1i_A 77 AGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMV 156 (276)
T ss_dssp HHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44577889999999999999999999999999999999999998877666666 99999999999999999999888875
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 157 ~~------------------------------------------------------------------------------ 158 (276)
T 3r1i_A 157 DQ------------------------------------------------------------------------------ 158 (276)
T ss_dssp HH------------------------------------------------------------------------------
T ss_pred Hc------------------------------------------------------------------------------
Confidence 41
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
..+|+||++||..+.... ...+...|++||
T Consensus 159 ------------~~~g~iv~isS~~~~~~~--------------------------------------~~~~~~~Y~asK 188 (276)
T 3r1i_A 159 ------------GLGGTIITTASMSGHIIN--------------------------------------IPQQVSHYCTSK 188 (276)
T ss_dssp ------------TSCEEEEEECCGGGTSCC--------------------------------------CSSCCHHHHHHH
T ss_pred ------------CCCcEEEEECchHhcccC--------------------------------------CCCCcchHHHHH
Confidence 001455555555543311 011234699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+|+..|++.++.++++. ||+||+|+||+|+|++.+.. ++..+......|++|+++.
T Consensus 189 aa~~~l~~~la~e~~~~----gIrvn~v~PG~v~T~~~~~~----~~~~~~~~~~~p~~r~~~p 244 (276)
T 3r1i_A 189 AAVVHLTKAMAVELAPH----QIRVNSVSPGYIRTELVEPL----ADYHALWEPKIPLGRMGRP 244 (276)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECCBCSTTTGGG----GGGHHHHGGGSTTSSCBCG
T ss_pred HHHHHHHHHHHHHHhhc----CcEEEEEeeCCCcCCccccc----hHHHHHHHhcCCCCCCcCH
Confidence 99999999999999876 99999999999999997653 2233344556677777654
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-25 Score=203.96 Aligned_cols=165 Identities=19% Similarity=0.190 Sum_probs=124.4
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD--TAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~--~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
+.+.++.+++||++|+++++++++.+.+++|++|+||||||+... ..+.+++ ++|++++++|+.+++.++|++.|.|
T Consensus 54 ~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 133 (271)
T 3tzq_B 54 SVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRL 133 (271)
T ss_dssp HHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 346778899999999999999999999999999999999999743 3444555 8888888888888888777777766
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++.
T Consensus 134 ~~~----------------------------------------------------------------------------- 136 (271)
T 3tzq_B 134 ISA----------------------------------------------------------------------------- 136 (271)
T ss_dssp HHT-----------------------------------------------------------------------------
T ss_pred Hhc-----------------------------------------------------------------------------
Confidence 431
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
+.|+||++||..+... ..+..+|++|
T Consensus 137 --------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~as 162 (271)
T 3tzq_B 137 --------------GGGAIVNISSATAHAA----------------------------------------YDMSTAYACT 162 (271)
T ss_dssp --------------TCEEEEEECCGGGTSB----------------------------------------CSSCHHHHHH
T ss_pred --------------CCCEEEEECCHHHcCC----------------------------------------CCCChHHHHH
Confidence 1256666666665441 2233569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+|+..|++.++.++++. ||+||+|+||+|+|++.+.. ..++.........|++|+++.
T Consensus 163 Kaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~r~~~p 221 (271)
T 3tzq_B 163 KAAIETLTRYVATQYGRH----GVRCNAIAPGLVRTPRLEVG--LPQPIVDIFATHHLAGRIGEP 221 (271)
T ss_dssp HHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCTTTC-----CHHHHHHHHTTSTTSSCBCH
T ss_pred HHHHHHHHHHHHHHHhhc----CEEEEEEEeCCCcCcccccc--CCHHHHHHHHhcCCCCCCcCH
Confidence 999999999999999876 99999999999999987632 233333444455677776653
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.1e-25 Score=202.97 Aligned_cols=144 Identities=24% Similarity=0.341 Sum_probs=118.1
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.+++||++|+++++++++.+.+++|++|+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|+
T Consensus 67 ~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 146 (281)
T 3s55_A 67 EKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMI 146 (281)
T ss_dssp HHTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCeEEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34577899999999999999999999999999999999999998877776666 88888888888888877777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 147 ~------------------------------------------------------------------------------- 147 (281)
T 3s55_A 147 K------------------------------------------------------------------------------- 147 (281)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred H-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++.|+||++||..+... ..+..+|++||
T Consensus 148 ------------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 175 (281)
T 3s55_A 148 ------------RNYGRIVTVSSMLGHSA----------------------------------------NFAQASYVSSK 175 (281)
T ss_dssp ------------HTCEEEEEECCGGGGSC----------------------------------------CTTCHHHHHHH
T ss_pred ------------cCCCEEEEECChhhcCC----------------------------------------CCCCchhHHHH
Confidence 12356666666666541 22345699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+|+..|++.++.++++. ||+||+|+||+|+||+.+.
T Consensus 176 ~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~ 211 (281)
T 3s55_A 176 WGVIGLTKCAAHDLVGY----GITVNAVAPGNIETPMTHN 211 (281)
T ss_dssp HHHHHHHHHHHHHTGGG----TEEEEEEEECSBCSTTTSS
T ss_pred HHHHHHHHHHHHHHhhc----CcEEEEEecCcccCccccc
Confidence 99999999999998876 9999999999999999753
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-25 Score=206.60 Aligned_cols=143 Identities=24% Similarity=0.286 Sum_probs=118.0
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.+++||++|+++++++++.+.+++|+||+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 72 ~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 151 (277)
T 3gvc_A 72 KIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIE 151 (277)
T ss_dssp HHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 4467789999999999999999999999999999999999998777776666 888988888888888888888777743
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 152 -------------------------------------------------------------------------------- 151 (277)
T 3gvc_A 152 -------------------------------------------------------------------------------- 151 (277)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+++|+||++||..+.. +..+..+|++||+
T Consensus 152 -----------~~~g~Iv~isS~~~~~----------------------------------------~~~~~~~Y~asKa 180 (277)
T 3gvc_A 152 -----------RGGGAIVNLSSLAGQV----------------------------------------AVGGTGAYGMSKA 180 (277)
T ss_dssp -----------TTCEEEEEECCGGGTS----------------------------------------CCTTBHHHHHHHH
T ss_pred -----------cCCcEEEEEcchhhcc----------------------------------------CCCCchhHHHHHH
Confidence 1235666666666544 1223356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|+..|++.++.++++. ||+||+|+||+|+||+.+.
T Consensus 181 a~~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~~~~ 215 (277)
T 3gvc_A 181 GIIQLSRITAAELRSS----GIRSNTLLPAFVDTPMQQT 215 (277)
T ss_dssp HHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHH
T ss_pred HHHHHHHHHHHHhccc----CeEEEEEeeCCccCchHHH
Confidence 9999999999999876 9999999999999998654
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-25 Score=204.65 Aligned_cols=162 Identities=19% Similarity=0.141 Sum_probs=124.1
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCC-CCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIY-RDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~-~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
++.+++||++|+++++++++.+.+++|++|+||||||+. ...++.+++ ++|++.+++|+.+++.++|++.|.|++
T Consensus 64 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--- 140 (281)
T 3svt_A 64 AIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVR--- 140 (281)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---
Confidence 788999999999999999999999999999999999984 444555555 888888888888888888877777643
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 141 -------------------------------------------------------------------------------- 140 (281)
T 3svt_A 141 -------------------------------------------------------------------------------- 140 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
+++|+||++||..+... ..+..+|++||+|+.
T Consensus 141 --------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK~a~~ 172 (281)
T 3svt_A 141 --------GGGGSFVGISSIAASNT----------------------------------------HRWFGAYGVTKSAVD 172 (281)
T ss_dssp --------TTCEEEEEECCHHHHSC----------------------------------------CTTCTHHHHHHHHHH
T ss_pred --------cCCcEEEEEeCHHHcCC----------------------------------------CCCChhHHHHHHHHH
Confidence 11256666666655431 223456999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
.|++.++.+++++ ||+||+|+||+|+|++.+... ..++.........|++|+++.
T Consensus 173 ~l~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p~~r~~~~ 227 (281)
T 3svt_A 173 HLMQLAADELGAS----WVRVNSIRPGLIRTDLVAAIT-ESAELSSDYAMCTPLPRQGEV 227 (281)
T ss_dssp HHHHHHHHHHGGG----TEEEEEEEECSBCSGGGHHHH-TCHHHHHHHHHHCSSSSCBCH
T ss_pred HHHHHHHHHhhhc----CeEEEEEEeCcCcCcchhhcc-cCHHHHHHHHhcCCCCCCCCH
Confidence 9999999999877 999999999999999976531 122333444455677777653
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-25 Score=199.39 Aligned_cols=164 Identities=23% Similarity=0.336 Sum_probs=128.9
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.++++|++|.++++++++.+.+++|++|+||||||+.....+.+++ ++|++++++|+.+++.++|++.|.|+
T Consensus 59 ~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 138 (256)
T 3ezl_A 59 KALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMV 138 (256)
T ss_dssp HHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34567889999999999999999999999999999999999998877666665 88888887777777777777776664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 139 ~------------------------------------------------------------------------------- 139 (256)
T 3ezl_A 139 E------------------------------------------------------------------------------- 139 (256)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++.|+||++||..+... ..+...|++||
T Consensus 140 ------------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 167 (256)
T 3ezl_A 140 ------------RGWGRIINISSVNGQKG----------------------------------------QFGQTNYSTAK 167 (256)
T ss_dssp ------------HTCEEEEEECCCCGGGS----------------------------------------CSCCHHHHHHH
T ss_pred ------------cCCCEEEEEcchhhccC----------------------------------------CCCCcccHHHH
Confidence 11266777777766541 23345699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
+|+..|++.++.+++.+ ||+||+|+||+|+|++.+.. .++..+......|++|++.
T Consensus 168 ~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~ 223 (256)
T 3ezl_A 168 AGIHGFTMSLAQEVATK----GVTVNTVSPGYIGTDMVKAI---RPDVLEKIVATIPVRRLGS 223 (256)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHTS---CHHHHHHHHHHSTTSSCBC
T ss_pred HHHHHHHHHHHHHHHHh----CCEEEEEEECcccCcccccc---CHHHHHHHHhcCCCCCCcC
Confidence 99999999999999876 99999999999999998763 4444444555566666654
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.8e-25 Score=202.30 Aligned_cols=145 Identities=26% Similarity=0.257 Sum_probs=117.0
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+..+.++.+++||++|.++++++++.+.+++|+||+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|+
T Consensus 69 ~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 148 (277)
T 3tsc_A 69 EAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRII 148 (277)
T ss_dssp HHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 34577899999999999999999999999999999999999998776666665 88888887777777777777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 149 ~~------------------------------------------------------------------------------ 150 (277)
T 3tsc_A 149 EG------------------------------------------------------------------------------ 150 (277)
T ss_dssp HH------------------------------------------------------------------------------
T ss_pred hc------------------------------------------------------------------------------
Confidence 31
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
.++|+||++||..+... ..+..+|++||
T Consensus 151 ------------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 178 (277)
T 3tsc_A 151 ------------GRGGSIILISSAAGMKM----------------------------------------QPFMIHYTASK 178 (277)
T ss_dssp ------------TSCEEEEEECCGGGTSC----------------------------------------CSSCHHHHHHH
T ss_pred ------------CCCCEEEEEccHhhCCC----------------------------------------CCCchhhHHHH
Confidence 01356777777666541 22335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+|+..|++.++.+++++ ||+||+|+||+|+|++.+.
T Consensus 179 aa~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~ 214 (277)
T 3tsc_A 179 HAVTGLARAFAAELGKH----SIRVNSVHPGPVNTPMGSG 214 (277)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEESSBSSGGGSH
T ss_pred HHHHHHHHHHHHHhCcc----CeEEEEEEeCCCcCCcccc
Confidence 99999999999999876 9999999999999998653
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-25 Score=206.30 Aligned_cols=167 Identities=19% Similarity=0.213 Sum_probs=125.8
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++..++||++|.++++++++.+.+. |++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|+
T Consensus 78 ~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 156 (275)
T 4imr_A 78 IASGGTAQELAGDLSEAGAGTDLIERAEAI-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMV 156 (275)
T ss_dssp HHTTCCEEEEECCTTSTTHHHHHHHHHHHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCeEEEEEecCCCHHHHHHHHHHHHHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 345778999999999999999999999887 9999999999998766666655 88888887777777777777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 157 ~------------------------------------------------------------------------------- 157 (275)
T 4imr_A 157 A------------------------------------------------------------------------------- 157 (275)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++.|+||++||..+.. +..+..+|++||
T Consensus 158 ------------~~~g~Iv~isS~~~~~----------------------------------------~~~~~~~Y~asK 185 (275)
T 4imr_A 158 ------------RKWGRVVSIGSINQLR----------------------------------------PKSVVTAYAATK 185 (275)
T ss_dssp ------------HTCEEEEEECCGGGTS----------------------------------------CCTTBHHHHHHH
T ss_pred ------------cCCcEEEEECCHHhCC----------------------------------------CCCCchhhHHHH
Confidence 1235666666666543 122334599999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhh-hcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIY-LLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~l~r~~~~ 307 (313)
+|+..|++.++.+++++ ||+||+|+||+|+|++........++......... |++|+++.
T Consensus 186 aa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 246 (275)
T 4imr_A 186 AAQHNLIQSQARDFAGD----NVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRP 246 (275)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCG
T ss_pred HHHHHHHHHHHHHhccc----CcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCH
Confidence 99999999999999877 99999999999999987653222233333333344 77887654
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=206.03 Aligned_cols=168 Identities=22% Similarity=0.275 Sum_probs=110.0
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCC--CCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIY--RDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~--~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
++.+.++.+++||++|+++++++++.+.+++|+||+||||||+. ...++.+++ ++|++++++|+.+++.++|++.|.
T Consensus 75 ~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 154 (280)
T 4da9_A 75 SGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKA 154 (280)
T ss_dssp HHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34577899999999999999999999999999999999999994 344555555 778888877777777777777776
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++.+.
T Consensus 155 ~~~~~~-------------------------------------------------------------------------- 160 (280)
T 4da9_A 155 MLASDA-------------------------------------------------------------------------- 160 (280)
T ss_dssp HHHHCC--------------------------------------------------------------------------
T ss_pred HHHhCC--------------------------------------------------------------------------
Confidence 643100
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
+++|+||++||..+... ..+..+|++
T Consensus 161 --------------~~~g~Iv~isS~~~~~~----------------------------------------~~~~~~Y~a 186 (280)
T 4da9_A 161 --------------RASRSIINITSVSAVMT----------------------------------------SPERLDYCM 186 (280)
T ss_dssp --------------CCCEEEEEECCC-----------------------------------------------CCHHHHH
T ss_pred --------------CCCCEEEEEcchhhccC----------------------------------------CCCccHHHH
Confidence 11367777777776541 223356999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhh-hhhcccCCcc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQK-IYLLKRTNKF 307 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~l~r~~~~ 307 (313)
||+|+..|++.++.++++. ||+||+|+||+|+|++.+... ++....... ..|++|+++.
T Consensus 187 sKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~p~~r~~~p 246 (280)
T 4da9_A 187 SKAGLAAFSQGLALRLAET----GIAVFEVRPGIIRSDMTAAVS---GKYDGLIESGLVPMRRWGEP 246 (280)
T ss_dssp HHHHHHHHHHHHHHHHTTT----TEEEEEEEECCBCC-------------------------CCBCH
T ss_pred HHHHHHHHHHHHHHHHHHh----CcEEEEEeecCCcCCchhhcc---hhHHHHHhhcCCCcCCcCCH
Confidence 9999999999999998766 999999999999999977531 111122222 4677776653
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.7e-25 Score=204.15 Aligned_cols=161 Identities=17% Similarity=0.110 Sum_probs=120.3
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC----CCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR----DTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~----~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+++.+++||++|.++++++++.+.++||+||+||||||+.. ..++.+.+ ++|++.+++|+.+++.++|++.|.|+
T Consensus 81 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 160 (293)
T 3grk_A 81 GAFVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMA 160 (293)
T ss_dssp TCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTT
T ss_pred CCceEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 36788999999999999999999999999999999999986 34555555 99999998888888888888777776
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
++|+||++||
T Consensus 161 ~~g~Iv~isS---------------------------------------------------------------------- 170 (293)
T 3grk_A 161 DGGSILTLTY---------------------------------------------------------------------- 170 (293)
T ss_dssp TCEEEEEEEC----------------------------------------------------------------------
T ss_pred CCCEEEEEee----------------------------------------------------------------------
Confidence 6555555555
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
..+.. +..+..+|++||
T Consensus 171 -----------------------~~~~~----------------------------------------~~~~~~~Y~asK 187 (293)
T 3grk_A 171 -----------------------YGAEK----------------------------------------VMPNYNVMGVAK 187 (293)
T ss_dssp -----------------------GGGTS----------------------------------------BCTTTTHHHHHH
T ss_pred -----------------------hhhcc----------------------------------------CCCchHHHHHHH
Confidence 44432 122335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+|+..|++.++.++++. ||+||+|+||+|+|++.+... ..++.........|++|.++.
T Consensus 188 aa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~~r~~~p 246 (293)
T 3grk_A 188 AALEASVKYLAVDLGPQ----NIRVNAISAGPIKTLAASGIG-DFRYILKWNEYNAPLRRTVTI 246 (293)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECCCCC------C-CHHHHHHHHHHHSTTSSCCCH
T ss_pred HHHHHHHHHHHHHHhHh----CCEEEEEecCCCcchhhhccc-chHHHHHHHHhcCCCCCCCCH
Confidence 99999999999999877 999999999999999976531 112233444456677776653
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.2e-25 Score=201.56 Aligned_cols=168 Identities=21% Similarity=0.192 Sum_probs=127.1
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.+++||++|+++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 51 ~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 130 (259)
T 4e6p_A 51 EIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIA 130 (259)
T ss_dssp HHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 4466788999999999999999999999999999999999998766666665 888888888888887777777776643
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 131 ~------------------------------------------------------------------------------- 131 (259)
T 4e6p_A 131 Q------------------------------------------------------------------------------- 131 (259)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.++|+||++||..+... ..+..+|++||+
T Consensus 132 -----------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK~ 160 (259)
T 4e6p_A 132 -----------GRGGKIINMASQAGRRG----------------------------------------EALVAIYCATKA 160 (259)
T ss_dssp -----------TSCEEEEEECCGGGTSC----------------------------------------CTTBHHHHHHHH
T ss_pred -----------CCCeEEEEECChhhccC----------------------------------------CCCChHHHHHHH
Confidence 01356777777666541 223356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccC--------CCCcchhhhhhhhhhcccCCcc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG--------VLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~--------~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+..|++.++.++++. ||+||+|+||+|+||+.+... ...++.........|++|+++.
T Consensus 161 a~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~ 227 (259)
T 4e6p_A 161 AVISLTQSAGLDLIKH----RINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTA 227 (259)
T ss_dssp HHHHHHHHHHHHHGGG----TEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCT
T ss_pred HHHHHHHHHHHHhhhc----CCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCH
Confidence 9999999999999876 999999999999999865420 1122333334455677777654
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.9e-25 Score=203.56 Aligned_cols=166 Identities=22% Similarity=0.203 Sum_probs=126.7
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
+++.+.++.+++||++|+++++++++.+.+++|++|+||||||+... ..+.+++ ++|++++++|+.+++.++|++.|.
T Consensus 95 ~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 174 (294)
T 3r3s_A 95 IEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPL 174 (294)
T ss_dssp HHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred HHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 34567789999999999999999999999999999999999998653 4556665 999999988888888877777776
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|+++|+
T Consensus 175 ~~~~g~-------------------------------------------------------------------------- 180 (294)
T 3r3s_A 175 LPKGAS-------------------------------------------------------------------------- 180 (294)
T ss_dssp CCTTCE--------------------------------------------------------------------------
T ss_pred hhcCCE--------------------------------------------------------------------------
Confidence 655444
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
||++||..+.. +..+...|++
T Consensus 181 -------------------Iv~isS~~~~~----------------------------------------~~~~~~~Y~a 201 (294)
T 3r3s_A 181 -------------------IITTSSIQAYQ----------------------------------------PSPHLLDYAA 201 (294)
T ss_dssp -------------------EEEECCGGGTS----------------------------------------CCTTCHHHHH
T ss_pred -------------------EEEECChhhcc----------------------------------------CCCCchHHHH
Confidence 55555555433 1223346999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
||+|+..|++.++.+++++ ||+||+|+||+|+|++.... ...++.........|++|+++.
T Consensus 202 sKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~p~~r~~~p 262 (294)
T 3r3s_A 202 TKAAILNYSRGLAKQVAEK----GIRVNIVAPGPIWTALQISG-GQTQDKIPQFGQQTPMKRAGQP 262 (294)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSHHHHTT-TSCGGGSTTTTTTSTTSSCBCG
T ss_pred HHHHHHHHHHHHHHHHhhc----CeEEEEEecCcCcccccccc-CCCHHHHHHHHhcCCCCCCcCH
Confidence 9999999999999999877 99999999999999984332 1233333444556677777654
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.5e-25 Score=200.95 Aligned_cols=164 Identities=18% Similarity=0.186 Sum_probs=113.4
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCC-CCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIY-RDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~-~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
++.+.++.+++||++|.++++++++.+.+++|++|+||||||+. ...++.+++ ++|++++++|+.+++.++|++.|.|
T Consensus 54 ~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~ 133 (259)
T 3edm_A 54 EKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKM 133 (259)
T ss_dssp HTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred HhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45577899999999999999999999999999999999999987 445666766 9999999888888888888777776
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
+++|+||+
T Consensus 134 ~~~g~iv~------------------------------------------------------------------------ 141 (259)
T 3edm_A 134 AKGGAIVT------------------------------------------------------------------------ 141 (259)
T ss_dssp EEEEEEEE------------------------------------------------------------------------
T ss_pred hcCCEEEE------------------------------------------------------------------------
Confidence 55545554
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
+||..+... +..+..+|++|
T Consensus 142 ---------------------isS~~~~~~---------------------------------------~~~~~~~Y~as 161 (259)
T 3edm_A 142 ---------------------FSSQAGRDG---------------------------------------GGPGALAYATS 161 (259)
T ss_dssp ---------------------ECCHHHHHC---------------------------------------CSTTCHHHHHH
T ss_pred ---------------------EcCHHhccC---------------------------------------CCCCcHHHHHH
Confidence 444444310 12233469999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+|+..|++.++.++++ +|+||+|+||+|+|++.+... .++..+......|++|.++.
T Consensus 162 Kaa~~~l~~~la~e~~~-----~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~p~~r~~~p 219 (259)
T 3edm_A 162 KGAVMTFTRGLAKEVGP-----KIRVNAVCPGMISTTFHDTFT--KPEVRERVAGATSLKREGSS 219 (259)
T ss_dssp HHHHHHHHHHHHHHHTT-----TCEEEEEEECCBCC------------------------CCBCH
T ss_pred HHHHHHHHHHHHHHHCC-----CCEEEEEEECCCcCccccccc--ChHHHHHHHhcCCCCCCcCH
Confidence 99999999999988753 399999999999999977642 23333344455677776653
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-25 Score=202.95 Aligned_cols=166 Identities=21% Similarity=0.204 Sum_probs=125.5
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.+++||++|.++++++.+. .+++|+||+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|+
T Consensus 75 ~~~~~~~~~~~~Dv~d~~~v~~~~~~-~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 153 (273)
T 3uf0_A 75 ADGGGSAEAVVADLADLEGAANVAEE-LAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAML 153 (273)
T ss_dssp HTTTCEEEEEECCTTCHHHHHHHHHH-HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEecCCCHHHHHHHHHH-HHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34577889999999999999999554 45679999999999998877666665 88888888888777777777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 154 ~------------------------------------------------------------------------------- 154 (273)
T 3uf0_A 154 A------------------------------------------------------------------------------- 154 (273)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++.|+||++||..+.. +..+..+|++||
T Consensus 155 ------------~~~g~IV~isS~~~~~----------------------------------------~~~~~~~Y~asK 182 (273)
T 3uf0_A 155 ------------HGSGRIVTIASMLSFQ----------------------------------------GGRNVAAYAASK 182 (273)
T ss_dssp ------------HTCEEEEEECCGGGTS----------------------------------------CCSSCHHHHHHH
T ss_pred ------------cCCCEEEEEcchHhcC----------------------------------------CCCCChhHHHHH
Confidence 1235666777766654 123345699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+|+..|++.++.++++. ||+||+|+||+|.|++..... ..++.........|++|+++.
T Consensus 183 aa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~~r~~~p 241 (273)
T 3uf0_A 183 HAVVGLTRALASEWAGR----GVGVNALAPGYVVTANTAALR-ADDERAAEITARIPAGRWATP 241 (273)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSGGGHHHH-TSHHHHHHHHHHSTTSSCBCG
T ss_pred HHHHHHHHHHHHHHhhc----CcEEEEEEeCCCcCCchhhcc-cCHHHHHHHHhcCCCCCCCCH
Confidence 99999999999999877 999999999999999976532 123333444556677777654
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.7e-25 Score=203.85 Aligned_cols=165 Identities=19% Similarity=0.209 Sum_probs=126.2
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
+++.+.++.+++||++|+++++++++.+.+++|+||+||||||+... ..+.+++ ++|++++++|+.+++.++|++.|.
T Consensus 92 ~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 171 (291)
T 3ijr_A 92 VEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSH 171 (291)
T ss_dssp HHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred HHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 34567889999999999999999999999999999999999998754 3555555 999999988888888888877776
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|+++++
T Consensus 172 ~~~~g~-------------------------------------------------------------------------- 177 (291)
T 3ijr_A 172 LKQGDV-------------------------------------------------------------------------- 177 (291)
T ss_dssp CCTTCE--------------------------------------------------------------------------
T ss_pred HhhCCE--------------------------------------------------------------------------
Confidence 655444
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
||++||..+.. +..+..+|++
T Consensus 178 -------------------iv~isS~~~~~----------------------------------------~~~~~~~Y~a 198 (291)
T 3ijr_A 178 -------------------IINTASIVAYE----------------------------------------GNETLIDYSA 198 (291)
T ss_dssp -------------------EEEECCTHHHH----------------------------------------CCTTCHHHHH
T ss_pred -------------------EEEEechHhcC----------------------------------------CCCCChhHHH
Confidence 55555555433 1223356999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
||+|+..|++.++.+++++ ||+||+|+||+|+|++.... ..++.........|++|+++.
T Consensus 199 sKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~p~~r~~~p 258 (291)
T 3ijr_A 199 TKGAIVAFTRSLSQSLVQK----GIRVNGVAPGPIWTPLIPSS--FDEKKVSQFGSNVPMQRPGQP 258 (291)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSTHHHHH--SCHHHHHHTTTTSTTSSCBCG
T ss_pred HHHHHHHHHHHHHHHHhhc----CEEEEEEeeCCCcCCccccc--CCHHHHHHHHccCCCCCCcCH
Confidence 9999999999999999877 99999999999999986542 223333334445566766653
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.9e-25 Score=197.72 Aligned_cols=163 Identities=21% Similarity=0.312 Sum_probs=122.1
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.+++||++|+++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 51 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 130 (246)
T 2uvd_A 51 KLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMR 130 (246)
T ss_dssp HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3467788999999999999999999999999999999999998765555555 778888877777777777776666643
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 131 -------------------------------------------------------------------------------- 130 (246)
T 2uvd_A 131 -------------------------------------------------------------------------------- 130 (246)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.+.|+||++||..+... ..+...|++||+
T Consensus 131 -----------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK~ 159 (246)
T 2uvd_A 131 -----------QRHGRIVNIASVVGVTG----------------------------------------NPGQANYVAAKA 159 (246)
T ss_dssp -----------HTCEEEEEECCTHHHHC----------------------------------------CTTBHHHHHHHH
T ss_pred -----------cCCcEEEEECCHHhcCC----------------------------------------CCCCchHHHHHH
Confidence 11256777777665431 123346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
++..+++.++.++++. ||+||+|+||+|+|++.... .+...+......|++|++.
T Consensus 160 a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~p~~~~~~ 214 (246)
T 2uvd_A 160 GVIGLTKTSAKELASR----NITVNAIAPGFIATDMTDVL---DENIKAEMLKLIPAAQFGE 214 (246)
T ss_dssp HHHHHHHHHHHHHGGG----TEEEEEEEECSBGGGCSSCC---CTTHHHHHHHTCTTCSCBC
T ss_pred HHHHHHHHHHHHhhhc----CeEEEEEEeccccCcchhhc---CHHHHHHHHhcCCCCCCcC
Confidence 9999999999998876 99999999999999987652 2222222333456666543
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=199.61 Aligned_cols=161 Identities=17% Similarity=0.167 Sum_probs=123.1
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.+++||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 60 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---- 135 (266)
T 3p19_A 60 NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKA---- 135 (266)
T ss_dssp TEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH----
T ss_pred CceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh----
Confidence 578899999999999999999999999999999999998777776666 888888888888887777777776643
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 136 -------------------------------------------------------------------------------- 135 (266)
T 3p19_A 136 -------------------------------------------------------------------------------- 135 (266)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
++.|+||++||.++.. +..+..+|++||+|+..
T Consensus 136 -------~~~g~IV~isS~~~~~----------------------------------------~~~~~~~Y~asK~a~~~ 168 (266)
T 3p19_A 136 -------RNCGTIINISSIAGKK----------------------------------------TFPDHAAYCGTKFAVHA 168 (266)
T ss_dssp -------HTCCEEEEECCGGGTS----------------------------------------CCTTCHHHHHHHHHHHH
T ss_pred -------cCCcEEEEEcChhhCC----------------------------------------CCCCCchHHHHHHHHHH
Confidence 1236677777766654 12233569999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhh-hhhhcccCCcc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQ-KIYLLKRTNKF 307 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~l~r~~~~ 307 (313)
|++.++.++++. ||+||+|+||+|+|++..... ......... ...|++|++..
T Consensus 169 ~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~r~~~p 222 (266)
T 3p19_A 169 ISENVREEVAAS----NVRVMTIAPSAVKTELLSHTT--SQQIKDGYDAWRVDMGGVLAA 222 (266)
T ss_dssp HHHHHHHHHGGG----TCEEEEEEECSBSSSGGGGCS--CHHHHHHHHHHHHHTTCCBCH
T ss_pred HHHHHHHHhccc----CcEEEEEeeCccccchhhccc--chhhhHHHHhhcccccCCCCH
Confidence 999999999876 999999999999999977642 211111121 13467776543
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.7e-25 Score=203.06 Aligned_cols=160 Identities=14% Similarity=0.064 Sum_probs=122.7
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC----CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD----TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~----~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.+++||++|+++++++++.+.+++|+||+||||||+... .++.+.+ ++|++.+++|+.+++.++|++.|.|++
T Consensus 81 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 160 (296)
T 3k31_A 81 VKLTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN 160 (296)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT
T ss_pred CeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 46789999999999999999999999999999999999864 4555555 899999988888888888887777766
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
+|+||++||
T Consensus 161 ~g~IV~isS----------------------------------------------------------------------- 169 (296)
T 3k31_A 161 GGSILTLSY----------------------------------------------------------------------- 169 (296)
T ss_dssp CEEEEEEEC-----------------------------------------------------------------------
T ss_pred CCEEEEEEe-----------------------------------------------------------------------
Confidence 555555555
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
..+.. +..+...|++||+
T Consensus 170 ----------------------~~~~~----------------------------------------~~~~~~~Y~asKa 187 (296)
T 3k31_A 170 ----------------------YGAEK----------------------------------------VVPHYNVMGVCKA 187 (296)
T ss_dssp ----------------------GGGTS----------------------------------------CCTTTTHHHHHHH
T ss_pred ----------------------hhhcc----------------------------------------CCCCchhhHHHHH
Confidence 44432 1223356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+..|++.++.+++++ ||+||+|+||+|+|++..... ..++..+......|++|+++.
T Consensus 188 al~~l~~~la~e~~~~----gIrvn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~~r~~~p 245 (296)
T 3k31_A 188 ALEASVKYLAVDLGKQ----QIRVNAISAGPVRTLASSGIS-DFHYILTWNKYNSPLRRNTTL 245 (296)
T ss_dssp HHHHHHHHHHHHHHTT----TEEEEEEEECCCCCSSCCSCH-HHHHHHHHHHHHSTTSSCCCH
T ss_pred HHHHHHHHHHHHHhhc----CcEEEEEEECCCcCchhhccc-chHHHHHHHHhcCCCCCCCCH
Confidence 9999999999999876 999999999999999976531 011222334455677776653
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.8e-25 Score=201.59 Aligned_cols=145 Identities=23% Similarity=0.220 Sum_probs=116.1
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
+..+.++.+++||++|+++++++++.+.+++|+||+||||||+.... ++.+++ ++|++++++|+.+++.++|++.|.|
T Consensus 72 ~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 151 (286)
T 3uve_A 72 KGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHM 151 (286)
T ss_dssp HTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34577899999999999999999999999999999999999997765 355555 7888888777777777777777766
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++.
T Consensus 152 ~~~----------------------------------------------------------------------------- 154 (286)
T 3uve_A 152 IAG----------------------------------------------------------------------------- 154 (286)
T ss_dssp HHH-----------------------------------------------------------------------------
T ss_pred HhC-----------------------------------------------------------------------------
Confidence 431
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
.++|+||++||..+.. +..+...|++|
T Consensus 155 -------------~~~g~iv~isS~~~~~----------------------------------------~~~~~~~Y~as 181 (286)
T 3uve_A 155 -------------GRGGSIILTSSVGGLK----------------------------------------AYPHTGHYVAA 181 (286)
T ss_dssp -------------TSCEEEEEECCGGGTS----------------------------------------CCTTCHHHHHH
T ss_pred -------------CCCcEEEEECchhhcc----------------------------------------CCCCccHHHHH
Confidence 0135667777766654 12334569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|+|+..|++.++.+++++ ||+||+|+||+|+|+|.+.
T Consensus 182 Kaa~~~~~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~ 218 (286)
T 3uve_A 182 KHGVVGLMRAFGVELGQH----MIRVNSVHPTHVKTPMLHN 218 (286)
T ss_dssp HHHHHHHHHHHHHHHGGG----TEEEEEEEESSBSSTTTSS
T ss_pred HHHHHHHHHHHHHHhccc----CeEEEEEecCcccCCcccc
Confidence 999999999999999877 9999999999999999753
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=7.4e-25 Score=201.35 Aligned_cols=145 Identities=24% Similarity=0.268 Sum_probs=117.3
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.+++||++|+++++++++.+.+++|+||+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|+
T Consensus 73 ~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 152 (280)
T 3pgx_A 73 EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMI 152 (280)
T ss_dssp HTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 45577899999999999999999999999999999999999998766666665 88888888887777777777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 153 ~~------------------------------------------------------------------------------ 154 (280)
T 3pgx_A 153 EA------------------------------------------------------------------------------ 154 (280)
T ss_dssp HH------------------------------------------------------------------------------
T ss_pred hc------------------------------------------------------------------------------
Confidence 31
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
.++|+||++||..+... ..+..+|++||
T Consensus 155 ------------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 182 (280)
T 3pgx_A 155 ------------GNGGSIVVVSSSAGLKA----------------------------------------TPGNGHYSASK 182 (280)
T ss_dssp ------------CSCEEEEEECCGGGTSC----------------------------------------CTTBHHHHHHH
T ss_pred ------------CCCCEEEEEcchhhccC----------------------------------------CCCchhHHHHH
Confidence 01356777777666541 22335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+|+..|++.++.+++++ ||+||+|+||+|+|++.+.
T Consensus 183 aa~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~ 218 (280)
T 3pgx_A 183 HGLTALTNTLAIELGEY----GIRVNSIHPYSVETPMIEP 218 (280)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSTTCCH
T ss_pred HHHHHHHHHHHHHhhhc----CeEEEEEeeCcccCcccch
Confidence 99999999999999877 9999999999999998653
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-25 Score=201.23 Aligned_cols=167 Identities=19% Similarity=0.151 Sum_probs=123.6
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCC-CCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIY-RDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~-~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
++.+.++.+++||++|+++++++++.+.+++|++|+||||||+. ...++.+.+ ++|++++++|+.+++.++|++.|.|
T Consensus 56 ~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 135 (264)
T 3ucx_A 56 TDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPAL 135 (264)
T ss_dssp HHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHH
T ss_pred HhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34577899999999999999999999999999999999999986 334555555 7777777777777766666666655
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++
T Consensus 136 ~~------------------------------------------------------------------------------ 137 (264)
T 3ucx_A 136 EE------------------------------------------------------------------------------ 137 (264)
T ss_dssp HH------------------------------------------------------------------------------
T ss_pred HH------------------------------------------------------------------------------
Confidence 33
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
.+|+||++||..+... ..+..+|++|
T Consensus 138 --------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~as 163 (264)
T 3ucx_A 138 --------------SKGAVVNVNSMVVRHS----------------------------------------QAKYGAYKMA 163 (264)
T ss_dssp --------------HTCEEEEECCGGGGCC----------------------------------------CTTCHHHHHH
T ss_pred --------------cCCEEEEECcchhccC----------------------------------------CCccHHHHHH
Confidence 1366777777666541 2334569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccC--------CCCcchhhhhhhhhhcccCCcc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG--------VLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~--------~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+|+..|++.++.+++++ ||+||+|+||+|+|++.+... ...++..+......|++|+++.
T Consensus 164 Kaa~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 232 (264)
T 3ucx_A 164 KSALLAMSQTLATELGEK----GIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTE 232 (264)
T ss_dssp HHHHHHHHHHHHHHHHTT----TCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBH
T ss_pred HHHHHHHHHHHHHHhCcc----CeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCH
Confidence 999999999999998876 999999999999999865421 0112222333455677776654
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.7e-25 Score=200.20 Aligned_cols=143 Identities=10% Similarity=0.101 Sum_probs=106.6
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.+++||++|+++++++++.+.++ |++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|+
T Consensus 52 ~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 130 (252)
T 3h7a_A 52 EAAGGRIVARSLDARNEDEVTAFLNAADAH-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLML 130 (252)
T ss_dssp HHTTCEEEEEECCTTCHHHHHHHHHHHHHH-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCeEEEEECcCCCHHHHHHHHHHHHhh-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 345778999999999999999999999999 9999999999998876666665 88888887777777777777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 131 ~------------------------------------------------------------------------------- 131 (252)
T 3h7a_A 131 A------------------------------------------------------------------------------- 131 (252)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+++|+||++||..+.. +..+..+|++||
T Consensus 132 ------------~~~g~iv~isS~~~~~----------------------------------------~~~~~~~Y~asK 159 (252)
T 3h7a_A 132 ------------HGQGKIFFTGATASLR----------------------------------------GGSGFAAFASAK 159 (252)
T ss_dssp ------------HTCEEEEEEEEGGGTC----------------------------------------CCTTCHHHHHHH
T ss_pred ------------cCCcEEEEECCHHHcC----------------------------------------CCCCCccHHHHH
Confidence 1125566666666544 122345699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEE-Eeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIV-NPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~v-n~v~PG~v~T~~~~~ 283 (313)
+|+..|++.++.++++. ||+| |+|+||+|+|++.+.
T Consensus 160 aa~~~l~~~la~e~~~~----gi~v~n~v~PG~v~T~~~~~ 196 (252)
T 3h7a_A 160 FGLRAVAQSMARELMPK----NIHVAHLIIDSGVDTAWVRE 196 (252)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEEC----------
T ss_pred HHHHHHHHHHHHHhhhc----CCEEEEEecCCccCChhhhc
Confidence 99999999999999877 9999 999999999999765
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=202.24 Aligned_cols=145 Identities=21% Similarity=0.196 Sum_probs=117.9
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC-CCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA-PGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~-~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
++.+.++.+++||++|.++++++++.+.+++|+||+||||||+..... +.+++ ++|++++++|+.+++.++|++.|.|
T Consensus 85 ~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 164 (299)
T 3t7c_A 85 EALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHI 164 (299)
T ss_dssp HHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 456788999999999999999999999999999999999999987653 66665 8888888888888888888777765
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++.
T Consensus 165 ~~~----------------------------------------------------------------------------- 167 (299)
T 3t7c_A 165 MAG----------------------------------------------------------------------------- 167 (299)
T ss_dssp HHT-----------------------------------------------------------------------------
T ss_pred Hhc-----------------------------------------------------------------------------
Confidence 331
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
+++|+||++||..+... ..+..+|++|
T Consensus 168 -------------~~~g~Iv~isS~~~~~~----------------------------------------~~~~~~Y~as 194 (299)
T 3t7c_A 168 -------------KRGGSIVFTSSIGGLRG----------------------------------------AENIGNYIAS 194 (299)
T ss_dssp -------------TSCEEEEEECCGGGTSC----------------------------------------CTTCHHHHHH
T ss_pred -------------CCCcEEEEECChhhccC----------------------------------------CCCcchHHHH
Confidence 11356777777666541 2234569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|+|+..|++.++.++++. ||+||+|+||+|+|+|...
T Consensus 195 Kaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~ 231 (299)
T 3t7c_A 195 KHGLHGLMRTMALELGPR----NIRVNIVCPSSVATPMLLN 231 (299)
T ss_dssp HHHHHHHHHHHHHHHGGG----TEEEEEEEESCBSSTTTSS
T ss_pred HHHHHHHHHHHHHHhccc----CcEEEEEecCCccCccccc
Confidence 999999999999999877 9999999999999999753
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.2e-25 Score=202.61 Aligned_cols=141 Identities=26% Similarity=0.384 Sum_probs=111.8
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.+++||++|.++++++++.+.+++|++|+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|++
T Consensus 75 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-- 152 (281)
T 3v2h_A 75 SGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKK-- 152 (281)
T ss_dssp SSCEEEECCCTTCHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--
Confidence 67889999999999999999999999999999999999998776666665 888888877777777777777776643
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 153 -------------------------------------------------------------------------------- 152 (281)
T 3v2h_A 153 -------------------------------------------------------------------------------- 152 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
++.|+||++||..+... ..+..+|++||+|+
T Consensus 153 ---------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asKaa~ 183 (281)
T 3v2h_A 153 ---------KGWGRIINIASAHGLVA----------------------------------------SPFKSAYVAAKHGI 183 (281)
T ss_dssp ---------HTCEEEEEECCGGGTSC----------------------------------------CTTCHHHHHHHHHH
T ss_pred ---------cCCCEEEEECCcccccC----------------------------------------CCCchHHHHHHHHH
Confidence 12256777777666541 22335699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..|++.++.++++. ||+||+|+||+|+|++.+.
T Consensus 184 ~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~~~~ 216 (281)
T 3v2h_A 184 MGLTKTVALEVAES----GVTVNSICPGYVLTPLVEK 216 (281)
T ss_dssp HHHHHHHHHHHGGG----TEEEEEEEECSBCC-----
T ss_pred HHHHHHHHHHhhhc----CcEEEEEECCCCcCcchhh
Confidence 99999999999877 9999999999999999765
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=195.88 Aligned_cols=165 Identities=24% Similarity=0.311 Sum_probs=126.1
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
+++.+.++.+++||++|.++++++++.+.+++|++|+||||||+.....+.+.+ ++|++.+++|+.+++.+++++.|.|
T Consensus 49 ~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 128 (247)
T 3lyl_A 49 MKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGM 128 (247)
T ss_dssp HHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 344577899999999999999999999999999999999999998776665555 7788888777777777777766655
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++
T Consensus 129 ~~------------------------------------------------------------------------------ 130 (247)
T 3lyl_A 129 MK------------------------------------------------------------------------------ 130 (247)
T ss_dssp HH------------------------------------------------------------------------------
T ss_pred HH------------------------------------------------------------------------------
Confidence 33
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
++.|+||++||..+... ..+...|++|
T Consensus 131 -------------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~s 157 (247)
T 3lyl_A 131 -------------KRWGRIISIGSVVGSAG----------------------------------------NPGQTNYCAA 157 (247)
T ss_dssp -------------HTCEEEEEECCTHHHHC----------------------------------------CTTCHHHHHH
T ss_pred -------------cCCeEEEEEcchhhccC----------------------------------------CCCcHHHHHH
Confidence 12366777777766541 2234569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
|+|+..|++.++.++++. ||+||+|+||+|+|++.+.. .++.........|++|+++
T Consensus 158 K~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~ 214 (247)
T 3lyl_A 158 KAGVIGFSKSLAYEVASR----NITVNVVAPGFIATDMTDKL---TDEQKSFIATKIPSGQIGE 214 (247)
T ss_dssp HHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCTTTTTS---CHHHHHHHHTTSTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHc----CeEEEEEeeCcEecccchhc---cHHHHHHHhhcCCCCCCcC
Confidence 999999999999998876 99999999999999997763 3333333444456666544
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=201.16 Aligned_cols=160 Identities=16% Similarity=0.142 Sum_probs=125.4
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.+++||++|.++++++++.+.+++|+||+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|++
T Consensus 62 ~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 141 (285)
T 3sc4_A 62 EAGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKG 141 (285)
T ss_dssp HHTSEEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTT
T ss_pred hcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999999998877777766 888888888888888888877777754
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 142 ~------------------------------------------------------------------------------- 142 (285)
T 3sc4_A 142 R------------------------------------------------------------------------------- 142 (285)
T ss_dssp S-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
++|+||++||..+.... ..+..+|++||+
T Consensus 143 ------------~~g~iv~isS~~~~~~~---------------------------------------~~~~~~Y~asKa 171 (285)
T 3sc4_A 143 ------------DNPHILTLSPPIRLEPK---------------------------------------WLRPTPYMMAKY 171 (285)
T ss_dssp ------------SSCEEEECCCCCCCSGG---------------------------------------GSCSHHHHHHHH
T ss_pred ------------CCcEEEEECChhhccCC---------------------------------------CCCCchHHHHHH
Confidence 23677777777665421 022356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeeccc-cccccccccc--------CCCCcchhhhhhhhh
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPG-YVNTDLTEHK--------GVLTPEQGKIRQKIY 299 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG-~v~T~~~~~~--------~~~~~~~~~~~~~~~ 299 (313)
|+..|++.++.++++. ||+||+|+|| ++.|++.+.. ...+|++.+....++
T Consensus 172 al~~~~~~la~e~~~~----gI~vn~v~PG~~v~t~~~~~~~~~~~~~~r~~~pedvA~~~~~l 231 (285)
T 3sc4_A 172 GMTLCALGIAEELRDA----GIASNTLWPRTTVATAAVQNLLGGDEAMARSRKPEVYADAAYVV 231 (285)
T ss_dssp HHHHHHHHHHHHTGGG----TCEEEEEECSSCBCCHHHHHHHTSCCCCTTCBCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccc----CcEEEEEeCCCccccHHHHhhccccccccCCCCHHHHHHHHHHH
Confidence 9999999999998876 9999999999 6999986542 123555655554443
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=7.9e-25 Score=199.31 Aligned_cols=143 Identities=21% Similarity=0.232 Sum_probs=113.3
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCC-CCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIY-RDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~-~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+.+.++.+++||++|+++++++++.+.+++|++|+||||||+. ...++.+.+ ++|++++++|+.+++.++|++.|.|+
T Consensus 53 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 132 (262)
T 1zem_A 53 EKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMI 132 (262)
T ss_dssp TTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred hcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3467788999999999999999999999999999999999987 444555555 77888887777777777777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 133 ~------------------------------------------------------------------------------- 133 (262)
T 1zem_A 133 T------------------------------------------------------------------------------- 133 (262)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++.|+||++||..+... ..+..+|++||
T Consensus 134 ------------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 161 (262)
T 1zem_A 134 ------------QNYGRIVNTASMAGVKG----------------------------------------PPNMAAYGTSK 161 (262)
T ss_dssp ------------HTCEEEEEECCHHHHSC----------------------------------------CTTBHHHHHHH
T ss_pred ------------cCCcEEEEEcchhhccC----------------------------------------CCCCchHHHHH
Confidence 11256666666655431 12334699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+|+..|++.++.++++. ||+||+|+||+|+|++...
T Consensus 162 ~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~ 197 (262)
T 1zem_A 162 GAIIALTETAALDLAPY----NIRVNAISPGYMGPGFMWE 197 (262)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSSHHHH
T ss_pred HHHHHHHHHHHHHHHhh----CeEEEEEecCCcCcchhhh
Confidence 99999999999998876 9999999999999998654
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-24 Score=198.78 Aligned_cols=145 Identities=24% Similarity=0.380 Sum_probs=117.1
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.++.||++|.++++++++.+.+++|+||+||||||+....++.+.+ ++|++++++|+.+++.+++++.|.|+
T Consensus 71 ~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 150 (269)
T 3gk3_A 71 RDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMV 150 (269)
T ss_dssp HTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999998776666665 88888888777777777777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 151 ~------------------------------------------------------------------------------- 151 (269)
T 3gk3_A 151 E------------------------------------------------------------------------------- 151 (269)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++.|+||++||..+.. +..+...|++||
T Consensus 152 ------------~~~g~iv~isS~~~~~----------------------------------------~~~~~~~Y~asK 179 (269)
T 3gk3_A 152 ------------RRFGRIVNIGSVNGSR----------------------------------------GAFGQANYASAK 179 (269)
T ss_dssp ------------HTCEEEEEECCHHHHH----------------------------------------CCTTBHHHHHHH
T ss_pred ------------cCCCEEEEeCChhhcc----------------------------------------CCCCcchHHHHH
Confidence 1225666666666544 123345699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
+|+..|++.++.++++. ||+||+|+||+|+|++.+..
T Consensus 180 aa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~ 216 (269)
T 3gk3_A 180 AGIHGFTKTLALETAKR----GITVNTVSPGYLATAMVEAV 216 (269)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCTTTTC-
T ss_pred HHHHHHHHHHHHHhhhc----CCEEEEEecCcccchhhhhh
Confidence 99999999999999876 99999999999999997763
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.91 E-value=7e-25 Score=201.64 Aligned_cols=146 Identities=16% Similarity=0.188 Sum_probs=111.7
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+.+.++.+++||++|+++++++++.+.+++|+||+||||||+... .++.+++ ++|++++++|+.+++.++|++.|.|+
T Consensus 71 ~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 150 (272)
T 4dyv_A 71 EIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMK 150 (272)
T ss_dssp HHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 445678899999999999999999999999999999999999754 4555555 88888888888888777777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.+
T Consensus 151 ~~~----------------------------------------------------------------------------- 153 (272)
T 4dyv_A 151 AQE----------------------------------------------------------------------------- 153 (272)
T ss_dssp HSS-----------------------------------------------------------------------------
T ss_pred hCC-----------------------------------------------------------------------------
Confidence 310
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
.++|+||++||..+... ..+..+|++||
T Consensus 154 ------------~~~g~IV~isS~~~~~~----------------------------------------~~~~~~Y~asK 181 (272)
T 4dyv_A 154 ------------PRGGRIINNGSISATSP----------------------------------------RPYSAPYTATK 181 (272)
T ss_dssp ------------SCCEEEEEECCSSTTSC----------------------------------------CTTCHHHHHHH
T ss_pred ------------CCCcEEEEECchhhcCC----------------------------------------CCCchHHHHHH
Confidence 01367777777776541 22335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
+|+..|++.++.+++.. ||+||+|+||+|+|++.+..
T Consensus 182 aa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~ 218 (272)
T 4dyv_A 182 HAITGLTKSTSLDGRVH----DIACGQIDIGNADTPMAQKM 218 (272)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEEEECC-------
T ss_pred HHHHHHHHHHHHHhCcc----CEEEEEEEECcccChhhhhh
Confidence 99999999999998876 99999999999999997653
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.6e-25 Score=200.33 Aligned_cols=160 Identities=16% Similarity=0.175 Sum_probs=119.1
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.+++||++|+++++++++.+.+++|+||+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 60 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~- 138 (274)
T 3e03_A 60 AGGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQ- 138 (274)
T ss_dssp HTSEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTT-
T ss_pred cCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHh-
Confidence 367889999999999999999999999999999999999998766666655 888888877777777777777776654
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 139 -------------------------------------------------------------------------------- 138 (274)
T 3e03_A 139 -------------------------------------------------------------------------------- 138 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+++|+||++||..+..... ..+..+|++||+|
T Consensus 139 ----------~~~g~iv~isS~~~~~~~~--------------------------------------~~~~~~Y~asKaa 170 (274)
T 3e03_A 139 ----------APNPHILTLAPPPSLNPAW--------------------------------------WGAHTGYTLAKMG 170 (274)
T ss_dssp ----------SSSCEEEECCCCCCCCHHH--------------------------------------HHHCHHHHHHHHH
T ss_pred ----------cCCceEEEECChHhcCCCC--------------------------------------CCCCchHHHHHHH
Confidence 1236677777766654100 0122469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeeccc-ccccccccccC------CCCcchhhhhhhhh
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPG-YVNTDLTEHKG------VLTPEQGKIRQKIY 299 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG-~v~T~~~~~~~------~~~~~~~~~~~~~~ 299 (313)
+..|++.++.+++++ ||+||+|+|| +++|++..... ..+|++.+....++
T Consensus 171 l~~l~~~la~e~~~~----gI~vn~v~PG~~v~T~~~~~~~~~~~~~~~~pedvA~~v~~l 227 (274)
T 3e03_A 171 MSLVTLGLAAEFGPQ----GVAINALWPRTVIATDAINMLPGVDAAACRRPEIMADAAHAV 227 (274)
T ss_dssp HHHHHHHHHHHHGGG----TCEEEEEECSBCBCC-------CCCGGGSBCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhc----CEEEEEEECCcccccchhhhcccccccccCCHHHHHHHHHHH
Confidence 999999999999877 9999999999 69999875432 23456655554444
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-24 Score=193.84 Aligned_cols=142 Identities=25% Similarity=0.341 Sum_probs=114.7
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.+++||++|+++++++++.+.+++|++|+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|++
T Consensus 53 ~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 132 (247)
T 2jah_A 53 AAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLR 132 (247)
T ss_dssp HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3467789999999999999999999999999999999999998766666665 888888877777777777777666533
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 133 -------------------------------------------------------------------------------- 132 (247)
T 2jah_A 133 -------------------------------------------------------------------------------- 132 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.+|+||++||..+... ..+...|++||+
T Consensus 133 ------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK~ 160 (247)
T 2jah_A 133 ------------SKGTVVQMSSIAGRVN----------------------------------------VRNAAVYQATKF 160 (247)
T ss_dssp ------------HTCEEEEECCGGGTCC----------------------------------------CTTCHHHHHHHH
T ss_pred ------------CCCEEEEEccHHhcCC----------------------------------------CCCCcHHHHHHH
Confidence 1256666666665431 223346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|+..|++.++.++++. ||+||+|+||+|+|++...
T Consensus 161 a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~ 195 (247)
T 2jah_A 161 GVNAFSETLRQEVTER----GVRVVVIEPGTTDTELRGH 195 (247)
T ss_dssp HHHHHHHHHHHHHGGG----TCEEEEEEECSBSSSGGGG
T ss_pred HHHHHHHHHHHHhccc----CcEEEEEECCCCCCcchhc
Confidence 9999999999998876 9999999999999999765
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-24 Score=197.50 Aligned_cols=143 Identities=23% Similarity=0.259 Sum_probs=114.3
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.+++||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 50 ~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 129 (258)
T 3a28_C 50 AADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDE 129 (258)
T ss_dssp TTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 3467889999999999999999999999999999999999998766665555 788888877777777777777766643
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 130 -------------------------------------------------------------------------------- 129 (258)
T 3a28_C 130 -------------------------------------------------------------------------------- 129 (258)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCC-CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 165 VTVCHILFPLLRPH-ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 165 ~~~~~~~~p~l~~~-g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++. |+||++||..+... ..+..+|++||
T Consensus 130 -----------~~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK 158 (258)
T 3a28_C 130 -----------LGVKGKIINAASIAAIQG----------------------------------------FPILSAYSTTK 158 (258)
T ss_dssp -----------HTCCCEEEEECCGGGTSC----------------------------------------CTTCHHHHHHH
T ss_pred -----------cCCCcEEEEECcchhccC----------------------------------------CCCchhHHHHH
Confidence 112 56666666665431 22335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+++..|++.++.++++. ||+||+|+||+|+|++...
T Consensus 159 ~a~~~~~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~ 194 (258)
T 3a28_C 159 FAVRGLTQAAAQELAPK----GHTVNAYAPGIVGTGMWEQ 194 (258)
T ss_dssp HHHHHHHHHHHHHHGGG----TCEEEEEEECCBCSHHHHH
T ss_pred HHHHHHHHHHHHHHHhh----CeEEEEEECCccCChhhhh
Confidence 99999999999998876 9999999999999998654
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=195.88 Aligned_cols=143 Identities=23% Similarity=0.269 Sum_probs=109.3
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.+++||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|+
T Consensus 50 ~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 129 (249)
T 2ew8_A 50 RNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMK 129 (249)
T ss_dssp HHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34567789999999999999999999999999999999999998766655555 77888887777777777777766664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 130 ~------------------------------------------------------------------------------- 130 (249)
T 2ew8_A 130 R------------------------------------------------------------------------------- 130 (249)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred H-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
.+.|+||++||..+... ..+...|++||
T Consensus 131 ------------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 158 (249)
T 2ew8_A 131 ------------NGWGRIINLTSTTYWLK----------------------------------------IEAYTHYISTK 158 (249)
T ss_dssp ------------HTCEEEEEECCGGGGSC----------------------------------------CSSCHHHHHHH
T ss_pred ------------cCCeEEEEEcchhhccC----------------------------------------CCCchhHHHHH
Confidence 11256667766666431 22334699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+|+..+++.++.++++. ||+||+|+||+|+|++.+
T Consensus 159 ~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~ 193 (249)
T 2ew8_A 159 AANIGFTRALASDLGKD----GITVNAIAPSLVRTATTE 193 (249)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECCC------
T ss_pred HHHHHHHHHHHHHHHhc----CcEEEEEecCcCcCccch
Confidence 99999999999998876 999999999999999866
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=195.79 Aligned_cols=156 Identities=17% Similarity=0.164 Sum_probs=114.2
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.+++||++|+++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++.
T Consensus 48 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~- 126 (235)
T 3l6e_A 48 GNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER- 126 (235)
T ss_dssp GGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-
T ss_pred cCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-
Confidence 34588899999999999999999999999999999999998766666665 8888888888888888777777766441
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 127 -------------------------------------------------------------------------------- 126 (235)
T 3l6e_A 127 -------------------------------------------------------------------------------- 126 (235)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+|+||++||..+... ..+..+|++||+|+
T Consensus 127 -----------~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~asKaa~ 155 (235)
T 3l6e_A 127 -----------GGVLANVLSSAAQVG----------------------------------------KANESLYCASKWGM 155 (235)
T ss_dssp -----------CEEEEEECCEECCSS----------------------------------------CSSHHHHHHHHHHH
T ss_pred -----------CCEEEEEeCHHhcCC----------------------------------------CCCCcHHHHHHHHH
Confidence 235566666555431 12334699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc------CCCCcchhhhhhhhh
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK------GVLTPEQGKIRQKIY 299 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~------~~~~~~~~~~~~~~~ 299 (313)
..|++.++.++++. ||+||+|+||+|+|++.... ...+|++.+....++
T Consensus 156 ~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~pedvA~~v~~l 210 (235)
T 3l6e_A 156 RGFLESLRAELKDS----PLRLVNLYPSGIRSEFWDNTDHVDPSGFMTPEDAAAYMLDA 210 (235)
T ss_dssp HHHHHHHHHHTTTS----SEEEEEEEEEEECCCC-----------CBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcc----CCEEEEEeCCCccCcchhccCCCCCcCCCCHHHHHHHHHHH
Confidence 99999999988765 99999999999999997653 234556655554444
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-24 Score=197.17 Aligned_cols=167 Identities=26% Similarity=0.281 Sum_probs=119.5
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHc-CCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQH-GGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~-g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+.+.++.+++||++|+++++++++.+.+.+ |++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|+
T Consensus 67 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~ 146 (273)
T 1ae1_A 67 EKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLK 146 (273)
T ss_dssp HTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 346778999999999999999999999999 9999999999998766666665 88888888888777777777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 147 ~------------------------------------------------------------------------------- 147 (273)
T 1ae1_A 147 A------------------------------------------------------------------------------- 147 (273)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++.|+||++||..+... ..+...|++||
T Consensus 148 ------------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 175 (273)
T 1ae1_A 148 ------------SQNGNVIFLSSIAGFSA----------------------------------------LPSVSLYSASK 175 (273)
T ss_dssp ------------HTSEEEEEECCGGGTSC----------------------------------------CTTCHHHHHHH
T ss_pred ------------cCCcEEEEEcCHhhcCC----------------------------------------CCCcchhHHHH
Confidence 11256666666665431 12334699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCC---CcchhhhhhhhhhcccCCcc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVL---TPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~l~r~~~~ 307 (313)
+|+..+++.++.++++. ||+||+|+||+|+|++....... ..+..+......|++|+++.
T Consensus 176 ~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 238 (273)
T 1ae1_A 176 GAINQMTKSLACEWAKD----NIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKP 238 (273)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCH
T ss_pred HHHHHHHHHHHHHHhhc----CcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCH
Confidence 99999999999998876 99999999999999996543111 11122223344677776653
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-24 Score=196.03 Aligned_cols=163 Identities=20% Similarity=0.206 Sum_probs=116.6
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.+++||++|.++++++++.+.+++|+||+||||||+....++.+.+ ++|++++++|+.+++.+++++.|.|++.
T Consensus 72 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~- 150 (266)
T 3o38_A 72 LGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGV- 150 (266)
T ss_dssp SSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-
T ss_pred CCceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-
Confidence 46789999999999999999999999999999999999998776666655 8888888888888877777777766431
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 151 -------------------------------------------------------------------------------- 150 (266)
T 3o38_A 151 -------------------------------------------------------------------------------- 150 (266)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+++++||++||..+... ..+...|++||+|+
T Consensus 151 ---------~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sKaa~ 181 (266)
T 3o38_A 151 ---------DHGGVIVNNASVLGWRA----------------------------------------QHSQSHYAAAKAGV 181 (266)
T ss_dssp ---------SCCEEEEEECCGGGTCC----------------------------------------CTTCHHHHHHHHHH
T ss_pred ---------CCCeEEEEeCCHHHcCC----------------------------------------CCCCchHHHHHHHH
Confidence 02356777777666541 23345699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
..|++.++.++++. ||+||+|+||+|+|++.+... .++..+......|++|++.
T Consensus 182 ~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~r~~~ 235 (266)
T 3o38_A 182 MALTRCSAIEAVEF----GVRINAVSPSIARHKFLEKTS--SSELLDRLASDEAFGRAAE 235 (266)
T ss_dssp HHHHHHHHHHHGGG----TEEEEEEEECCCCC-------------------CCTTSSCCC
T ss_pred HHHHHHHHHHHHHc----CcEEEEEeCCcccchhhhccC--cHHHHHHHHhcCCcCCCCC
Confidence 99999999998876 999999999999999976531 2222233333445555443
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-24 Score=195.08 Aligned_cols=159 Identities=18% Similarity=0.223 Sum_probs=120.9
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.++.+++||++|+++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++.
T Consensus 68 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-- 145 (260)
T 3un1_A 68 PDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-- 145 (260)
T ss_dssp TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--
Confidence 3578899999999999999999999999999999999998776666655 8888888888888888888777766441
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 146 -------------------------------------------------------------------------------- 145 (260)
T 3un1_A 146 -------------------------------------------------------------------------------- 145 (260)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
+.|+||++||..+.... ...+...|++||+|+.
T Consensus 146 ---------~~g~iv~isS~~~~~~~--------------------------------------~~~~~~~Y~~sKaa~~ 178 (260)
T 3un1_A 146 ---------GSGHIVSITTSLVDQPM--------------------------------------VGMPSALASLTKGGLN 178 (260)
T ss_dssp ---------TCEEEEEECCTTTTSCB--------------------------------------TTCCCHHHHHHHHHHH
T ss_pred ---------CCcEEEEEechhhccCC--------------------------------------CCCccHHHHHHHHHHH
Confidence 12556666665543211 1234456999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
.|++.++.+++++ ||+||+|+||+|+||+... +.........|++|+++
T Consensus 179 ~l~~~la~e~~~~----gI~vn~v~PG~v~t~~~~~------~~~~~~~~~~p~~r~~~ 227 (260)
T 3un1_A 179 AVTRSLAMEFSRS----GVRVNAVSPGVIKTPMHPA------ETHSTLAGLHPVGRMGE 227 (260)
T ss_dssp HHHHHHHHHTTTT----TEEEEEEEECCBCCTTSCG------GGHHHHHTTSTTSSCBC
T ss_pred HHHHHHHHHhCcC----CeEEEEEeecCCCCCCCCH------HHHHHHhccCCCCCCcC
Confidence 9999999988766 9999999999999998643 22223334456666654
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-24 Score=197.71 Aligned_cols=142 Identities=20% Similarity=0.279 Sum_probs=108.8
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.++.||++|.++++++++.+.+++|+||+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|+
T Consensus 49 ~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 128 (264)
T 3tfo_A 49 RDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIME 128 (264)
T ss_dssp HHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 44577889999999999999999999999999999999999998777666665 88888888888888777777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 129 ~------------------------------------------------------------------------------- 129 (264)
T 3tfo_A 129 A------------------------------------------------------------------------------- 129 (264)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+++|+||++||..+... ..+..+|++||
T Consensus 130 ------------~~~g~IV~isS~~~~~~----------------------------------------~~~~~~Y~asK 157 (264)
T 3tfo_A 130 ------------QRSGQIINIGSIGALSV----------------------------------------VPTAAVYCATK 157 (264)
T ss_dssp ------------HTCEEEEEECCGGGTCC----------------------------------------CTTCHHHHHHH
T ss_pred ------------CCCeEEEEEcCHHHccc----------------------------------------CCCChhHHHHH
Confidence 12356666666666541 22335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+|+..|++.++.++ + ||+||+|+||+|+|+|.+.
T Consensus 158 aal~~l~~~la~e~-----~-gIrvn~v~PG~v~T~~~~~ 191 (264)
T 3tfo_A 158 FAVRAISDGLRQES-----T-NIRVTCVNPGVVESELAGT 191 (264)
T ss_dssp HHHHHHHHHHHHHC-----S-SEEEEEEEECCC-------
T ss_pred HHHHHHHHHHHHhC-----C-CCEEEEEecCCCcCccccc
Confidence 99999998888874 2 8999999999999999754
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-24 Score=195.94 Aligned_cols=165 Identities=18% Similarity=0.214 Sum_probs=126.0
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
..+.++.+++||++|.++++++++.+.+++|+||+||||||+.....+.+.+ ++|++.+++|+.+++.+++++.|.|++
T Consensus 70 ~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 149 (267)
T 3gdg_A 70 TYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKE 149 (267)
T ss_dssp HHCCCEECCBCCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 3477889999999999999999999999999999999999998877666665 888888888888877777777776643
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 150 -------------------------------------------------------------------------------- 149 (267)
T 3gdg_A 150 -------------------------------------------------------------------------------- 149 (267)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
++.|+||++||..+.... ...+..+|++||+
T Consensus 150 -----------~~~g~iv~isS~~~~~~~--------------------------------------~~~~~~~Y~~sK~ 180 (267)
T 3gdg_A 150 -----------RGTGSLVITASMSGHIAN--------------------------------------FPQEQTSYNVAKA 180 (267)
T ss_dssp -----------HTCCEEEEECCGGGTSCC--------------------------------------SSSCCHHHHHHHH
T ss_pred -----------cCCceEEEEccccccccC--------------------------------------CCCCCCcchHHHH
Confidence 123566666666654311 0113346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+..|++.++.++.+ . |+||+|+||+|+|++.+.. .++..+......|++|++..
T Consensus 181 a~~~~~~~la~e~~~----~-i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~r~~~~ 235 (267)
T 3gdg_A 181 GCIHMARSLANEWRD----F-ARVNSISPGYIDTGLSDFV---PKETQQLWHSMIPMGRDGLA 235 (267)
T ss_dssp HHHHHHHHHHHHTTT----T-CEEEEEEECCEECSCGGGS---CHHHHHHHHTTSTTSSCEET
T ss_pred HHHHHHHHHHHHhcc----C-cEEEEEECCccccchhhhC---CHHHHHHHHhcCCCCCCcCH
Confidence 999999998888753 3 9999999999999998753 44444445556677776653
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=5.6e-24 Score=194.70 Aligned_cols=142 Identities=27% Similarity=0.376 Sum_probs=114.3
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.++.||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++.
T Consensus 69 ~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 148 (267)
T 1vl8_A 69 YGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES 148 (267)
T ss_dssp HCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC
T ss_pred cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 366788999999999999999999999999999999999998766665555 7888888888888877777777766541
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 149 -------------------------------------------------------------------------------- 148 (267)
T 1vl8_A 149 -------------------------------------------------------------------------------- 148 (267)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCc-cccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKL-GMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+.|+||++||.. +.. +..+..+|++||+
T Consensus 149 -----------~~g~iv~isS~~~~~~----------------------------------------~~~~~~~Y~asK~ 177 (267)
T 1vl8_A 149 -----------DNPSIINIGSLTVEEV----------------------------------------TMPNISAYAASKG 177 (267)
T ss_dssp -----------SSCEEEEECCGGGTCC----------------------------------------CSSSCHHHHHHHH
T ss_pred -----------CCcEEEEECCcchhcc----------------------------------------CCCCChhHHHHHH
Confidence 125666666665 433 1123346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..|++.++.++++. ||+||+|+||+|+|++.+.
T Consensus 178 a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~ 212 (267)
T 1vl8_A 178 GVASLTKALAKEWGRY----GIRVNVIAPGWYRTKMTEA 212 (267)
T ss_dssp HHHHHHHHHHHHHGGG----TCEEEEEEECCBCSTTTHH
T ss_pred HHHHHHHHHHHHhccc----CeEEEEEEeccCccccccc
Confidence 9999999999998876 9999999999999998654
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.1e-24 Score=193.75 Aligned_cols=159 Identities=16% Similarity=0.072 Sum_probs=120.2
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC----CCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR----DTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~----~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
++.+++||++|.++++++++.+.+++|+||+||||||+.. ...+.+.+ ++|++.+++|+.+++.+++++.|.|++
T Consensus 60 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 139 (266)
T 3oig_A 60 DSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE 139 (266)
T ss_dssp CCEEEECCCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT
T ss_pred CceEEeCCCCCHHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC
Confidence 7899999999999999999999999999999999999976 34444554 889999988888888877777776655
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
+|+||
T Consensus 140 ~g~iv--------------------------------------------------------------------------- 144 (266)
T 3oig_A 140 GGSIV--------------------------------------------------------------------------- 144 (266)
T ss_dssp CEEEE---------------------------------------------------------------------------
T ss_pred CceEE---------------------------------------------------------------------------
Confidence 55555
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
++||..+... ..+...|++||+
T Consensus 145 ------------------~isS~~~~~~----------------------------------------~~~~~~Y~asKa 166 (266)
T 3oig_A 145 ------------------TLTYLGGELV----------------------------------------MPNYNVMGVAKA 166 (266)
T ss_dssp ------------------EEECGGGTSC----------------------------------------CTTTHHHHHHHH
T ss_pred ------------------EEeccccccc----------------------------------------CCCcchhHHHHH
Confidence 4444444331 123346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
|+..|++.++.++++. ||+||+|+||+|+|++.+.... .++.........|++|.+.
T Consensus 167 a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 223 (266)
T 3oig_A 167 SLDASVKYLAADLGKE----NIRVNSISAGPIRTLSAKGISD-FNSILKDIEERAPLRRTTT 223 (266)
T ss_dssp HHHHHHHHHHHHHGGG----TEEEEEEEECCCCSGGGTTCTT-HHHHHHHHHHHSTTSSCCC
T ss_pred HHHHHHHHHHHHHhhc----CcEEEEEecCcccccccccccc-hHHHHHHHHhcCCCCCCCC
Confidence 9999999999999876 9999999999999999776421 1222233344455555543
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=7.3e-24 Score=191.24 Aligned_cols=157 Identities=24% Similarity=0.262 Sum_probs=119.3
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
+.+++||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++.
T Consensus 51 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~---- 126 (245)
T 1uls_A 51 AHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK---- 126 (245)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT----
T ss_pred CEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----
Confidence 67889999999999999999999999999999999998766665555 8888888888888888888877777541
Q ss_pred EEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHH
Q psy2266 90 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCH 169 (313)
Q Consensus 90 ~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 169 (313)
T Consensus 127 -------------------------------------------------------------------------------- 126 (245)
T 1uls_A 127 -------------------------------------------------------------------------------- 126 (245)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHH
Q psy2266 170 ILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKL 249 (313)
Q Consensus 170 ~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l 249 (313)
+.|+||++||.. .. +..+...|++||+|+..+
T Consensus 127 -------~~g~iv~isS~~-~~----------------------------------------~~~~~~~Y~asK~a~~~~ 158 (245)
T 1uls_A 127 -------NPGSIVLTASRV-YL----------------------------------------GNLGQANYAASMAGVVGL 158 (245)
T ss_dssp -------CCEEEEEECCGG-GG----------------------------------------CCTTCHHHHHHHHHHHHH
T ss_pred -------CCCEEEEEccch-hc----------------------------------------CCCCchhHHHHHHHHHHH
Confidence 125566666655 32 112334699999999999
Q ss_pred HHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 250 SFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 250 ~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
++.++.++++. ||+||+|+||+|+|++.... .++.........|++|++.
T Consensus 159 ~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~~~~~~ 208 (245)
T 1uls_A 159 TRTLALELGRW----GIRVNTLAPGFIETRMTAKV---PEKVREKAIAATPLGRAGK 208 (245)
T ss_dssp HHHHHHHHGGG----TEEEEEEEECSBCCTTTSSS---CHHHHHHHHHTCTTCSCBC
T ss_pred HHHHHHHHhHh----CeEEEEEEeCcCcCcchhhc---CHHHHHHHHhhCCCCCCcC
Confidence 99999998876 99999999999999997642 2222222233446666543
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-24 Score=195.40 Aligned_cols=143 Identities=21% Similarity=0.265 Sum_probs=114.2
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
..+.++.+++||++|.++++++++.+.+++|++|+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|++
T Consensus 48 ~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 127 (256)
T 1geg_A 48 QAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKK 127 (256)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 3466788999999999999999999999999999999999997665665555 788888877777777777777776643
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 128 -------------------------------------------------------------------------------- 127 (256)
T 1geg_A 128 -------------------------------------------------------------------------------- 127 (256)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccC-CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 165 VTVCHILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 165 ~~~~~~~~p~l~~-~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++ .|+||++||..+... ..+...|++||
T Consensus 128 -----------~~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 156 (256)
T 1geg_A 128 -----------EGHGGKIINACSQAGHVG----------------------------------------NPELAVYSSSK 156 (256)
T ss_dssp -----------HTSCEEEEEECCGGGTSC----------------------------------------CTTBHHHHHHH
T ss_pred -----------cCCCCEEEEECchhhcCC----------------------------------------CCCchhHHHHH
Confidence 11 256667766665431 12334699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+|+..+++.++.++++. ||+||+|+||+|+|++...
T Consensus 157 ~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 192 (256)
T 1geg_A 157 FAVRGLTQTAARDLAPL----GITVNGYCPGIVKTPMWAE 192 (256)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECSBSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHc----CeEEEEEEECCCccchhhh
Confidence 99999999999998876 9999999999999998653
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-24 Score=200.74 Aligned_cols=144 Identities=26% Similarity=0.384 Sum_probs=117.5
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.+++||++|+++++++++.+.+++|+||+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|+
T Consensus 103 ~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 182 (317)
T 3oec_A 103 EEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMI 182 (317)
T ss_dssp HHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34577899999999999999999999999999999999999998877766666 88888888888888887777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 183 ~~------------------------------------------------------------------------------ 184 (317)
T 3oec_A 183 ER------------------------------------------------------------------------------ 184 (317)
T ss_dssp HT------------------------------------------------------------------------------
T ss_pred Hc------------------------------------------------------------------------------
Confidence 31
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
.++|+||++||..+... ..+..+|++||
T Consensus 185 ------------~~~g~Iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 212 (317)
T 3oec_A 185 ------------GQGGSVIFVSSTVGLRG----------------------------------------APGQSHYAASK 212 (317)
T ss_dssp ------------CSCEEEEEECCGGGSSC----------------------------------------CTTBHHHHHHH
T ss_pred ------------CCCCEEEEECcHHhcCC----------------------------------------CCCCcchHHHH
Confidence 01356677777666541 22335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+|+..|++.++.++++. ||+||+|+||+|+|++..
T Consensus 213 aa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~ 247 (317)
T 3oec_A 213 HGVQGLMLSLANEVGRH----NIRVNSVNPGAVNTEMAL 247 (317)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECSBSSHHHH
T ss_pred HHHHHHHHHHHHHHhhc----CeEEEEEecCcccCcccc
Confidence 99999999999999877 999999999999999864
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.3e-24 Score=193.03 Aligned_cols=140 Identities=22% Similarity=0.257 Sum_probs=110.9
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.++.+++||++|.++++++++.+.+++|++|+||||||+.....++...++|++++++|+.+++.++|++.|.|++
T Consensus 59 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---- 134 (250)
T 3nyw_A 59 QEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKV---- 134 (250)
T ss_dssp CCCEEEECCTTCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHH----
T ss_pred CcceEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 6788999999999999999999999999999999999998766663333888888888888887777777776643
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 135 -------------------------------------------------------------------------------- 134 (250)
T 3nyw_A 135 -------------------------------------------------------------------------------- 134 (250)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
++.|+||++||..+... ..+..+|++||+|+..
T Consensus 135 -------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asKaa~~~ 167 (250)
T 3nyw_A 135 -------QKNGYIFNVASRAAKYG----------------------------------------FADGGIYGSTKFALLG 167 (250)
T ss_dssp -------HTCEEEEEECC-----------------------------------------------CCTTHHHHHHHHHHH
T ss_pred -------CCCeEEEEEccHHhcCC----------------------------------------CCCCcchHHHHHHHHH
Confidence 12366677777666541 2234569999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|++.++.++++. ||+||+|+||+|+|+|.+.
T Consensus 168 l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~ 198 (250)
T 3nyw_A 168 LAESLYRELAPL----GIRVTTLCPGWVNTDMAKK 198 (250)
T ss_dssp HHHHHHHHHGGG----TEEEEEEEESSBCSHHHHH
T ss_pred HHHHHHHHhhhc----CcEEEEEecCcccCchhhh
Confidence 999999999876 9999999999999999764
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-24 Score=196.27 Aligned_cols=165 Identities=24% Similarity=0.291 Sum_probs=119.0
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
.++.+.++.+++||++|.++++++++.+.+++|++|+||||||+.....+.+.+ ++|++.+++|+.+++.+++++.|.|
T Consensus 74 ~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 153 (271)
T 4iin_A 74 LEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVM 153 (271)
T ss_dssp HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 345577899999999999999999999999999999999999998876665555 7788877777777777777666665
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++
T Consensus 154 ~~------------------------------------------------------------------------------ 155 (271)
T 4iin_A 154 SK------------------------------------------------------------------------------ 155 (271)
T ss_dssp HH------------------------------------------------------------------------------
T ss_pred hh------------------------------------------------------------------------------
Confidence 43
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
.+.|+||++||..+.. +..+...|++|
T Consensus 156 -------------~~~g~iv~isS~~~~~----------------------------------------~~~~~~~Y~as 182 (271)
T 4iin_A 156 -------------SRFGSVVNVASIIGER----------------------------------------GNMGQTNYSAS 182 (271)
T ss_dssp -------------HTCEEEEEECCHHHHH----------------------------------------CCTTCHHHHHH
T ss_pred -------------cCCCEEEEEechhhcC----------------------------------------CCCCchHhHHH
Confidence 1125667777666544 12334569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
|+|+..+++.++.+++.. ||+||+|+||+|+|++.+.. .++.........|++|.+.
T Consensus 183 K~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~~~~~ 239 (271)
T 4iin_A 183 KGGMIAMSKSFAYEGALR----NIRFNSVTPGFIETDMNANL---KDELKADYVKNIPLNRLGS 239 (271)
T ss_dssp HHHHHHHHHHHHHHHHTT----TEEEEEEEECSBCCC---------------CGGGCTTCSCBC
T ss_pred HHHHHHHHHHHHHHHHHh----CcEEEEEEeCcccCCchhhh---cHHHHHHHHhcCCcCCCcC
Confidence 999999999999998766 99999999999999997763 2222233334455555543
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.3e-24 Score=193.45 Aligned_cols=141 Identities=26% Similarity=0.407 Sum_probs=109.1
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.++.||++|+++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 54 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-- 131 (260)
T 1x1t_A 54 GVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKK-- 131 (260)
T ss_dssp TSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 66788899999999999999999999999999999999997766555555 778888877777777777777666643
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 132 -------------------------------------------------------------------------------- 131 (260)
T 1x1t_A 132 -------------------------------------------------------------------------------- 131 (260)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
++.|+||++||..+... ..+..+|++||+++
T Consensus 132 ---------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 162 (260)
T 1x1t_A 132 ---------QGFGRIINIASAHGLVA----------------------------------------SANKSAYVAAKHGV 162 (260)
T ss_dssp ---------HTCEEEEEECCGGGTSC----------------------------------------CTTCHHHHHHHHHH
T ss_pred ---------cCCCEEEEECcHHhCcC----------------------------------------CCCCchHHHHHHHH
Confidence 11256666666665431 22334699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+++.++.++++. ||+||+|+||+|+|++...
T Consensus 163 ~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 195 (260)
T 1x1t_A 163 VGFTKVTALETAGQ----GITANAICPGWVRTPLVEK 195 (260)
T ss_dssp HHHHHHHHHHHTTT----TEEEEEEEECCBCC-----
T ss_pred HHHHHHHHHHhccC----CEEEEEEeecCccCchHHH
Confidence 99999999988766 9999999999999999664
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-24 Score=199.33 Aligned_cols=140 Identities=26% Similarity=0.372 Sum_probs=113.4
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR-DTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~-~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
+.++.+++||++|+++++++++.+.+++|+||+||||||+.. ..++.+++ ++|++++++|+.+++.++|++.|.|++
T Consensus 86 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~- 164 (287)
T 3rku_A 86 NAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQA- 164 (287)
T ss_dssp TCEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 667899999999999999999999999999999999999876 44666665 888888888887777777777776643
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 165 -------------------------------------------------------------------------------- 164 (287)
T 3rku_A 165 -------------------------------------------------------------------------------- 164 (287)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
++.|+||++||..+.. +..+..+|++||+|
T Consensus 165 ----------~~~g~IV~isS~~~~~----------------------------------------~~~~~~~Y~asKaa 194 (287)
T 3rku_A 165 ----------KNSGDIVNLGSIAGRD----------------------------------------AYPTGSIYCASKFA 194 (287)
T ss_dssp ----------HTCCEEEEECCGGGTS----------------------------------------CCTTCHHHHHHHHH
T ss_pred ----------cCCCeEEEECChhhcC----------------------------------------CCCCCchHHHHHHH
Confidence 1236677777766654 12233569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+..|++.++.++++. ||+||+|+||+|+|++..
T Consensus 195 ~~~l~~~la~e~~~~----gIrvn~v~PG~v~T~~~~ 227 (287)
T 3rku_A 195 VGAFTDSLRKELINT----KIRVILIAPGLVETEFSL 227 (287)
T ss_dssp HHHHHHHHHHHTTTS----SCEEEEEEESCEESSHHH
T ss_pred HHHHHHHHHHHhhhc----CCEEEEEeCCcCcCcccc
Confidence 999999999888765 999999999999999853
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-24 Score=195.67 Aligned_cols=160 Identities=14% Similarity=0.093 Sum_probs=109.5
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC----CCCCC-hh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD----TAPGS-FG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~----~~~~~-~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
+++.+++||++|.++++++++.+.+++|+||+||||||+... ..+.+ .+ ++|++++++|+.+++.+++
T Consensus 64 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~------ 137 (271)
T 3ek2_A 64 GSELVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAK------ 137 (271)
T ss_dssp TCCCEEECCTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHH------
T ss_pred CCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHH------
Confidence 358889999999999999999999999999999999999764 33332 43 6666666555555555555
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
T Consensus 138 -------------------------------------------------------------------------------- 137 (271)
T 3ek2_A 138 -------------------------------------------------------------------------------- 137 (271)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
.++|.|+++|+||++||..+... ..+..+|++|
T Consensus 138 -------~~~~~~~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~as 170 (271)
T 3ek2_A 138 -------AALPMLSDDASLLTLSYLGAERA----------------------------------------IPNYNTMGLA 170 (271)
T ss_dssp -------HHGGGEEEEEEEEEEECGGGTSB----------------------------------------CTTTTHHHHH
T ss_pred -------HHHHHhccCceEEEEeccccccC----------------------------------------CCCccchhHH
Confidence 45555554566666666666441 2234569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
|+|+..|++.++.++++. ||+||+|+||+|+|++.+... ..++..+......|++|+++
T Consensus 171 Kaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 229 (271)
T 3ek2_A 171 KAALEASVRYLAVSLGAK----GVRVNAISAGPIKTLAASGIK-SFGKILDFVESNSPLKRNVT 229 (271)
T ss_dssp HHHHHHHHHHHHHHHHTT----TCEEEEEEECCC-----CCCH-HHHHHHHHHHHHSTTSSCCC
T ss_pred HHHHHHHHHHHHHHHHhc----CcEEEEEecCcccchhhhccc-chHHHHHHHHhcCCcCCCCC
Confidence 999999999999998866 999999999999999976531 01122233334455555543
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.1e-24 Score=194.86 Aligned_cols=141 Identities=22% Similarity=0.274 Sum_probs=112.5
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
+.++.+++||++|+++++++++.+.+++|++|+||||||+... .++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 63 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~- 141 (267)
T 1iy8_A 63 DAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMRE- 141 (267)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-
T ss_pred CceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-
Confidence 6678899999999999999999999999999999999999765 4555554 778888777777777777776666543
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 142 -------------------------------------------------------------------------------- 141 (267)
T 1iy8_A 142 -------------------------------------------------------------------------------- 141 (267)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
++.|+||++||..+... ..+..+|++||+|
T Consensus 142 ----------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK~a 171 (267)
T 1iy8_A 142 ----------QGSGMVVNTASVGGIRG----------------------------------------IGNQSGYAAAKHG 171 (267)
T ss_dssp ----------HTCCEEEEECCGGGTSB----------------------------------------CSSBHHHHHHHHH
T ss_pred ----------cCCCEEEEEcchhhccC----------------------------------------CCCCccHHHHHHH
Confidence 11266777777666431 2233569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.++.++++. ||+||+|+||+|+|++...
T Consensus 172 ~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 205 (267)
T 1iy8_A 172 VVGLTRNSAVEYGRY----GIRINAIAPGAIWTPMVEN 205 (267)
T ss_dssp HHHHHHHHHHHHGGG----TCEEEEEEECSBCSHHHHH
T ss_pred HHHHHHHHHHHHHhc----CeEEEEEEeCCCcCcchhc
Confidence 999999999999876 9999999999999998654
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-24 Score=198.65 Aligned_cols=141 Identities=21% Similarity=0.236 Sum_probs=109.5
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
+.+++||++|+++++++++.+.+++|+||+||||||+... .++.+++ ++|++++++|+.+++.++|++.|.|++.+
T Consensus 85 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-- 162 (281)
T 4dry_A 85 VRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQT-- 162 (281)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSS--
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--
Confidence 4889999999999999999999999999999999999754 4566655 88888888888888888887777764310
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 163 -------------------------------------------------------------------------------- 162 (281)
T 4dry_A 163 -------------------------------------------------------------------------------- 162 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
.++|+||++||..+.. +..+...|++||+|+..
T Consensus 163 -------~~~g~IV~isS~~~~~----------------------------------------~~~~~~~Y~asKaa~~~ 195 (281)
T 4dry_A 163 -------PRGGRIINNGSISAQT----------------------------------------PRPNSAPYTATKHAITG 195 (281)
T ss_dssp -------SCCEEEEEECCGGGTC----------------------------------------CCTTCHHHHHHHHHHHH
T ss_pred -------CCCcEEEEECCHHhCC----------------------------------------CCCCChhHHHHHHHHHH
Confidence 0135677777766654 12334569999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
|++.++.++++. ||+||+|+||+|+|+|.+..
T Consensus 196 l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~ 227 (281)
T 4dry_A 196 LTKSTALDGRMH----DIACGQIDIGNAATDMTARM 227 (281)
T ss_dssp HHHHHHHHHGGG----TEEEEEEEEECBCC------
T ss_pred HHHHHHHHhccc----CeEEEEEEECcCcChhhhhh
Confidence 999999998876 99999999999999997653
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.3e-24 Score=194.58 Aligned_cols=167 Identities=19% Similarity=0.190 Sum_probs=116.9
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCC----Ch-hHHHHHHHhHHHHHHHHHHHHH
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APG----SF-GQRAETTLATNFFALVTVCHIL 78 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~~~----~~-~~~~~~~~~vNl~~~i~l~ra~ 78 (313)
++.+.++.+++||++|.++++++++.+.+++|+||+||||||+.... .+. +. .++|++++++|+.+++.++|++
T Consensus 47 ~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~ 126 (281)
T 3zv4_A 47 VAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKAC 126 (281)
T ss_dssp HHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999986533 221 22 2556666666666666555555
Q ss_pred HhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhh
Q psy2266 79 FPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLA 158 (313)
Q Consensus 79 ~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~ 158 (313)
.|.|++
T Consensus 127 ~~~~~~-------------------------------------------------------------------------- 132 (281)
T 3zv4_A 127 LPALVS-------------------------------------------------------------------------- 132 (281)
T ss_dssp HHHHHH--------------------------------------------------------------------------
T ss_pred HHHHHh--------------------------------------------------------------------------
Confidence 554432
Q ss_pred cccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCc
Q psy2266 159 TNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFS 238 (313)
Q Consensus 159 ~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
++|+||++||..+... ..+..+
T Consensus 133 ------------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~ 154 (281)
T 3zv4_A 133 ------------------SRGSVVFTISNAGFYP----------------------------------------NGGGPL 154 (281)
T ss_dssp ------------------HTCEEEEECCGGGTSS----------------------------------------SSSCHH
T ss_pred ------------------cCCeEEEEecchhccC----------------------------------------CCCCch
Confidence 2366777777666541 223356
Q ss_pred hhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCC-------CcchhhhhhhhhhcccCCccc
Q psy2266 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVL-------TPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 239 Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~~~~l~r~~~~~ 308 (313)
|++||+|+..|++.++.++++ . |+||+|+||+|+|+|....... .....+......|++|+++..
T Consensus 155 Y~asKaa~~~l~~~la~e~~~----~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe 226 (281)
T 3zv4_A 155 YTATKHAVVGLVRQMAFELAP----H-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALE 226 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT----T-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGG
T ss_pred hHHHHHHHHHHHHHHHHHhcC----C-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHH
Confidence 999999999999999988863 3 9999999999999997542111 111223445567889887653
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.9e-25 Score=198.24 Aligned_cols=172 Identities=22% Similarity=0.220 Sum_probs=126.8
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC----CCChh-HHHHHHHhHHHHHHHHHHHHHH
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA----PGSFG-QRAETTLATNFFALVTVCHILF 79 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~----~~~~~-~~~~~~~~vNl~~~i~l~ra~~ 79 (313)
++.+.++.+++||++|.++++++++.+.+ +|++|+||||||+..... ..+.+ ++|++++++|+.+++.++|++.
T Consensus 48 ~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 126 (257)
T 3tl3_A 48 ADLGDRARFAAADVTDEAAVASALDLAET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAA 126 (257)
T ss_dssp HHTCTTEEEEECCTTCHHHHHHHHHHHHH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCceEEEECCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence 44577899999999999999999999877 999999999999875331 12244 8999999999999999999999
Q ss_pred hcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhc
Q psy2266 80 PLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLAT 159 (313)
Q Consensus 80 ~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~ 159 (313)
|.|++....
T Consensus 127 ~~~~~~~~~----------------------------------------------------------------------- 135 (257)
T 3tl3_A 127 ERIAKTEPV----------------------------------------------------------------------- 135 (257)
T ss_dssp HHHTTSCCC-----------------------------------------------------------------------
T ss_pred HHHHHhccc-----------------------------------------------------------------------
Confidence 988662100
Q ss_pred ccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCch
Q psy2266 160 NFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSY 239 (313)
Q Consensus 160 N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 239 (313)
.+..+++|+||++||..+.... .+..+|
T Consensus 136 ------------~~~~~~~g~iv~isS~~~~~~~----------------------------------------~~~~~Y 163 (257)
T 3tl3_A 136 ------------GPNAEERGVIINTASVAAFDGQ----------------------------------------IGQAAY 163 (257)
T ss_dssp --------------CCCCSEEEEEECCCC--CCH----------------------------------------HHHHHH
T ss_pred ------------ccccCCCcEEEEEcchhhcCCC----------------------------------------CCCccH
Confidence 0011234789999998876521 122469
Q ss_pred hhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhc-ccCCcc
Q psy2266 240 SVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLL-KRTNKF 307 (313)
Q Consensus 240 ~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l-~r~~~~ 307 (313)
++||+|+..|++.++.+++++ ||+||+|+||+|+|++.+.. .++..+......|+ +|+++.
T Consensus 164 ~asKaa~~~~~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~~r~~~p 225 (257)
T 3tl3_A 164 SASKGGVVGMTLPIARDLASH----RIRVMTIAPGLFDTPLLASL---PEEARASLGKQVPHPSRLGNP 225 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCTTC------CHHHHHHHHHTSSSSCSCBCH
T ss_pred HHHHHHHHHHHHHHHHHhccc----CcEEEEEEecCccChhhhhc---cHHHHHHHHhcCCCCCCccCH
Confidence 999999999999999999877 99999999999999997653 33333444445566 666543
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.5e-24 Score=194.34 Aligned_cols=142 Identities=27% Similarity=0.359 Sum_probs=112.9
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.++.||++|+++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 49 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~- 127 (254)
T 1hdc_A 49 LGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKD- 127 (254)
T ss_dssp TGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-
T ss_pred hCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-
Confidence 355788899999999999999999999999999999999998765555555 778888877777777777776666643
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 128 -------------------------------------------------------------------------------- 127 (254)
T 1hdc_A 128 -------------------------------------------------------------------------------- 127 (254)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
++.|+||++||..+... ..+..+|++||++
T Consensus 128 ----------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK~a 157 (254)
T 1hdc_A 128 ----------AGGGSIVNISSAAGLMG----------------------------------------LALTSSYGASKWG 157 (254)
T ss_dssp ----------HTCEEEEEECCGGGTSC----------------------------------------CTTCHHHHHHHHH
T ss_pred ----------cCCCEEEEECchhhccC----------------------------------------CCCchhHHHHHHH
Confidence 11256667766665431 1233469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.++.++++. ||+||+|+||+|.|++.+.
T Consensus 158 ~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 191 (254)
T 1hdc_A 158 VRGLSKLAAVELGTD----RIRVNSVHPGMTYTPMTAE 191 (254)
T ss_dssp HHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHH
T ss_pred HHHHHHHHHHHhhhc----CeEEEEEecccCcCccccc
Confidence 999999999998866 9999999999999998654
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=194.30 Aligned_cols=173 Identities=17% Similarity=0.103 Sum_probs=116.9
Q ss_pred cCCCceeEEEeecCCHH-----------------HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHH
Q psy2266 6 NNNNNVRFHQLDILDQS-----------------SIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATN 67 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~-----------------~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vN 67 (313)
..+.++.+++||++|.+ +++++++.+.+++|++|+||||||+....++.+++ +.++....
T Consensus 57 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~-- 134 (291)
T 1e7w_A 57 RRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVG-- 134 (291)
T ss_dssp HSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------
T ss_pred hcCCeeEEEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccc--
Confidence 34678899999999999 99999999999999999999999998665554443 11000000
Q ss_pred HHHHHHHHHHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC
Q psy2266 68 FFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG 147 (313)
Q Consensus 68 l~~~i~l~ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~ 147 (313)
...
T Consensus 135 -----------------------------------------------------------------------------~~~ 137 (291)
T 1e7w_A 135 -----------------------------------------------------------------------------DRE 137 (291)
T ss_dssp -------------------------------------------------------------------------------H
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred CcchhhhhhhhcccccHHHHHHHHhhcccC--------CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHH
Q psy2266 148 SFGQRAETTLATNFFALVTVCHILFPLLRP--------HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTD 219 (313)
Q Consensus 148 ~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~--------~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (313)
...++|+.++++|+.|++.+++.++|.|++ .|+||++||..+...
T Consensus 138 ~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~--------------------------- 190 (291)
T 1e7w_A 138 AMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP--------------------------- 190 (291)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSC---------------------------
T ss_pred ccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCC---------------------------
Confidence 001344445555555555555555555532 378999999887651
Q ss_pred HHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhh
Q psy2266 220 YVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIY 299 (313)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~ 299 (313)
..+...|++||+|+..|++.++.++++. ||+||+|+||+|+|+| + . .++..+......
T Consensus 191 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~T~~-~-~---~~~~~~~~~~~~ 248 (291)
T 1e7w_A 191 -------------LLGYTIYTMAKGALEGLTRSAALELAPL----QIRVNGVGPGLSVLVD-D-M---PPAVWEGHRSKV 248 (291)
T ss_dssp -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBCCGG-G-S---CHHHHHHHHTTC
T ss_pred -------------CCCCchhHHHHHHHHHHHHHHHHHHHhc----CeEEEEEeeCCccCCc-c-C---CHHHHHHHHhhC
Confidence 2334569999999999999999999876 9999999999999999 4 2 222223333445
Q ss_pred hcc-cCCc
Q psy2266 300 LLK-RTNK 306 (313)
Q Consensus 300 ~l~-r~~~ 306 (313)
|++ |+++
T Consensus 249 p~~~r~~~ 256 (291)
T 1e7w_A 249 PLYQRDSS 256 (291)
T ss_dssp TTTTSCBC
T ss_pred CCCCCCCC
Confidence 666 6554
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.1e-24 Score=192.17 Aligned_cols=162 Identities=20% Similarity=0.248 Sum_probs=97.6
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC---CCCCCChh-HHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR---DTAPGSFG-QRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~---~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
++.+.++.++.||++|.++++++++.+.+++|++|+||||||+.. ...+.+.+ ++|++.+++|+.+++.++|++.|
T Consensus 54 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 133 (253)
T 3qiv_A 54 VADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYK 133 (253)
T ss_dssp HHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 345778899999999999999999999999999999999999843 23444554 77888887777777777777777
Q ss_pred cccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcc
Q psy2266 81 LLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATN 160 (313)
Q Consensus 81 ~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N 160 (313)
.|++
T Consensus 134 ~~~~---------------------------------------------------------------------------- 137 (253)
T 3qiv_A 134 KMTK---------------------------------------------------------------------------- 137 (253)
T ss_dssp HHHH----------------------------------------------------------------------------
T ss_pred HHHh----------------------------------------------------------------------------
Confidence 6643
Q ss_pred cccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchh
Q psy2266 161 FFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYS 240 (313)
Q Consensus 161 ~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 240 (313)
+++|+||++||..+.. +...|+
T Consensus 138 ---------------~~~g~iv~isS~~~~~-------------------------------------------~~~~Y~ 159 (253)
T 3qiv_A 138 ---------------RGGGAIVNQSSTAAWL-------------------------------------------YSNYYG 159 (253)
T ss_dssp ---------------HTCEEEEEECC------------------------------------------------------
T ss_pred ---------------cCCCEEEEECCccccC-------------------------------------------CCchhH
Confidence 1236677777766532 223599
Q ss_pred hhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 241 VSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 241 ~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
+||+|+..|++.++.++++. ||+||+|+||+|+|++.+.. ...+.........|++|++.
T Consensus 160 asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~ 219 (253)
T 3qiv_A 160 LAKVGINGLTQQLSRELGGR----NIRINAIAPGPIDTEANRTT--TPKEMVDDIVKGLPLSRMGT 219 (253)
T ss_dssp CCHHHHHHHHHHHHHHTTTT----TEEEEEEEC---------------------------------
T ss_pred HHHHHHHHHHHHHHHHHhhc----CeEEEEEEecCCcccchhhc--CcHHHHHHHhccCCCCCCCC
Confidence 99999999999999888765 99999999999999987653 12222233334455555544
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=5.1e-24 Score=200.70 Aligned_cols=137 Identities=12% Similarity=0.193 Sum_probs=109.6
Q ss_pred eeEEEeecCCH--H------------------HHHHHHHHHHHHcCCCcEEEECCCCCC--CCCCCChh-HHHHHHHhHH
Q psy2266 11 VRFHQLDILDQ--S------------------SIHKLHDDIQTQHGGLDLLVNNAGIYR--DTAPGSFG-QRAETTLATN 67 (313)
Q Consensus 11 ~~~~~~Dvs~~--~------------------~v~~~~~~v~~~~g~iDilVnNAGi~~--~~~~~~~~-~~~~~~~~vN 67 (313)
+..+.||+++. + +++++++.+.+++|+||+||||||+.. ..++.+++ ++|++++++|
T Consensus 67 ~~~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN 146 (329)
T 3lt0_A 67 LDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKS 146 (329)
T ss_dssp EEEEECCTTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHH
T ss_pred cccccccccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHH
Confidence 67788899888 7 999999999999999999999999853 34566665 9999999888
Q ss_pred HHHHHHHHHHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC
Q psy2266 68 FFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG 147 (313)
Q Consensus 68 l~~~i~l~ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~ 147 (313)
+.+++.++|++.|.|+++
T Consensus 147 ~~g~~~l~~~~~p~m~~~-------------------------------------------------------------- 164 (329)
T 3lt0_A 147 SYSLISLCKYFVNIMKPQ-------------------------------------------------------------- 164 (329)
T ss_dssp THHHHHHHHHHGGGEEEE--------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHhhC--------------------------------------------------------------
Confidence 888887777777766554
Q ss_pred CcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhc
Q psy2266 148 SFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEG 227 (313)
Q Consensus 148 ~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (313)
|+||++||.++...
T Consensus 165 -------------------------------g~Iv~isS~~~~~~----------------------------------- 178 (329)
T 3lt0_A 165 -------------------------------SSIISLTYHASQKV----------------------------------- 178 (329)
T ss_dssp -------------------------------EEEEEEECGGGTSC-----------------------------------
T ss_pred -------------------------------CeEEEEeCccccCC-----------------------------------
Confidence 44555555554431
Q ss_pred ccccCCCCCC-chhhhHHHHHHHHHHHHhhhcc-CCCCCCeEEEeeccccccccccccc
Q psy2266 228 KDKEAGWPEF-SYSVSKLGVAKLSFIQHATLSK-DKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 228 ~~~~~~~~~~-~Y~~sK~al~~l~~~~~~~l~~-~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
..... +|++||+|+..|++.++.++++ . ||+||+|+||+|+|+|.+..
T Consensus 179 -----~~~~~~~Y~asKaal~~~~~~la~el~~~~----gI~vn~v~PG~v~T~~~~~~ 228 (329)
T 3lt0_A 179 -----VPGYGGGMSSAKAALESDTRVLAYHLGRNY----NIRINTISAGPLKSRAATAI 228 (329)
T ss_dssp -----CTTCTTTHHHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCCCCHHHHTC
T ss_pred -----CCcchHHHHHHHHHHHHHHHHHHHHhCCcc----CeEEEEEecceeechhHhhh
Confidence 12232 6999999999999999999986 6 99999999999999998764
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=9.2e-24 Score=194.31 Aligned_cols=89 Identities=15% Similarity=0.196 Sum_probs=72.9
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.++.||++|.++++++++.+.+++|++|+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|+
T Consensus 75 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 154 (283)
T 1g0o_A 75 KKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE 154 (283)
T ss_dssp HHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC
T ss_pred HHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 34577889999999999999999999999999999999999998766666665 99999998888888888888777764
Q ss_pred CCceEEEEec
Q psy2266 84 PHARVVNVAS 93 (313)
Q Consensus 84 ~~g~IV~isS 93 (313)
++++||++||
T Consensus 155 ~~g~iv~isS 164 (283)
T 1g0o_A 155 IGGRLILMGS 164 (283)
T ss_dssp TTCEEEEECC
T ss_pred cCCeEEEEec
Confidence 4444444444
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=7.6e-24 Score=192.22 Aligned_cols=145 Identities=19% Similarity=0.337 Sum_probs=111.4
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCC--CCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI--YRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi--~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
++.+.++.+++||++|.++++++++.+.+++|++|+||||||+ ....++.+.+ ++|++.+++|+.+++.+++++.|.
T Consensus 53 ~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 132 (264)
T 3i4f_A 53 KDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPV 132 (264)
T ss_dssp GGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 3456678999999999999999999999999999999999994 3334555554 777888777777777777777666
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++.
T Consensus 133 ~~~~---------------------------------------------------------------------------- 136 (264)
T 3i4f_A 133 MRKQ---------------------------------------------------------------------------- 136 (264)
T ss_dssp HHHH----------------------------------------------------------------------------
T ss_pred HHhc----------------------------------------------------------------------------
Confidence 6431
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccc-cccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYS 240 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 240 (313)
+.|+||++||..+. .. +..+..+|+
T Consensus 137 ---------------~~g~iv~iss~~~~~~~---------------------------------------~~~~~~~Y~ 162 (264)
T 3i4f_A 137 ---------------NFGRIINYGFQGADSAP---------------------------------------GWIYRSAFA 162 (264)
T ss_dssp ---------------TCEEEEEECCTTGGGCC---------------------------------------CCTTCHHHH
T ss_pred ---------------CCCeEEEEeechhcccC---------------------------------------CCCCCchhH
Confidence 12556666665222 11 112334699
Q ss_pred hhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 241 VSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 241 ~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+||+|+..|++.++.++++. ||+||+|+||+|.|++.+.
T Consensus 163 asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 201 (264)
T 3i4f_A 163 AAKVGLVSLTKTVAYEEAEY----GITANMVCPGDIIGEMKEA 201 (264)
T ss_dssp HHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCCCGGGGSC
T ss_pred HHHHHHHHHHHHHHHHhhhc----CcEEEEEccCCccCccchh
Confidence 99999999999999998876 9999999999999999765
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8.5e-24 Score=192.06 Aligned_cols=142 Identities=27% Similarity=0.327 Sum_probs=113.0
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHc-CCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQH-GGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~-g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++.+++||++|+++++++++.+.+++ |++|+||||||+....++.+.+ ++|++++++|+.+++.+++++.|.|++
T Consensus 56 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 135 (260)
T 2ae2_A 56 KGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKA 135 (260)
T ss_dssp TTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 46678899999999999999999999999 9999999999998766555555 778888877777777777777766643
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 136 ~------------------------------------------------------------------------------- 136 (260)
T 2ae2_A 136 S------------------------------------------------------------------------------- 136 (260)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+.|+||++||..+... ..+...|++||+
T Consensus 137 ------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~ 164 (260)
T 2ae2_A 137 ------------ERGNVVFISSVSGALA----------------------------------------VPYEAVYGATKG 164 (260)
T ss_dssp ------------SSEEEEEECCGGGTSC----------------------------------------CTTCHHHHHHHH
T ss_pred ------------CCcEEEEEcchhhccC----------------------------------------CCCcchHHHHHH
Confidence 1256666666665431 123346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.++.++++. ||+||+|+||+|+|++...
T Consensus 165 a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 199 (260)
T 2ae2_A 165 AMDQLTRCLAFEWAKD----NIRVNGVGPGVIATSLVEM 199 (260)
T ss_dssp HHHHHHHHHHHHTGGG----TEEEEEEEECSBCSHHHHH
T ss_pred HHHHHHHHHHHHHhhc----CcEEEEEecCCCCCcchhh
Confidence 9999999999998776 9999999999999998654
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=4.7e-23 Score=189.89 Aligned_cols=225 Identities=28% Similarity=0.356 Sum_probs=140.0
Q ss_pred CCceeEEEeecCCH-HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHH-hcccCC
Q psy2266 8 NNNVRFHQLDILDQ-SSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILF-PLLRPH 85 (313)
Q Consensus 8 g~~~~~~~~Dvs~~-~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~-~~m~~~ 85 (313)
+.++.++.||++|. ++++++++.+.+++|+||+||||||+....... +.+...+.---.....+.+.+- +..+.
T Consensus 61 ~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 136 (311)
T 3o26_A 61 HENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDA---DRFKAMISDIGEDSEELVKIYEKPEAQE- 136 (311)
T ss_dssp CCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECH---HHHHHHHHHHCSSTTHHHHHTTSHHHHT-
T ss_pred CCceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECCccccccccc---chhhhcccccccchhhcchhhcccchhc-
Confidence 45789999999998 999999999999999999999999997532100 0110000000000000000000 00000
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
......++|+.++++|+.|++
T Consensus 137 -----------------------------------------------------------~~~~~~~~~~~~~~~N~~g~~ 157 (311)
T 3o26_A 137 -----------------------------------------------------------LMSETYELAEECLKINYNGVK 157 (311)
T ss_dssp -----------------------------------------------------------TEECCHHHHHHHHHHHTHHHH
T ss_pred -----------------------------------------------------------ccccchhhhhhheeeeeehHH
Confidence 000012566677777777777
Q ss_pred HHHHHHhhcccC--CCceEEecCCccccccccChhh-hhhhhccccchHHHHHHHHHHHHHhhhcccccCCCC--CCchh
Q psy2266 166 TVCHILFPLLRP--HARVVNVASKLGMLYNVPSQEL-RQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWP--EFSYS 240 (313)
Q Consensus 166 ~~~~~~~p~l~~--~g~iv~vss~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~ 240 (313)
.+++.++|.|++ +|+||++||..+.......... ........++..++...........+.......+++ ..+|+
T Consensus 158 ~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 237 (311)
T 3o26_A 158 SVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYT 237 (311)
T ss_dssp HHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHH
T ss_pred HHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhH
Confidence 777777777754 3688888888776543322211 112222233444455555555555666555555553 34599
Q ss_pred hhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhc
Q psy2266 241 VSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLL 301 (313)
Q Consensus 241 ~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l 301 (313)
+||+|+..+++.+++++. +|+||+|+||+|+|+|.+.....++++.+........
T Consensus 238 ~SK~a~~~~~~~la~e~~------~i~v~~v~PG~v~T~~~~~~~~~~~~~~a~~~~~~~~ 292 (311)
T 3o26_A 238 TSKACLNAYTRVLANKIP------KFQVNCVCPGLVKTEMNYGIGNYTAEEGAEHVVRIAL 292 (311)
T ss_dssp HHHHHHHHHHHHHHHHCT------TSEEEEECCCSBCSGGGTTCCSBCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhcC------CceEEEecCCceecCCcCCCCCCCHHHHHHHHHHHHh
Confidence 999999999999888874 5999999999999999988766777777766655544
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.8e-24 Score=192.21 Aligned_cols=171 Identities=18% Similarity=0.104 Sum_probs=114.9
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR-DTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~-~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
++.+.++.++.||++|.++++++++.+.+++|++|+||||||+.. ...+.+.+ ++|++++++|+.+++.++|++.|.|
T Consensus 51 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 130 (261)
T 3n74_A 51 GEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHF 130 (261)
T ss_dssp HHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 345678899999999999999999999999999999999999976 34555544 8888888888888888888877776
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++.+.
T Consensus 131 ~~~~~--------------------------------------------------------------------------- 135 (261)
T 3n74_A 131 KENGA--------------------------------------------------------------------------- 135 (261)
T ss_dssp HHHHH---------------------------------------------------------------------------
T ss_pred HhcCC---------------------------------------------------------------------------
Confidence 54100
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
=.+.++||++||..+... ......|++|
T Consensus 136 ------------~~~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~as 163 (261)
T 3n74_A 136 ------------KGQECVILNVASTGAGRP----------------------------------------RPNLAWYNAT 163 (261)
T ss_dssp ------------TTCCEEEEEECCTTTTSC----------------------------------------CTTCHHHHHH
T ss_pred ------------CCCCeEEEEeCchhhcCC----------------------------------------CCCccHHHHH
Confidence 001357888888777541 2233459999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCC-CcchhhhhhhhhhcccCCc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVL-TPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~l~r~~~ 306 (313)
|+|+..|++.++.++++. ||+||+|+||+|+|++....... .++..+......|++|++.
T Consensus 164 Kaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (261)
T 3n74_A 164 KGWVVSVTKALAIELAPA----KIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLK 224 (261)
T ss_dssp HHHHHHHHHHHHHHHGGG----TEEEEEEEEC-------------------------CTTSSCCC
T ss_pred HHHHHHHHHHHHHHhhhc----CcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcC
Confidence 999999999999999876 99999999999999997654211 1222233334455666544
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=198.41 Aligned_cols=143 Identities=20% Similarity=0.243 Sum_probs=109.6
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
..+.++.++.||++|+++++++++.+.+++|+||+||||||+....++.+++ ++|++++++|+.|++.++|+++|.|++
T Consensus 56 ~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~ 135 (324)
T 3u9l_A 56 DNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRR 135 (324)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 3467789999999999999999999999999999999999998777666665 888888877777777777777776643
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 136 -------------------------------------------------------------------------------- 135 (324)
T 3u9l_A 136 -------------------------------------------------------------------------------- 135 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
++.|+||++||..+.... ......|++||+
T Consensus 136 -----------~~~g~iV~isS~~~~~~~---------------------------------------~~~~~~Y~asKa 165 (324)
T 3u9l_A 136 -----------QKHGLLIWISSSSSAGGT---------------------------------------PPYLAPYFAAKA 165 (324)
T ss_dssp -----------HTCEEEEEECCGGGTSCC---------------------------------------CSSCHHHHHHHH
T ss_pred -----------cCCCEEEEEecchhccCC---------------------------------------CCcchhHHHHHH
Confidence 123566666666654311 112345999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
|+..+++.++.++++. ||+||+|+||+|.|++..
T Consensus 166 a~~~~~~~la~el~~~----gI~v~~v~PG~v~t~~~~ 199 (324)
T 3u9l_A 166 AMDAIAVQYARELSRW----GIETSIIVPGAFTSGTNH 199 (324)
T ss_dssp HHHHHHHHHHHHHHTT----TEEEEEEEECCC------
T ss_pred HHHHHHHHHHHHhhhh----CcEEEEEECCccccCchh
Confidence 9999999999998866 999999999999988754
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=191.28 Aligned_cols=164 Identities=23% Similarity=0.308 Sum_probs=125.5
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.++.||++|.++++++++.+.+++|++|+||||||+.....+.+.+ ++|++.+++|+.+++.+++++.+.|.
T Consensus 72 ~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 151 (267)
T 4iiu_A 72 VANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMI 151 (267)
T ss_dssp HHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34567889999999999999999999999999999999999998776665555 78888887777777777777666542
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 152 ~~------------------------------------------------------------------------------ 153 (267)
T 4iiu_A 152 GA------------------------------------------------------------------------------ 153 (267)
T ss_dssp HH------------------------------------------------------------------------------
T ss_pred hc------------------------------------------------------------------------------
Confidence 10
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+++|+||++||..+... ..+...|++||
T Consensus 154 ------------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 181 (267)
T 4iiu_A 154 ------------RQGGRIITLSSVSGVMG----------------------------------------NRGQVNYSAAK 181 (267)
T ss_dssp ------------TSCEEEEEECCHHHHHC----------------------------------------CTTCHHHHHHH
T ss_pred ------------CCCcEEEEEcchHhccC----------------------------------------CCCCchhHHHH
Confidence 12366777777666541 23345699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
+|+..|++.++.++++. ||+||+|+||+|+|++.+.. ++.........|++|++.
T Consensus 182 aa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~p~~~~~~ 236 (267)
T 4iiu_A 182 AGIIGATKALAIELAKR----KITVNCIAPGLIDTGMIEME----ESALKEAMSMIPMKRMGQ 236 (267)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSTTCCCC----HHHHHHHHHTCTTCSCBC
T ss_pred HHHHHHHHHHHHHHhhc----CeEEEEEEEeeecCCccccc----HHHHHHHHhcCCCCCCcC
Confidence 99999999999999876 99999999999999997642 333344445556666554
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.7e-24 Score=194.36 Aligned_cols=161 Identities=22% Similarity=0.212 Sum_probs=119.5
Q ss_pred eEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEE
Q psy2266 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVN 90 (313)
Q Consensus 12 ~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~ 90 (313)
..+.+|++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 69 ~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~------ 142 (266)
T 3uxy_A 69 LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAA------ 142 (266)
T ss_dssp EECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH------
T ss_pred hccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh------
Confidence 3457999999999999999999999999999999998776666655 788888877777777777777666643
Q ss_pred EecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHH
Q psy2266 91 VASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHI 170 (313)
Q Consensus 91 isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 170 (313)
T Consensus 143 -------------------------------------------------------------------------------- 142 (266)
T 3uxy_A 143 -------------------------------------------------------------------------------- 142 (266)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHH
Q psy2266 171 LFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLS 250 (313)
Q Consensus 171 ~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~ 250 (313)
+++|+||++||..+.. +..+..+|++||+|+..|+
T Consensus 143 -----~~~g~iv~isS~~~~~----------------------------------------~~~~~~~Y~asKaa~~~l~ 177 (266)
T 3uxy_A 143 -----AGGGAIVNVASCWGLR----------------------------------------PGPGHALYCLTKAALASLT 177 (266)
T ss_dssp -----HTCEEEEEECCSBTTB----------------------------------------CCTTBHHHHHHHHHHHHHH
T ss_pred -----cCCcEEEEECCHHhCC----------------------------------------CCCCChHHHHHHHHHHHHH
Confidence 1236677777766654 1233456999999999999
Q ss_pred HHHHhhhccCCCCCCeEEEeecccccccccccccC----CCCcchhhhhhhhhhcccCCcc
Q psy2266 251 FIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG----VLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 251 ~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+.++.+++++ ||+||+|+||+|+|++.+... ....+..+......|++|+++.
T Consensus 178 ~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 234 (266)
T 3uxy_A 178 QCMGMDHAPQ----GIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEP 234 (266)
T ss_dssp HHHHHHHGGG----TEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCH
T ss_pred HHHHHHhhhc----CcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCH
Confidence 9999999877 999999999999999865421 1111112333445566666543
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.7e-24 Score=193.31 Aligned_cols=144 Identities=23% Similarity=0.253 Sum_probs=110.6
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
..+.++.+++||++|+++++++++.+.+++|+||+||||||+..... ..++|++++++|+.+++.++|++.|.|++.
T Consensus 71 ~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~---~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 147 (278)
T 3sx2_A 71 DIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSA---GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQ 147 (278)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSS---THHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred hcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC---CHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 44678999999999999999999999999999999999999876432 347788888777777777777777766430
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 148 -------------------------------------------------------------------------------- 147 (278)
T 3sx2_A 148 -------------------------------------------------------------------------------- 147 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
.++|+||++||.++...... ...+..+|++||+|
T Consensus 148 ----------~~~g~iv~isS~~~~~~~~~------------------------------------~~~~~~~Y~asKaa 181 (278)
T 3sx2_A 148 ----------GTGGSIVLISSSAGLAGVGS------------------------------------ADPGSVGYVAAKHG 181 (278)
T ss_dssp ----------CSCEEEEEECCGGGTSCCCC------------------------------------SSHHHHHHHHHHHH
T ss_pred ----------CCCcEEEEEccHHhcCCCcc------------------------------------CCCCchHhHHHHHH
Confidence 01245556665555431100 00122459999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+..|++.++.+++++ ||+||+|+||+|+|++..
T Consensus 182 ~~~~~~~la~e~~~~----gi~vn~v~PG~v~T~~~~ 214 (278)
T 3sx2_A 182 VVGLMRVYANLLAGQ----MIRVNSIHPSGVETPMIN 214 (278)
T ss_dssp HHHHHHHHHHHHGGG----TEEEEEEEESCBSSTTTS
T ss_pred HHHHHHHHHHHHhcc----CcEEEEEecCCccCccch
Confidence 999999999999877 999999999999999865
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.6e-24 Score=206.80 Aligned_cols=167 Identities=15% Similarity=-0.030 Sum_probs=118.2
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHc-CCCcEEEECCCCC-------------CCCCCC---------------
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQH-GGLDLLVNNAGIY-------------RDTAPG--------------- 54 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~-g~iDilVnNAGi~-------------~~~~~~--------------- 54 (313)
+++.|.++..+.||++|+++++++++.+.++| |+||+||||||+. ...++.
T Consensus 118 ~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~ 197 (422)
T 3s8m_A 118 AKAAGLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTI 197 (422)
T ss_dssp HHHTTCCEEEEESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEE
T ss_pred HHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccc
Confidence 45668889999999999999999999999999 9999999999983 222331
Q ss_pred ------Chh-HHHHHHHhHHHHHHH-HHHHHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHH
Q psy2266 55 ------SFG-QRAETTLATNFFALV-TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTD 126 (313)
Q Consensus 55 ------~~~-~~~~~~~~vNl~~~i-~l~ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 126 (313)
+++ ++|++++++|..+.| .+++++.+
T Consensus 198 ~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~---------------------------------------------- 231 (422)
T 3s8m_A 198 IQASIEPASAQEIEDTITVMGGQDWELWIDALEG---------------------------------------------- 231 (422)
T ss_dssp EEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHH----------------------------------------------
T ss_pred cccccCCCCHHHHHHHHHhhchhHHHHHHHHHHH----------------------------------------------
Confidence 233 666666666555554 44444432
Q ss_pred HHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcc-cCCCceEEecCCccccccccChhhhhhhhc
Q psy2266 127 YVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFN 205 (313)
Q Consensus 127 ~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l-~~~g~iv~vss~~~~~~~~~~~~~~~~~~~ 205 (313)
|.| +++|+||++||..+....+
T Consensus 232 ----------------------------------------------~~m~~~gG~IVniSSi~g~~~~p----------- 254 (422)
T 3s8m_A 232 ----------------------------------------------AGVLADGARSVAFSYIGTEITWP----------- 254 (422)
T ss_dssp ----------------------------------------------TTCEEEEEEEEEEEECCCGGGHH-----------
T ss_pred ----------------------------------------------HHHhhCCCEEEEEeCchhhccCC-----------
Confidence 122 2346777777777654110
Q ss_pred cccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccC
Q psy2266 206 ESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG 285 (313)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~ 285 (313)
.....+|++||+|+.+|+|.|+.+|++. |||||+|+||+|+|++....
T Consensus 255 ---------------------------~~~~~aY~ASKaAl~~lTrsLA~Ela~~----GIRVNaVaPG~i~T~~~~~i- 302 (422)
T 3s8m_A 255 ---------------------------IYWHGALGKAKVDLDRTAQRLNARLAKH----GGGANVAVLKSVVTQASAAI- 302 (422)
T ss_dssp ---------------------------HHTSHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCCCCTTGGGS-
T ss_pred ---------------------------CccchHHHHHHHHHHHHHHHHHHHhCcc----CEEEEEEEcCCCcChhhhcC-
Confidence 0112469999999999999999999877 99999999999999998764
Q ss_pred CCCcchhhhhhhhhhcccCCcc
Q psy2266 286 VLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 286 ~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+.........+.|++|.|+.
T Consensus 303 --p~~~~~~~~~~~~m~r~G~p 322 (422)
T 3s8m_A 303 --PVMPLYISMVYKIMKEKGLH 322 (422)
T ss_dssp --THHHHHHHHHHHHHHHTTCC
T ss_pred --CCChHHHHHHHhhhcCCcCh
Confidence 21111122334578888765
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.8e-24 Score=190.76 Aligned_cols=164 Identities=20% Similarity=0.251 Sum_probs=119.6
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcC------CCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHH
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHG------GLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHI 77 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g------~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra 77 (313)
++.+.++.++.+|++|.++++++++.+.++++ ++|+||||||+.....+.+.+ ++|++++++|+.+++.++++
T Consensus 53 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 132 (255)
T 3icc_A 53 QSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQ 132 (255)
T ss_dssp HHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred HhcCCceEEEecCcCCHHHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHH
Confidence 34577888999999999999999999988764 499999999997766555554 66676666666666655555
Q ss_pred HHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhh
Q psy2266 78 LFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTL 157 (313)
Q Consensus 78 ~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~ 157 (313)
+.|.
T Consensus 133 ~~~~---------------------------------------------------------------------------- 136 (255)
T 3icc_A 133 ALSR---------------------------------------------------------------------------- 136 (255)
T ss_dssp HTTT----------------------------------------------------------------------------
T ss_pred HHHh----------------------------------------------------------------------------
Confidence 5554
Q ss_pred hcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCC
Q psy2266 158 ATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEF 237 (313)
Q Consensus 158 ~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
|+++|+||++||..+... ..+..
T Consensus 137 -----------------~~~~~~iv~isS~~~~~~----------------------------------------~~~~~ 159 (255)
T 3icc_A 137 -----------------LRDNSRIINISSAATRIS----------------------------------------LPDFI 159 (255)
T ss_dssp -----------------EEEEEEEEEECCGGGTSC----------------------------------------CTTBH
T ss_pred -----------------hCCCCEEEEeCChhhccC----------------------------------------CCCcc
Confidence 444466666666666441 22335
Q ss_pred chhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 238 SYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 238 ~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
+|++||+|+..|++.++.++++. ||+||+|+||+|+|++.+... ..+..........|++|+++
T Consensus 160 ~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 223 (255)
T 3icc_A 160 AYSMTKGAINTMTFTLAKQLGAR----GITVNAILPGFVKTDMNAELL-SDPMMKQYATTISAFNRLGE 223 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCCSSSTTTT-TSHHHHHHHHHTSTTSSCBC
T ss_pred hhHHhHHHHHHHHHHHHHHHHhc----CeEEEEEEEeeecccchhhhc-ccHHHHHhhhccCCcCCCCC
Confidence 69999999999999999999876 999999999999999987642 12222333344556666654
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=192.80 Aligned_cols=143 Identities=27% Similarity=0.354 Sum_probs=114.8
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.++.||++|+++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++.+.
T Consensus 78 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~- 156 (276)
T 2b4q_A 78 DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSAS- 156 (276)
T ss_dssp CEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCC-
T ss_pred ceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccC-
Confidence 688889999999999999999999999999999999998766666666 888888888888888888888877743100
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 157 -------------------------------------------------------------------------------- 156 (276)
T 2b4q_A 157 -------------------------------------------------------------------------------- 156 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCC-chhhhHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEF-SYSVSKLGVA 247 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~al~ 247 (313)
-.+.|+||++||..+... ..+.. .|++||+|+.
T Consensus 157 ------~~~~g~iV~isS~~~~~~----------------------------------------~~~~~~~Y~asK~a~~ 190 (276)
T 2b4q_A 157 ------AENPARVINIGSVAGISA----------------------------------------MGEQAYAYGPSKAALH 190 (276)
T ss_dssp ------SSSCEEEEEECCGGGTCC----------------------------------------CCCSCTTHHHHHHHHH
T ss_pred ------CCCCCEEEEECCHHHcCC----------------------------------------CCCCccccHHHHHHHH
Confidence 000156777777666431 12234 6999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.+++.++.++++. ||+||+|+||+|+|++...
T Consensus 191 ~~~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~ 222 (276)
T 2b4q_A 191 QLSRMLAKELVGE----HINVNVIAPGRFPSRMTRH 222 (276)
T ss_dssp HHHHHHHHHHGGG----TEEEEEEEECCCCSTTTHH
T ss_pred HHHHHHHHHhccc----CeEEEEEEeccCcCcchhh
Confidence 9999999998876 9999999999999998654
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=192.26 Aligned_cols=88 Identities=14% Similarity=0.248 Sum_probs=71.8
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcC---CCcEEEECCCCCC-----CCCCCChh-HHHHHHHhHHHHHHHHHHH
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHG---GLDLLVNNAGIYR-----DTAPGSFG-QRAETTLATNFFALVTVCH 76 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g---~iDilVnNAGi~~-----~~~~~~~~-~~~~~~~~vNl~~~i~l~r 76 (313)
+.+.++.+++||++|+++++++++.+.+++| ++|+||||||+.. ..++.+.+ ++|++.+++|+.+++.++|
T Consensus 53 ~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 132 (269)
T 2h7i_A 53 RLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAK 132 (269)
T ss_dssp TSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred hcCCCceEEEccCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHH
Confidence 4466788999999999999999999999999 9999999999876 34555555 8999999888888888888
Q ss_pred HHHhcccCCceEEEEec
Q psy2266 77 ILFPLLRPHARVVNVAS 93 (313)
Q Consensus 77 a~~~~m~~~g~IV~isS 93 (313)
++.|.|+++|+||++||
T Consensus 133 ~~~~~~~~~g~iv~iss 149 (269)
T 2h7i_A 133 ALLPIMNPGGSIVGMDF 149 (269)
T ss_dssp HHGGGEEEEEEEEEEEC
T ss_pred HHHHhhccCCeEEEEcC
Confidence 87777765555555554
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=192.18 Aligned_cols=137 Identities=18% Similarity=0.209 Sum_probs=110.2
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC----CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD----TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~----~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.+++||++|.++++++++.+.+++|++|+||||||+... .++.+.+ ++|++++++|+.+++.+++++.|.|++
T Consensus 57 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 136 (275)
T 2pd4_A 57 SPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN 136 (275)
T ss_dssp CCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 47889999999999999999999999999999999999764 4454555 899999988888888888877776654
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
+|+|
T Consensus 137 ~g~i---------------------------------------------------------------------------- 140 (275)
T 2pd4_A 137 GASV---------------------------------------------------------------------------- 140 (275)
T ss_dssp EEEE----------------------------------------------------------------------------
T ss_pred CCEE----------------------------------------------------------------------------
Confidence 4444
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
|++||..+... ..+..+|++||+
T Consensus 141 -----------------v~isS~~~~~~----------------------------------------~~~~~~Y~asK~ 163 (275)
T 2pd4_A 141 -----------------LTLSYLGSTKY----------------------------------------MAHYNVMGLAKA 163 (275)
T ss_dssp -----------------EEEECGGGTSB----------------------------------------CTTCHHHHHHHH
T ss_pred -----------------EEEecchhcCC----------------------------------------CCCchhhHHHHH
Confidence 45555444321 123346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|+..+++.++.++++. ||+||+|+||+|+|++.+.
T Consensus 164 a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~ 198 (275)
T 2pd4_A 164 ALESAVRYLAVDLGKH----HIRVNALSAGPIRTLASSG 198 (275)
T ss_dssp HHHHHHHHHHHHHHTT----TCEEEEEEECCCCCTTGGG
T ss_pred HHHHHHHHHHHHhhhc----CeEEEEEeeCccccchhhh
Confidence 9999999999998866 9999999999999998765
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.5e-24 Score=195.09 Aligned_cols=138 Identities=19% Similarity=0.225 Sum_probs=110.4
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.+..++||++|+++++++++.+.+++|+||+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 54 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---- 129 (269)
T 3vtz_A 54 VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLA---- 129 (269)
T ss_dssp SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH----
T ss_pred ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH----
Confidence 466789999999999999999999999999999999998766666655 788888888877777777777776643
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 130 -------------------------------------------------------------------------------- 129 (269)
T 3vtz_A 130 -------------------------------------------------------------------------------- 129 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
++.|+||++||..+... ..+..+|++||+|+..
T Consensus 130 -------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asKaa~~~ 162 (269)
T 3vtz_A 130 -------IGHGSIINIASVQSYAA----------------------------------------TKNAAAYVTSKHALLG 162 (269)
T ss_dssp -------HTCEEEEEECCGGGTSB----------------------------------------CTTCHHHHHHHHHHHH
T ss_pred -------cCCCEEEEECchhhccC----------------------------------------CCCChhHHHHHHHHHH
Confidence 12356666666666441 2233569999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|++.++.+++ + ||+||+|+||+|+|++...
T Consensus 163 l~~~la~e~~----~-~i~vn~v~PG~v~T~~~~~ 192 (269)
T 3vtz_A 163 LTRSVAIDYA----P-KIRCNAVCPGTIMTPMVIK 192 (269)
T ss_dssp HHHHHHHHHT----T-TEEEEEEEECSBCCHHHHH
T ss_pred HHHHHHHHhc----C-CCEEEEEEECCCcCcchhh
Confidence 9999888875 3 7999999999999998643
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=5.3e-23 Score=189.70 Aligned_cols=146 Identities=18% Similarity=0.148 Sum_probs=113.6
Q ss_pred cCCCceeEEEeecCC----HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCC-----CC-----hh-HHHHHHHhHHHHH
Q psy2266 6 NNNNNVRFHQLDILD----QSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP-----GS-----FG-QRAETTLATNFFA 70 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~----~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~-----~~-----~~-~~~~~~~~vNl~~ 70 (313)
+.+.++.+++||++| .++++++++.+.+++|+||+||||||+....++ .+ .+ ++|++++++|+.+
T Consensus 71 ~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g 150 (288)
T 2x9g_A 71 ERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIA 150 (288)
T ss_dssp HSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHH
T ss_pred hcCCceEEEEeecCCccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHH
Confidence 346778999999999 999999999999999999999999999766555 44 44 7788888888888
Q ss_pred HHHHHHHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc
Q psy2266 71 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG 150 (313)
Q Consensus 71 ~i~l~ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~ 150 (313)
++.+++++.|.|++.+...
T Consensus 151 ~~~l~~~~~~~~~~~~~~~------------------------------------------------------------- 169 (288)
T 2x9g_A 151 PFLLTMSFAQRQKGTNPNC------------------------------------------------------------- 169 (288)
T ss_dssp HHHHHHHHHHHC--------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHhhcCCCC-------------------------------------------------------------
Confidence 8888887777775421000
Q ss_pred hhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccc
Q psy2266 151 QRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDK 230 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (313)
-...|+||++||..+...
T Consensus 170 ------------------------~~~~g~iv~isS~~~~~~-------------------------------------- 187 (288)
T 2x9g_A 170 ------------------------TSSNLSIVNLCDAMVDQP-------------------------------------- 187 (288)
T ss_dssp -------------------------CCCEEEEEECCTTTTSC--------------------------------------
T ss_pred ------------------------CCCCeEEEEEecccccCC--------------------------------------
Confidence 001368888888877541
Q ss_pred cCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 231 EAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 231 ~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
..+..+|++||+|+..|++.++.++++. ||+||+|+||+|.|++
T Consensus 188 --~~~~~~Y~asKaa~~~l~~~la~e~~~~----gI~vn~v~PG~v~t~~ 231 (288)
T 2x9g_A 188 --CMAFSLYNMGKHALVGLTQSAALELAPY----GIRVNGVAPGVSLLPV 231 (288)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSCSCCT
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHhhcc----CeEEEEEEeccccCcc
Confidence 2234569999999999999999999876 9999999999999998
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.2e-23 Score=187.84 Aligned_cols=136 Identities=18% Similarity=0.209 Sum_probs=105.1
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVN 90 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~ 90 (313)
+.++.||++|+++++++++.+.+++|++|+||||||+......+...++|++++++|+.+++.+++++.|.|++.
T Consensus 73 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~----- 147 (260)
T 3gem_A 73 AVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTAS----- 147 (260)
T ss_dssp CEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-----
T ss_pred CeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----
Confidence 678899999999999999999999999999999999976555333337788888777777777777777666541
Q ss_pred EecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHH
Q psy2266 91 VASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHI 170 (313)
Q Consensus 91 isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 170 (313)
T Consensus 148 -------------------------------------------------------------------------------- 147 (260)
T 3gem_A 148 -------------------------------------------------------------------------------- 147 (260)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHH
Q psy2266 171 LFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLS 250 (313)
Q Consensus 171 ~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~ 250 (313)
+.|+||++||..+... ..+...|++||+|+..|+
T Consensus 148 ------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asKaa~~~l~ 181 (260)
T 3gem_A 148 ------EVADIVHISDDVTRKG----------------------------------------SSKHIAYCATKAGLESLT 181 (260)
T ss_dssp ------SSCEEEEECCGGGGTC----------------------------------------CSSCHHHHHHHHHHHHHH
T ss_pred ------CCcEEEEECChhhcCC----------------------------------------CCCcHhHHHHHHHHHHHH
Confidence 1266777777666541 233456999999999999
Q ss_pred HHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 251 FIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 251 ~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+.++.++++ +|+||+|+||+|+|++..
T Consensus 182 ~~la~e~~~-----~Irvn~v~PG~v~t~~~~ 208 (260)
T 3gem_A 182 LSFAARFAP-----LVKVNGIAPALLMFQPKD 208 (260)
T ss_dssp HHHHHHHTT-----TCEEEEEEECTTCC----
T ss_pred HHHHHHHCC-----CCEEEEEeecccccCCCC
Confidence 998888763 599999999999999754
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=191.17 Aligned_cols=148 Identities=23% Similarity=0.267 Sum_probs=113.5
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
++.+.++.++.||++|.++++++++.+.+++|+||+||||||+... .++.+++ ++|++++++|+.+++.+++++.|.|
T Consensus 72 ~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 151 (272)
T 4e3z_A 72 TESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRM 151 (272)
T ss_dssp HHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 3457789999999999999999999999999999999999999865 4555555 8888888888888888888777766
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++..
T Consensus 152 ~~~~---------------------------------------------------------------------------- 155 (272)
T 4e3z_A 152 SRLY---------------------------------------------------------------------------- 155 (272)
T ss_dssp CGGG----------------------------------------------------------------------------
T ss_pred HHhc----------------------------------------------------------------------------
Confidence 4410
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
-.++|+||++||.++.... ..+...|++|
T Consensus 156 ------------~~~~g~iv~isS~~~~~~~---------------------------------------~~~~~~Y~as 184 (272)
T 4e3z_A 156 ------------SGQGGAIVNVSSMAAILGS---------------------------------------ATQYVDYAAS 184 (272)
T ss_dssp ------------TCCCEEEEEECCTHHHHCC---------------------------------------TTTCHHHHHH
T ss_pred ------------cCCCCEEEEEcchHhccCC---------------------------------------CCCcchhHHH
Confidence 0123678888887765421 1123459999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|+|+..|++.++.++++. ||+||+|+||+|+|++...
T Consensus 185 Kaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 221 (272)
T 4e3z_A 185 KAAIDTFTIGLAREVAAE----GIRVNAVRPGIIETDLHAS 221 (272)
T ss_dssp HHHHHHHHHHHHHHHGGG----TEEEEEEEECSBC------
T ss_pred HHHHHHHHHHHHHHHHHc----CcEEEEEecCCCcCCcccc
Confidence 999999999999999876 9999999999999998654
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.7e-24 Score=190.62 Aligned_cols=136 Identities=26% Similarity=0.294 Sum_probs=106.0
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.++.+++||++|.++++++++.+. ++++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|
T Consensus 44 ~~~~~~~~Dv~~~~~v~~~~~~~~--~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~----- 116 (244)
T 4e4y_A 44 ENLKFIKADLTKQQDITNVLDIIK--NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL----- 116 (244)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHTT--TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGE-----
T ss_pred ccceEEecCcCCHHHHHHHHHHHH--hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHh-----
Confidence 456789999999999999996554 78999999999998776666665 7777777666666666666555554
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 117 -------------------------------------------------------------------------------- 116 (244)
T 4e4y_A 117 -------------------------------------------------------------------------------- 116 (244)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
+++|+||++||..+... ..+..+|++||+|+.
T Consensus 117 --------~~~g~iv~~sS~~~~~~----------------------------------------~~~~~~Y~asKaa~~ 148 (244)
T 4e4y_A 117 --------KVGASIVFNGSDQCFIA----------------------------------------KPNSFAYTLSKGAIA 148 (244)
T ss_dssp --------EEEEEEEEECCGGGTCC----------------------------------------CTTBHHHHHHHHHHH
T ss_pred --------ccCcEEEEECCHHHccC----------------------------------------CCCCchhHHHHHHHH
Confidence 44456666666665441 223356999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.|++.++.++++. ||+||+|+||+|+|++.+.
T Consensus 149 ~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~ 180 (244)
T 4e4y_A 149 QMTKSLALDLAKY----QIRVNTVCPGTVDTDLYRN 180 (244)
T ss_dssp HHHHHHHHHHGGG----TCEEEEEEESCBCCHHHHH
T ss_pred HHHHHHHHHHHHc----CeEEEEEecCccCchhhHH
Confidence 9999999999876 9999999999999998654
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-23 Score=201.57 Aligned_cols=168 Identities=10% Similarity=-0.038 Sum_probs=118.7
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-------------CCCC-----------------
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR-------------DTAP----------------- 53 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~-------------~~~~----------------- 53 (313)
+++.|.++..+.||++|+++++++++.+.++||+||+||||||+.. ..++
T Consensus 104 ~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~ 183 (405)
T 3zu3_A 104 AAQKGLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIK 183 (405)
T ss_dssp HHHTTCCEEEEESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEE
T ss_pred HHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccc
Confidence 3456888999999999999999999999999999999999999851 2233
Q ss_pred ----CChh-HHHHHHHhHHHHHHH-HHHHHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHH
Q psy2266 54 ----GSFG-QRAETTLATNFFALV-TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDY 127 (313)
Q Consensus 54 ----~~~~-~~~~~~~~vNl~~~i-~l~ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 127 (313)
.+++ ++|++++++|..+.| ++++++.+
T Consensus 184 ~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~----------------------------------------------- 216 (405)
T 3zu3_A 184 ESVLQPATQSEIDSTVAVMGGEDWQMWIDALLD----------------------------------------------- 216 (405)
T ss_dssp EEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHH-----------------------------------------------
T ss_pred cccCCCCCHHHHHHHHHhhchhHHHHHHHHHHH-----------------------------------------------
Confidence 3333 666666666655555 44444332
Q ss_pred HHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcc-cCCCceEEecCCccccccccChhhhhhhhcc
Q psy2266 128 VQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNE 206 (313)
Q Consensus 128 ~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l-~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~ 206 (313)
|.| +++|+||++||..+....
T Consensus 217 ---------------------------------------------~~m~~~gG~IVniSSi~~~~~~------------- 238 (405)
T 3zu3_A 217 ---------------------------------------------AGVLAEGAQTTAFTYLGEKITH------------- 238 (405)
T ss_dssp ---------------------------------------------HTCEEEEEEEEEEECCCCGGGT-------------
T ss_pred ---------------------------------------------HhhhhCCcEEEEEeCchhhCcC-------------
Confidence 222 234677777777765411
Q ss_pred ccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCC-CeEEEeecccccccccccccC
Q psy2266 207 SLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRP-DIIVNPVHPGYVNTDLTEHKG 285 (313)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~-gI~vn~v~PG~v~T~~~~~~~ 285 (313)
+.....+|++||+||..++|.++.+|+ ++ |||||+|+||+|.|+++....
T Consensus 239 -------------------------p~~~~~aY~AaKaal~~ltrsLA~Ela----~~~GIRVNaVaPG~i~T~~s~~ip 289 (405)
T 3zu3_A 239 -------------------------DIYWNGSIGAAKKDLDQKVLAIRESLA----AHGGGDARVSVLKAVVSQASSAIP 289 (405)
T ss_dssp -------------------------TTTTTSHHHHHHHHHHHHHHHHHHHHH----TTTSCEEEEEECCCCCCHHHHTST
T ss_pred -------------------------CCccchHHHHHHHHHHHHHHHHHHHhC----cccCeEEEEEEeCCCcCchhhcCC
Confidence 011125699999999999999888887 45 999999999999999987642
Q ss_pred CCCcchhhhhhhhhhcccCCccc
Q psy2266 286 VLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 286 ~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
. .|.. ....+.|++|.|+..
T Consensus 290 ~-~p~y--~~~l~~~mkr~G~~E 309 (405)
T 3zu3_A 290 M-MPLY--LSLLFKVMKEKGTHE 309 (405)
T ss_dssp T-HHHH--HHHHHHHHHHHTCCC
T ss_pred C-CcHH--HHHHHHHHhcCCCcH
Confidence 1 2222 223344788887753
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.9e-23 Score=188.09 Aligned_cols=160 Identities=20% Similarity=0.241 Sum_probs=116.0
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCC-CCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIY-RDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~-~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
++.+.++.++.||++|.++++++++.+.+++|++|+||||||+. ...++.+.+ ++|++++++|+.+++.+++++.|.|
T Consensus 74 ~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 153 (262)
T 3rkr_A 74 VAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAM 153 (262)
T ss_dssp HHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34577899999999999999999999999999999999999984 334555554 7778777777777777777766665
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++
T Consensus 154 ~~------------------------------------------------------------------------------ 155 (262)
T 3rkr_A 154 IA------------------------------------------------------------------------------ 155 (262)
T ss_dssp HH------------------------------------------------------------------------------
T ss_pred Hh------------------------------------------------------------------------------
Confidence 43
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
++.|+||++||..+... ..+..+|++|
T Consensus 156 -------------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~as 182 (262)
T 3rkr_A 156 -------------AKRGHIINISSLAGKNP----------------------------------------VADGAAYTAS 182 (262)
T ss_dssp -------------TTCCEEEEECSSCSSCC----------------------------------------CTTCHHHHHH
T ss_pred -------------CCCceEEEEechhhcCC----------------------------------------CCCCchHHHH
Confidence 12366777777776541 2233569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccC-------CCCcchhhhhhhhh
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG-------VLTPEQGKIRQKIY 299 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~~ 299 (313)
|+|+..|++.++.++++. ||+||+|+||+|+|++..... ...|++.+....++
T Consensus 183 Kaa~~~l~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~dvA~~v~~l 242 (262)
T 3rkr_A 183 KWGLNGLMTSAAEELRQH----QVRVSLVAPGSVRTEFGVGLSAKKSALGAIEPDDIADVVALL 242 (262)
T ss_dssp HHHHHHHHHHHHHHHGGG----TCEEEEEEECCC----------------CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhc----CcEEEEEecCCCcCCcccccccccccccCCCHHHHHHHHHHH
Confidence 999999999999998876 999999999999999976532 34555655554444
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8.3e-24 Score=191.54 Aligned_cols=141 Identities=24% Similarity=0.337 Sum_probs=106.4
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR-DTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~-~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++.++.||++|+++++++++.+.+++|++|+||||||+.. ..++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 44 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 123 (248)
T 3asu_A 44 LGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVE 123 (248)
T ss_dssp HCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 3456888999999999999999999999999999999999874 34455554 777877777777777777776666533
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 124 -------------------------------------------------------------------------------- 123 (248)
T 3asu_A 124 -------------------------------------------------------------------------------- 123 (248)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
++.|+||++||..+... ..+...|++||+
T Consensus 124 -----------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asKa 152 (248)
T 3asu_A 124 -----------RNHGHIINIGSTAGSWP----------------------------------------YAGGNVYGATKA 152 (248)
T ss_dssp -----------HTCCEEEEECCGGGTSC----------------------------------------CTTCHHHHHHHH
T ss_pred -----------cCCceEEEEccchhccC----------------------------------------CCCCchHHHHHH
Confidence 11366677777666431 223356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccc-ccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVN-TDLTE 282 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~-T~~~~ 282 (313)
++..|++.++.++++. ||+||+|+||+|+ |++..
T Consensus 153 a~~~~~~~la~e~~~~----gi~v~~v~PG~v~gT~~~~ 187 (248)
T 3asu_A 153 FVRQFSLNLRTDLHGT----AVRVTDIEPGLVGGTEFSN 187 (248)
T ss_dssp HHHHHHHHHHHHTTTS----CCEEEEEEECSBCC-----
T ss_pred HHHHHHHHHHHHhhhc----CcEEEEEeccccccCcchh
Confidence 9999999998888765 9999999999999 99864
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-23 Score=188.72 Aligned_cols=143 Identities=21% Similarity=0.151 Sum_probs=111.9
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+.+.++..+.||++|.++++++++.+.+++|++|+||||||+... .++.+.+ ++|++++++|+.+++.++|++.|.|+
T Consensus 60 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~ 139 (260)
T 2zat_A 60 GEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEME 139 (260)
T ss_dssp HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 346678889999999999999999999999999999999998642 3444444 77888887777777777777766664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 140 ~~------------------------------------------------------------------------------ 141 (260)
T 2zat_A 140 KR------------------------------------------------------------------------------ 141 (260)
T ss_dssp HT------------------------------------------------------------------------------
T ss_pred Hc------------------------------------------------------------------------------
Confidence 31
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+.|+||++||..+... ..+...|++||
T Consensus 142 -------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK 168 (260)
T 2zat_A 142 -------------GGGSVLIVSSVGAYHP----------------------------------------FPNLGPYNVSK 168 (260)
T ss_dssp -------------TCEEEEEECCGGGTSC----------------------------------------CTTBHHHHHHH
T ss_pred -------------CCCEEEEEechhhcCC----------------------------------------CCCchhHHHHH
Confidence 1256666666665431 22334699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+++..+++.++.++++. ||+||+|+||+|+|++...
T Consensus 169 ~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 204 (260)
T 2zat_A 169 TALLGLTKNLAVELAPR----NIRVNCLAPGLIKTNFSQV 204 (260)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSSTTHH
T ss_pred HHHHHHHHHHHHHhccc----CeEEEEEEECcccCccchh
Confidence 99999999999998876 9999999999999998653
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=3.1e-23 Score=189.74 Aligned_cols=140 Identities=22% Similarity=0.284 Sum_probs=100.6
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCh----h-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF----G-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~----~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
+.++.+++||++|+++++++++.+.+++|++|+||||||+....++.+. + ++|++++++|+.+++.++|++.|.|
T Consensus 57 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 136 (278)
T 1spx_A 57 EQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHL 136 (278)
T ss_dssp GGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCceeEEecccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4578889999999999999999999999999999999998765544444 3 6666666666666666666555554
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++
T Consensus 137 ~~------------------------------------------------------------------------------ 138 (278)
T 1spx_A 137 SS------------------------------------------------------------------------------ 138 (278)
T ss_dssp HH------------------------------------------------------------------------------
T ss_pred hh------------------------------------------------------------------------------
Confidence 32
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCcc-ccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLG-MLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
.+|+||++||..+ ... ..+...|++
T Consensus 139 --------------~~g~iv~isS~~~~~~~----------------------------------------~~~~~~Y~~ 164 (278)
T 1spx_A 139 --------------TKGEIVNISSIASGLHA----------------------------------------TPDFPYYSI 164 (278)
T ss_dssp --------------HTCEEEEECCTTSSSSC----------------------------------------CTTSHHHHH
T ss_pred --------------cCCeEEEEecccccccC----------------------------------------CCCccHHHH
Confidence 1266677777665 331 123346999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
||+++..+++.++.++++. ||+||+|+||+|.|++...
T Consensus 165 sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 202 (278)
T 1spx_A 165 AKAAIDQYTRNTAIDLIQH----GIRVNSISPGLVATGFGSA 202 (278)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCCCC---
T ss_pred HHHHHHHHHHHHHHHHHhc----CcEEEEEecCcccCccccc
Confidence 9999999999999998866 9999999999999998654
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-23 Score=187.06 Aligned_cols=138 Identities=22% Similarity=0.278 Sum_probs=106.1
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
+..+.+|++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 48 ~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~----- 122 (250)
T 2fwm_X 48 FATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRR----- 122 (250)
T ss_dssp SEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----
T ss_pred ceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh-----
Confidence 67789999999999999999999999999999999998766666665 788888887777777777777776643
Q ss_pred EEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHH
Q psy2266 90 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCH 169 (313)
Q Consensus 90 ~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 169 (313)
T Consensus 123 -------------------------------------------------------------------------------- 122 (250)
T 2fwm_X 123 -------------------------------------------------------------------------------- 122 (250)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHH
Q psy2266 170 ILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKL 249 (313)
Q Consensus 170 ~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l 249 (313)
++.|+||++||..+... ..+...|++||+++..+
T Consensus 123 ------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~~~ 156 (250)
T 2fwm_X 123 ------QRGGAIVTVASDAAHTP----------------------------------------RIGMSAYGASKAALKSL 156 (250)
T ss_dssp ------HTCCEEEEECCGGGTSC----------------------------------------CTTCHHHHHHHHHHHHH
T ss_pred ------cCCCEEEEECchhhCCC----------------------------------------CCCCchHHHHHHHHHHH
Confidence 11356666666665431 22335699999999999
Q ss_pred HHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 250 SFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 250 ~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++.++.++++. ||+||+|+||+|+|++.+.
T Consensus 157 ~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 186 (250)
T 2fwm_X 157 ALSVGLELAGS----GVRCNVVSPGSTDTDMQRT 186 (250)
T ss_dssp HHHHHHHHGGG----TCEEEEEEECCC-------
T ss_pred HHHHHHHhCcc----CCEEEEEECCcccCccccc
Confidence 99999998876 9999999999999998654
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-23 Score=191.07 Aligned_cols=88 Identities=15% Similarity=0.118 Sum_probs=70.1
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.+++||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.+++++.|.|++
T Consensus 49 ~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 128 (263)
T 2a4k_A 49 ALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE 128 (263)
T ss_dssp TCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred HhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc
Confidence 3445788899999999999999999999999999999999998766666666 999999999999999988888887732
Q ss_pred CceEEEEec
Q psy2266 85 HARVVNVAS 93 (313)
Q Consensus 85 ~g~IV~isS 93 (313)
+++||++||
T Consensus 129 ~g~iv~isS 137 (263)
T 2a4k_A 129 GGSLVLTGS 137 (263)
T ss_dssp TCEEEEECC
T ss_pred CCEEEEEec
Confidence 444444444
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.7e-23 Score=196.14 Aligned_cols=161 Identities=17% Similarity=0.185 Sum_probs=124.1
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.+++||++|+++++++++.+.+++|+||+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|+
T Consensus 97 ~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~ 176 (346)
T 3kvo_A 97 EAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLK 176 (346)
T ss_dssp HHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred HhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 44577899999999999999999999999999999999999998777766666 88888888888888777777777765
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 177 ~~------------------------------------------------------------------------------ 178 (346)
T 3kvo_A 177 KS------------------------------------------------------------------------------ 178 (346)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred HC------------------------------------------------------------------------------
Confidence 52
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+.|+||++||..+.... ...+..+|++||
T Consensus 179 -------------~~g~IV~iSS~~~~~~~--------------------------------------~~~~~~~Y~aSK 207 (346)
T 3kvo_A 179 -------------KVAHILNISPPLNLNPV--------------------------------------WFKQHCAYTIAK 207 (346)
T ss_dssp -------------SSCEEEEECCCCCCCGG--------------------------------------GTSSSHHHHHHH
T ss_pred -------------CCCEEEEECCHHHcCCC--------------------------------------CCCCchHHHHHH
Confidence 12667777776664411 012335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccc-cccccccccC-------CCCcchhhhhhhhh
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGY-VNTDLTEHKG-------VLTPEQGKIRQKIY 299 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~-v~T~~~~~~~-------~~~~~~~~~~~~~~ 299 (313)
+|+..|++.++.+++ . ||+||+|+||+ |+|++.+... ..+|++.+....++
T Consensus 208 aal~~l~~~la~e~~-~----gIrvn~v~PG~~i~T~~~~~~~~~~~~~r~~~pedvA~~v~~L 266 (346)
T 3kvo_A 208 YGMSMYVLGMAEEFK-G----EIAVNALWPKTAIHTAAMDMLGGPGIESQCRKVDIIADAAYSI 266 (346)
T ss_dssp HHHHHHHHHHHHHTT-T----TCEEEEEECSBCBCCHHHHHHCC--CGGGCBCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc-C----CcEEEEEeCCCccccHHHHhhccccccccCCCHHHHHHHHHHH
Confidence 999999999998887 5 99999999995 9998765421 34556665554444
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.7e-23 Score=187.62 Aligned_cols=137 Identities=26% Similarity=0.288 Sum_probs=110.8
Q ss_pred eEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEE
Q psy2266 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVN 90 (313)
Q Consensus 12 ~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~ 90 (313)
.+++||++|+++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.+++++.|.|++.
T Consensus 52 ~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~----- 126 (256)
T 2d1y_A 52 AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV----- 126 (256)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----
T ss_pred CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----
Confidence 6789999999999999999999999999999999998766666665 8888888888888887777777766541
Q ss_pred EecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHH
Q psy2266 91 VASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHI 170 (313)
Q Consensus 91 isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 170 (313)
T Consensus 127 -------------------------------------------------------------------------------- 126 (256)
T 2d1y_A 127 -------------------------------------------------------------------------------- 126 (256)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHH
Q psy2266 171 LFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLS 250 (313)
Q Consensus 171 ~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~ 250 (313)
+.|+||++||..+... ..+...|++||+++..|+
T Consensus 127 ------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~~~~ 160 (256)
T 2d1y_A 127 ------GGGAIVNVASVQGLFA----------------------------------------EQENAAYNASKGGLVNLT 160 (256)
T ss_dssp ------TCEEEEEECCGGGTSB----------------------------------------CTTBHHHHHHHHHHHHHH
T ss_pred ------CCcEEEEEccccccCC----------------------------------------CCCChhHHHHHHHHHHHH
Confidence 1256666666665431 123346999999999999
Q ss_pred HHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 251 FIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 251 ~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+.++.++++. ||+||+|+||+|+|++...
T Consensus 161 ~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 189 (256)
T 2d1y_A 161 RSLALDLAPL----RIRVNAVAPGAIATEAVLE 189 (256)
T ss_dssp HHHHHHHGGG----TEEEEEEEECSBCCHHHHH
T ss_pred HHHHHHHhhc----CeEEEEEeeCCccCchhhh
Confidence 9999998876 9999999999999998643
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.5e-23 Score=187.97 Aligned_cols=136 Identities=23% Similarity=0.348 Sum_probs=104.5
Q ss_pred EEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEE
Q psy2266 13 FHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNV 91 (313)
Q Consensus 13 ~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~i 91 (313)
.++||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.+++++.|.|++.
T Consensus 57 ~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------ 130 (247)
T 1uzm_A 57 GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN------ 130 (247)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT------
T ss_pred CeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------
Confidence 378999999999999999999999999999999998766665555 7888888777777777777777766431
Q ss_pred ecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHH
Q psy2266 92 ASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHIL 171 (313)
Q Consensus 92 sS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 171 (313)
T Consensus 131 -------------------------------------------------------------------------------- 130 (247)
T 1uzm_A 131 -------------------------------------------------------------------------------- 130 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHH
Q psy2266 172 FPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSF 251 (313)
Q Consensus 172 ~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~ 251 (313)
+.|+||++||..+... ..+...|++||+|+..+++
T Consensus 131 -----~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~~~~~ 165 (247)
T 1uzm_A 131 -----KFGRMIFIGSVSGLWG----------------------------------------IGNQANYAASKAGVIGMAR 165 (247)
T ss_dssp -----TCEEEEEECCCCC---------------------------------------------CCHHHHHHHHHHHHHHH
T ss_pred -----CCCEEEEECCHhhccC----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 1256666666665431 1233469999999999999
Q ss_pred HHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 252 IQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 252 ~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.++.++++. ||+||+|+||+|+|++.+.
T Consensus 166 ~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 193 (247)
T 1uzm_A 166 SIARELSKA----NVTANVVAPGYIDTDMTRA 193 (247)
T ss_dssp HHHHHHGGG----TEEEEEEEECSBCCHHHHH
T ss_pred HHHHHhhhc----CcEEEEEEeCCCcccchhh
Confidence 999998876 9999999999999998654
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-23 Score=190.59 Aligned_cols=162 Identities=14% Similarity=0.079 Sum_probs=116.0
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC----CCCC-hh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT----APGS-FG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~----~~~~-~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
.+++.+++||++|.++++++++.+.+++|+||+||||||+.... .+.+ .+ ++|++.+++|+.+++.+++++.|.
T Consensus 74 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 153 (280)
T 3nrc_A 74 FNPAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSM 153 (280)
T ss_dssp GCCSEEEECCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred cCCceEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34588999999999999999999999999999999999997642 2222 22 566666666666665555555554
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++
T Consensus 154 ~~~----------------------------------------------------------------------------- 156 (280)
T 3nrc_A 154 MKN----------------------------------------------------------------------------- 156 (280)
T ss_dssp HTT-----------------------------------------------------------------------------
T ss_pred hhc-----------------------------------------------------------------------------
Confidence 432
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
++|+||++||.++... ..+...|++
T Consensus 157 ---------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~a 181 (280)
T 3nrc_A 157 ---------------RNASMVALTYIGAEKA----------------------------------------MPSYNTMGV 181 (280)
T ss_dssp ---------------TTCEEEEEECGGGTSC----------------------------------------CTTTHHHHH
T ss_pred ---------------CCCeEEEEeccccccC----------------------------------------CCCchhhHH
Confidence 2366777777666541 223346999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
||+|+..|++.++.++++. ||+||+|+||+|+|++.+.... .++..+......|++|.++
T Consensus 182 sKaal~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~~~~~ 241 (280)
T 3nrc_A 182 AKASLEATVRYTALALGED----GIKVNAVSAGPIKTLAASGISN-FKKMLDYNAMVSPLKKNVD 241 (280)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TCEEEEEEECCCCCSGGGGCTT-HHHHHHHHHHHSTTCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHc----CcEEEEEeeccccchhhhcCcc-hHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999876 9999999999999999776421 1222333344456666544
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-23 Score=190.22 Aligned_cols=141 Identities=23% Similarity=0.267 Sum_probs=113.5
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.+++||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.++|++.|.|++
T Consensus 56 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-- 133 (263)
T 3ai3_A 56 GVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRA-- 133 (263)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--
Confidence 66788999999999999999999999999999999999998766666655 888888888877777777777776643
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 134 -------------------------------------------------------------------------------- 133 (263)
T 3ai3_A 134 -------------------------------------------------------------------------------- 133 (263)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
++.|+||++||..+... .++...|++||+|+
T Consensus 134 ---------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 164 (263)
T 3ai3_A 134 ---------RGGGAIIHNASICAVQP----------------------------------------LWYEPIYNVTKAAL 164 (263)
T ss_dssp ---------HTCEEEEEECCGGGTSC----------------------------------------CTTCHHHHHHHHHH
T ss_pred ---------cCCcEEEEECchhhcCC----------------------------------------CCCcchHHHHHHHH
Confidence 11256666666665431 12334699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+++.++.++++. ||+||+|+||+|.||+...
T Consensus 165 ~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 197 (263)
T 3ai3_A 165 MMFSKTLATEVIKD----NIRVNCINPGLILTPDWIK 197 (263)
T ss_dssp HHHHHHHHHHHGGG----TEEEEEEEECCBCCHHHHH
T ss_pred HHHHHHHHHHhhhc----CcEEEEEecCcccCcchhh
Confidence 99999999998866 9999999999999998543
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-23 Score=189.38 Aligned_cols=159 Identities=17% Similarity=0.113 Sum_probs=117.9
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC----CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD----TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~----~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++++|++|.++++++++.+.+++|++|+||||||+... .++.+.+ ++|++.+++|+.+++.++|++.|.|++
T Consensus 59 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 138 (261)
T 2wyu_A 59 GALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE 138 (261)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE
T ss_pred CcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc
Confidence 37889999999999999999999999999999999998763 4454555 899999988888888888877776654
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
+|+
T Consensus 139 ~g~----------------------------------------------------------------------------- 141 (261)
T 2wyu_A 139 GGG----------------------------------------------------------------------------- 141 (261)
T ss_dssp EEE-----------------------------------------------------------------------------
T ss_pred CCE-----------------------------------------------------------------------------
Confidence 444
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
||++||..+... ..+...|++||+
T Consensus 142 ----------------iv~isS~~~~~~----------------------------------------~~~~~~Y~asK~ 165 (261)
T 2wyu_A 142 ----------------IVTLTYYASEKV----------------------------------------VPKYNVMAIAKA 165 (261)
T ss_dssp ----------------EEEEECGGGTSB----------------------------------------CTTCHHHHHHHH
T ss_pred ----------------EEEEecccccCC----------------------------------------CCCchHHHHHHH
Confidence 455555444321 122346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
|+..+++.++.+++++ ||+||+|+||+|+|++.+... ..++.........|++|+++
T Consensus 166 a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~p~~~~~~ 222 (261)
T 2wyu_A 166 ALEASVRYLAYELGPK----GVRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTAPLRRNIT 222 (261)
T ss_dssp HHHHHHHHHHHHHGGG----TCEEEEEEECCCCCTGGGGCT-THHHHHHHHHHHSTTSSCCC
T ss_pred HHHHHHHHHHHHHhhh----CcEEEEEeeCCCcCchhhhcc-ccHHHHHHHHhcCCCCCCCC
Confidence 9999999999998876 999999999999999865421 11122222233456666554
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.89 E-value=8.4e-23 Score=185.01 Aligned_cols=140 Identities=20% Similarity=0.234 Sum_probs=111.2
Q ss_pred CCceeEEEeec--CCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 8 NNNVRFHQLDI--LDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 8 g~~~~~~~~Dv--s~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+.++.++.+|+ +|.++++++++.+.+++|+||+||||||+... .++.+.+ ++|++++++|+.+++.++|++.|.|+
T Consensus 61 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~ 140 (252)
T 3f1l_A 61 GRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLL 140 (252)
T ss_dssp SCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 34678899999 99999999999999999999999999999643 4666665 88888888888888877777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 141 ~~------------------------------------------------------------------------------ 142 (252)
T 3f1l_A 141 KS------------------------------------------------------------------------------ 142 (252)
T ss_dssp TS------------------------------------------------------------------------------
T ss_pred HC------------------------------------------------------------------------------
Confidence 41
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+.|+||++||..+... ..+..+|++||
T Consensus 143 -------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 169 (252)
T 3f1l_A 143 -------------DAGSLVFTSSSVGRQG----------------------------------------RANWGAYAASK 169 (252)
T ss_dssp -------------SSCEEEEECCGGGTSC----------------------------------------CTTCHHHHHHH
T ss_pred -------------CCCEEEEECChhhccC----------------------------------------CCCCchhHHHH
Confidence 2366777777666541 22335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+|+..|++.++.++++ . |+||+|+||+|+|++...
T Consensus 170 ~a~~~l~~~la~e~~~----~-irvn~v~PG~v~t~~~~~ 204 (252)
T 3f1l_A 170 FATEGMMQVLADEYQQ----R-LRVNCINPGGTRTAMRAS 204 (252)
T ss_dssp HHHHHHHHHHHHHTTT----T-CEEEEEECCSBSSHHHHH
T ss_pred HHHHHHHHHHHHHhcC----C-cEEEEEecCcccCchhhh
Confidence 9999999998888753 3 999999999999998654
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-23 Score=192.73 Aligned_cols=145 Identities=19% Similarity=0.230 Sum_probs=116.2
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.+++||++|.++++++++.+.+++|+||+||||||+....++.+.+ ++|++++++|+.+++.+++++.|.|+
T Consensus 76 ~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 155 (301)
T 3tjr_A 76 RGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLL 155 (301)
T ss_dssp HHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 34577899999999999999999999999999999999999998766666655 77888887777777777777766654
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 156 ~~------------------------------------------------------------------------------ 157 (301)
T 3tjr_A 156 EQ------------------------------------------------------------------------------ 157 (301)
T ss_dssp HH------------------------------------------------------------------------------
T ss_pred hc------------------------------------------------------------------------------
Confidence 31
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+.+|+||++||..+... ..+...|++||
T Consensus 158 ------------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 185 (301)
T 3tjr_A 158 ------------GTGGHIAFTASFAGLVP----------------------------------------NAGLGTYGVAK 185 (301)
T ss_dssp ------------CSCEEEEEECCGGGTSC----------------------------------------CTTBHHHHHHH
T ss_pred ------------CCCcEEEEeCchhhcCC----------------------------------------CCCchHHHHHH
Confidence 01356777777666541 22335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+|+..|++.++.++++. ||+||+|+||+|+|++...
T Consensus 186 aa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~ 221 (301)
T 3tjr_A 186 YGVVGLAETLAREVKPN----GIGVSVLCPMVVETKLVSN 221 (301)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEECCSCCCSSHHHH
T ss_pred HHHHHHHHHHHHHhccc----CcEEEEEECCccccccccc
Confidence 99999999999999876 9999999999999998653
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.8e-23 Score=188.67 Aligned_cols=137 Identities=19% Similarity=0.118 Sum_probs=109.9
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.+++||++|+++++++++.+.+++| +|+||||||+....++.+.+ ++|++.+++|+.+++.++|++.|.|++.
T Consensus 59 ~~~~~~~D~~~~~~v~~~~~~~~~~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--- 134 (260)
T 2z1n_A 59 QVDIVAGDIREPGDIDRLFEKARDLGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK--- 134 (260)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHTTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH---
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHhcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---
Confidence 788899999999999999999999999 99999999987665555555 7788888777777777777766666431
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 135 -------------------------------------------------------------------------------- 134 (260)
T 2z1n_A 135 -------------------------------------------------------------------------------- 134 (260)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
+.|+||++||..+... ..+...|++||+++..
T Consensus 135 --------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~~ 166 (260)
T 2z1n_A 135 --------GWGRMVYIGSVTLLRP----------------------------------------WQDLALSNIMRLPVIG 166 (260)
T ss_dssp --------TCEEEEEECCGGGTSC----------------------------------------CTTBHHHHHHTHHHHH
T ss_pred --------CCcEEEEECchhhcCC----------------------------------------CCCCchhHHHHHHHHH
Confidence 1256666666665431 2233469999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+++.++.++++. ||+||+|+||+|.|++..
T Consensus 167 ~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~ 196 (260)
T 2z1n_A 167 VVRTLALELAPH----GVTVNAVLPSLILTDRVR 196 (260)
T ss_dssp HHHHHHHHHGGG----TEEEEEEEECHHHHCCCC
T ss_pred HHHHHHHHHhhh----CeEEEEEEECCcccchhh
Confidence 999999998876 999999999999999966
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.6e-23 Score=191.03 Aligned_cols=143 Identities=26% Similarity=0.297 Sum_probs=113.4
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc--c
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL--L 82 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~--m 82 (313)
+.+.++.+++||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.++|++.|. |
T Consensus 68 ~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m 147 (277)
T 2rhc_B 68 EAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGM 147 (277)
T ss_dssp HTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCH
T ss_pred hcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhH
Confidence 3467788999999999999999999999999999999999997765555555 778888877777777777777665 5
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++
T Consensus 148 ~~------------------------------------------------------------------------------ 149 (277)
T 2rhc_B 148 LE------------------------------------------------------------------------------ 149 (277)
T ss_dssp HH------------------------------------------------------------------------------
T ss_pred hh------------------------------------------------------------------------------
Confidence 33
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
++.|+||++||..+... ..+...|++|
T Consensus 150 -------------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~as 176 (277)
T 2rhc_B 150 -------------RGTGRIVNIASTGGKQG----------------------------------------VVHAAPYSAS 176 (277)
T ss_dssp -------------HTEEEEEEECCGGGTSC----------------------------------------CTTCHHHHHH
T ss_pred -------------cCCeEEEEECccccccC----------------------------------------CCCCccHHHH
Confidence 11256667777665431 1233469999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|+|+..+++.++.++++. ||+||+|+||+|+|++...
T Consensus 177 K~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 213 (277)
T 2rhc_B 177 KHGVVGFTKALGLELART----GITVNAVCPGFVETPMAAS 213 (277)
T ss_dssp HHHHHHHHHHHHHHHTTT----EEEEEEEEECSBCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh----CcEEEEEecCcCcCchhhh
Confidence 999999999999998765 9999999999999998643
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.5e-23 Score=188.80 Aligned_cols=138 Identities=13% Similarity=0.128 Sum_probs=105.8
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC----CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD----TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~----~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.+++||++|.++++++++.+.+++|++|+||||||+... .++.+.+ ++|++.+++|+.+++.+++++.|.|++
T Consensus 72 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 151 (285)
T 2p91_A 72 SDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEG 151 (285)
T ss_dssp CCCEEECCTTCHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTT
T ss_pred CeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999998753 3344444 677777777777666666666665542
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 152 -------------------------------------------------------------------------------- 151 (285)
T 2p91_A 152 -------------------------------------------------------------------------------- 151 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
++|+||++||..+... ..+...|++||+
T Consensus 152 ------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~ 179 (285)
T 2p91_A 152 ------------RNGAIVTLSYYGAEKV----------------------------------------VPHYNVMGIAKA 179 (285)
T ss_dssp ------------SCCEEEEEECGGGTSB----------------------------------------CTTTTHHHHHHH
T ss_pred ------------cCCEEEEEccchhccC----------------------------------------CCCccHHHHHHH
Confidence 2355666666555431 123346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|+..+++.++.++++. ||+||+|+||+|+|++.+.
T Consensus 180 a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 214 (285)
T 2p91_A 180 ALESTVRYLAYDIAKH----GHRINAISAGPVKTLAAYS 214 (285)
T ss_dssp HHHHHHHHHHHHHHTT----TCEEEEEEECCCCCSCC--
T ss_pred HHHHHHHHHHHHhccc----CcEEEEEEeCcccCchhhc
Confidence 9999999999998866 9999999999999998654
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-23 Score=187.42 Aligned_cols=143 Identities=26% Similarity=0.397 Sum_probs=112.8
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.++.||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 48 ~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~ 127 (255)
T 2q2v_A 48 RHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRA 127 (255)
T ss_dssp TTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3466788899999999999999999999999999999999997655555554 778888877777777777777666643
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 128 ~------------------------------------------------------------------------------- 128 (255)
T 2q2v_A 128 R------------------------------------------------------------------------------- 128 (255)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+.|+||++||..+... ..+...|++||+
T Consensus 129 ------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~ 156 (255)
T 2q2v_A 129 ------------NWGRIINIASVHGLVG----------------------------------------STGKAAYVAAKH 156 (255)
T ss_dssp ------------TCEEEEEECCGGGTSC----------------------------------------CTTBHHHHHHHH
T ss_pred ------------CCcEEEEEcCchhccC----------------------------------------CCCchhHHHHHH
Confidence 1256667766665431 123346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.++.++++. ||+||+|+||+|.|++...
T Consensus 157 a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 191 (255)
T 2q2v_A 157 GVVGLTKVVGLETATS----NVTCNAICPGWVLTPLVQK 191 (255)
T ss_dssp HHHHHHHHHHHHTTTS----SEEEEEEEESSBCCHHHHH
T ss_pred HHHHHHHHHHHHhccc----CcEEEEEeeCCCcCcchhh
Confidence 9999999999888765 9999999999999998653
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-23 Score=188.57 Aligned_cols=142 Identities=23% Similarity=0.228 Sum_probs=113.1
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.++++|++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++.
T Consensus 51 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~- 129 (253)
T 1hxh_A 51 GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET- 129 (253)
T ss_dssp CTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-
Confidence 56788899999999999999999999999999999999998766666665 8888888888888877777777766541
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 130 -------------------------------------------------------------------------------- 129 (253)
T 1hxh_A 130 -------------------------------------------------------------------------------- 129 (253)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+|+||++||..+... ..+...|++||+++
T Consensus 130 -----------~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 158 (253)
T 1hxh_A 130 -----------GGSIINMASVSSWLP----------------------------------------IEQYAGYSASKAAV 158 (253)
T ss_dssp -----------CEEEEEECCGGGTSC----------------------------------------CTTBHHHHHHHHHH
T ss_pred -----------CCEEEEEcchhhcCC----------------------------------------CCCCccHHHHHHHH
Confidence 155666666555431 12334699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+++.++.++++. .+||+||+|+||+|.|++...
T Consensus 159 ~~~~~~la~e~~~~--~~gi~v~~v~Pg~v~t~~~~~ 193 (253)
T 1hxh_A 159 SALTRAAALSCRKQ--GYAIRVNSIHPDGIYTPMMQA 193 (253)
T ss_dssp HHHHHHHHHHHHHH--TCCEEEEEEEESEECCHHHHH
T ss_pred HHHHHHHHHHhhhc--CCCeEEEEEEeCCccCchhhh
Confidence 99999999988753 238999999999999998654
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.9e-23 Score=189.85 Aligned_cols=138 Identities=26% Similarity=0.298 Sum_probs=108.2
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC----CCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA----PGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~----~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
++.+++||++|+++++++++.+.+++|++|+||||||+....+ +.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 59 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 138 (280)
T 1xkq_A 59 QVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVA 138 (280)
T ss_dssp GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhc
Confidence 7889999999999999999999999999999999999876554 44444 677777777776666666666665532
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 139 -------------------------------------------------------------------------------- 138 (280)
T 1xkq_A 139 -------------------------------------------------------------------------------- 138 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCC-CCCCchhhhH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAG-WPEFSYSVSK 243 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK 243 (313)
.+|+||++||..+... . .+...|++||
T Consensus 139 ------------~~g~iv~isS~~~~~~----------------------------------------~~~~~~~Y~asK 166 (280)
T 1xkq_A 139 ------------SKGEIVNVSSIVAGPQ----------------------------------------AQPDFLYYAIAK 166 (280)
T ss_dssp ------------HTCEEEEECCGGGSSS----------------------------------------CCCSSHHHHHHH
T ss_pred ------------CCCcEEEecCccccCC----------------------------------------CCCcccHHHHHH
Confidence 1256666666665431 1 2334699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+|+..|++.++.++++. ||+||+|+||+|+|++...
T Consensus 167 ~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 202 (280)
T 1xkq_A 167 AALDQYTRSTAIDLAKF----GIRVNSVSPGMVETGFTNA 202 (280)
T ss_dssp HHHHHHHHHHHHHHHTT----TCEEEEEEECCBCSSHHHH
T ss_pred HHHHHHHHHHHHHhccC----CeEEEEEeeCcCcCCcccc
Confidence 99999999999998766 9999999999999998654
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-23 Score=190.18 Aligned_cols=138 Identities=25% Similarity=0.354 Sum_probs=101.9
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
+.+++||++|.++++++++.+.+++|++|+||||||+....++.+++ ++|++++++|+.+++.+++++.|.|++
T Consensus 61 ~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~----- 135 (253)
T 2nm0_A 61 FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLR----- 135 (253)
T ss_dssp SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 57789999999999999999999999999999999998765555554 666777766666666666666665532
Q ss_pred EEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHH
Q psy2266 90 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCH 169 (313)
Q Consensus 90 ~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 169 (313)
T Consensus 136 -------------------------------------------------------------------------------- 135 (253)
T 2nm0_A 136 -------------------------------------------------------------------------------- 135 (253)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHH
Q psy2266 170 ILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKL 249 (313)
Q Consensus 170 ~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l 249 (313)
++.|+||++||..+.... .+...|++||+|+..+
T Consensus 136 ------~~~g~iv~isS~~~~~~~----------------------------------------~~~~~Y~asK~a~~~~ 169 (253)
T 2nm0_A 136 ------AKKGRVVLISSVVGLLGS----------------------------------------AGQANYAASKAGLVGF 169 (253)
T ss_dssp ------HTCEEEEEECCCCCCCCH----------------------------------------HHHHHHHHHHHHHHHH
T ss_pred ------cCCCEEEEECchhhCCCC----------------------------------------CCcHHHHHHHHHHHHH
Confidence 123567777776654311 1124599999999999
Q ss_pred HHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 250 SFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 250 ~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++.++.++++. ||+||+|+||+|+|++.+.
T Consensus 170 ~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~ 199 (253)
T 2nm0_A 170 ARSLARELGSR----NITFNVVAPGFVDTDMTKV 199 (253)
T ss_dssp HHHHHHHHCSS----SEEEEEEEECSBCC-----
T ss_pred HHHHHHHhhhc----CeEEEEEEeCcCcCcchhh
Confidence 99999988766 9999999999999999654
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.9e-23 Score=192.15 Aligned_cols=139 Identities=21% Similarity=0.223 Sum_probs=109.7
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC--CCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA--PGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~--~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
++.++.||++|.++++++++.+.+++|++|+||||||+....+ +.+.+ ++|++++++|+.+++.+++++.|.|++
T Consensus 79 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-- 156 (297)
T 1xhl_A 79 KINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIK-- 156 (297)
T ss_dssp GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--
T ss_pred eEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh--
Confidence 7889999999999999999999999999999999999876554 54554 777877777777777777776666532
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 157 -------------------------------------------------------------------------------- 156 (297)
T 1xhl_A 157 -------------------------------------------------------------------------------- 156 (297)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
++|+||++||..+.... ..+...|++||+|+
T Consensus 157 ----------~~g~IV~isS~~~~~~~---------------------------------------~~~~~~Y~asKaa~ 187 (297)
T 1xhl_A 157 ----------TKGEIVNVSSIVAGPQA---------------------------------------HSGYPYYACAKAAL 187 (297)
T ss_dssp ----------TTCEEEEECCGGGSSSC---------------------------------------CTTSHHHHHHHHHH
T ss_pred ----------cCCEEEEEcCchhccCC---------------------------------------CCCcchHHHHHHHH
Confidence 12566666666554310 02334699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+++.++.++++. ||+||+|+||+|+|++...
T Consensus 188 ~~l~~~la~el~~~----gI~v~~v~PG~v~T~~~~~ 220 (297)
T 1xhl_A 188 DQYTRCTAIDLIQH----GVRVNSVSPGAVATGFMGA 220 (297)
T ss_dssp HHHHHHHHHHHGGG----TCEEEEEEECCBCSSHHHH
T ss_pred HHHHHHHHHHhccc----CeEEEEEeeCCCcCccccc
Confidence 99999999998876 9999999999999998654
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-23 Score=190.11 Aligned_cols=90 Identities=19% Similarity=0.308 Sum_probs=76.4
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+..+.++.+++||++|.++++++++.+.+++|+||+||||||+.... .....++|++++++|+.+++.++|++.|.|++
T Consensus 67 ~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 145 (287)
T 3pxx_A 67 EKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLG-AHLPVQAFADAFDVDFVGVINTVHAALPYLTS 145 (287)
T ss_dssp HHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT
T ss_pred HhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCccc-CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc
Confidence 34577899999999999999999999999999999999999997655 33223999999999999999999988888877
Q ss_pred CceEEEEeccc
Q psy2266 85 HARVVNVASKL 95 (313)
Q Consensus 85 ~g~IV~isS~~ 95 (313)
+++||++||..
T Consensus 146 ~g~iv~isS~~ 156 (287)
T 3pxx_A 146 GASIITTGSVA 156 (287)
T ss_dssp TCEEEEECCHH
T ss_pred CcEEEEeccch
Confidence 77777777754
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.5e-23 Score=188.53 Aligned_cols=83 Identities=12% Similarity=0.176 Sum_probs=65.5
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC----CCCCC-hh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD----TAPGS-FG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~----~~~~~-~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
..+++||++|+++++++++.+.+++|++|+||||||+... .++.+ .+ ++|++.+++|+.+++.+++++.|.|++
T Consensus 61 ~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 140 (265)
T 1qsg_A 61 DIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP 140 (265)
T ss_dssp CCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred cEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 4788999999999999999999999999999999998763 34444 44 889999988888888877777776654
Q ss_pred CceEEEEec
Q psy2266 85 HARVVNVAS 93 (313)
Q Consensus 85 ~g~IV~isS 93 (313)
+|+||++||
T Consensus 141 ~g~iv~isS 149 (265)
T 1qsg_A 141 GSALLTLSY 149 (265)
T ss_dssp EEEEEEEEC
T ss_pred CCEEEEEcc
Confidence 444444444
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5e-23 Score=186.70 Aligned_cols=164 Identities=18% Similarity=0.140 Sum_probs=118.6
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHH--HcCCCc--EEEECCCCCCC--CCCCC-hh-HHHHHHHhHHHHHHHHHHHHHH
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQT--QHGGLD--LLVNNAGIYRD--TAPGS-FG-QRAETTLATNFFALVTVCHILF 79 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~--~~g~iD--ilVnNAGi~~~--~~~~~-~~-~~~~~~~~vNl~~~i~l~ra~~ 79 (313)
+.++.+++||++|+++++++++.+.+ .+|++| +||||||+... .++.+ .+ ++|++++++|+.+++.++|++.
T Consensus 59 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 138 (259)
T 1oaa_A 59 DLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTL 138 (259)
T ss_dssp TSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCeEEEEecCCCCHHHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788999999999999999999988 778999 99999998653 34444 34 7888888888888887777777
Q ss_pred hcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhc
Q psy2266 80 PLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLAT 159 (313)
Q Consensus 80 ~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~ 159 (313)
|.|++..
T Consensus 139 ~~~~~~~------------------------------------------------------------------------- 145 (259)
T 1oaa_A 139 NAFQDSP------------------------------------------------------------------------- 145 (259)
T ss_dssp HTSCCCT-------------------------------------------------------------------------
T ss_pred HHHhhcc-------------------------------------------------------------------------
Confidence 7765420
Q ss_pred ccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCch
Q psy2266 160 NFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSY 239 (313)
Q Consensus 160 N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 239 (313)
.++|+||++||..+... ..+..+|
T Consensus 146 ----------------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y 169 (259)
T 1oaa_A 146 ----------------GLSKTVVNISSLCALQP----------------------------------------YKGWGLY 169 (259)
T ss_dssp ----------------TCEEEEEEECCGGGTSC----------------------------------------CTTCHHH
T ss_pred ----------------CCCceEEEEcCchhcCC----------------------------------------CCCccHH
Confidence 01266777777766541 2234569
Q ss_pred hhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccC--CCCcchhhhhhhhhhcccCCc
Q psy2266 240 SVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG--VLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 240 ~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~l~r~~~ 306 (313)
++||+|+..|++.++.++. +|+||+|+||+|+|+|.+... ...++..+......|++|+++
T Consensus 170 ~asKaa~~~~~~~la~e~~------~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 232 (259)
T 1oaa_A 170 CAGKAARDMLYQVLAAEEP------SVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVD 232 (259)
T ss_dssp HHHHHHHHHHHHHHHHHCT------TEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBC
T ss_pred HHHHHHHHHHHHHHHhhCC------CceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCC
Confidence 9999999999999888874 399999999999999865421 011222223334456666654
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-23 Score=191.16 Aligned_cols=137 Identities=18% Similarity=0.181 Sum_probs=106.6
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+..+..+.+|+++++++++++ +++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 60 ~~~~~~~~~D~~~~~~~~~~~----~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-- 133 (267)
T 3t4x_A 60 DAILQPVVADLGTEQGCQDVI----EKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIE-- 133 (267)
T ss_dssp TCEEEEEECCTTSHHHHHHHH----HHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--
T ss_pred CceEEEEecCCCCHHHHHHHH----HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--
Confidence 456778899999999887665 4689999999999998776666655 788888877777777777777776643
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 134 -------------------------------------------------------------------------------- 133 (267)
T 3t4x_A 134 -------------------------------------------------------------------------------- 133 (267)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
++.|+||++||..+... ..+..+|++||+|+
T Consensus 134 ---------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asKaa~ 164 (267)
T 3t4x_A 134 ---------RKEGRVIFIASEAAIMP----------------------------------------SQEMAHYSATKTMQ 164 (267)
T ss_dssp ---------TTEEEEEEECCGGGTSC----------------------------------------CTTCHHHHHHHHHH
T ss_pred ---------CCCCEEEEEcchhhccC----------------------------------------CCcchHHHHHHHHH
Confidence 12266777777666541 23345699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..|++.++.++++. ||+||+|+||+|+|++.+.
T Consensus 165 ~~l~~~la~e~~~~----gi~vn~v~PG~v~t~~~~~ 197 (267)
T 3t4x_A 165 LSLSRSLAELTTGT----NVTVNTIMPGSTLTEGVET 197 (267)
T ss_dssp HHHHHHHHHHTTTS----EEEEEEEEECCBCCHHHHH
T ss_pred HHHHHHHHHHhCCC----CeEEEEEeCCeecCccHHH
Confidence 99999999888766 9999999999999997653
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5.7e-23 Score=184.36 Aligned_cols=139 Identities=19% Similarity=0.181 Sum_probs=109.8
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
+..+++|++| ++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++.
T Consensus 45 ~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~---- 119 (239)
T 2ekp_A 45 AVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA---- 119 (239)
T ss_dssp CEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----
T ss_pred cEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----
Confidence 6778999999 999999999999999999999999998766666665 8888888888888877777777766431
Q ss_pred EEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHH
Q psy2266 90 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCH 169 (313)
Q Consensus 90 ~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 169 (313)
T Consensus 120 -------------------------------------------------------------------------------- 119 (239)
T 2ekp_A 120 -------------------------------------------------------------------------------- 119 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHH
Q psy2266 170 ILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKL 249 (313)
Q Consensus 170 ~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l 249 (313)
+.|+||++||..+.... ...+...|++||+++..+
T Consensus 120 -------~~g~iv~isS~~~~~~~--------------------------------------~~~~~~~Y~~sK~a~~~~ 154 (239)
T 2ekp_A 120 -------GWGRVLFIGSVTTFTAG--------------------------------------GPVPIPAYTTAKTALLGL 154 (239)
T ss_dssp -------TCEEEEEECCGGGTSCC--------------------------------------TTSCCHHHHHHHHHHHHH
T ss_pred -------CCcEEEEECchhhccCC--------------------------------------CCCCCccHHHHHHHHHHH
Confidence 12556666665554311 002334699999999999
Q ss_pred HHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 250 SFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 250 ~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++.++.++++. ||+||+|+||+|+|++...
T Consensus 155 ~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 184 (239)
T 2ekp_A 155 TRALAKEWARL----GIRVNLLCPGYVETEFTLP 184 (239)
T ss_dssp HHHHHHHHGGG----TEEEEEEEECSBCSGGGHH
T ss_pred HHHHHHHhhhc----CcEEEEEEeCCccCchhhc
Confidence 99999998876 9999999999999998654
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.4e-22 Score=179.85 Aligned_cols=202 Identities=40% Similarity=0.619 Sum_probs=142.7
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCCh-hHHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF-GQRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~-~~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.++.+|++|.++++++++.+.+++|++|+||||||+......... .++|++++++|+.+++.+++++.+.|++
T Consensus 52 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~- 130 (276)
T 1wma_A 52 EGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP- 130 (276)
T ss_dssp TTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-
T ss_pred cCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC-
Confidence 36678899999999999999999999999999999999998764433333 2666777766666666666665555544
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 131 -------------------------------------------------------------------------------- 130 (276)
T 1wma_A 131 -------------------------------------------------------------------------------- 130 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCcccccc-ccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYN-VPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+|+||++||..+.... ...+..........++++.+......+.+....+.....+++...|++||+
T Consensus 131 ------------~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 198 (276)
T 1wma_A 131 ------------QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKI 198 (276)
T ss_dssp ------------EEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHH
T ss_pred ------------CCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHH
Confidence 3455555555443210 001122223334455666666667777777766665655666667999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLL 301 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l 301 (313)
++..+++.+++++..+-...||+||+|+||+|.|+|.+.....++++.+....++..
T Consensus 199 a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~a~~~~~l~~ 255 (276)
T 1wma_A 199 GVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLAL 255 (276)
T ss_dssp HHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTCSBCHHHHTHHHHHHHS
T ss_pred HHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCccccCChhHhhhhHhhhhc
Confidence 999999999999876211139999999999999999876556778888777666643
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-22 Score=181.43 Aligned_cols=157 Identities=20% Similarity=0.197 Sum_probs=117.0
Q ss_pred CceeEEEeec--CCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 9 NNVRFHQLDI--LDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 9 ~~~~~~~~Dv--s~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.++.++.+|+ ++.++++++++.+.+++|++|+||||||+... .++.+++ ++|++++++|+.+++.++|++.|.|++
T Consensus 64 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 143 (247)
T 3i1j_A 64 PQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKR 143 (247)
T ss_dssp CCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred CCceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 4567777887 99999999999999999999999999998643 4555555 788888877777777777777666644
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 144 ~------------------------------------------------------------------------------- 144 (247)
T 3i1j_A 144 S------------------------------------------------------------------------------- 144 (247)
T ss_dssp S-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+.|+||++||..+... ..+..+|++||+
T Consensus 145 ------------~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~ 172 (247)
T 3i1j_A 145 ------------EDASIAFTSSSVGRKG----------------------------------------RANWGAYGVSKF 172 (247)
T ss_dssp ------------SSEEEEEECCGGGTSC----------------------------------------CTTCHHHHHHHH
T ss_pred ------------CCCeEEEEcchhhcCC----------------------------------------CCCcchhHHHHH
Confidence 1256777777666541 233456999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc-------CCCCcchhhhhhhhh
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK-------GVLTPEQGKIRQKIY 299 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~~ 299 (313)
|+..|++.++.++.. ..||+||+|+||+|+|+|.... ....|++.+....++
T Consensus 173 a~~~~~~~la~e~~~---~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~dva~~~~~l 231 (247)
T 3i1j_A 173 ATEGLMQTLADELEG---VTAVRANSINPGATRTGMRAQAYPDENPLNNPAPEDIMPVYLYL 231 (247)
T ss_dssp HHHHHHHHHHHHHTT---TSSEEEEEEECCCCSSHHHHHHSTTSCGGGSCCGGGGTHHHHHH
T ss_pred HHHHHHHHHHHHhcC---CCCeEEEEEecCcccCccchhcccccCccCCCCHHHHHHHHHHH
Confidence 999999999999864 1399999999999999986542 123455555554444
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-22 Score=190.81 Aligned_cols=152 Identities=18% Similarity=0.107 Sum_probs=109.1
Q ss_pred cCCCceeEEEeecCCHH-----------------HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHH
Q psy2266 6 NNNNNVRFHQLDILDQS-----------------SIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATN 67 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~-----------------~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vN 67 (313)
..+.++.+++||++|.+ +++++++.+.+++|+||+||||||+....++.+++ +.++....
T Consensus 94 ~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~-- 171 (328)
T 2qhx_A 94 RRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVG-- 171 (328)
T ss_dssp HSTTCEEEEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------
T ss_pred hcCCeEEEEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccc--
Confidence 34677899999999999 99999999999999999999999998765554443 11111000
Q ss_pred HHHHHHHHHHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC
Q psy2266 68 FFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG 147 (313)
Q Consensus 68 l~~~i~l~ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~ 147 (313)
...
T Consensus 172 -----------------------------------------------------------------------------~~~ 174 (328)
T 2qhx_A 172 -----------------------------------------------------------------------------DRE 174 (328)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred CcchhhhhhhhcccccHHHHHHHHhhcccC--------CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHH
Q psy2266 148 SFGQRAETTLATNFFALVTVCHILFPLLRP--------HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTD 219 (313)
Q Consensus 148 ~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~--------~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (313)
...++|+.++++|+.|++.+++.++|.|++ .|+||++||..+...
T Consensus 175 ~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~--------------------------- 227 (328)
T 2qhx_A 175 AMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP--------------------------- 227 (328)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSC---------------------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccC---------------------------
Confidence 002445555555555555555555555532 478999999887651
Q ss_pred HHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 220 YVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
..+..+|++||+|+..|++.++.++++. ||+||+|+||+|+|++
T Consensus 228 -------------~~~~~~Y~asKaal~~l~~~la~el~~~----gIrvn~v~PG~v~T~~ 271 (328)
T 2qhx_A 228 -------------LLGYTIYTMAKGALEGLTRSAALELAPL----QIRVNGVGPGLSVLVD 271 (328)
T ss_dssp -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBSCCC
T ss_pred -------------CCCcHHHHHHHHHHHHHHHHHHHHHhhc----CcEEEEEecCcccCCc
Confidence 2334569999999999999999999876 9999999999999999
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=9.6e-23 Score=186.29 Aligned_cols=147 Identities=18% Similarity=0.120 Sum_probs=111.5
Q ss_pred CCceeEEEeecCCH----HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 8 NNNVRFHQLDILDQ----SSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 8 g~~~~~~~~Dvs~~----~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+.++.+++||++|. ++++++++.+.+++|++|+||||||+....++.+.+....
T Consensus 61 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~---------------------- 118 (276)
T 1mxh_A 61 AGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNG---------------------- 118 (276)
T ss_dssp TTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC----------------------------
T ss_pred CCceEEEeccCCCccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccc----------------------
Confidence 66788999999999 9999999999999999999999999876554443321000
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
.....+..++|+.++++|+.|
T Consensus 119 -----------------------------------------------------------~~~~~~~~~~~~~~~~~N~~g 139 (276)
T 1mxh_A 119 -----------------------------------------------------------AADAKPIDAQVAELFGSNAVA 139 (276)
T ss_dssp ----------------------------------------------------------------CHHHHHHHHHHHHTHH
T ss_pred -----------------------------------------------------------cccccchHHHHHHHHHhccHH
Confidence 000011125667777777777
Q ss_pred HHHHHHHHhhcccC-C------CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCC
Q psy2266 164 LVTVCHILFPLLRP-H------ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPE 236 (313)
Q Consensus 164 ~~~~~~~~~p~l~~-~------g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
++.++++++|.|++ . |+||++||..+... ..+.
T Consensus 140 ~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------------------------------~~~~ 179 (276)
T 1mxh_A 140 PLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLP----------------------------------------LPGF 179 (276)
T ss_dssp HHHHHHHHHHTC-------CCCEEEEEECCGGGGSC----------------------------------------CTTC
T ss_pred HHHHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCC----------------------------------------CCCC
Confidence 77777777777752 3 79999999988652 2334
Q ss_pred CchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccc
Q psy2266 237 FSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD 279 (313)
Q Consensus 237 ~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~ 279 (313)
..|++||+|+..|++.++.++++. ||+||+|+||+|.|+
T Consensus 180 ~~Y~asK~a~~~l~~~la~e~~~~----gi~v~~v~PG~v~t~ 218 (276)
T 1mxh_A 180 CVYTMAKHALGGLTRAAALELAPR----HIRVNAVAPGLSLLP 218 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBSCC
T ss_pred eehHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCcccCC
Confidence 569999999999999999998876 999999999999999
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.8e-23 Score=192.77 Aligned_cols=149 Identities=23% Similarity=0.309 Sum_probs=120.9
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.+++||++|.++++++++.+.+++|+||+||||||+....++.+++ ++|++++++|+.+++.++|++.+.|+
T Consensus 82 ~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 161 (322)
T 3qlj_A 82 TAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWR 161 (322)
T ss_dssp HHTTCEEEEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34577889999999999999999999999999999999999998877666666 89999999999999999998888775
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.+.
T Consensus 162 ~~~~---------------------------------------------------------------------------- 165 (322)
T 3qlj_A 162 GLSK---------------------------------------------------------------------------- 165 (322)
T ss_dssp HHHH----------------------------------------------------------------------------
T ss_pred Hccc----------------------------------------------------------------------------
Confidence 3100
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
..-.++|+||++||..+... ..+..+|++||
T Consensus 166 ---------~~~~~~g~IV~isS~~~~~~----------------------------------------~~~~~~Y~asK 196 (322)
T 3qlj_A 166 ---------AGKAVDGRIINTSSGAGLQG----------------------------------------SVGQGNYSAAK 196 (322)
T ss_dssp ---------TTCCCCEEEEEECCHHHHHC----------------------------------------BTTCHHHHHHH
T ss_pred ---------cCCCCCcEEEEEcCHHHccC----------------------------------------CCCCccHHHHH
Confidence 00011367888888776541 22335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+|+..|++.++.++++. ||+||+|+|| +.|+|...
T Consensus 197 aal~~l~~~la~e~~~~----gI~vn~v~PG-~~t~~~~~ 231 (322)
T 3qlj_A 197 AGIATLTLVGAAEMGRY----GVTVNAIAPS-ARTRMTET 231 (322)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEEC-TTSCCSCC
T ss_pred HHHHHHHHHHHHHhccc----CcEEEEecCC-CCCccchh
Confidence 99999999999999877 9999999999 99998765
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-22 Score=184.11 Aligned_cols=140 Identities=20% Similarity=0.243 Sum_probs=111.5
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.+++||++|.++++++++.+.+++|++|+||||||+....++.+++ ++|++.+++|+.+++.+++++.|.|++.
T Consensus 45 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~- 123 (264)
T 2dtx_A 45 EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRS- 123 (264)
T ss_dssp SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-
Confidence 34678899999999999999999999999999999999998766666665 8888888888888887777777766541
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 124 -------------------------------------------------------------------------------- 123 (264)
T 2dtx_A 124 -------------------------------------------------------------------------------- 123 (264)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+.|+||++||..+... ..+...|++||+++
T Consensus 124 ----------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 153 (264)
T 2dtx_A 124 ----------RDPSIVNISSVQASII----------------------------------------TKNASAYVTSKHAV 153 (264)
T ss_dssp ----------SSCEEEEECCGGGTSC----------------------------------------CTTBHHHHHHHHHH
T ss_pred ----------CCcEEEEECCchhccC----------------------------------------CCCchhHHHHHHHH
Confidence 1256666666665431 22334699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+++.++.+++ +. |+||+|+||+|+|++...
T Consensus 154 ~~~~~~la~e~~----~~-i~vn~v~PG~v~t~~~~~ 185 (264)
T 2dtx_A 154 IGLTKSIALDYA----PL-LRCNAVCPATIDTPLVRK 185 (264)
T ss_dssp HHHHHHHHHHHT----TT-SEEEEEEECSBCSHHHHH
T ss_pred HHHHHHHHHHhc----CC-cEEEEEEeCCCcCcchhh
Confidence 999988888875 34 999999999999998654
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-22 Score=184.12 Aligned_cols=139 Identities=24% Similarity=0.363 Sum_probs=111.6
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.++.+++||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 53 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--- 129 (260)
T 1nff_A 53 DAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKE--- 129 (260)
T ss_dssp GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---
T ss_pred cCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh---
Confidence 3477889999999999999999999999999999999998766666655 788888888877777777777776643
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 130 -------------------------------------------------------------------------------- 129 (260)
T 1nff_A 130 -------------------------------------------------------------------------------- 129 (260)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
.+.|+||++||..+... ..+...|++||+++.
T Consensus 130 --------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~ 161 (260)
T 1nff_A 130 --------AGRGSIINISSIEGLAG----------------------------------------TVACHGYTATKFAVR 161 (260)
T ss_dssp --------HTCEEEEEECCGGGTSC----------------------------------------CTTBHHHHHHHHHHH
T ss_pred --------cCCCEEEEEeehhhcCC----------------------------------------CCCchhHHHHHHHHH
Confidence 11256666666665431 123346999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
.+++.++.++++. ||+||+|+||+|.|++..
T Consensus 162 ~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~ 192 (260)
T 1nff_A 162 GLTKSTALELGPS----GIRVNSIHPGLVKTPMTD 192 (260)
T ss_dssp HHHHHHHHHHGGG----TEEEEEEEECCBCSGGGT
T ss_pred HHHHHHHHHhCcc----CcEEEEEEeCCCCCCccc
Confidence 9999999998876 999999999999999864
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-22 Score=184.12 Aligned_cols=140 Identities=20% Similarity=0.178 Sum_probs=103.0
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHH-cCCCcEEEECCCC--C-----CCCCCCChh-HHHHHHHhHHHHHHHHHHHHH
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQ-HGGLDLLVNNAGI--Y-----RDTAPGSFG-QRAETTLATNFFALVTVCHIL 78 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~-~g~iDilVnNAGi--~-----~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~ 78 (313)
+.++.+++||++|+++++++++.+.++ +|++|+||||||+ . ...++.+.+ ++|++++++|+.+++.+++++
T Consensus 53 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 132 (260)
T 2qq5_A 53 GGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYG 132 (260)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHH
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHH
Confidence 667889999999999999999999886 9999999999953 2 223444443 555555555555555555544
Q ss_pred HhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhh
Q psy2266 79 FPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLA 158 (313)
Q Consensus 79 ~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~ 158 (313)
.|.|++
T Consensus 133 ~~~~~~-------------------------------------------------------------------------- 138 (260)
T 2qq5_A 133 ARLMVP-------------------------------------------------------------------------- 138 (260)
T ss_dssp HHHHGG--------------------------------------------------------------------------
T ss_pred HHHHhh--------------------------------------------------------------------------
Confidence 444432
Q ss_pred cccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCc
Q psy2266 159 TNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFS 238 (313)
Q Consensus 159 ~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
++.|+||++||..+.. +.+..+
T Consensus 139 -----------------~~~g~iv~isS~~~~~-----------------------------------------~~~~~~ 160 (260)
T 2qq5_A 139 -----------------AGQGLIVVISSPGSLQ-----------------------------------------YMFNVP 160 (260)
T ss_dssp -----------------GTCCEEEEECCGGGTS-----------------------------------------CCSSHH
T ss_pred -----------------cCCcEEEEEcChhhcC-----------------------------------------CCCCCc
Confidence 1136788888877643 122346
Q ss_pred hhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 239 Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|++||+|+..+++.++.++++. ||+||+|+||+|+|+|...
T Consensus 161 Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~ 201 (260)
T 2qq5_A 161 YGVGKAACDKLAADCAHELRRH----GVSCVSLWPGIVQTELLKE 201 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGG----TCEEEEEECCCSCTTTC--
T ss_pred hHHHHHHHHHHHHHHHHHhccC----CeEEEEEecCccccHHHHH
Confidence 9999999999999999998876 9999999999999999654
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-22 Score=184.26 Aligned_cols=139 Identities=22% Similarity=0.219 Sum_probs=111.6
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.+++||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.|.|++.
T Consensus 59 ~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--- 135 (263)
T 3ak4_A 59 GGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLAS--- 135 (263)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---
T ss_pred CCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---
Confidence 578899999999999999999999999999999999998765555555 7888888888888887777777766431
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 136 -------------------------------------------------------------------------------- 135 (263)
T 3ak4_A 136 -------------------------------------------------------------------------------- 135 (263)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccC-CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 169 HILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 169 ~~~~p~l~~-~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
+ .|+||++||..+... ..+...|++||+|+.
T Consensus 136 --------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~ 167 (263)
T 3ak4_A 136 --------NTKGVIVNTASLAAKVG----------------------------------------APLLAHYSASKFAVF 167 (263)
T ss_dssp --------TCCCEEEEECCGGGTSC----------------------------------------CTTCHHHHHHHHHHH
T ss_pred --------CCCeEEEEecccccccC----------------------------------------CCCchhHHHHHHHHH
Confidence 1 256666666665431 123346999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.+++.++.++++. ||+||+|+||+|.|++...
T Consensus 168 ~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 199 (263)
T 3ak4_A 168 GWTQALAREMAPK----NIRVNCVCPGFVKTAMQER 199 (263)
T ss_dssp HHHHHHHHHHGGG----TCEEEEEEECSBTTHHHHH
T ss_pred HHHHHHHHHHhHc----CeEEEEEecccccChhhhh
Confidence 9999999998876 9999999999999998643
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=184.74 Aligned_cols=143 Identities=26% Similarity=0.256 Sum_probs=114.9
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.+++||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.|.|++
T Consensus 48 ~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 127 (281)
T 3m1a_A 48 AYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRE 127 (281)
T ss_dssp HCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566789999999999999999999999999999999999998766666665 788888877777777777776666643
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 128 -------------------------------------------------------------------------------- 127 (281)
T 3m1a_A 128 -------------------------------------------------------------------------------- 127 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.+.|+||++||..+... ..+..+|++||+
T Consensus 128 -----------~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~ 156 (281)
T 3m1a_A 128 -----------RGSGSVVNISSFGGQLS----------------------------------------FAGFSAYSATKA 156 (281)
T ss_dssp -----------HTCEEEEEECCGGGTCC----------------------------------------CTTCHHHHHHHH
T ss_pred -----------cCCCEEEEEcCccccCC----------------------------------------CCCchHHHHHHH
Confidence 11256666666665441 223456999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.++.++++. ||+||+|+||+|+|++...
T Consensus 157 a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 191 (281)
T 3m1a_A 157 ALEQLSEGLADEVAPF----GIKVLIVEPGAFRTNLFGK 191 (281)
T ss_dssp HHHHHHHHHHHHHGGG----TEEEEEEEECCBCCTTTCC
T ss_pred HHHHHHHHHHHHhhcc----CcEEEEEecCccccccccc
Confidence 9999999999998876 9999999999999998654
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=186.34 Aligned_cols=162 Identities=23% Similarity=0.280 Sum_probs=117.5
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
++.+++||++|+++++++++.+.+++|++|+||||||+... .++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 55 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--- 131 (270)
T 1yde_A 55 GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK--- 131 (270)
T ss_dssp TEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH---
T ss_pred CCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---
Confidence 37788999999999999999999999999999999998753 3454544 777777777777777777766665532
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 132 -------------------------------------------------------------------------------- 131 (270)
T 1yde_A 132 -------------------------------------------------------------------------------- 131 (270)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
++|+||++||..+... ..+...|++||+++.
T Consensus 132 ---------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asKaa~~ 162 (270)
T 1yde_A 132 ---------SQGNVINISSLVGAIG----------------------------------------QAQAVPYVATKGAVT 162 (270)
T ss_dssp ---------HTCEEEEECCHHHHHC----------------------------------------CTTCHHHHHHHHHHH
T ss_pred ---------CCCEEEEEcCccccCC----------------------------------------CCCCcccHHHHHHHH
Confidence 1356666666555431 123346999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcch---hhhhhhhhhcccCCcc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQ---GKIRQKIYLLKRTNKF 307 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~---~~~~~~~~~l~r~~~~ 307 (313)
.+++.++.++++. ||+||+|+||+|.|++.+......++. ........|++|+++.
T Consensus 163 ~~~~~la~e~~~~----gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 221 (270)
T 1yde_A 163 AMTKALALDESPY----GVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQP 221 (270)
T ss_dssp HHHHHHHHHHGGG----TCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCH
T ss_pred HHHHHHHHHhhhh----CcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCH
Confidence 9999999998876 999999999999999865421111111 1112234578887654
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-22 Score=186.52 Aligned_cols=139 Identities=22% Similarity=0.273 Sum_probs=105.1
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
.++.+++||++|.++++++++.+.+++|+||+||||||+... .++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 69 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~-- 146 (272)
T 2nwq_A 69 TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIA-- 146 (272)
T ss_dssp SCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 468889999999999999999999999999999999999763 4555554 778888877777777777776666643
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 147 -------------------------------------------------------------------------------- 146 (272)
T 2nwq_A 147 -------------------------------------------------------------------------------- 146 (272)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCC-ceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 167 VCHILFPLLRPHA-RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 167 ~~~~~~p~l~~~g-~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
++.| +||++||..+... ..+...|++||+|
T Consensus 147 ---------~~~g~~IV~isS~~~~~~----------------------------------------~~~~~~Y~asKaa 177 (272)
T 2nwq_A 147 ---------HGAGASIVNLGSVAGKWP----------------------------------------YPGSHVYGGTKAF 177 (272)
T ss_dssp ---------HCTTCEEEEECCGGGTSC----------------------------------------CTTCHHHHHHHHH
T ss_pred ---------cCCCcEEEEeCCchhccC----------------------------------------CCCCchHHHHHHH
Confidence 1124 6777777666431 2233469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+..|++.++.++++. ||+||+|+||+|+|++..
T Consensus 178 ~~~l~~~la~el~~~----gIrvn~v~PG~v~T~~~~ 210 (272)
T 2nwq_A 178 VEQFSLNLRCDLQGT----GVRVTNLEPGLCESEFSL 210 (272)
T ss_dssp HHHHHHHHHTTCTTS----CCEEEEEEECSBC-----
T ss_pred HHHHHHHHHHHhCcc----CeEEEEEEcCCCcCcchh
Confidence 999998888777655 999999999999999864
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.6e-22 Score=180.61 Aligned_cols=148 Identities=20% Similarity=0.223 Sum_probs=113.4
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCC------hh-HHHHHHHhHHHHHHHHHHHHHH
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGS------FG-QRAETTLATNFFALVTVCHILF 79 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~------~~-~~~~~~~~vNl~~~i~l~ra~~ 79 (313)
.+.++.++++|++|+++++++++.+.+++|++|+||||||+.....+.+ .+ ++|++.+++|+.+++.+++++.
T Consensus 56 ~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~ 135 (265)
T 2o23_A 56 LGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVA 135 (265)
T ss_dssp HCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred hCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3567889999999999999999999999999999999999976543322 33 7888888888888888888888
Q ss_pred hcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhc
Q psy2266 80 PLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLAT 159 (313)
Q Consensus 80 ~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~ 159 (313)
|.|++... .. .
T Consensus 136 ~~~~~~~~------------~~---~------------------------------------------------------ 146 (265)
T 2o23_A 136 GEMGQNEP------------DQ---G------------------------------------------------------ 146 (265)
T ss_dssp HHHTTSCC------------CT---T------------------------------------------------------
T ss_pred HHHHhccc------------cc---C------------------------------------------------------
Confidence 77754200 00 0
Q ss_pred ccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCch
Q psy2266 160 NFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSY 239 (313)
Q Consensus 160 N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 239 (313)
.+.++||++||..+... ..+...|
T Consensus 147 ----------------~~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y 170 (265)
T 2o23_A 147 ----------------GQRGVIINTASVAAFEG----------------------------------------QVGQAAY 170 (265)
T ss_dssp ----------------SCCEEEEEECCTHHHHC----------------------------------------CTTCHHH
T ss_pred ----------------CCCcEEEEeCChhhcCC----------------------------------------CCCCchh
Confidence 02367888888776541 2233569
Q ss_pred hhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 240 SVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 240 ~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++||+++..+++.++.++++. ||+||+|+||+|+|++.+.
T Consensus 171 ~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 210 (265)
T 2o23_A 171 SASKGGIVGMTLPIARDLAPI----GIRVMTIAPGLFGTPLLTS 210 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCC----
T ss_pred HHHHHHHHHHHHHHHHHHhhc----CcEEEEEEeccccCccccc
Confidence 999999999999999998876 9999999999999998764
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-22 Score=188.81 Aligned_cols=145 Identities=23% Similarity=0.239 Sum_probs=112.8
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.++.||++|.++++++++.+.+++|+||+||||||+....++.+.+ ++|++++++|+.|++.+++++.|.|++..
T Consensus 60 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-- 137 (319)
T 3ioy_A 60 EVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERV-- 137 (319)
T ss_dssp GEEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH--
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhh--
Confidence 788999999999999999999999999999999999998777766665 88888888888888888888777664310
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 138 -------------------------------------------------------------------------------- 137 (319)
T 3ioy_A 138 -------------------------------------------------------------------------------- 137 (319)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
.+.-.++|+||++||.++... ..+..+|++||+|+..
T Consensus 138 ---~~~~~~~g~iV~isS~a~~~~----------------------------------------~~~~~~Y~aSKaal~~ 174 (319)
T 3ioy_A 138 ---KAGEQKGGHVVNTASMAAFLA----------------------------------------AGSPGIYNTTKFAVRG 174 (319)
T ss_dssp ---HTTSCCCCEEEEECCGGGTCC----------------------------------------CSSSHHHHHHHHHHHH
T ss_pred ---hccCCCCcEEEEecccccccC----------------------------------------CCCCHHHHHHHHHHHH
Confidence 000012478888888887652 2233569999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|++.++.++.+. ||+|++|+||+|+|++...
T Consensus 175 ~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~ 205 (319)
T 3ioy_A 175 LSESLHYSLLKY----EIGVSVLCPGLVKSYIYAS 205 (319)
T ss_dssp HHHHHHHHHGGG----TCEEEEECCCCBC------
T ss_pred HHHHHHHHhhhc----CCEEEEEEcCeEccCcccc
Confidence 999999998876 9999999999999998764
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-22 Score=179.90 Aligned_cols=142 Identities=22% Similarity=0.332 Sum_probs=112.4
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.++++|++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 49 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~- 127 (244)
T 1edo_A 49 YGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMK- 127 (244)
T ss_dssp HTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-
T ss_pred cCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-
Confidence 366788899999999999999999999999999999999998766555554 777777777777777777766665533
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 128 -------------------------------------------------------------------------------- 127 (244)
T 1edo_A 128 -------------------------------------------------------------------------------- 127 (244)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
++.++||++||..+... ..+...|++||++
T Consensus 128 ----------~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~a 157 (244)
T 1edo_A 128 ----------KRKGRIINIASVVGLIG----------------------------------------NIGQANYAAAKAG 157 (244)
T ss_dssp ----------HTCEEEEEECCTHHHHC----------------------------------------CTTCHHHHHHHHH
T ss_pred ----------cCCCEEEEECChhhcCC----------------------------------------CCCCccchhhHHH
Confidence 12256777777665431 2233569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.++.++... ||++|+|+||+|.|++...
T Consensus 158 ~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 191 (244)
T 1edo_A 158 VIGFSKTAAREGASR----NINVNVVCPGFIASDMTAK 191 (244)
T ss_dssp HHHHHHHHHHHHHTT----TEEEEEEEECSBCSHHHHT
T ss_pred HHHHHHHHHHHhhhc----CCEEEEEeeCccccchhhh
Confidence 999999999998765 9999999999999998765
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.2e-23 Score=184.07 Aligned_cols=130 Identities=18% Similarity=0.143 Sum_probs=103.1
Q ss_pred ecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC---CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEe
Q psy2266 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD---TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 92 (313)
Q Consensus 17 Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~---~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~is 92 (313)
|+.|.++++++++.+.+++|++|+||||||+... .++.+++ ++|++++++|+.+++.++|++.|.|++.
T Consensus 52 ~~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~------- 124 (244)
T 1zmo_A 52 IALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA------- 124 (244)
T ss_dssp EECCCCCGGGHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-------
T ss_pred cccCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------
Confidence 4447778889999999999999999999999876 6666665 8888888888888877777777766431
Q ss_pred cccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHh
Q psy2266 93 SKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILF 172 (313)
Q Consensus 93 S~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~ 172 (313)
T Consensus 125 -------------------------------------------------------------------------------- 124 (244)
T 1zmo_A 125 -------------------------------------------------------------------------------- 124 (244)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHH
Q psy2266 173 PLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFI 252 (313)
Q Consensus 173 p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~ 252 (313)
+.|+||++||..+... ..+...|++||+|+..|++.
T Consensus 125 ----~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK~a~~~~~~~ 160 (244)
T 1zmo_A 125 ----GGASVIFITSSVGKKP----------------------------------------LAYNPLYGPARAATVALVES 160 (244)
T ss_dssp ----TCEEEEEECCGGGTSC----------------------------------------CTTCTTHHHHHHHHHHHHHH
T ss_pred ----CCcEEEEECChhhCCC----------------------------------------CCCchHHHHHHHHHHHHHHH
Confidence 1256666666665431 22335699999999999999
Q ss_pred HHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 253 QHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 253 ~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
++.++++. ||+||+|+||+|+|+|.
T Consensus 161 la~e~~~~----gi~v~~v~PG~v~T~~~ 185 (244)
T 1zmo_A 161 AAKTLSRD----GILLYAIGPNFFNNPTY 185 (244)
T ss_dssp HHHHHGGG----TEEEEEEEESSBCBTTT
T ss_pred HHHHHhhc----CcEEEEEeeCCCcCCcc
Confidence 99998876 99999999999999997
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=9.8e-23 Score=188.51 Aligned_cols=73 Identities=10% Similarity=0.256 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHcCCCcEEEECCCCCC--CCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEec
Q psy2266 21 QSSIHKLHDDIQTQHGGLDLLVNNAGIYR--DTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNVAS 93 (313)
Q Consensus 21 ~~~v~~~~~~v~~~~g~iDilVnNAGi~~--~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS 93 (313)
+++++++++.+.+++|+||+||||||+.. ..++.+.+ ++|++++++|+.+++.++|++.|.|+++|+||+++|
T Consensus 103 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS 178 (297)
T 1d7o_A 103 NWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTY 178 (297)
T ss_dssp CCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEec
Confidence 67899999999999999999999999864 34555555 899999988888888888877777655444444444
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-22 Score=178.64 Aligned_cols=77 Identities=17% Similarity=0.318 Sum_probs=64.9
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
..+.++.+++||++|+++++++++.+.+++|++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|
T Consensus 49 ~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 126 (235)
T 3l77_A 49 EQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSL 126 (235)
T ss_dssp HHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4467889999999999999999999999999999999999998877777666 8888888777777777777777666
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=8.7e-23 Score=190.88 Aligned_cols=74 Identities=11% Similarity=0.164 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHcCCCcEEEECCCCCC--CCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEecc
Q psy2266 21 QSSIHKLHDDIQTQHGGLDLLVNNAGIYR--DTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNVASK 94 (313)
Q Consensus 21 ~~~v~~~~~~v~~~~g~iDilVnNAGi~~--~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS~ 94 (313)
.++++++++.+.++||+||+||||||+.. ..++.+++ ++|++++++|+.+++.++|++.|.|+++|+||+++|.
T Consensus 104 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~ 180 (315)
T 2o2s_A 104 GYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYL 180 (315)
T ss_dssp CCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEG
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 66899999999999999999999999864 34555555 8999999888888888888777776554555555543
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.87 E-value=5.4e-22 Score=195.37 Aligned_cols=139 Identities=27% Similarity=0.422 Sum_probs=109.8
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCC-CcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGG-LDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~-iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
+.++.||++|.++++++++.+.+++|+ ||+||||||+.....+.+++ ++|++++++|+.+++.+++++.+.|++
T Consensus 261 ~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~---- 336 (454)
T 3u0b_A 261 GTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTI---- 336 (454)
T ss_dssp CEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSS----
T ss_pred CeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh----
Confidence 467899999999999999999999986 99999999999877776666 888888888888888777777776643
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 337 -------------------------------------------------------------------------------- 336 (454)
T 3u0b_A 337 -------------------------------------------------------------------------------- 336 (454)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
++.++||++||.++.. +..+...|++||+++..
T Consensus 337 -------~~~g~iV~iSS~a~~~----------------------------------------g~~g~~~YaasKaal~~ 369 (454)
T 3u0b_A 337 -------GEGGRVIGLSSMAGIA----------------------------------------GNRGQTNYATTKAGMIG 369 (454)
T ss_dssp -------CTTCEEEEECCHHHHH----------------------------------------CCTTCHHHHHHHHHHHH
T ss_pred -------cCCCEEEEEeChHhCC----------------------------------------CCCCCHHHHHHHHHHHH
Confidence 1236677777766654 12344569999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
|++.++.++.+. ||+||+|+||+|+|+|.+..
T Consensus 370 l~~~la~e~~~~----gI~vn~v~PG~v~T~~~~~~ 401 (454)
T 3u0b_A 370 LAEALAPVLADK----GITINAVAPGFIETKMTEAI 401 (454)
T ss_dssp HHHHHHHHHHTT----TCEEEEEEECSBCC------
T ss_pred HHHHHHHHhhhc----CcEEEEEEcCcccChhhhhc
Confidence 999999998876 99999999999999998763
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.87 E-value=7.7e-22 Score=178.94 Aligned_cols=142 Identities=22% Similarity=0.270 Sum_probs=101.2
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHc-CCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQH-GGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~-g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++.++.+|++|.++++++++.+.+++ |++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.|.|++
T Consensus 61 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~ 140 (266)
T 1xq1_A 61 KGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKA 140 (266)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 46678899999999999999999999999 8999999999997766555555 888888888888888777777776643
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 141 -------------------------------------------------------------------------------- 140 (266)
T 1xq1_A 141 -------------------------------------------------------------------------------- 140 (266)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.+.++||++||..+... ..+...|++||+
T Consensus 141 -----------~~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~ 169 (266)
T 1xq1_A 141 -----------SGCGNIIFMSSIAGVVS----------------------------------------ASVGSIYSATKG 169 (266)
T ss_dssp -----------HSSCEEEEEC--------------------------------------------------CCHHHHHHH
T ss_pred -----------cCCcEEEEEccchhccC----------------------------------------CCCCchHHHHHH
Confidence 11256666666665431 123356999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.++.++++. ||++|+|+||+|.|++.+.
T Consensus 170 a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 204 (266)
T 1xq1_A 170 ALNQLARNLACEWASD----GIRANAVAPAVIATPLAEA 204 (266)
T ss_dssp HHHHHHHHHHHHHGGG----TCEEEEEECCSCC------
T ss_pred HHHHHHHHHHHHHhHh----CcEEEEEeeCCCccchhhh
Confidence 9999999999998766 9999999999999998664
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.7e-22 Score=180.48 Aligned_cols=159 Identities=21% Similarity=0.269 Sum_probs=100.1
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.++.||+++.++++++++ +++++|+||||||+.....+.+.+ ++|++++++|+.+++.+++++.|.|++
T Consensus 57 ~~~~~~~~~~~D~~~~~~~~~~~~----~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 132 (249)
T 3f9i_A 57 ALKDNYTIEVCNLANKEECSNLIS----KTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQ 132 (249)
T ss_dssp HHCSSEEEEECCTTSHHHHHHHHH----TCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HhccCccEEEcCCCCHHHHHHHHH----hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344567888999999999877765 458999999999998766554444 666666666666666655555554432
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 133 -------------------------------------------------------------------------------- 132 (249)
T 3f9i_A 133 -------------------------------------------------------------------------------- 132 (249)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
++.|+||++||..+... ..+..+|++||+
T Consensus 133 -----------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~ 161 (249)
T 3f9i_A 133 -----------KRYGRIINISSIVGIAG----------------------------------------NPGQANYCASKA 161 (249)
T ss_dssp -----------HTCEEEEEECCCCC--C----------------------------------------CSCSHHHHHHHH
T ss_pred -----------CCCcEEEEEccHHhccC----------------------------------------CCCCchhHHHHH
Confidence 12367777777776541 223456999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
|+..+++.++.+++++ ||+||+|+||+|+|++.+.. .++.........|++|++.
T Consensus 162 a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~ 216 (249)
T 3f9i_A 162 GLIGMTKSLSYEVATR----GITVNAVAPGFIKSDMTDKL---NEKQREAIVQKIPLGTYGI 216 (249)
T ss_dssp HHHHHHHHHHHHHGGG----TEEEEEEEECCBC------C---CHHHHHHHHHHCTTCSCBC
T ss_pred HHHHHHHHHHHHHHHc----CcEEEEEecCccccCccccc---CHHHHHHHHhcCCCCCCcC
Confidence 9999999999998876 99999999999999997663 3333333444455665543
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=9.6e-22 Score=175.90 Aligned_cols=142 Identities=23% Similarity=0.247 Sum_probs=112.3
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.++++|++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.|.|++
T Consensus 56 ~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~- 134 (244)
T 2bd0_A 56 EGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMER- 134 (244)
T ss_dssp TTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-
T ss_pred cCCeeeEEEecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-
Confidence 466788999999999999999999999999999999999998665555554 777777777777777777776666533
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 135 -------------------------------------------------------------------------------- 134 (244)
T 2bd0_A 135 -------------------------------------------------------------------------------- 134 (244)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
.+.++||++||..+... ..+...|++||++
T Consensus 135 ----------~~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a 164 (244)
T 2bd0_A 135 ----------QHSGHIFFITSVAATKA----------------------------------------FRHSSIYCMSKFG 164 (244)
T ss_dssp ----------HTCEEEEEECCGGGTSC----------------------------------------CTTCHHHHHHHHH
T ss_pred ----------CCCCEEEEEecchhcCC----------------------------------------CCCCchhHHHHHH
Confidence 11256666666665431 2233469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.++.++.+. ||++++|+||+|.|++...
T Consensus 165 ~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 198 (244)
T 2bd0_A 165 QRGLVETMRLYARKC----NVRITDVQPGAVYTPMWGK 198 (244)
T ss_dssp HHHHHHHHHHHHTTT----TEEEEEEEECCBCSTTTCC
T ss_pred HHHHHHHHHHHhhcc----CcEEEEEECCCccchhhhh
Confidence 999999998888765 9999999999999999765
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=9.9e-22 Score=180.89 Aligned_cols=143 Identities=27% Similarity=0.359 Sum_probs=109.0
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.++.||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 90 ~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 169 (285)
T 2c07_A 90 SFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMIN 169 (285)
T ss_dssp TTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred hcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 3467788999999999999999999999999999999999998766665555 777777777776666666666665532
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 170 -------------------------------------------------------------------------------- 169 (285)
T 2c07_A 170 -------------------------------------------------------------------------------- 169 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.+.++||++||..+... ..+...|++||+
T Consensus 170 -----------~~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK~ 198 (285)
T 2c07_A 170 -----------NRYGRIINISSIVGLTG----------------------------------------NVGQANYSSSKA 198 (285)
T ss_dssp -----------HTCEEEEEECCTHHHHC----------------------------------------CTTCHHHHHHHH
T ss_pred -----------CCCCEEEEECChhhccC----------------------------------------CCCCchHHHHHH
Confidence 11256777777665431 123346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.++.++.+. ||+||+|+||+|+|++...
T Consensus 199 a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 233 (285)
T 2c07_A 199 GVIGFTKSLAKELASR----NITVNAIAPGFISSDMTDK 233 (285)
T ss_dssp HHHHHHHHHHHHHGGG----TEEEEEEEECSBCC-----
T ss_pred HHHHHHHHHHHHHHHh----CcEEEEEEeCcEecCchhh
Confidence 9999999999998866 9999999999999998654
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.7e-22 Score=177.99 Aligned_cols=143 Identities=23% Similarity=0.338 Sum_probs=96.9
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.++.+|++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 52 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 131 (247)
T 2hq1_A 52 AAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLK 131 (247)
T ss_dssp HTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred hcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 3467788999999999999999999999999999999999987655554444 566666666666665555555554432
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 132 -------------------------------------------------------------------------------- 131 (247)
T 2hq1_A 132 -------------------------------------------------------------------------------- 131 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
.+.++||++||..+... ..+...|++||+
T Consensus 132 -----------~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~ 160 (247)
T 2hq1_A 132 -----------QKSGKIINITSIAGIIG----------------------------------------NAGQANYAASKA 160 (247)
T ss_dssp -----------HTCEEEEEECC-------------------------------------------------CHHHHHHHH
T ss_pred -----------cCCcEEEEEcChhhccC----------------------------------------CCCCcHhHHHHH
Confidence 11267777777665431 122346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.++.++... ||++|+|+||++.|++...
T Consensus 161 a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 195 (247)
T 2hq1_A 161 GLIGFTKSIAKEFAAK----GIYCNAVAPGIIKTDMTDV 195 (247)
T ss_dssp HHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHT
T ss_pred HHHHHHHHHHHHHHHc----CcEEEEEEEEEEeccchhh
Confidence 9999999999998866 9999999999999998654
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.7e-23 Score=192.83 Aligned_cols=74 Identities=11% Similarity=0.231 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHcCCCcEEEECCCCCC--CCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEecc
Q psy2266 21 QSSIHKLHDDIQTQHGGLDLLVNNAGIYR--DTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNVASK 94 (313)
Q Consensus 21 ~~~v~~~~~~v~~~~g~iDilVnNAGi~~--~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS~ 94 (313)
+++++++++.+.++||+||+||||||+.. ..++.+.+ ++|++++++|+.+++.++|++.|.|+++|+||+++|.
T Consensus 117 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~ 193 (319)
T 2ptg_A 117 GFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYI 193 (319)
T ss_dssp CCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEecc
Confidence 45899999999999999999999999864 34555555 8999999888888888888777777554555555543
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=175.96 Aligned_cols=142 Identities=23% Similarity=0.303 Sum_probs=110.6
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC---CCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA---PGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~---~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
.+.++.+++||++|.++++++++.+.+++|++|+||||||+....+ +.+.+ ++|++.+++|+.+++.+++++.|.|
T Consensus 50 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 129 (250)
T 2cfc_A 50 YADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHM 129 (250)
T ss_dssp TGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999999999999876544 44444 6777777777777776666666655
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++
T Consensus 130 ~~------------------------------------------------------------------------------ 131 (250)
T 2cfc_A 130 LL------------------------------------------------------------------------------ 131 (250)
T ss_dssp HH------------------------------------------------------------------------------
T ss_pred Hh------------------------------------------------------------------------------
Confidence 33
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
.+.++||++||..+... ..+...|++|
T Consensus 132 -------------~~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~~s 158 (250)
T 2cfc_A 132 -------------QGAGVIVNIASVASLVA----------------------------------------FPGRSAYTTS 158 (250)
T ss_dssp -------------HTCEEEEEECCGGGTSC----------------------------------------CTTCHHHHHH
T ss_pred -------------CCCCEEEEECChhhccC----------------------------------------CCCchhHHHH
Confidence 11256777777665431 1233469999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|+++..+++.++.++.+. ||++|+|+||+|.|++...
T Consensus 159 K~a~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~~ 195 (250)
T 2cfc_A 159 KGAVLQLTKSVAVDYAGS----GIRCNAVCPGMIETPMTQW 195 (250)
T ss_dssp HHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSTTTHH
T ss_pred HHHHHHHHHHHHHHhccc----CeEEEEEEeCcCccCcccc
Confidence 999999999999998766 9999999999999998654
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-21 Score=177.28 Aligned_cols=144 Identities=18% Similarity=0.189 Sum_probs=112.8
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.++.||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 54 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 133 (261)
T 1gee_A 54 KVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVE 133 (261)
T ss_dssp HTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 3466788999999999999999999999999999999999997655555544 778888877777777777777666543
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.+
T Consensus 134 ~~------------------------------------------------------------------------------ 135 (261)
T 1gee_A 134 ND------------------------------------------------------------------------------ 135 (261)
T ss_dssp TT------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 10
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
..++||++||..+... ..+...|++||+
T Consensus 136 ------------~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~ 163 (261)
T 1gee_A 136 ------------IKGTVINMSSVHEKIP----------------------------------------WPLFVHYAASKG 163 (261)
T ss_dssp ------------CCCEEEEECCGGGTSC----------------------------------------CTTCHHHHHHHH
T ss_pred ------------CCCEEEEeCCHHhcCC----------------------------------------CCCccHHHHHHH
Confidence 0256666666655431 223346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.++.++++. ||++|+|+||+|.|++...
T Consensus 164 a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 198 (261)
T 1gee_A 164 GMKLMTETLALEYAPK----GIRVNNIGPGAINTPINAE 198 (261)
T ss_dssp HHHHHHHHHHHHHGGG----TCEEEEEEECSBCSGGGHH
T ss_pred HHHHHHHHHHHHhccc----CeEEEEEeeCCcCCchhhh
Confidence 9999999999998766 9999999999999998654
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.2e-22 Score=178.29 Aligned_cols=83 Identities=6% Similarity=0.039 Sum_probs=67.6
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHc--CCCcEEEECCCCCCCCCC-CChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQH--GGLDLLVNNAGIYRDTAP-GSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~--g~iDilVnNAGi~~~~~~-~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
...+.+|++|+++++++++.+.+++ |++|+||||||+....++ .+.+ ++|++.+++|+.+++.+++++.|.|+++|
T Consensus 48 ~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g 127 (241)
T 1dhr_A 48 SVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGG 127 (241)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred cEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCC
Confidence 4567899999999999999999999 799999999999876665 5655 99999999888888888888777765544
Q ss_pred eEEEEec
Q psy2266 87 RVVNVAS 93 (313)
Q Consensus 87 ~IV~isS 93 (313)
+||++||
T Consensus 128 ~iv~isS 134 (241)
T 1dhr_A 128 LLTLAGA 134 (241)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 4444444
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.86 E-value=7.2e-22 Score=181.11 Aligned_cols=148 Identities=20% Similarity=0.203 Sum_probs=117.3
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEEC-CCCCCCCCC-----CChh-HHHHHHHhHHHHHHHHHHHH
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNN-AGIYRDTAP-----GSFG-QRAETTLATNFFALVTVCHI 77 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnN-AGi~~~~~~-----~~~~-~~~~~~~~vNl~~~i~l~ra 77 (313)
++.+.++.+++||++|.++++++++.+ +++|++|+|||| ||+.....+ .+.+ ++|++.+++|+.+++.++++
T Consensus 72 ~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 150 (281)
T 3ppi_A 72 DELGNRAEFVSTNVTSEDSVLAAIEAA-NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARL 150 (281)
T ss_dssp HHHCTTEEEEECCTTCHHHHHHHHHHH-TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHhCCceEEEEcCCCCHHHHHHHHHHH-HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHH
Confidence 345678899999999999999999999 889999999999 666554433 2344 88999998888888888888
Q ss_pred HHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhh
Q psy2266 78 LFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTL 157 (313)
Q Consensus 78 ~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~ 157 (313)
+.+.|++..
T Consensus 151 ~~~~~~~~~----------------------------------------------------------------------- 159 (281)
T 3ppi_A 151 VAASIAAAE----------------------------------------------------------------------- 159 (281)
T ss_dssp HHHHHHTSC-----------------------------------------------------------------------
T ss_pred HHHHHHhhc-----------------------------------------------------------------------
Confidence 888775410
Q ss_pred hcccccHHHHHHHHhhcc-cCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCC
Q psy2266 158 ATNFFALVTVCHILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPE 236 (313)
Q Consensus 158 ~~N~~g~~~~~~~~~p~l-~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
+.. +++|+||++||..+... ..+.
T Consensus 160 ---------------~~~~~~~g~iv~isS~~~~~~----------------------------------------~~~~ 184 (281)
T 3ppi_A 160 ---------------PRENGERGALVLTASIAGYEG----------------------------------------QIGQ 184 (281)
T ss_dssp ---------------CCTTSCCEEEEEECCGGGTSC----------------------------------------CTTC
T ss_pred ---------------ccccCCCeEEEEEecccccCC----------------------------------------CCCC
Confidence 000 12478888888887652 2334
Q ss_pred CchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 237 FSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 237 ~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.+|++||+|+..|++.++.++++. ||+||+|+||+|+|++.+.
T Consensus 185 ~~Y~asKaa~~~~~~~la~e~~~~----gi~v~~v~PG~v~T~~~~~ 227 (281)
T 3ppi_A 185 TAYAAAKAGVIGLTIAAARDLSSA----GIRVNTIAPGTMKTPIMES 227 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHT
T ss_pred cccHHHHHHHHHHHHHHHHHHhhc----CeEEEEEecCcCCchhhhc
Confidence 569999999999999999999876 9999999999999999775
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.86 E-value=7.7e-22 Score=185.99 Aligned_cols=139 Identities=22% Similarity=0.252 Sum_probs=104.8
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.++.||++|.++++++++.+. +|++|+||||||+....++.+++ ++|++++++|+.+++.+++++.|.|++
T Consensus 56 ~~~~~~~~~Dv~d~~~v~~~~~~~~--~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-- 131 (327)
T 1jtv_A 56 PGSLETLQLDVRDSKSVAAARERVT--EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKR-- 131 (327)
T ss_dssp TTSEEEEECCTTCHHHHHHHHHTCT--TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--
T ss_pred CCceEEEEecCCCHHHHHHHHHHHh--cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--
Confidence 4678899999999999999999883 69999999999997666665555 778888877777777777777666643
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 132 -------------------------------------------------------------------------------- 131 (327)
T 1jtv_A 132 -------------------------------------------------------------------------------- 131 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
++.|+||++||..+... ......|++||+++
T Consensus 132 ---------~~~g~IV~isS~~~~~~----------------------------------------~~~~~~Y~aSK~a~ 162 (327)
T 1jtv_A 132 ---------RGSGRVLVTGSVGGLMG----------------------------------------LPFNDVYCASKFAL 162 (327)
T ss_dssp ---------HTCEEEEEEEEGGGTSC----------------------------------------CTTCHHHHHHHHHH
T ss_pred ---------cCCCEEEEECCcccccC----------------------------------------CCCChHHHHHHHHH
Confidence 11255666666655431 12234699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..|++.++.++++. ||+||+|+||+|+|+|...
T Consensus 163 ~~~~~~la~el~~~----gI~v~~v~PG~v~T~~~~~ 195 (327)
T 1jtv_A 163 EGLCESLAVLLLPF----GVHLSLIECGPVHTAFMEK 195 (327)
T ss_dssp HHHHHHHHHHHGGG----TEEEEEEEECCBCC-----
T ss_pred HHHHHHHHHHhhhc----CcEEEEEEeCcccChHHhh
Confidence 99999999998876 9999999999999999765
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=8.7e-22 Score=177.36 Aligned_cols=135 Identities=20% Similarity=0.265 Sum_probs=104.1
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.++++|++|.++++ .+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.++|++.|.|++
T Consensus 51 ~~~~~~~D~~~~~~~~----~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~---- 122 (246)
T 2ag5_A 51 GIQTRVLDVTKKKQID----QFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLA---- 122 (246)
T ss_dssp TEEEEECCTTCHHHHH----HHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH----
T ss_pred CceEEEeeCCCHHHHH----HHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 5788999999999887 4456789999999999998766555555 778888877777777777777666543
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 123 -------------------------------------------------------------------------------- 122 (246)
T 2ag5_A 123 -------------------------------------------------------------------------------- 122 (246)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCC-CCCchhhhHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGW-PEFSYSVSKLGVA 247 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~al~ 247 (313)
++.|+||++||..+... .. +...|++||+++.
T Consensus 123 -------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~~Y~~sK~a~~ 155 (246)
T 2ag5_A 123 -------QKSGNIINMSSVASSVK----------------------------------------GVVNRCVYSTTKAAVI 155 (246)
T ss_dssp -------HTCEEEEEECCSBTTTB----------------------------------------CCTTBHHHHHHHHHHH
T ss_pred -------cCCceEEEEechHhCcC----------------------------------------CCCCCccHHHHHHHHH
Confidence 11256667776665431 11 3346999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.+++.++.++++. ||+||+|+||+|.|++...
T Consensus 156 ~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 187 (246)
T 2ag5_A 156 GLTKSVAADFIQQ----GIRCNCVCPGTVDTPSLQE 187 (246)
T ss_dssp HHHHHHHHHHGGG----TEEEEEEEESCEECHHHHH
T ss_pred HHHHHHHHHhhhc----CcEEEEEeeCcCcCcchhh
Confidence 9999999998876 9999999999999998543
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.8e-21 Score=174.25 Aligned_cols=144 Identities=22% Similarity=0.323 Sum_probs=112.4
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR-DTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~-~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+.+.++.++++|++|.++++++++.+.+++|++|+||||||+.. ..++.+.+ ++|++.+++|+.+++.+++++.+.|+
T Consensus 59 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 138 (260)
T 3awd_A 59 MEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIML 138 (260)
T ss_dssp HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHh
Confidence 34667899999999999999999999999999999999999876 44555555 77888888787777777777776664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 139 ~------------------------------------------------------------------------------- 139 (260)
T 3awd_A 139 E------------------------------------------------------------------------------- 139 (260)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
++.++||++||..+.... ...+...|++||
T Consensus 140 ------------~~~~~iv~~sS~~~~~~~--------------------------------------~~~~~~~Y~~sK 169 (260)
T 3awd_A 140 ------------QKQGVIVAIGSMSGLIVN--------------------------------------RPQQQAAYNASK 169 (260)
T ss_dssp ------------HTCEEEEEECCGGGTSCC--------------------------------------SSSCCHHHHHHH
T ss_pred ------------cCCCEEEEEecchhcccC--------------------------------------CCCCccccHHHH
Confidence 112556666665554311 011224699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+++..+++.++.++++. ||++++|+||+|.|++..
T Consensus 170 ~a~~~~~~~l~~e~~~~----gi~v~~v~pg~v~t~~~~ 204 (260)
T 3awd_A 170 AGVHQYIRSLAAEWAPH----GIRANAVAPTYIETTLTR 204 (260)
T ss_dssp HHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCTTTH
T ss_pred HHHHHHHHHHHHHhhhc----CeEEEEEEeeeeccchhh
Confidence 99999999999998766 999999999999999876
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=176.12 Aligned_cols=87 Identities=17% Similarity=0.243 Sum_probs=70.2
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC--
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP-- 84 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~-- 84 (313)
+.++.+++||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 63 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 142 (265)
T 1h5q_A 63 GVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQ 142 (265)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcC
Confidence 66788999999999999999999999999999999999998766555555 888888888888888888887777643
Q ss_pred -CceEEEEecc
Q psy2266 85 -HARVVNVASK 94 (313)
Q Consensus 85 -~g~IV~isS~ 94 (313)
+++||++||.
T Consensus 143 ~~~~iv~~sS~ 153 (265)
T 1h5q_A 143 QKGSIVVTSSM 153 (265)
T ss_dssp CCEEEEEECCG
T ss_pred CCceEEEeCCc
Confidence 2455555543
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.7e-21 Score=172.56 Aligned_cols=142 Identities=26% Similarity=0.300 Sum_probs=112.0
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.++.++.+|++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.+.|++.
T Consensus 54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-- 131 (251)
T 1zk4_A 54 DQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK-- 131 (251)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS--
T ss_pred CceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc--
Confidence 4688899999999999999999999999999999999998766665555 7888888888877777777777766541
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 132 -------------------------------------------------------------------------------- 131 (251)
T 1zk4_A 132 -------------------------------------------------------------------------------- 131 (251)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCC-CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 168 CHILFPLLRPH-ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 168 ~~~~~p~l~~~-g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+. ++||++||..+... ..+...|++||+++
T Consensus 132 ---------~~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 162 (251)
T 1zk4_A 132 ---------GLGASIINMSSIEGFVG----------------------------------------DPSLGAYNASKGAV 162 (251)
T ss_dssp ---------SSCEEEEEECCGGGTSC----------------------------------------CTTCHHHHHHHHHH
T ss_pred ---------CCCCEEEEeCCchhccC----------------------------------------CCCCccchHHHHHH
Confidence 11 45666666665431 12334699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+++.++.++..+ ++||++++|+||+|.|++.+.
T Consensus 163 ~~~~~~~a~e~~~~--~~~i~v~~v~Pg~v~t~~~~~ 197 (251)
T 1zk4_A 163 RIMSKSAALDCALK--DYDVRVNTVHPGYIKTPLVDD 197 (251)
T ss_dssp HHHHHHHHHHHHHT--TCSEEEEEEEECCBCCHHHHT
T ss_pred HHHHHHHHHHhccc--CCCeEEEEEeeCcCcchhhhh
Confidence 99999999887621 349999999999999998765
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.5e-21 Score=171.67 Aligned_cols=170 Identities=25% Similarity=0.362 Sum_probs=117.3
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcC--CCcEEEECCCCCC-CCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHG--GLDLLVNNAGIYR-DTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g--~iDilVnNAGi~~-~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+.++.++.||++|.++++++++.+.+++| ++|+||||||+.. ..++.+.+ ++|++.+++|+.+++.+++++.+.|+
T Consensus 50 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 129 (250)
T 1yo6_A 50 DSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLK 129 (250)
T ss_dssp CTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHH
T ss_pred CCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 56788999999999999999999999998 9999999999987 55555555 88888998888888888888888764
Q ss_pred CC------ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhh
Q psy2266 84 PH------ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTL 157 (313)
Q Consensus 84 ~~------g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~ 157 (313)
+. +. .
T Consensus 130 ~~~~~~~~~~-------------~-------------------------------------------------------- 140 (250)
T 1yo6_A 130 NAASKESGDQ-------------L-------------------------------------------------------- 140 (250)
T ss_dssp HHHHSSCSSC-------------C--------------------------------------------------------
T ss_pred hcccccCCCc-------------c--------------------------------------------------------
Confidence 31 00 0
Q ss_pred hcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCC
Q psy2266 158 ATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEF 237 (313)
Q Consensus 158 ~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
-...++||++||..+........ ....+..
T Consensus 141 -----------------~~~~~~iv~isS~~~~~~~~~~~---------------------------------~~~~~~~ 170 (250)
T 1yo6_A 141 -----------------SVSRAAVITISSGLGSITDNTSG---------------------------------SAQFPVL 170 (250)
T ss_dssp -----------------CTTTCEEEEECCGGGCSTTCCST---------------------------------TSSSCBH
T ss_pred -----------------cCCCcEEEEeccCccccCCcccc---------------------------------cccCCcc
Confidence 00036677777766643210000 0012345
Q ss_pred chhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhh
Q psy2266 238 SYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYL 300 (313)
Q Consensus 238 ~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~ 300 (313)
+|++||+++..+++.++.++.+. ||+|++|+||+|+|++.+.....++++.+.......
T Consensus 171 ~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~~~~~~~~~~a~~~~~~~ 229 (250)
T 1yo6_A 171 AYRMSKAAINMFGRTLAVDLKDD----NVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSF 229 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGG----TCEEEEEECCCC-------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccC----CeEEEEEcCCceecCCCCCCCCCCHHHHHHHHHHHH
Confidence 69999999999999999998766 999999999999999987655677777776655543
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.1e-21 Score=176.35 Aligned_cols=163 Identities=16% Similarity=0.205 Sum_probs=116.8
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCC-Chh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPG-SFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~-~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
.+.++.++++|++|.++++++++.+.+++|++|+||||||+... .++. +.+ ++|++.+++|+.+++.+++.+.+.|+
T Consensus 81 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 160 (279)
T 3ctm_A 81 YGVHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFK 160 (279)
T ss_dssp HCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred cCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 36678899999999999999999999999999999999999765 4554 555 78888887777777777777777664
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 161 ~------------------------------------------------------------------------------- 161 (279)
T 3ctm_A 161 K------------------------------------------------------------------------------- 161 (279)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
.+.++||++||..+.... ...+...|++||
T Consensus 162 ------------~~~~~iv~isS~~~~~~~--------------------------------------~~~~~~~Y~~sK 191 (279)
T 3ctm_A 162 ------------NGKGSLIITSSISGKIVN--------------------------------------IPQLQAPYNTAK 191 (279)
T ss_dssp ------------HTCCEEEEECCCTTSCC-----------------------------------------CCHHHHHHHH
T ss_pred ------------cCCCeEEEECchHhccCC--------------------------------------CCCCcccHHHHH
Confidence 112566666666554310 011234599999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
+++..+++.++.++... | +||+|+||+|+|++.... .++.........|++|++.
T Consensus 192 ~a~~~~~~~la~e~~~~----~-~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~p~~~~~~ 246 (279)
T 3ctm_A 192 AACTHLAKSLAIEWAPF----A-RVNTISPGYIDTDITDFA---SKDMKAKWWQLTPLGREGL 246 (279)
T ss_dssp HHHHHHHHHHHHHTTTT----C-EEEEEEECSBSSTTTSSC---CHHHHHHHHHHSTTCSCBC
T ss_pred HHHHHHHHHHHHHhccc----C-CEEEEeccCCcccccccc---ChHHHHHHHHhCCccCCcC
Confidence 99999999988888755 8 999999999999997531 2222222233445665543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-21 Score=174.92 Aligned_cols=155 Identities=18% Similarity=0.190 Sum_probs=109.7
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.+.++.++.+|++|.++++++++.+.+. .|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|+
T Consensus 43 ~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~---~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 119 (230)
T 3guy_A 43 NCLSNNVGYRARDLASHQEVEQLFEQLDSI---PSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYK 119 (230)
T ss_dssp HTCSSCCCEEECCTTCHHHHHHHHHSCSSC---CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhccCeEeecCCCHHHHHHHHHHHhhc---CCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677889999999999999988876543 39999999998766666665 88888888888888777777777665
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+.
T Consensus 120 ~~------------------------------------------------------------------------------ 121 (230)
T 3guy_A 120 DQ------------------------------------------------------------------------------ 121 (230)
T ss_dssp TS------------------------------------------------------------------------------
T ss_pred hC------------------------------------------------------------------------------
Confidence 41
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
+++||++||..+... ..+...|++||
T Consensus 122 --------------~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK 147 (230)
T 3guy_A 122 --------------PVNVVMIMSTAAQQP----------------------------------------KAQESTYCAVK 147 (230)
T ss_dssp --------------CCEEEEECCGGGTSC----------------------------------------CTTCHHHHHHH
T ss_pred --------------CCeEEEEeecccCCC----------------------------------------CCCCchhHHHH
Confidence 235566666555431 22335699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccC-------CCCcchhhhhhhh
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG-------VLTPEQGKIRQKI 298 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~ 298 (313)
+|+..|++.++.++++. ||+||+|+||+|+|++.+... ..++++.+....+
T Consensus 148 aa~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~dvA~~i~~ 205 (230)
T 3guy_A 148 WAVKGLIESVRLELKGK----PMKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDAALMIHG 205 (230)
T ss_dssp HHHHHHHHHHHHHTTTS----SCEEEEEEECCC----------------CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc----CeEEEEEECCcccChHHHhcCCCCCcccCCCHHHHHHHHHH
Confidence 99999999999988765 999999999999999976532 2445555555444
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-21 Score=176.13 Aligned_cols=140 Identities=22% Similarity=0.289 Sum_probs=108.8
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCC-cEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGL-DLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~i-DilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
.++.++++|++|.++++++++.+.+++|++ |+||||||+....++.+.+ ++|++.+++|+.+++.+++++.+.|++.
T Consensus 63 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~- 141 (264)
T 2pd6_A 63 GNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSN- 141 (264)
T ss_dssp -CCEEEECCTTSHHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-
T ss_pred cceEEEEecCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-
Confidence 567889999999999999999999999999 9999999998765555554 7788888777777777777766665430
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 142 -------------------------------------------------------------------------------- 141 (264)
T 2pd6_A 142 -------------------------------------------------------------------------------- 141 (264)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccC-CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 167 VCHILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 167 ~~~~~~p~l~~-~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+ .|+||++||..+... ..+...|++||++
T Consensus 142 ----------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a 171 (264)
T 2pd6_A 142 ----------GCRGSIINISSIVGKVG----------------------------------------NVGQTNYAASKAG 171 (264)
T ss_dssp ----------TCCEEEEEECCTHHHHC----------------------------------------CTTBHHHHHHHHH
T ss_pred ----------CCCceEEEECChhhccC----------------------------------------CCCChhhHHHHHH
Confidence 1 256667766655431 2233469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.++.++.+. ||++++|+||+|.|++...
T Consensus 172 ~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 205 (264)
T 2pd6_A 172 VIGLTQTAARELGRH----GIRCNSVLPGFIATPMTQK 205 (264)
T ss_dssp HHHHHHHHHHHHGGG----TEEEEEEEECSBCSCC---
T ss_pred HHHHHHHHHHHhhhc----CeEEEEEeeecccccchhh
Confidence 999999999998766 9999999999999998654
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=174.06 Aligned_cols=142 Identities=28% Similarity=0.380 Sum_probs=110.7
Q ss_pred CCCceeE-EEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 7 NNNNVRF-HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 7 ~g~~~~~-~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++.. +.+|++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 49 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~ 128 (245)
T 2ph3_A 49 RGSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMK 128 (245)
T ss_dssp TTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHh
Confidence 3556667 89999999999999999999999999999999997655555544 777777777777777777666665543
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 129 ~------------------------------------------------------------------------------- 129 (245)
T 2ph3_A 129 A------------------------------------------------------------------------------- 129 (245)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+.++||++||..+... ..+...|++||+
T Consensus 130 ------------~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~ 157 (245)
T 2ph3_A 130 ------------RFGRIVNITSVVGILG----------------------------------------NPGQANYVASKA 157 (245)
T ss_dssp ------------TCEEEEEECCTHHHHC----------------------------------------CSSBHHHHHHHH
T ss_pred ------------CCCEEEEEeChhhccC----------------------------------------CCCCcchHHHHH
Confidence 1256777777665431 123346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.++.++.+. ||++++|+||++.|++.+.
T Consensus 158 a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 192 (245)
T 2ph3_A 158 GLIGFTRAVAKEYAQR----GITVNAVAPGFIETEMTER 192 (245)
T ss_dssp HHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHT
T ss_pred HHHHHHHHHHHHHHHc----CeEEEEEEEEeecCcchhh
Confidence 9999999999998766 9999999999999998654
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.9e-21 Score=172.57 Aligned_cols=143 Identities=20% Similarity=0.197 Sum_probs=111.6
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
+.+.++.++.||++|.++++++++.+.+++|++|+||||||+....+++...++|++.+++|+.+++.+++++.|.|++.
T Consensus 57 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 136 (255)
T 1fmc_A 57 QLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN 136 (255)
T ss_dssp HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred HhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 34667889999999999999999999999999999999999977655532337788888777777777777777666431
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 137 -------------------------------------------------------------------------------- 136 (255)
T 1fmc_A 137 -------------------------------------------------------------------------------- 136 (255)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+.++||++||..+... ..+...|++||++
T Consensus 137 -----------~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~a 165 (255)
T 1fmc_A 137 -----------GGGVILTITSMAAENK----------------------------------------NINMTSYASSKAA 165 (255)
T ss_dssp -----------TCEEEEEECCGGGTCC----------------------------------------CTTCHHHHHHHHH
T ss_pred -----------CCcEEEEEcchhhcCC----------------------------------------CCCCcccHHHHHH
Confidence 1255666666555431 1233469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.++.++... ||++|+|+||++.|++.+.
T Consensus 166 ~~~~~~~~~~~~~~~----~i~v~~v~Pg~v~t~~~~~ 199 (255)
T 1fmc_A 166 ASHLVRNMAFDLGEK----NIRVNGIAPGAILTDALKS 199 (255)
T ss_dssp HHHHHHHHHHHHHTT----TEEEEEEEECSBCSHHHHT
T ss_pred HHHHHHHHHHHhhhc----CcEEEEEecccCcchhhhh
Confidence 999999999888765 9999999999999998654
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-21 Score=190.33 Aligned_cols=147 Identities=13% Similarity=-0.015 Sum_probs=107.8
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-------------CCCC-----------------
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR-------------DTAP----------------- 53 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~-------------~~~~----------------- 53 (313)
+++.|.++..++||++|+++++++++.+.+++|+||+||||||+.. ..++
T Consensus 118 ~~~~g~~~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~ 197 (418)
T 4eue_A 118 AKKKGLVAKNFIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEIT 197 (418)
T ss_dssp HHHTTCCEEEEESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEE
T ss_pred HHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccc
Confidence 3456788999999999999999999999999999999999999851 1222
Q ss_pred ----CChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHH
Q psy2266 54 ----GSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYV 128 (313)
Q Consensus 54 ----~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 128 (313)
.+++ ++|++++++|..+.+.
T Consensus 198 ~~~~~~~t~e~~~~~~~vn~~~~~~------------------------------------------------------- 222 (418)
T 4eue_A 198 LKKVSSASIEEIEETRKVMGGEDWQ------------------------------------------------------- 222 (418)
T ss_dssp EEEECBCCHHHHHHHHHHHSSHHHH-------------------------------------------------------
T ss_pred cccccCCCHHHHHHHHHHhhHHHHH-------------------------------------------------------
Confidence 1222 5555555555444440
Q ss_pred HHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhh-cc-cCCCceEEecCCccccccccChhhhhhhhcc
Q psy2266 129 QYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFP-LL-RPHARVVNVASKLGMLYNVPSQELRQTLFNE 206 (313)
Q Consensus 129 ~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p-~l-~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~ 206 (313)
.+++.+++ .| .++|+||++||..+....
T Consensus 223 -------------------------------------~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~------------- 252 (418)
T 4eue_A 223 -------------------------------------EWCEELLYEDCFSDKATTIAYSYIGSPRTY------------- 252 (418)
T ss_dssp -------------------------------------HHHHHHHHTTCEEEEEEEEEEECCCCGGGT-------------
T ss_pred -------------------------------------HHHHHHHHHhhhcCCcEEEEEeCchhcCCC-------------
Confidence 33344333 22 335788888887775521
Q ss_pred ccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhcc-CCCCCCeEEEeeccccccccccccc
Q psy2266 207 SLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSK-DKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~-~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
+.....+|++||+|+..++|.|+.+|++ . |||||+|+||+|+|+++...
T Consensus 253 -------------------------p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~----GIrVN~V~PG~v~T~~s~~i 302 (418)
T 4eue_A 253 -------------------------KIYREGTIGIAKKDLEDKAKLINEKLNRVI----GGRAFVSVNKALVTKASAYI 302 (418)
T ss_dssp -------------------------TTTTTSHHHHHHHHHHHHHHHHHHHHHHHH----SCEEEEEECCCCCCHHHHTS
T ss_pred -------------------------CccccHHHHHHHHHHHHHHHHHHHHhCCcc----CeEEEEEECCcCcChhhhcC
Confidence 1112256999999999999999999997 7 99999999999999998764
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=7.6e-22 Score=178.76 Aligned_cols=128 Identities=13% Similarity=0.164 Sum_probs=99.9
Q ss_pred CHHHHHHHHHHHHHHcCCCcEEEECCCCC-CCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEeccccc
Q psy2266 20 DQSSIHKLHDDIQTQHGGLDLLVNNAGIY-RDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM 97 (313)
Q Consensus 20 ~~~~v~~~~~~v~~~~g~iDilVnNAGi~-~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS~~~~ 97 (313)
|.++++++++.+.+++|++|+||||||+. ...++.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 55 d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~------------- 121 (254)
T 1zmt_A 55 SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKK------------- 121 (254)
T ss_dssp CCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-------------
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-------------
Confidence 67788999999999999999999999997 555555555 778888877777777777776666543
Q ss_pred ccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 98 LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 98 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
++
T Consensus 122 ------------------------------------------------------------------------------~~ 123 (254)
T 1zmt_A 122 ------------------------------------------------------------------------------RK 123 (254)
T ss_dssp ------------------------------------------------------------------------------HT
T ss_pred ------------------------------------------------------------------------------cC
Confidence 11
Q ss_pred CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhh
Q psy2266 178 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATL 257 (313)
Q Consensus 178 ~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l 257 (313)
.|+||++||..+... ..+..+|++||+|+..|++.++.++
T Consensus 124 ~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~ 163 (254)
T 1zmt_A 124 SGHIIFITSATPFGP----------------------------------------WKELSTYTSARAGACTLANALSKEL 163 (254)
T ss_dssp CCEEEEECCSTTTSC----------------------------------------CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCcccccC----------------------------------------CCCchHHHHHHHHHHHHHHHHHHHh
Confidence 366777777766541 2233469999999999999999999
Q ss_pred ccCCCCCCeEEEeeccccc---------cccccc
Q psy2266 258 SKDKRRPDIIVNPVHPGYV---------NTDLTE 282 (313)
Q Consensus 258 ~~~~~~~gI~vn~v~PG~v---------~T~~~~ 282 (313)
+++ ||+||+|+||+| +|++.+
T Consensus 164 ~~~----gi~v~~v~PG~v~~~~~~~~~~T~~~~ 193 (254)
T 1zmt_A 164 GEY----NIPVFAIGPNYLHSEDSPYFYPTEPWK 193 (254)
T ss_dssp GGG----TCCEEEEEESSBCCBTCCSSCBHHHHT
T ss_pred hhc----CcEEEEEecCccccccccccCCCcccc
Confidence 876 999999999999 888754
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.1e-21 Score=169.85 Aligned_cols=155 Identities=22% Similarity=0.177 Sum_probs=109.7
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.++.+|++|.++++++++.+.+.+|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.+.|++.
T Consensus 51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--- 127 (234)
T 2ehd_A 51 GALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR--- 127 (234)
T ss_dssp TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT---
T ss_pred hceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---
Confidence 578889999999999999999999999999999999997655555554 7788888777777777777777666441
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 128 -------------------------------------------------------------------------------- 127 (234)
T 2ehd_A 128 -------------------------------------------------------------------------------- 127 (234)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
+.++||++||..+... ..+...|++||+++..
T Consensus 128 --------~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~~ 159 (234)
T 2ehd_A 128 --------GGGTIVNVGSLAGKNP----------------------------------------FKGGAAYNASKFGLLG 159 (234)
T ss_dssp --------TCEEEEEECCTTTTSC----------------------------------------CTTCHHHHHHHHHHHH
T ss_pred --------CCcEEEEECCchhcCC----------------------------------------CCCCchhhHHHHHHHH
Confidence 1256667766665431 1233469999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccccC----CCCcchhhhhhhhh
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG----VLTPEQGKIRQKIY 299 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~~~~~ 299 (313)
+++.++.++.+. ||++|+|+||+|+|++..... ...+++.+....++
T Consensus 160 ~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~dvA~~~~~l 210 (234)
T 2ehd_A 160 LAGAAMLDLREA----NVRVVNVLPGSVDTGFAGNTPGQAWKLKPEDVAQAVLFA 210 (234)
T ss_dssp HHHHHHHHHGGG----TEEEEEEECC----------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhc----CcEEEEEEeCCCcCCcccccccccCCCCHHHHHHHHHHH
Confidence 999999998866 999999999999999865421 23555555554443
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-21 Score=173.61 Aligned_cols=83 Identities=7% Similarity=0.020 Sum_probs=67.1
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHc--CCCcEEEECCCCCCCCCC-CChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQH--GGLDLLVNNAGIYRDTAP-GSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~--g~iDilVnNAGi~~~~~~-~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
...+.||++|.++++++++.+.+++ |++|+||||||+....++ .+.+ ++|++.+++|+.+++.+++++.|.|++++
T Consensus 44 ~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g 123 (236)
T 1ooe_A 44 NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGG 123 (236)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred cEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCC
Confidence 4567899999999999999999999 799999999999876665 5555 99999998888888888888777765444
Q ss_pred eEEEEec
Q psy2266 87 RVVNVAS 93 (313)
Q Consensus 87 ~IV~isS 93 (313)
+||++||
T Consensus 124 ~iv~isS 130 (236)
T 1ooe_A 124 LLQLTGA 130 (236)
T ss_dssp EEEEECC
T ss_pred EEEEECc
Confidence 4444444
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.9e-21 Score=170.66 Aligned_cols=146 Identities=14% Similarity=0.134 Sum_probs=114.9
Q ss_pred ccCCCHHHHHHHHHHHHHHcCCccEEEeccCcC-CCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecC
Q psy2266 112 NESLTEDQLLDMMTDYVQYNGPLDKILDTAMDT-APGSF----GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVAS 186 (313)
Q Consensus 112 ~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~-~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss 186 (313)
+|..++++++++++. +|++|+|+||||.. ..+++ .++|+.++++|+.|++.++++++|.|+++|+||++||
T Consensus 42 ~D~~~~~~v~~~~~~----~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS 117 (223)
T 3uce_A 42 LDISDEKSVYHYFET----IGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSG 117 (223)
T ss_dssp CCTTCHHHHHHHHHH----HCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred cCCCCHHHHHHHHHH----hCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecc
Confidence 677888888877764 59999999999987 44554 3789999999999999999999999998999999999
Q ss_pred CccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCe
Q psy2266 187 KLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDI 266 (313)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI 266 (313)
..+... ..+..+|++||+|+..+++.++.++.+ |
T Consensus 118 ~~~~~~----------------------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~------i 151 (223)
T 3uce_A 118 MLSRKV----------------------------------------VANTYVKAAINAAIEATTKVLAKELAP------I 151 (223)
T ss_dssp GGGTSC----------------------------------------CTTCHHHHHHHHHHHHHHHHHHHHHTT------S
T ss_pred hhhccC----------------------------------------CCCchHHHHHHHHHHHHHHHHHHhhcC------c
Confidence 988652 233456999999999999999888762 9
Q ss_pred EEEeecccccccccccccCCCCcc-hhhhhhhhhhcccCCcc
Q psy2266 267 IVNPVHPGYVNTDLTEHKGVLTPE-QGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 267 ~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~l~r~~~~ 307 (313)
+||+|+||+|+|++.+.......+ ..+......|++|+++.
T Consensus 152 ~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (223)
T 3uce_A 152 RVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEA 193 (223)
T ss_dssp EEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCH
T ss_pred EEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCH
Confidence 999999999999997764211111 11223445677776653
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5e-21 Score=171.22 Aligned_cols=142 Identities=27% Similarity=0.382 Sum_probs=110.9
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.++.+|++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 55 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~- 133 (248)
T 2pnf_A 55 YGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIK- 133 (248)
T ss_dssp HCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHH-
T ss_pred cCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh-
Confidence 356788899999999999999999999999999999999997765555544 777777777777777766666665533
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 134 -------------------------------------------------------------------------------- 133 (248)
T 2pnf_A 134 -------------------------------------------------------------------------------- 133 (248)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
.+.++||++||..+... ..+...|++||++
T Consensus 134 ----------~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~a 163 (248)
T 2pnf_A 134 ----------QRWGRIVNISSVVGFTG----------------------------------------NVGQVNYSTTKAG 163 (248)
T ss_dssp ----------HTCEEEEEECCHHHHHC----------------------------------------CTTCHHHHHHHHH
T ss_pred ----------cCCcEEEEEccHHhcCC----------------------------------------CCCCchHHHHHHH
Confidence 11256666666654431 1233469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.++.++... ||++|+|+||++.|++...
T Consensus 164 ~~~~~~~la~e~~~~----~i~v~~v~Pg~v~t~~~~~ 197 (248)
T 2pnf_A 164 LIGFTKSLAKELAPR----NVLVNAVAPGFIETDMTAV 197 (248)
T ss_dssp HHHHHHHHHHHHGGG----TEEEEEEEECSBCCGGGGG
T ss_pred HHHHHHHHHHHhccc----CeEEEEEEeceecCchhhh
Confidence 999999999998766 9999999999999998754
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=7e-21 Score=171.01 Aligned_cols=148 Identities=21% Similarity=0.272 Sum_probs=113.4
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCC-CCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI-YRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi-~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++.++.||++|.++++++++.+.+++|++|+||||||+ ....++.+.+ ++|++++++|+.+++.+++++.|.|++
T Consensus 55 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 134 (258)
T 3afn_B 55 DGGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAA 134 (258)
T ss_dssp TTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 36678899999999999999999999999999999999998 5444555554 778888888888888877777776643
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.+.
T Consensus 135 ~~~----------------------------------------------------------------------------- 137 (258)
T 3afn_B 135 AAK----------------------------------------------------------------------------- 137 (258)
T ss_dssp HHH-----------------------------------------------------------------------------
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 100
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+ -.+.++||++||..+.... ..+...|++||+
T Consensus 138 --------~-~~~~~~iv~~sS~~~~~~~---------------------------------------~~~~~~Y~~sK~ 169 (258)
T 3afn_B 138 --------A-SGQTSAVISTGSIAGHTGG---------------------------------------GPGAGLYGAAKA 169 (258)
T ss_dssp --------H-HTSCEEEEEECCTHHHHCC---------------------------------------CTTCHHHHHHHH
T ss_pred --------C-CCCCcEEEEecchhhccCC---------------------------------------CCCchHHHHHHH
Confidence 0 0011667777776654300 123346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++..+++.++.++++. ||++|+|+||+|.|++...
T Consensus 170 a~~~~~~~~~~e~~~~----gi~v~~v~Pg~v~t~~~~~ 204 (258)
T 3afn_B 170 FLHNVHKNWVDFHTKD----GVRFNIVSPGTVDTAFHAD 204 (258)
T ss_dssp HHHHHHHHHHHHHGGG----TEEEEEEEECSBSSGGGTT
T ss_pred HHHHHHHHHHHhhccc----CeEEEEEeCCCcccccccc
Confidence 9999999999998766 9999999999999998654
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-20 Score=171.02 Aligned_cols=170 Identities=24% Similarity=0.311 Sum_probs=126.0
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcC--CCcEEEECCCCCC-CCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHG--GLDLLVNNAGIYR-DTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g--~iDilVnNAGi~~-~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
+.++.++.||++|.++++++++.+.+++| ++|+||||||+.. ..++.+.+ ++|++.+++|+.+++.+++++.+.|+
T Consensus 71 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 150 (267)
T 1sny_A 71 HSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLK 150 (267)
T ss_dssp CTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHh
Confidence 55788999999999999999999999999 8999999999987 45555554 88888888888888888888887764
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+...- |-
T Consensus 151 ~~~~~-----------------------------------------------------------------------~~-- 157 (267)
T 1sny_A 151 KAAKA-----------------------------------------------------------------------NE-- 157 (267)
T ss_dssp HHHHH-----------------------------------------------------------------------TT--
T ss_pred hcccc-----------------------------------------------------------------------cc--
Confidence 31000 00
Q ss_pred HHHHHHHHhhccc-CCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 164 LVTVCHILFPLLR-PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 164 ~~~~~~~~~p~l~-~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
.+... +.++||++||..+..... ...+...|++|
T Consensus 158 --------~~~~~~~~~~iv~isS~~~~~~~~-------------------------------------~~~~~~~Y~~s 192 (267)
T 1sny_A 158 --------SQPMGVGRAAIINMSSILGSIQGN-------------------------------------TDGGMYAYRTS 192 (267)
T ss_dssp --------TSCSSTTTCEEEEECCGGGCSTTC-------------------------------------CSCCCHHHHHH
T ss_pred --------cccccCCCceEEEEecccccccCC-------------------------------------CCCCchHHHHH
Confidence 00000 036788888877654210 01133469999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhh
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIY 299 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~ 299 (313)
|+++..+++.++.++.+. ||++++|+||+|+|+|.......++++.+......
T Consensus 193 K~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~~~~~~~~~~a~~~~~~ 245 (267)
T 1sny_A 193 KSALNAATKSLSVDLYPQ----RIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQT 245 (267)
T ss_dssp HHHHHHHHHHHHHHHGGG----TCEEEEECCCSBCSTTTCTTCSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcC----CcEEEEeCCcceecCCCCCCCCCCHHHHHHHHHHH
Confidence 999999999999998866 99999999999999998765556677766655444
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.5e-21 Score=172.96 Aligned_cols=82 Identities=15% Similarity=0.157 Sum_probs=66.3
Q ss_pred eEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC-CCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA-PGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 12 ~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~-~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
..+.+|++|.++++++++.+.+++|++|+||||||+..... ..+.+ ++|++++++|+.+++.+++++.+.|+++|+||
T Consensus 62 ~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv 141 (251)
T 3orf_A 62 HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFV 141 (251)
T ss_dssp EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEE
Confidence 35789999999999999999999999999999999987653 55555 99999998888888888887777665544444
Q ss_pred EEec
Q psy2266 90 NVAS 93 (313)
Q Consensus 90 ~isS 93 (313)
++||
T Consensus 142 ~isS 145 (251)
T 3orf_A 142 LTGA 145 (251)
T ss_dssp EECC
T ss_pred EEec
Confidence 4444
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=5.7e-21 Score=174.63 Aligned_cols=161 Identities=20% Similarity=0.246 Sum_probs=119.2
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.++.||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 77 ~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 156 (272)
T 1yb1_A 77 GLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTK 156 (272)
T ss_dssp HTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 3466789999999999999999999999999999999999998766666665 788888877777777777777766643
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.
T Consensus 157 ~------------------------------------------------------------------------------- 157 (272)
T 1yb1_A 157 N------------------------------------------------------------------------------- 157 (272)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+.++||++||..+.... .+...|++||+
T Consensus 158 ------------~~~~iv~isS~~~~~~~----------------------------------------~~~~~Y~~sK~ 185 (272)
T 1yb1_A 158 ------------NHGHIVTVASAAGHVSV----------------------------------------PFLLAYCSSKF 185 (272)
T ss_dssp ------------TCEEEEEECCCC-CCCH----------------------------------------HHHHHHHHHHH
T ss_pred ------------CCCEEEEEechhhcCCC----------------------------------------CCchhHHHHHH
Confidence 12566666666654310 11235999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc-----cCCCCcchhhhhhhh
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH-----KGVLTPEQGKIRQKI 298 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~-----~~~~~~~~~~~~~~~ 298 (313)
++..+++.++.++... .+.||+||+|+||+|+|++.+. .....+++.+.....
T Consensus 186 a~~~l~~~la~e~~~~-~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~dva~~i~~ 243 (272)
T 1yb1_A 186 AAVGFHKTLTDELAAL-QITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMH 243 (272)
T ss_dssp HHHHHHHHHHHHHHHT-TCTTEEEEEEEETHHHHCSTTCTHHHHCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-CCCCeEEEEEeCCcccCCccccccccccCCCCHHHHHHHHHH
Confidence 9999999999998621 2349999999999999998542 123455555544433
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6.3e-21 Score=171.35 Aligned_cols=142 Identities=23% Similarity=0.230 Sum_probs=109.4
Q ss_pred CCce-eEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 8 NNNV-RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 8 g~~~-~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
+.++ .++.+|++|.++++++++.+.+ ++++|+||||||+.....+.+.+ ++|++.+++|+.+++.+++++.|.|++
T Consensus 56 ~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~- 133 (254)
T 2wsb_A 56 GAAVAARIVADVTDAEAMTAAAAEAEA-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVA- 133 (254)
T ss_dssp GGGEEEEEECCTTCHHHHHHHHHHHHH-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-
T ss_pred cccceeEEEEecCCHHHHHHHHHHHHh-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-
Confidence 4455 7889999999999999999988 99999999999998766555554 778888877777777777777666643
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 134 -------------------------------------------------------------------------------- 133 (254)
T 2wsb_A 134 -------------------------------------------------------------------------------- 133 (254)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
.+.++||++||..+.... ...+...|++||++
T Consensus 134 ----------~~~~~iv~isS~~~~~~~--------------------------------------~~~~~~~Y~~sK~a 165 (254)
T 2wsb_A 134 ----------RGAGAIVNLGSMSGTIVN--------------------------------------RPQFASSYMASKGA 165 (254)
T ss_dssp ----------HTCEEEEEECCGGGTSCC--------------------------------------SSSCBHHHHHHHHH
T ss_pred ----------cCCcEEEEEecchhccCC--------------------------------------CCCcchHHHHHHHH
Confidence 112566666666554311 01122469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+..+++.++.++.+. ||++++|+||+|.|++.+.
T Consensus 166 ~~~~~~~~~~~~~~~----gi~v~~v~Pg~v~t~~~~~ 199 (254)
T 2wsb_A 166 VHQLTRALAAEWAGR----GVRVNALAPGYVATEMTLK 199 (254)
T ss_dssp HHHHHHHHHHHHGGG----TEEEEEEEECCBCSHHHHH
T ss_pred HHHHHHHHHHHHhhc----CeEEEEEEecccCchhhhc
Confidence 999999999998766 9999999999999998654
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-20 Score=168.16 Aligned_cols=140 Identities=21% Similarity=0.257 Sum_probs=109.8
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD--TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~--~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
++.++.||++|.++++++++.+.+++|++|+||||||+... .++.+.+ ++|++.+++|+.+++.+++++.+.|++.
T Consensus 65 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~- 143 (278)
T 2bgk_A 65 VISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA- 143 (278)
T ss_dssp TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-
T ss_pred ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-
Confidence 68899999999999999999999999999999999998753 3444444 7788888777777777777766666431
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 144 -------------------------------------------------------------------------------- 143 (278)
T 2bgk_A 144 -------------------------------------------------------------------------------- 143 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+.|+||++||..+.... ..+...|++||+++
T Consensus 144 ----------~~~~iv~isS~~~~~~~---------------------------------------~~~~~~Y~~sK~a~ 174 (278)
T 2bgk_A 144 ----------KKGSIVFTASISSFTAG---------------------------------------EGVSHVYTATKHAV 174 (278)
T ss_dssp ----------TCEEEEEECCGGGTCCC---------------------------------------TTSCHHHHHHHHHH
T ss_pred ----------CCCeEEEEeeccccCCC---------------------------------------CCCCcchHHHHHHH
Confidence 12566677666654311 00234699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+++.++.++++. ||++++|+||+|.|++...
T Consensus 175 ~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 207 (278)
T 2bgk_A 175 LGLTTSLCTELGEY----GIRVNCVSPYIVASPLLTD 207 (278)
T ss_dssp HHHHHHHHHHHGGG----TEEEEEEEESCCSCCCCTT
T ss_pred HHHHHHHHHHHhhc----CcEEEEEEeceecchhhhh
Confidence 99999999998766 9999999999999998665
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6.8e-21 Score=179.09 Aligned_cols=133 Identities=22% Similarity=0.273 Sum_probs=104.6
Q ss_pred EeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEec
Q psy2266 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNVAS 93 (313)
Q Consensus 15 ~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS 93 (313)
.+|+++.++++++++.+.+++|+||+||||||+....++.+++ ++|+.++++|+.+++.++++++|.|++
T Consensus 70 ~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--------- 140 (319)
T 1gz6_A 70 VANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKK--------- 140 (319)
T ss_dssp EEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred EEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH---------
Confidence 5899999999999999999999999999999998765555554 778888877777777777776666643
Q ss_pred ccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhh
Q psy2266 94 KLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
T Consensus 141 -------------------------------------------------------------------------------- 140 (319)
T 1gz6_A 141 -------------------------------------------------------------------------------- 140 (319)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHH
Q psy2266 174 LLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQ 253 (313)
Q Consensus 174 ~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~ 253 (313)
.+.|+||++||..+... ..+..+|++||+|+..|++.+
T Consensus 141 --~~~grIV~vsS~~~~~~----------------------------------------~~~~~~Y~aSK~a~~~~~~~l 178 (319)
T 1gz6_A 141 --QNYGRIIMTASASGIYG----------------------------------------NFGQANYSAAKLGLLGLANTL 178 (319)
T ss_dssp --HTCEEEEEECCHHHHHC----------------------------------------CTTCHHHHHHHHHHHHHHHHH
T ss_pred --cCCCEEEEECChhhccC----------------------------------------CCCCHHHHHHHHHHHHHHHHH
Confidence 11256666666655431 223356999999999999999
Q ss_pred HhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 254 HATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 254 ~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
++++++. ||+||+|+||++ |++.+.
T Consensus 179 a~el~~~----gI~vn~v~PG~~-t~~~~~ 203 (319)
T 1gz6_A 179 VIEGRKN----NIHCNTIAPNAG-SRMTET 203 (319)
T ss_dssp HHHTGGG----TEEEEEEEEECC-STTTGG
T ss_pred HHHhccc----CEEEEEEeCCCc-cccccc
Confidence 9998766 999999999998 888654
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.7e-20 Score=171.98 Aligned_cols=75 Identities=19% Similarity=0.264 Sum_probs=62.0
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
.+.++.+++||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.+.
T Consensus 70 ~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 145 (303)
T 1yxm_A 70 KQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSS 145 (303)
T ss_dssp CCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCccEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 466789999999999999999999999999999999999987655555544 778888877777777777776663
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.1e-20 Score=171.33 Aligned_cols=141 Identities=16% Similarity=0.100 Sum_probs=109.2
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.+++||++|.++++++++.+.+++|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.+.|++.
T Consensus 75 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~- 153 (302)
T 1w6u_A 75 GNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKA- 153 (302)
T ss_dssp SSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred CCceEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-
Confidence 66789999999999999999999999999999999999987655555554 7888888888888877777777766410
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 154 -------------------------------------------------------------------------------- 153 (302)
T 1w6u_A 154 -------------------------------------------------------------------------------- 153 (302)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
.+.++||++||..+... ..+...|++||+++
T Consensus 154 ---------~~~~~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 184 (302)
T 1w6u_A 154 ---------QKGAAFLSITTIYAETG----------------------------------------SGFVVPSASAKAGV 184 (302)
T ss_dssp ---------TCCEEEEEECCTHHHHC----------------------------------------CTTCHHHHHHHHHH
T ss_pred ---------cCCCEEEEEcccccccC----------------------------------------CCCcchhHHHHHHH
Confidence 01256666666655431 22334699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccc-ccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD-LTE 282 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~-~~~ 282 (313)
..+++.++.+++.. ||++++|+||+|.|+ +..
T Consensus 185 ~~~~~~la~~~~~~----gi~v~~v~Pg~v~t~~~~~ 217 (302)
T 1w6u_A 185 EAMSKSLAAEWGKY----GMRFNVIQPGPIKTKGAFS 217 (302)
T ss_dssp HHHHHHHHHHHGGG----TEEEEEEEECCBCC-----
T ss_pred HHHHHHHHHHhhhc----CcEEEEEeeccCCCcchhh
Confidence 99999999998766 999999999999998 443
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.7e-21 Score=176.85 Aligned_cols=151 Identities=26% Similarity=0.363 Sum_probs=102.8
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
++.+.++.++++|++|.++++++++.+ +++|+||||||+.... .+.+
T Consensus 58 ~~~~~~~~~~~~Dl~d~~~v~~~~~~~----~~iD~lv~nAg~~~~~--~~~~--------------------------- 104 (291)
T 3rd5_A 58 RTMAGQVEVRELDLQDLSSVRRFADGV----SGADVLINNAGIMAVP--YALT--------------------------- 104 (291)
T ss_dssp TTSSSEEEEEECCTTCHHHHHHHHHTC----CCEEEEEECCCCCSCC--CCBC---------------------------
T ss_pred HHhcCCeeEEEcCCCCHHHHHHHHHhc----CCCCEEEECCcCCCCc--ccCC---------------------------
Confidence 345678899999999999998888765 8999999999986532 2222
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
.++|+.++++|+.|+
T Consensus 105 -----------------------------------------------------------------~~~~~~~~~vN~~g~ 119 (291)
T 3rd5_A 105 -----------------------------------------------------------------VDGFESQIGTNHLGH 119 (291)
T ss_dssp -----------------------------------------------------------------TTSCBHHHHHHTHHH
T ss_pred -----------------------------------------------------------------HHHHHHHHHHHHHHH
Confidence 144556666666666
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+.++++++|.|++ +||++||.++....+...+. . .......+..+|++||+
T Consensus 120 ~~l~~~~~~~~~~--riv~isS~~~~~~~~~~~~~---------~------------------~~~~~~~~~~~Y~~sK~ 170 (291)
T 3rd5_A 120 FALTNLLLPRLTD--RVVTVSSMAHWPGRINLEDL---------N------------------WRSRRYSPWLAYSQSKL 170 (291)
T ss_dssp HHHHHHHGGGEEE--EEEEECCGGGTTCCCCSSCT---------T------------------CSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh--heeEeechhhccCCCCcccc---------c------------------ccccCCCCcchHHHHHH
Confidence 6666666776653 67788777765422111000 0 00011223346999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
|+..+++.++++++++ ..+|+||+|+||+|+|++.+..
T Consensus 171 a~~~~~~~la~e~~~~--g~~i~v~~v~PG~v~T~~~~~~ 208 (291)
T 3rd5_A 171 ANLLFTSELQRRLTAA--GSPLRALAAHPGYSHTNLQGAS 208 (291)
T ss_dssp HHHHHHHHHHHHHHHT--TCCCEEEEECCSGGGSCC----
T ss_pred HHHHHHHHHHHHHhhC--CCCEEEEEeeCCCCcccccccc
Confidence 9999999999999876 1239999999999999998763
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-20 Score=168.34 Aligned_cols=88 Identities=19% Similarity=0.161 Sum_probs=71.5
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.+.++.++.+|++|.++++++++.+.+++|++|+||||||+.....+.+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 68 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 147 (274)
T 1ja9_A 68 KLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR 147 (274)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE
T ss_pred hcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3467788999999999999999999999999999999999998766555555 899999988888888888877776654
Q ss_pred CceEEEEec
Q psy2266 85 HARVVNVAS 93 (313)
Q Consensus 85 ~g~IV~isS 93 (313)
+++||++||
T Consensus 148 ~~~iv~~sS 156 (274)
T 1ja9_A 148 GGRIILTSS 156 (274)
T ss_dssp EEEEEEECC
T ss_pred CCEEEEEcC
Confidence 344444444
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-20 Score=170.81 Aligned_cols=137 Identities=25% Similarity=0.324 Sum_probs=102.3
Q ss_pred CCceeEEEeecCCH-HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQ-SSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~-~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.++.||++|. ++++++++.+.+++|++|+||||||+.. .++|++.+++|+.+++.+++++.|.|++.+
T Consensus 54 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-------~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 126 (254)
T 1sby_A 54 KVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILD-------DHQIERTIAINFTGLVNTTTAILDFWDKRK 126 (254)
T ss_dssp TSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-------TTCHHHHHHHHTHHHHHHHHHHHHHHCGGG
T ss_pred CceEEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECCccCC-------HHHHhhhheeeehhHHHHHHHHHHHHHHhc
Confidence 44677888999988 8899999999888899999999998742 134556665666555555555555443210
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
.
T Consensus 127 ~------------------------------------------------------------------------------- 127 (254)
T 1sby_A 127 G------------------------------------------------------------------------------- 127 (254)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
.++|+||++||.++... ..+...|++||+++
T Consensus 128 ---------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~ 158 (254)
T 1sby_A 128 ---------GPGGIIANICSVTGFNA----------------------------------------IHQVPVYSASKAAV 158 (254)
T ss_dssp ---------CCCEEEEEECCGGGTSC----------------------------------------CTTSHHHHHHHHHH
T ss_pred ---------CCCCEEEEECchhhccC----------------------------------------CCCchHHHHHHHHH
Confidence 01378999999988652 22335699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+++.++.++... ||+||+|+||+|+|++.+.
T Consensus 159 ~~~~~~la~~~~~~----gi~v~~v~Pg~v~t~~~~~ 191 (254)
T 1sby_A 159 VSFTNSLAKLAPIT----GVTAYSINPGITRTPLVHT 191 (254)
T ss_dssp HHHHHHHHHHHHHH----SEEEEEEEECSEESHHHHS
T ss_pred HHHHHHHHHHhccC----CeEEEEEecCCccCccccc
Confidence 99999999887755 9999999999999998654
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.6e-20 Score=169.57 Aligned_cols=144 Identities=21% Similarity=0.262 Sum_probs=111.1
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.++.++.||++|.++++++++.+.+++|++|+||||||+.....+.+.+ ++|++.+++|+.+++.+++.+++.|++.+
T Consensus 83 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~- 161 (279)
T 1xg5_A 83 GTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN- 161 (279)
T ss_dssp SEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-
T ss_pred ceEEEEEecCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence 4678899999999999999999999999999999999998766665555 88888888888888888887777664310
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 162 -------------------------------------------------------------------------------- 161 (279)
T 1xg5_A 162 -------------------------------------------------------------------------------- 161 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
.++|+||++||..+.... +..+...|++||+++.
T Consensus 162 --------~~~g~iv~isS~~~~~~~--------------------------------------~~~~~~~Y~~sK~a~~ 195 (279)
T 1xg5_A 162 --------VDDGHIININSMSGHRVL--------------------------------------PLSVTHFYSATKYAVT 195 (279)
T ss_dssp --------CCSCEEEEECCGGGTSCC--------------------------------------SCGGGHHHHHHHHHHH
T ss_pred --------CCCceEEEEcChhhcccC--------------------------------------CCCCCchhHHHHHHHH
Confidence 001566666666554200 0112345999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
.|++.++.++... +.||++|+|+||+|+|++.
T Consensus 196 ~~~~~la~e~~~~--~~~i~v~~v~Pg~v~t~~~ 227 (279)
T 1xg5_A 196 ALTEGLRQELREA--QTHIRATCISPGVVETQFA 227 (279)
T ss_dssp HHHHHHHHHHHHT--TCCCEEEEEEESCBCSSHH
T ss_pred HHHHHHHHHHhhc--CCCeEEEEEecCcccchhh
Confidence 9999999998721 3499999999999999985
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.5e-21 Score=195.74 Aligned_cols=145 Identities=16% Similarity=0.149 Sum_probs=119.1
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccC--CCceEE
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRP--HARVVN 183 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~--~g~iv~ 183 (313)
..+|..|.++++++++.+.++||++|+||||||+...+++ .++|+.+|++|++|+++++++++|+|++ +|+||+
T Consensus 68 ~~~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVn 147 (604)
T 2et6_A 68 AVADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVN 147 (604)
T ss_dssp EEEECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 3457777778899999999999999999999999877665 3789999999999999999999999965 489999
Q ss_pred ecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCC
Q psy2266 184 VASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRR 263 (313)
Q Consensus 184 vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~ 263 (313)
+||.++... ..+..+|++||+|+.+|++.++.|+++.
T Consensus 148 isS~ag~~~----------------------------------------~~~~~~Y~asKaal~~lt~~la~El~~~--- 184 (604)
T 2et6_A 148 TSSPAGLYG----------------------------------------NFGQANYASAKSALLGFAETLAKEGAKY--- 184 (604)
T ss_dssp ECCHHHHHC----------------------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGG---
T ss_pred ECCHHHcCC----------------------------------------CCCchHHHHHHHHHHHHHHHHHHHhCcc---
Confidence 999998752 2344569999999999999999999877
Q ss_pred CCeEEEeeccccccccccccc------CCCCcchhhhhhhhh
Q psy2266 264 PDIIVNPVHPGYVNTDLTEHK------GVLTPEQGKIRQKIY 299 (313)
Q Consensus 264 ~gI~vn~v~PG~v~T~~~~~~------~~~~~~~~~~~~~~~ 299 (313)
||+||+|+|| +.|+|.... ....|++.+....++
T Consensus 185 -gIrVn~v~Pg-~~T~m~~~~~~~~~~~~~~pe~vA~~v~~L 224 (604)
T 2et6_A 185 -NIKANAIAPL-ARSRMTESIMPPPMLEKLGPEKVAPLVLYL 224 (604)
T ss_dssp -TEEEEEEEEC-CCCHHHHTTSCHHHHTTCSHHHHHHHHHHH
T ss_pred -CeEEEEEccC-CcCccccccCChhhhccCCHHHHHHHHHHH
Confidence 9999999998 699986542 123455555554443
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.6e-20 Score=169.52 Aligned_cols=137 Identities=25% Similarity=0.379 Sum_probs=102.9
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
+.++.++.||++|+++++++++.+.+++|++|+||||||+.. .++|++.+++|+.+++.+++++.+.|++.+.
T Consensus 57 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~-------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 129 (267)
T 2gdz_A 57 PQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNN-------EKNWEKTLQINLVSVISGTYLGLDYMSKQNG 129 (267)
T ss_dssp GGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGT
T ss_pred CCceEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccC
Confidence 446788899999999999999999999999999999999753 1345666666666666666665555533100
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 130 -------------------------------------------------------------------------------- 129 (267)
T 2gdz_A 130 -------------------------------------------------------------------------------- 129 (267)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
.+.|+||++||..+... ..+...|++||+++.
T Consensus 130 --------~~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~ 161 (267)
T 2gdz_A 130 --------GEGGIIINMSSLAGLMP----------------------------------------VAQQPVYCASKHGIV 161 (267)
T ss_dssp --------CCCEEEEEECCGGGTSC----------------------------------------CTTCHHHHHHHHHHH
T ss_pred --------CCCCEEEEeCCccccCC----------------------------------------CCCCchHHHHHHHHH
Confidence 01378999999988652 223356999999999
Q ss_pred HHHHHH--HhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 248 KLSFIQ--HATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 248 ~l~~~~--~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.+++.+ +.++++. ||+||+|+||+|+|++...
T Consensus 162 ~~~~~~ala~e~~~~----gi~v~~v~Pg~v~t~~~~~ 195 (267)
T 2gdz_A 162 GFTRSAALAANLMNS----GVRLNAICPGFVNTAILES 195 (267)
T ss_dssp HHHHHHHHHHHHHTC----CEEEEEEEESCBSSHHHHG
T ss_pred HHHHHHHHHHHhccC----CcEEEEEecCcCcchhhhc
Confidence 999985 4666655 9999999999999998654
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-20 Score=189.82 Aligned_cols=149 Identities=19% Similarity=0.265 Sum_probs=102.9
Q ss_pred EeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEec
Q psy2266 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNVAS 93 (313)
Q Consensus 15 ~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS 93 (313)
.+|++|.++++++++.+.+++|+||+||||||+.....+.+++ ++|++++++|+.|++.++|+++|.|++.
T Consensus 80 ~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~-------- 151 (613)
T 3oml_A 80 VADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ-------- 151 (613)
T ss_dssp EECCCCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--------
T ss_pred EEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------
Confidence 5899999999999999999999999999999998877777766 8899999888888888888888877552
Q ss_pred ccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhh
Q psy2266 94 KLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
T Consensus 152 -------------------------------------------------------------------------------- 151 (613)
T 3oml_A 152 -------------------------------------------------------------------------------- 151 (613)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHH
Q psy2266 174 LLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQ 253 (313)
Q Consensus 174 ~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~ 253 (313)
+.|+||++||.++.. +..+..+|++||+|+..|++.+
T Consensus 152 ---~~g~IV~isS~a~~~----------------------------------------~~~~~~~Y~asKaal~~lt~~l 188 (613)
T 3oml_A 152 ---NYGRIIMTSSNSGIY----------------------------------------GNFGQVNYTAAKMGLIGLANTV 188 (613)
T ss_dssp ---TCEEEEEECCHHHHH----------------------------------------CCTTCHHHHHHHHHHHHHHHHH
T ss_pred ---CCCEEEEECCHHHcC----------------------------------------CCCCChHHHHHHHHHHHHHHHH
Confidence 125666666666654 1233456999999999999999
Q ss_pred HhhhccCCCCCCeEEEeeccccccccccccc------CCCCcchhhhhhhhh
Q psy2266 254 HATLSKDKRRPDIIVNPVHPGYVNTDLTEHK------GVLTPEQGKIRQKIY 299 (313)
Q Consensus 254 ~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~------~~~~~~~~~~~~~~~ 299 (313)
+.++++. ||+||+|+||++ |+|.... ....|++.+....++
T Consensus 189 a~e~~~~----gI~vn~v~Pg~~-t~~~~~~~~~~~~~~~~pedvA~~v~~L 235 (613)
T 3oml_A 189 AIEGARN----NVLCNVIVPTAA-SRMTEGILPDILFNELKPKLIAPVVAYL 235 (613)
T ss_dssp HHHHGGG----TEEEEEEEEC-------CCCCCHHHHTTCCGGGTHHHHHHT
T ss_pred HHHhCcc----CeEEEEEECCCC-ChhhhhccchhhhhcCCHHHHHHHHHHh
Confidence 9999877 999999999975 7765542 134556655554444
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=7.7e-20 Score=163.49 Aligned_cols=134 Identities=23% Similarity=0.210 Sum_probs=103.0
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
..++.+|++|.++++++++ ++|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 54 ~~~~~~D~~~~~~~~~~~~----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~----- 124 (244)
T 3d3w_A 54 IEPVCVDLGDWEATERALG----SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIA----- 124 (244)
T ss_dssp CEEEECCTTCHHHHHHHHT----TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----
T ss_pred CCEEEEeCCCHHHHHHHHH----HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----
Confidence 4567999999999888776 678999999999987655555554 778888877777777777777766543
Q ss_pred EEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHH
Q psy2266 90 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCH 169 (313)
Q Consensus 90 ~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 169 (313)
T Consensus 125 -------------------------------------------------------------------------------- 124 (244)
T 3d3w_A 125 -------------------------------------------------------------------------------- 124 (244)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcccC-CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 170 ILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 170 ~~~p~l~~-~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
++ .|+||++||..+... ..+...|++||+++..
T Consensus 125 ------~~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~~ 158 (244)
T 3d3w_A 125 ------RGVPGAIVNVSSQCSQRA----------------------------------------VTNHSVYCSTKGALDM 158 (244)
T ss_dssp ------HTCCEEEEEECCGGGTSC----------------------------------------CTTBHHHHHHHHHHHH
T ss_pred ------CCCCcEEEEeCchhhccC----------------------------------------CCCCchHHHHHHHHHH
Confidence 11 256666666665431 1233469999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+++.++.++++. ||++|+|+||+|.|++...
T Consensus 159 ~~~~la~e~~~~----~i~v~~v~Pg~v~t~~~~~ 189 (244)
T 3d3w_A 159 LTKVMALELGPH----KIRVNAVNPTVVMTSMGQA 189 (244)
T ss_dssp HHHHHHHHHGGG----TEEEEEEEECCBTTTTHHH
T ss_pred HHHHHHHHhccc----CeEEEEEEeccccccchhh
Confidence 999999998766 9999999999999998653
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.5e-20 Score=167.60 Aligned_cols=132 Identities=15% Similarity=0.226 Sum_probs=97.7
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++..+ ||+ .++++++++.+ .++|+||||||+....++.+.+ ++|++++++|+.+++.++|++.|.|++.
T Consensus 61 ~~~~~-~D~--~~~~~~~~~~~----~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--- 130 (249)
T 1o5i_A 61 HRYVV-CDL--RKDLDLLFEKV----KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK--- 130 (249)
T ss_dssp SEEEE-CCT--TTCHHHHHHHS----CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---
T ss_pred CeEEE-eeH--HHHHHHHHHHh----cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---
Confidence 45666 999 45666666554 3899999999987765555555 7788888777777777777766666431
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 131 -------------------------------------------------------------------------------- 130 (249)
T 1o5i_A 131 -------------------------------------------------------------------------------- 130 (249)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
+.|+||++||..+... ..+...|++||+++..
T Consensus 131 --------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~~ 162 (249)
T 1o5i_A 131 --------GWGRIVAITSFSVISP----------------------------------------IENLYTSNSARMALTG 162 (249)
T ss_dssp --------TCEEEEEECCGGGTSC----------------------------------------CTTBHHHHHHHHHHHH
T ss_pred --------CCcEEEEEcchHhcCC----------------------------------------CCCCchHHHHHHHHHH
Confidence 1256666666665431 2233569999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+++.++.++++. ||+||+|+||+|+|++...
T Consensus 163 ~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 193 (249)
T 1o5i_A 163 FLKTLSFEVAPY----GITVNCVAPGWTETERVKE 193 (249)
T ss_dssp HHHHHHHHHGGG----TEEEEEEEECSBCCTTHHH
T ss_pred HHHHHHHHhhhc----CeEEEEEeeCCCccCcccc
Confidence 999999998876 9999999999999998654
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.81 E-value=9.7e-21 Score=170.23 Aligned_cols=137 Identities=23% Similarity=0.190 Sum_probs=86.8
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.++.+|+++.++ .+.+..+.+++|++|+||||||+.....+.+.+ ++|++++++|+.+++.+++++.|.|++
T Consensus 49 ~~~~~~~D~~~~~~-~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~---- 123 (245)
T 3e9n_A 49 GVEPIESDIVKEVL-EEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRA---- 123 (245)
T ss_dssp TEEEEECCHHHHHH-TSSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHH----
T ss_pred CCcceecccchHHH-HHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh----
Confidence 47788999998877 444555556789999999999998776666665 777777777777777766666665533
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 124 -------------------------------------------------------------------------------- 123 (245)
T 3e9n_A 124 -------------------------------------------------------------------------------- 123 (245)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
.+|+||++||..+... ..+...|++||+|+..
T Consensus 124 --------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK~a~~~ 155 (245)
T 3e9n_A 124 --------ASGCVIYINSGAGNGP----------------------------------------HPGNTIYAASKHALRG 155 (245)
T ss_dssp --------HTCEEEEEC--------------------------------------------------CHHHHHHHHHHHH
T ss_pred --------cCCeEEEEcCcccccC----------------------------------------CCCchHHHHHHHHHHH
Confidence 1356666666665441 1233469999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|++.++.++++. ||+||+|+||+|+|++.+.
T Consensus 156 ~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 186 (245)
T 3e9n_A 156 LADAFRKEEANN----GIRVSTVSPGPTNTPMLQG 186 (245)
T ss_dssp HHHHHHHHHGGG----TCEEEEEEECCC-------
T ss_pred HHHHHHHHhhhc----CeEEEEEecCCccCchhhh
Confidence 999999998876 9999999999999998765
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=166.59 Aligned_cols=139 Identities=17% Similarity=0.186 Sum_probs=105.0
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEEC-CCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNN-AGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnN-AGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.++.||++|.++++++++.+.+++|++|+|||| ||+......+...++|++++++|+.+++.+++++.|.|++
T Consensus 79 ~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---- 154 (286)
T 1xu9_A 79 SAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ---- 154 (286)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH----
T ss_pred ceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHH----
Confidence 68889999999999999999999999999999999 6776543333333777777777777777777766665533
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 155 -------------------------------------------------------------------------------- 154 (286)
T 1xu9_A 155 -------------------------------------------------------------------------------- 154 (286)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
.+|+||++||..+... ..+...|++||+++..
T Consensus 155 --------~~g~iv~isS~~~~~~----------------------------------------~~~~~~Y~asK~a~~~ 186 (286)
T 1xu9_A 155 --------SNGSIVVVSSLAGKVA----------------------------------------YPMVAAYSASKFALDG 186 (286)
T ss_dssp --------HTCEEEEEEEGGGTSC----------------------------------------CTTCHHHHHHHHHHHH
T ss_pred --------CCCEEEEECCcccccC----------------------------------------CCCccHHHHHHHHHHH
Confidence 1255666666555431 1233469999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+++.++.++... ..||+|++|+||+|+|++..
T Consensus 187 ~~~~l~~e~~~~--~~~i~v~~v~Pg~v~t~~~~ 218 (286)
T 1xu9_A 187 FFSSIRKEYSVS--RVNVSITLCVLGLIDTETAM 218 (286)
T ss_dssp HHHHHHHHHHHH--TCCCEEEEEEECCBCCHHHH
T ss_pred HHHHHHHHHhhc--CCCeEEEEeecCccCChhHH
Confidence 999999998421 34999999999999999864
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.2e-19 Score=158.64 Aligned_cols=149 Identities=20% Similarity=0.153 Sum_probs=122.0
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----h----hhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----Q----RAE 154 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~----~~~ 154 (313)
+++.+|+.+++... ..+. ....+|..++++++++++.+ +.+|++|+++||||.....++. + +|+
T Consensus 24 ~~G~~V~~~~r~~~-~~~~------~~~~~D~~~~~~~~~~~~~~-~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~ 95 (242)
T 1uay_A 24 ARGYRVVVLDLRRE-GEDL------IYVEGDVTREEDVRRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFR 95 (242)
T ss_dssp HHTCEEEEEESSCC-SSSS------EEEECCTTCHHHHHHHHHHH-HHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHH
T ss_pred HCCCEEEEEccCcc-ccce------EEEeCCCCCHHHHHHHHHHH-HhhCCceEEEEcccccCcccccccccccchHHHH
Confidence 34778887776543 1111 33567888999999999999 9999999999999987666543 2 899
Q ss_pred hhhhcccccHHHHHHHHhhcccCCC--------ceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhh
Q psy2266 155 TTLATNFFALVTVCHILFPLLRPHA--------RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKE 226 (313)
Q Consensus 155 ~~~~~N~~g~~~~~~~~~p~l~~~g--------~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (313)
.++++|+.|++.+++++.|.|++.+ +||++||..+...
T Consensus 96 ~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------------------------- 141 (242)
T 1uay_A 96 RVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG---------------------------------- 141 (242)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC----------------------------------
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC----------------------------------
Confidence 9999999999999999999997632 9999999987652
Q ss_pred cccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 227 GKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 227 ~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+...|++||+++..+++.++.++++. ||++++|+||+|.|++...
T Consensus 142 ------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~----gi~v~~v~Pg~v~t~~~~~ 188 (242)
T 1uay_A 142 ------QIGQAAYAASKGGVVALTLPAARELAGW----GIRVVTVAPGLFDTPLLQG 188 (242)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSCSSHHHHT
T ss_pred ------CCCCchhhHHHHHHHHHHHHHHHHHhhc----CcEEEEEEeccCcchhhhc
Confidence 2234569999999999999999998866 9999999999999998654
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=3.7e-19 Score=158.82 Aligned_cols=133 Identities=23% Similarity=0.216 Sum_probs=101.8
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
..++.+|++|.++++++++ .+|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 54 ~~~~~~D~~~~~~~~~~~~----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----- 124 (244)
T 1cyd_A 54 IEPVCVDLGDWDATEKALG----GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMIN----- 124 (244)
T ss_dssp CEEEECCTTCHHHHHHHHT----TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----
T ss_pred CCcEEecCCCHHHHHHHHH----HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh-----
Confidence 4567999999999888776 678999999999987755555554 777888877777777777776666532
Q ss_pred EEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHH
Q psy2266 90 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCH 169 (313)
Q Consensus 90 ~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 169 (313)
T Consensus 125 -------------------------------------------------------------------------------- 124 (244)
T 1cyd_A 125 -------------------------------------------------------------------------------- 124 (244)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcccC-CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 170 ILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 170 ~~~p~l~~-~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
++ .++||++||..+... ..+...|++||+++..
T Consensus 125 ------~~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~~ 158 (244)
T 1cyd_A 125 ------RGVPGSIVNVSSMVAHVT----------------------------------------FPNLITYSSTKGAMTM 158 (244)
T ss_dssp ------HTCCEEEEEECCGGGTSC----------------------------------------CTTBHHHHHHHHHHHH
T ss_pred ------CCCCeEEEEEcchhhcCC----------------------------------------CCCcchhHHHHHHHHH
Confidence 11 256666666665431 1233469999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+++.++.+++.. ||++++|+||+|.|++..
T Consensus 159 ~~~~~a~~~~~~----gi~v~~v~pg~v~t~~~~ 188 (244)
T 1cyd_A 159 LTKAMAMELGPH----KIRVNSVNPTVVLTDMGK 188 (244)
T ss_dssp HHHHHHHHHGGG----TEEEEEEEECCBTTHHHH
T ss_pred HHHHHHHHhhhc----CeEEEEEecCcccCcccc
Confidence 999999998766 999999999999999865
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2e-19 Score=161.96 Aligned_cols=177 Identities=14% Similarity=0.129 Sum_probs=110.0
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHc-CCccEEEeccCcCCCCCcchhh
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYN-GPLDKILDTAMDTAPGSFGQRA 153 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-G~lD~Linna~~~~~~~~~~~~ 153 (313)
++++..+ +++.+|+.+++....... ...+|..+.++++++++ ++ |++|+||||||.... .+.|
T Consensus 15 ~~~a~~l~~~G~~V~~~~r~~~~~~~--------~~~~Dl~~~~~v~~~~~----~~~~~id~lv~~Ag~~~~---~~~~ 79 (257)
T 1fjh_A 15 AATRKVLEAAGHQIVGIDIRDAEVIA--------DLSTAEGRKQAIADVLA----KCSKGMDGLVLCAGLGPQ---TKVL 79 (257)
T ss_dssp HHHHHHHHHTTCEEEEEESSSSSEEC--------CTTSHHHHHHHHHHHHT----TCTTCCSEEEECCCCCTT---CSSH
T ss_pred HHHHHHHHHCCCEEEEEeCCchhhcc--------ccccCCCCHHHHHHHHH----HhCCCCCEEEECCCCCCC---cccH
Confidence 3444333 457788877765433221 14456667777766665 45 999999999997652 2349
Q ss_pred hhhhhcccccHHHHHHHHhhcccCC--CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhccccc
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRPH--ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKE 231 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~~--g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (313)
+.++++|+.|++.++++++|.|+++ |+||++||..+.............+..... +.... ..+ ...
T Consensus 80 ~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------~~~--~~~ 147 (257)
T 1fjh_A 80 GNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEE--AKARA--------IVE--HAG 147 (257)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCH--HHHHH--------HHH--TCC
T ss_pred HHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccch--hhhhh--------hhh--ccc
Confidence 9999999999999999999999764 899999999886321100000000000000 00000 000 001
Q ss_pred CCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 232 AGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 232 ~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
...+...|++||+++..+++.+++++++. ||+||+|+||+|+|++.+.
T Consensus 148 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 195 (257)
T 1fjh_A 148 EQGGNLAYAGSKNALTVAVRKRAAAWGEA----GVRLNTIAPGATETPLLQA 195 (257)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTHHHHHHT----TCEEEEEEECC--------
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHhhc----CeEEEEEeeCCCCCccchh
Confidence 11233469999999999999999998766 9999999999999998764
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.2e-18 Score=170.46 Aligned_cols=79 Identities=8% Similarity=0.051 Sum_probs=67.8
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
++.|.++.++.||++|.++++++++.+. ++|+||+||||||+.....+.+++ ++|++++++|+.|++.|.+++.+.|+
T Consensus 311 ~~~g~~v~~~~~Dvtd~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~ 389 (525)
T 3qp9_A 311 ADLGATATVVTCDLTDAEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAA 389 (525)
T ss_dssp HHHTCEEEEEECCTTSHHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HhcCCEEEEEECCCCCHHHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 3457889999999999999999999998 799999999999999877777776 88999998888888888888877765
Q ss_pred C
Q psy2266 84 P 84 (313)
Q Consensus 84 ~ 84 (313)
+
T Consensus 390 ~ 390 (525)
T 3qp9_A 390 A 390 (525)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.5e-17 Score=144.55 Aligned_cols=128 Identities=20% Similarity=0.141 Sum_probs=100.3
Q ss_pred eEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEE
Q psy2266 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVN 90 (313)
Q Consensus 12 ~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~ 90 (313)
.++.+|++|.++++++++. +|++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++ .+
T Consensus 45 ~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~---~~------- 110 (207)
T 2yut_A 45 RALPADLADELEAKALLEE----AGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA---RF------- 110 (207)
T ss_dssp EECCCCTTSHHHHHHHHHH----HCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC---CE-------
T ss_pred cEEEeeCCCHHHHHHHHHh----cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH---Hh-------
Confidence 6788999999999988876 79999999999998766666665 788888888888888888765 11
Q ss_pred EecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHH
Q psy2266 91 VASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHI 170 (313)
Q Consensus 91 isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 170 (313)
T Consensus 111 -------------------------------------------------------------------------------- 110 (207)
T 2yut_A 111 -------------------------------------------------------------------------------- 110 (207)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHH
Q psy2266 171 LFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLS 250 (313)
Q Consensus 171 ~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~ 250 (313)
.+.++||++||..+... ..+...|++||+++..++
T Consensus 111 -----~~~~~iv~~sS~~~~~~----------------------------------------~~~~~~Y~~sK~a~~~~~ 145 (207)
T 2yut_A 111 -----QKGARAVFFGAYPRYVQ----------------------------------------VPGFAAYAAAKGALEAYL 145 (207)
T ss_dssp -----EEEEEEEEECCCHHHHS----------------------------------------STTBHHHHHHHHHHHHHH
T ss_pred -----cCCcEEEEEcChhhccC----------------------------------------CCCcchHHHHHHHHHHHH
Confidence 11256777777665431 223346999999999999
Q ss_pred HHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 251 FIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 251 ~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+.++.++++. ||++++|+||++.|++..
T Consensus 146 ~~~~~~~~~~----gi~v~~v~pg~v~t~~~~ 173 (207)
T 2yut_A 146 EAARKELLRE----GVHLVLVRLPAVATGLWA 173 (207)
T ss_dssp HHHHHHHHTT----TCEEEEECCCCBCSGGGG
T ss_pred HHHHHHHhhh----CCEEEEEecCcccCCCcc
Confidence 9999988765 999999999999999844
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.71 E-value=5.1e-17 Score=141.03 Aligned_cols=146 Identities=12% Similarity=0.112 Sum_probs=114.4
Q ss_pred HHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----h
Q psy2266 76 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----Q 151 (313)
Q Consensus 76 ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~ 151 (313)
++++..+.++..|+.+++... ...+|..++++++++++.+ |++|+++||||.....++. +
T Consensus 17 ~~~~~~l~~g~~V~~~~r~~~------------~~~~D~~~~~~~~~~~~~~----~~~d~vi~~ag~~~~~~~~~~~~~ 80 (202)
T 3d7l_A 17 SAVKERLEKKAEVITAGRHSG------------DVTVDITNIDSIKKMYEQV----GKVDAIVSATGSATFSPLTELTPE 80 (202)
T ss_dssp HHHHHHHTTTSEEEEEESSSS------------SEECCTTCHHHHHHHHHHH----CCEEEEEECCCCCCCCCGGGCCHH
T ss_pred HHHHHHHHCCCeEEEEecCcc------------ceeeecCCHHHHHHHHHHh----CCCCEEEECCCCCCCCChhhCCHH
Confidence 334333335677777765432 2456888988888877654 9999999999987766653 6
Q ss_pred hhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhccccc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKE 231 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (313)
+|+..+++|+.|++.+++++.|.|+++++||++||..+...
T Consensus 81 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~--------------------------------------- 121 (202)
T 3d7l_A 81 KNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDP--------------------------------------- 121 (202)
T ss_dssp HHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSC---------------------------------------
T ss_pred HHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCC---------------------------------------
Confidence 88999999999999999999999987899999999887541
Q ss_pred CCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 232 AGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 232 ~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
..+...|++||+++..+++.++.++ + +||++++|+||++.|++..
T Consensus 122 -~~~~~~Y~~sK~~~~~~~~~~~~e~-~----~gi~v~~v~pg~v~~~~~~ 166 (202)
T 3d7l_A 122 -IVQGASAAMANGAVTAFAKSAAIEM-P----RGIRINTVSPNVLEESWDK 166 (202)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHTTSC-S----TTCEEEEEEECCBGGGHHH
T ss_pred -CCccHHHHHHHHHHHHHHHHHHHHc-c----CCeEEEEEecCccCCchhh
Confidence 2233569999999999997766665 3 4999999999999999743
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.2e-17 Score=176.99 Aligned_cols=76 Identities=13% Similarity=0.125 Sum_probs=61.7
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHH-----cC-CCcEEEECCCCCCCC-CCCCh---hHHHHHHHhHHHHHHHHHHHH
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQ-----HG-GLDLLVNNAGIYRDT-APGSF---GQRAETTLATNFFALVTVCHI 77 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~-----~g-~iDilVnNAGi~~~~-~~~~~---~~~~~~~~~vNl~~~i~l~ra 77 (313)
|.++.++.||++|.++++++++.+.++ +| +||+||||||+.... ++.++ .++|++++++|+.+++.++++
T Consensus 530 Ga~V~vV~~DVTD~esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqa 609 (1688)
T 2pff_A 530 GSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKK 609 (1688)
T ss_dssp TCEEEEEECCSSSTTHHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 667899999999999999999999988 78 999999999998765 55554 377888887777777777776
Q ss_pred H--Hhccc
Q psy2266 78 L--FPLLR 83 (313)
Q Consensus 78 ~--~~~m~ 83 (313)
+ .+.|+
T Consensus 610 a~~lp~M~ 617 (1688)
T 2pff_A 610 QKSARGIE 617 (1688)
T ss_dssp HHHHHTCT
T ss_pred HHhChHHH
Confidence 5 44443
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.8e-17 Score=180.77 Aligned_cols=76 Identities=13% Similarity=0.125 Sum_probs=61.1
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHH-----cC-CCcEEEECCCCCCCC-CCCCh---hHHHHHHHhHHHHHHHHHHHH
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQ-----HG-GLDLLVNNAGIYRDT-APGSF---GQRAETTLATNFFALVTVCHI 77 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~-----~g-~iDilVnNAGi~~~~-~~~~~---~~~~~~~~~vNl~~~i~l~ra 77 (313)
|.++.++.||++|.++++++++.+.++ +| +||+||||||+.... ++.++ .++|++++++|+.+++.++++
T Consensus 729 g~~v~~v~~DVsd~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a 808 (1887)
T 2uv8_A 729 GSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKK 808 (1887)
T ss_dssp TCEEEEEECCTTCHHHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCeEEEEEecCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999999999988 67 999999999998765 55544 377888887777777777776
Q ss_pred H--Hhccc
Q psy2266 78 L--FPLLR 83 (313)
Q Consensus 78 ~--~~~m~ 83 (313)
+ .|.|+
T Consensus 809 ~~~lp~m~ 816 (1887)
T 2uv8_A 809 QKSARGIE 816 (1887)
T ss_dssp HHHTTTCC
T ss_pred HHhhhhhh
Confidence 5 44443
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1e-16 Score=177.16 Aligned_cols=71 Identities=18% Similarity=0.212 Sum_probs=60.4
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHH---cC-CCcEEEECCCCCCCC-CCCChh---HHHHHHHhHHHHHHHHHHHH
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQ---HG-GLDLLVNNAGIYRDT-APGSFG---QRAETTLATNFFALVTVCHI 77 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~---~g-~iDilVnNAGi~~~~-~~~~~~---~~~~~~~~vNl~~~i~l~ra 77 (313)
.|.++.++.||++|.++++++++.+.++ || +||+||||||+.... ++.+++ ++|++++++|+.+++.++++
T Consensus 705 ~G~~v~~v~~DVsd~esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a 783 (1878)
T 2uv9_A 705 RGSQLVVVPFNQGSKQDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKT 783 (1878)
T ss_dssp TTCEEEEEECCTTCHHHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cCCeEEEEEcCCCCHHHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 3678899999999999999999999998 99 999999999998765 666553 78888888888887777765
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.65 E-value=9.6e-17 Score=167.78 Aligned_cols=131 Identities=16% Similarity=0.181 Sum_probs=102.9
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
+++.|.++.+++||++|.++++++++.+.+++ +||+||||||+.....+.+++ ++|++++
T Consensus 579 l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~------------------ 639 (795)
T 3slk_A 579 LTAYGAEVSLQACDVADRETLAKVLASIPDEH-PLTAVVHAAGVLDDGVSESLTVERLDQVL------------------ 639 (795)
T ss_dssp HHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS-CEEEEEECCCCCCCCCGGGCCHHHHHHHH------------------
T ss_pred HHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC-CCEEEEECCCcCCCCchhhCCHHHHHHHH------------------
Confidence 34568889999999999999999999998776 999999999999877666665 5555554
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++|+.
T Consensus 640 ---------------------------------------------------------------------------~~nv~ 644 (795)
T 3slk_A 640 ---------------------------------------------------------------------------RPKVD 644 (795)
T ss_dssp ---------------------------------------------------------------------------CCCCC
T ss_pred ---------------------------------------------------------------------------HHHHH
Confidence 66666
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
|++++++++.|.| +||++||.++.. +..+...|+++
T Consensus 645 G~~~l~~~~~~~l----~iV~~SS~ag~~----------------------------------------g~~g~~~YaAa 680 (795)
T 3slk_A 645 GARNLLELIDPDV----ALVLFSSVSGVL----------------------------------------GSGGQGNYAAA 680 (795)
T ss_dssp HHHHHHHHSCTTS----EEEEEEETHHHH----------------------------------------TCSSCHHHHHH
T ss_pred HHHHHHHHHhhCC----EEEEEccHHhcC----------------------------------------CCCCCHHHHHH
Confidence 6666666666666 688888888765 23445569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
|+ |++.++++++.+ ||++|+|+||++.|++
T Consensus 681 ka----~~~alA~~~~~~----Gi~v~sI~pG~v~t~g 710 (795)
T 3slk_A 681 NS----FLDALAQQRQSR----GLPTRSLAWGPWAEHG 710 (795)
T ss_dssp HH----HHHHHHHHHHHT----TCCEEEEEECCCSCCC
T ss_pred HH----HHHHHHHHHHHc----CCeEEEEECCeECcch
Confidence 97 555555777766 9999999999999875
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=3.1e-16 Score=155.88 Aligned_cols=76 Identities=12% Similarity=0.183 Sum_probs=62.2
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCC-CCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIY-RDTAPGSFG-QRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~-~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
+++.|.++.++.||++|.+++.++++.+.+. ++||+||||||+. ....+.+++ ++|++++++|+.+++.+.+++.+
T Consensus 287 l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~ 364 (496)
T 3mje_A 287 LEQLGVRVTIAACDAADREALAALLAELPED-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTAD 364 (496)
T ss_dssp HHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTT
T ss_pred HHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3456888999999999999999999998776 7999999999998 556666666 88888887777777777665544
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.58 E-value=3.1e-15 Score=133.35 Aligned_cols=176 Identities=19% Similarity=0.208 Sum_probs=115.2
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhh
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAE 154 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~ 154 (313)
++++..+ +++.+|+.+++....... ...+|..+.++++++++.+ .|++|+++||||.... .++|+
T Consensus 15 ~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~D~~~~~~~~~~~~~~---~~~~d~vi~~Ag~~~~---~~~~~ 80 (255)
T 2dkn_A 15 AALKELLARAGHTVIGIDRGQADIEA--------DLSTPGGRETAVAAVLDRC---GGVLDGLVCCAGVGVT---AANSG 80 (255)
T ss_dssp HHHHHHHHHTTCEEEEEESSSSSEEC--------CTTSHHHHHHHHHHHHHHH---TTCCSEEEECCCCCTT---SSCHH
T ss_pred HHHHHHHHhCCCEEEEEeCChhHccc--------cccCCcccHHHHHHHHHHc---CCCccEEEECCCCCCc---chhHH
Confidence 3343333 457788877765433221 1345555666666666533 4899999999997642 34689
Q ss_pred hhhhcccccHHHHHHHHhhcccCC--CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccC
Q psy2266 155 TTLATNFFALVTVCHILFPLLRPH--ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEA 232 (313)
Q Consensus 155 ~~~~~N~~g~~~~~~~~~p~l~~~--g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (313)
..+++|+.|++.+++++.|.|++. ++||++||..+...........+.... .+++...... + ..
T Consensus 81 ~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--------~----~~ 146 (255)
T 2dkn_A 81 LVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLA--GDEARAIELA--------E----QQ 146 (255)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHH--TCHHHHHHHH--------H----HH
T ss_pred HHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcc--cchhhhhhhc--------c----cc
Confidence 999999999999999999999764 899999999876422111000000000 0000000000 0 00
Q ss_pred CCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 233 GWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 233 ~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+...|+.||+++..+++.++.++... ||++++|+||+|.|++...
T Consensus 147 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~----gi~v~~v~pg~v~~~~~~~ 193 (255)
T 2dkn_A 147 GQTHLAYAGSKYAVTCLARRNVVDWAGR----GVRLNVVAPGAVETPLLQA 193 (255)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTHHHHHHT----TCEEEEEEECCBCSHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHhhc----CcEEEEEcCCcccchhhhh
Confidence 1233469999999999999888887755 9999999999999998654
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.2e-14 Score=167.67 Aligned_cols=79 Identities=16% Similarity=0.167 Sum_probs=59.4
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHH----HcCCCcEEEECCCC----CCCC-C-----CCChhHHHHHHHhHHHHHH
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQT----QHGGLDLLVNNAGI----YRDT-A-----PGSFGQRAETTLATNFFAL 71 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~----~~g~iDilVnNAGi----~~~~-~-----~~~~~~~~~~~~~vNl~~~ 71 (313)
..|.++..++||++|.++++++++.+.+ +||+||+||||||+ .... . .+++...|+..+++|+.++
T Consensus 2188 ~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~ 2267 (3089)
T 3zen_D 2188 RFDATLWVVPANMASYSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAV 2267 (3089)
T ss_dssp CTTCEEEEEECCTTCHHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHH
T ss_pred hcCCeEEEEEecCCCHHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 4567889999999999999999999988 89999999999998 2211 1 2222234455577777777
Q ss_pred HHHHHHHHhcccC
Q psy2266 72 VTVCHILFPLLRP 84 (313)
Q Consensus 72 i~l~ra~~~~m~~ 84 (313)
+.+++++.+.|++
T Consensus 2268 ~~l~~~~~~~m~~ 2280 (3089)
T 3zen_D 2268 QRLISGLSKIGAE 2280 (3089)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7777777776644
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=2.4e-14 Score=141.96 Aligned_cols=74 Identities=14% Similarity=0.172 Sum_probs=62.2
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHH
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILF 79 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~ 79 (313)
++.|.++.++.||++|.++++++++.+ +++|+||+||||||+.....+.+++ ++|++++++|+.+++.+.+++.
T Consensus 275 ~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~ 349 (486)
T 2fr1_A 275 EALGARTTVAACDVTDRESVRELLGGI-GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTR 349 (486)
T ss_dssp HHTTCEEEEEECCTTCHHHHHHHHHTS-CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred HhcCCEEEEEEeCCCCHHHHHHHHHHH-HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 445778999999999999999999998 5679999999999998876666655 8888888888888888777653
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.49 E-value=8.5e-14 Score=138.82 Aligned_cols=69 Identities=13% Similarity=0.186 Sum_probs=56.8
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHH
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHIL 78 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~ 78 (313)
++.|.++.++.||++|.++++++++. +++|+||||||+.....+.+.+ ++|+.++++|+.+++.+.+++
T Consensus 308 ~~~g~~v~~~~~Dvtd~~~v~~~~~~-----~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~ 377 (511)
T 2z5l_A 308 RGHGCEVVHAACDVAERDALAALVTA-----YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLT 377 (511)
T ss_dssp HTTTCEEEEEECCSSCHHHHHHHHHH-----SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcCCEEEEEEeCCCCHHHHHHHHhc-----CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34577899999999999999988876 7899999999998776665555 888888888888887777653
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.45 E-value=5.8e-14 Score=129.48 Aligned_cols=101 Identities=16% Similarity=0.138 Sum_probs=79.7
Q ss_pred HHHHhc-ccCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc-
Q psy2266 76 HILFPL-LRPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG- 150 (313)
Q Consensus 76 ra~~~~-m~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~- 150 (313)
++++.. .++|.+|+.+++....+.+. ..+++ ..+.+|..++++++++++.+.++||++|+||||||....+|+.
T Consensus 43 ~aiA~~la~~Ga~V~i~~r~~~~l~~~-~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~ 121 (273)
T 4fgs_A 43 LAAAKRFVAEGARVFITGRRKDVLDAA-IAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGE 121 (273)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTS
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHH-HHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhh
Confidence 344433 35678888887665544333 12222 1246788899999999999999999999999999998888874
Q ss_pred ---hhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 151 ---QRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 151 ---~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
++|+.++++|+.|+|+++++++|+|++
T Consensus 122 ~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~ 151 (273)
T 4fgs_A 122 VTEEQYDDTFDRNVKGVLFTVQKALPLLAR 151 (273)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHTTTEEE
T ss_pred ccHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 799999999999999999999999963
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.35 E-value=3e-12 Score=113.14 Aligned_cols=112 Identities=16% Similarity=0.195 Sum_probs=91.6
Q ss_pred eecCCHHHHHHHHHHHHHHcCCCcEEEECCCCC-CCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEec
Q psy2266 16 LDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIY-RDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNVAS 93 (313)
Q Consensus 16 ~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~-~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS 93 (313)
+|++|+++++++++. +|++|+||||||+. ...++.+.+ ++|++.+++|+.+++.++|++.|.|+++|+||++||
T Consensus 42 ~D~~~~~~v~~~~~~----~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS 117 (223)
T 3uce_A 42 LDISDEKSVYHYFET----IGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSG 117 (223)
T ss_dssp CCTTCHHHHHHHHHH----HCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred cCCCCHHHHHHHHHH----hCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecc
Confidence 899999999888764 59999999999997 445666666 999999999999999999999999998999999999
Q ss_pred ccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEec
Q psy2266 94 KLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDT 140 (313)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linn 140 (313)
..+....... ..+...+..+..+++.+...+++ +.+|+
T Consensus 118 ~~~~~~~~~~-------~~Y~asK~a~~~~~~~la~e~~~--i~vn~ 155 (223)
T 3uce_A 118 MLSRKVVANT-------YVKAAINAAIEATTKVLAKELAP--IRVNA 155 (223)
T ss_dssp GGGTSCCTTC-------HHHHHHHHHHHHHHHHHHHHHTT--SEEEE
T ss_pred hhhccCCCCc-------hHHHHHHHHHHHHHHHHHHhhcC--cEEEE
Confidence 9877644321 12334667788889999998888 44444
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.33 E-value=3.6e-12 Score=122.35 Aligned_cols=47 Identities=11% Similarity=0.027 Sum_probs=43.7
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR 49 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~ 49 (313)
.+++.|.++..+.||++|+++++++++.+++++|+||+||||+|...
T Consensus 106 ~i~~~G~~a~~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~ 152 (401)
T 4ggo_A 106 AAKREGLYSVTIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASPV 152 (401)
T ss_dssp HHHHHTCCEEEEESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCSE
T ss_pred HHHHcCCCceeEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEeccccc
Confidence 45677999999999999999999999999999999999999999874
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.3e-11 Score=111.83 Aligned_cols=72 Identities=22% Similarity=0.261 Sum_probs=54.6
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
+.++.++.+|++|.++++++++ ++|+||||||+... +.|++.+++|+.+++.+++++.+. ..++
T Consensus 42 ~~~~~~~~~Dl~d~~~~~~~~~-------~~D~vi~~Ag~~~~-------~~~~~~~~~N~~g~~~l~~a~~~~--~~~~ 105 (267)
T 3rft_A 42 GPNEECVQCDLADANAVNAMVA-------GCDGIVHLGGISVE-------KPFEQILQGNIIGLYNLYEAARAH--GQPR 105 (267)
T ss_dssp CTTEEEEECCTTCHHHHHHHHT-------TCSEEEECCSCCSC-------CCHHHHHHHHTHHHHHHHHHHHHT--TCCE
T ss_pred CCCCEEEEcCCCCHHHHHHHHc-------CCCEEEECCCCcCc-------CCHHHHHHHHHHHHHHHHHHHHHc--CCCE
Confidence 4568899999999999888776 69999999998421 357788888888888888887432 2356
Q ss_pred EEEEeccc
Q psy2266 88 VVNVASKL 95 (313)
Q Consensus 88 IV~isS~~ 95 (313)
||++||..
T Consensus 106 iv~~SS~~ 113 (267)
T 3rft_A 106 IVFASSNH 113 (267)
T ss_dssp EEEEEEGG
T ss_pred EEEEcchH
Confidence 66666644
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=3.6e-12 Score=146.55 Aligned_cols=85 Identities=11% Similarity=0.011 Sum_probs=56.2
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.|.++.++.||++|.++++++++.+. ++|+||+||||||+.....+.+++ ++|++++++|+.|++++.+++.+.|++
T Consensus 1934 ~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~ 2012 (2512)
T 2vz8_A 1934 RQGVQVLVSTSNASSLDGARSLITEAT-QLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE 2012 (2512)
T ss_dssp HTTCEEEEECCCSSSHHHHHHHHHHHH-HHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT
T ss_pred hCCCEEEEEecCCCCHHHHHHHHHHHH-hcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 457788999999999999999999987 489999999999998877777777 889988888888888777776665544
Q ss_pred CceEEEE
Q psy2266 85 HARVVNV 91 (313)
Q Consensus 85 ~g~IV~i 91 (313)
.++||++
T Consensus 2013 ~g~iV~i 2019 (2512)
T 2vz8_A 2013 LDYFVIF 2019 (2512)
T ss_dssp CCEEEEE
T ss_pred CCEEEEe
Confidence 3333333
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.21 E-value=2e-11 Score=111.01 Aligned_cols=74 Identities=14% Similarity=0.135 Sum_probs=68.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCceEE
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHARVVN 183 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~ 183 (313)
..+|..++++++++++.+.+++|++|+||||||....+++ .++|+.++++|+.|++.++++++|.|+++|+||+
T Consensus 73 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~ 150 (270)
T 3is3_A 73 IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVL 150 (270)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEE
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEE
Confidence 4678889999999999999999999999999999887775 3789999999999999999999999998889886
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.21 E-value=4.8e-11 Score=108.96 Aligned_cols=74 Identities=15% Similarity=0.165 Sum_probs=68.1
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhhcccCCCceEE
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFPLLRPHARVVN 183 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~ 183 (313)
..+|..++++++++++.+.+++|++|+||||||....+++. ++|+.++++|+.|++.++++++|.|+++|+||+
T Consensus 86 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~ 163 (271)
T 3v2g_A 86 IRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIIT 163 (271)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEE
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEE
Confidence 46788899999999999999999999999999998877753 789999999999999999999999988888887
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.19 E-value=6.9e-11 Score=104.49 Aligned_cols=123 Identities=11% Similarity=0.072 Sum_probs=94.3
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-----HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-----QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-----~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
++.++++|++|.++++++++.+ ++++++|+||||||+.....+.+.+ ++|++.+++|+.+++.+++++.+.|++
T Consensus 40 ~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 118 (242)
T 1uay_A 40 DLIYVEGDVTREEDVRRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRE 118 (242)
T ss_dssp SSEEEECCTTCHHHHHHHHHHH-HHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred ceEEEeCCCCCHHHHHHHHHHH-HhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 4577899999999999999999 8899999999999997655444332 499999999999999999999999976
Q ss_pred C--------ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEec
Q psy2266 85 H--------ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDT 140 (313)
Q Consensus 85 ~--------g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linn 140 (313)
. ++||++||..+.....+.. .....+.....+++.+...+++-.+.++.
T Consensus 119 ~~~~~~~~~~~iv~~sS~~~~~~~~~~~-------~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~ 175 (242)
T 1uay_A 119 NPPDAEGQRGVIVNTASVAAFEGQIGQA-------AYAASKGGVVALTLPAARELAGWGIRVVT 175 (242)
T ss_dssp CCCCTTSCSEEEEEECCTHHHHCCTTCH-------HHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred cCCCCCCCCeEEEEeCChhhccCCCCCc-------hhhHHHHHHHHHHHHHHHHHhhcCcEEEE
Confidence 3 3999999988765433211 12235566777777777777544444443
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.18 E-value=1.8e-11 Score=110.75 Aligned_cols=93 Identities=15% Similarity=0.085 Sum_probs=73.2
Q ss_pred cCCceEEEEecccccccCCCchh-hh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQE-LR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETT 156 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~-~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~ 156 (313)
++|.+|+.+++......+..... .+ ....+|..++++++++++.+.+++|++|+|+||||....+++ .++|+.+
T Consensus 30 ~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~ 109 (255)
T 4eso_A 30 EGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQ 109 (255)
T ss_dssp HTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHH
T ss_pred HCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHH
Confidence 55778888876554432221110 11 224668889999999999999999999999999999887775 3789999
Q ss_pred hhcccccHHHHHHHHhhcc
Q psy2266 157 LATNFFALVTVCHILFPLL 175 (313)
Q Consensus 157 ~~~N~~g~~~~~~~~~p~l 175 (313)
+++|+.|++.++++++|.|
T Consensus 110 ~~~N~~g~~~~~~~~~~~~ 128 (255)
T 4eso_A 110 FAVNTKGAFFTVQRLTPLI 128 (255)
T ss_dssp HHHHTHHHHHHHHHHGGGE
T ss_pred HHHhhHHHHHHHHHHHHHH
Confidence 9999999999999999976
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.16 E-value=2.8e-11 Score=109.53 Aligned_cols=68 Identities=10% Similarity=0.109 Sum_probs=61.0
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcC-CCCCc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDT-APGSF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~-~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
..+|..++++++++++.+.+++|++|+||||||.. ...++ .++|+.++++|+.|++.++++++|.|++
T Consensus 63 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 135 (259)
T 3edm_A 63 IKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK 135 (259)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred EEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 46788899999999999999999999999999987 55554 3789999999999999999999999975
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.14 E-value=3.9e-11 Score=109.38 Aligned_cols=67 Identities=10% Similarity=0.039 Sum_probs=61.5
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhhccc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFPLLR 176 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l~ 176 (313)
..+|..++++++++++.+.+++|++|+||||||....+++. ++|+.++++|+.|++.++++++|.|+
T Consensus 82 ~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 152 (267)
T 3u5t_A 82 AQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLR 152 (267)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45688899999999999999999999999999998877763 68999999999999999999999885
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.1e-10 Score=107.62 Aligned_cols=102 Identities=16% Similarity=0.181 Sum_probs=73.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-C
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-G 147 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~ 147 (313)
++++..+ ++|.+|+.+.+......+.....+ + ....+|..++++++++++.+.+++|++|+||||||.... .
T Consensus 61 ~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~ 140 (291)
T 3ijr_A 61 RAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQ 140 (291)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCS
T ss_pred HHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCC
Confidence 4444433 457777777654432111111111 1 124568889999999999999999999999999998754 3
Q ss_pred Cc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 148 SF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 148 ~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
++ .++|+.++++|+.|++.++++++|.|++
T Consensus 141 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 174 (291)
T 3ijr_A 141 GLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ 174 (291)
T ss_dssp SGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT
T ss_pred CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 43 4789999999999999999999999863
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1.2e-10 Score=105.46 Aligned_cols=108 Identities=12% Similarity=0.101 Sum_probs=81.0
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCch--hh---h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQ--EL---R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~--~~---~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++......+.... .. + ....+|..++++++++++.+.++||++|+|+||||.....+
T Consensus 22 ~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~ 101 (256)
T 4fs3_A 22 FGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMED 101 (256)
T ss_dssp HHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGG
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEeccccccccc
Confidence 3444433 5688888887765443322111 11 1 12457888999999999999999999999999999864432
Q ss_pred ----c----chhhhhhhhcccccHHHHHHHHhhcccCCCceEE
Q psy2266 149 ----F----GQRAETTLATNFFALVTVCHILFPLLRPHARVVN 183 (313)
Q Consensus 149 ----~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~ 183 (313)
+ .++|..++++|+.+.+.+++.+.|+|+++|+||+
T Consensus 102 ~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVn 144 (256)
T 4fs3_A 102 LRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVA 144 (256)
T ss_dssp GTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEE
T ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEE
Confidence 2 2678889999999999999999999999999986
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.5e-10 Score=105.91 Aligned_cols=104 Identities=13% Similarity=0.046 Sum_probs=79.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++......... .++. ....+|..++++++++++.+.+++|++|+||||||....++
T Consensus 46 ~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~ 124 (276)
T 3r1i_A 46 KKVALAYAEAGAQVAVAARHSDALQVVA-DEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQA 124 (276)
T ss_dssp HHHHHHHHHTTCEEEEEESSGGGGHHHH-HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 3444333 45778888877554432221 1111 12456888999999999999999999999999999988777
Q ss_pred c----chhhhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 149 F----GQRAETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 149 ~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
+ .++|+.++++|+.|++.++++++|.|++.+.
T Consensus 125 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~ 160 (276)
T 3r1i_A 125 MLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGL 160 (276)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5 3789999999999999999999999998664
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.8e-10 Score=104.52 Aligned_cols=67 Identities=7% Similarity=-0.026 Sum_probs=61.6
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhccc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLR 176 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~ 176 (313)
..+|..++++++++++.+.+++|++|+||||||....+++ .++|+.++++|+.|++.++++++|.|+
T Consensus 68 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 138 (262)
T 3ksu_A 68 YQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN 138 (262)
T ss_dssp EECCCCSHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc
Confidence 4668889999999999999999999999999999887776 378999999999999999999999984
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.06 E-value=1.4e-10 Score=105.34 Aligned_cols=175 Identities=19% Similarity=0.154 Sum_probs=131.6
Q ss_pred cCCceEEEEecccccccCCCchhh--h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL--R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAET 155 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~--~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~ 155 (313)
++|.+|+.+++......+. ...+ + ....+|..++++++++++.+.+++|++|+||||||....+++ .++|+.
T Consensus 28 ~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~ 106 (263)
T 2a4k_A 28 REGASLVAVDREERLLAEA-VAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEK 106 (263)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHH
T ss_pred HCCCEEEEEeCCHHHHHHH-HHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHH
Confidence 4577888777654332211 0011 1 224578889999999999999999999999999999876665 378999
Q ss_pred hhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCC
Q psy2266 156 TLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWP 235 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (313)
++++|+.|++.++++++|.|+++|+||++||..+. .. + +
T Consensus 107 ~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~-~---------------------------------------~ 145 (263)
T 2a4k_A 107 VLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GA-F---------------------------------------G 145 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CH-H---------------------------------------H
T ss_pred HHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CC-C---------------------------------------C
Confidence 99999999999999999999446999999999886 21 1 1
Q ss_pred CCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCc
Q psy2266 236 EFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNK 306 (313)
Q Consensus 236 ~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 306 (313)
...|++||+|+..+++.++.++++. ||+||+|+||+|+|++.... .++..+......|++|+++
T Consensus 146 ~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~~~~~~ 209 (263)
T 2a4k_A 146 LAHYAAGKLGVVGLARTLALELARK----GVRVNVLLPGLIQTPMTAGL---PPWAWEQEVGASPLGRAGR 209 (263)
T ss_dssp HHHHHHCSSHHHHHHHHHHHHHTTT----TCEEEEEEECSBCCGGGTTS---CHHHHHHHHHTSTTCSCBC
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhhh----CcEEEEEEeCcCcCchhhhc---CHHHHHHHHhcCCCCCCcC
Confidence 2359999999999999999988766 99999999999999997652 2222222333445666543
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=7.5e-10 Score=98.73 Aligned_cols=161 Identities=12% Similarity=0.001 Sum_probs=127.0
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHc--CCccEEEeccCcCCCCCc---
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYN--GPLDKILDTAMDTAPGSF--- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--G~lD~Linna~~~~~~~~--- 149 (313)
++++..+ ++|.+|+.+++....... ......+|..++++++++++.+.+++ |++|+||||||....+++
T Consensus 21 ~~ia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~ 95 (241)
T 1dhr_A 21 SRCVQAFRARNWWVASIDVVENEEAS-----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSK 95 (241)
T ss_dssp HHHHHHHHTTTCEEEEEESSCCTTSS-----EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCT
T ss_pred HHHHHHHHhCCCEEEEEeCChhhccC-----CcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCccc
Confidence 3444444 457788877765433221 11235678889999999999999999 899999999998765554
Q ss_pred --chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhc
Q psy2266 150 --GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEG 227 (313)
Q Consensus 150 --~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (313)
.++|+.++++|+.|++.++++++|.|+++|+||++||..+...
T Consensus 96 ~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------------------------- 140 (241)
T 1dhr_A 96 SLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG----------------------------------- 140 (241)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------------------------------
T ss_pred CCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC-----------------------------------
Confidence 3789999999999999999999999988899999999988651
Q ss_pred ccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 228 KDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 228 ~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+...|++||+|+..+++.++.+++. .++||+||+|+||+|+|++.+.
T Consensus 141 -----~~~~~~Y~asK~a~~~~~~~la~e~~~--~~~gi~v~~v~PG~v~T~~~~~ 189 (241)
T 1dhr_A 141 -----TPGMIGYGMAKGAVHQLCQSLAGKNSG--MPSGAAAIAVLPVTLDTPMNRK 189 (241)
T ss_dssp -----CTTBHHHHHHHHHHHHHHHHHTSTTSS--CCTTCEEEEEEESCEECHHHHH
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHhcc--CCCCeEEEEEecCcccCccccc
Confidence 233456999999999999777777651 0459999999999999998654
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.05 E-value=3.1e-10 Score=103.36 Aligned_cols=141 Identities=21% Similarity=0.228 Sum_probs=115.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC--CcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG--SFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASK 187 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~--~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~ 187 (313)
..+|..+.++++++++.+.+++|++|+||||||..... ...++|+.++++|+.|++.++++++|.|+++|+||++||.
T Consensus 76 ~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~ 155 (287)
T 3pxx_A 76 AEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSV 155 (287)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCH
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccc
Confidence 45688899999999999999999999999999987655 2358899999999999999999999999888999999999
Q ss_pred ccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeE
Q psy2266 188 LGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDII 267 (313)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~ 267 (313)
.+......... . + .....+..+|++||+|+..|++.++.+++++ ||+
T Consensus 156 ~~~~~~~~~~~---------~-~-------------------~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~ 202 (287)
T 3pxx_A 156 AGLIAAAQPPG---------A-G-------------------GPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQ----SIR 202 (287)
T ss_dssp HHHHHHHCCC----------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHGGG----TCE
T ss_pred hhccccccccc---------c-c-------------------ccCCCccchHHHHHHHHHHHHHHHHHHHhhc----CcE
Confidence 87642110000 0 0 0001223469999999999999999999877 999
Q ss_pred EEeecccccccccccc
Q psy2266 268 VNPVHPGYVNTDLTEH 283 (313)
Q Consensus 268 vn~v~PG~v~T~~~~~ 283 (313)
||+|+||+|+|+|.+.
T Consensus 203 vn~v~PG~v~T~~~~~ 218 (287)
T 3pxx_A 203 ANVIHPTNVNTDMLNS 218 (287)
T ss_dssp EEEEEESSBSSTTTSS
T ss_pred EEEEecCccccccccc
Confidence 9999999999999753
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.04 E-value=3.3e-10 Score=97.79 Aligned_cols=107 Identities=11% Similarity=0.126 Sum_probs=82.2
Q ss_pred EEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEe
Q psy2266 14 HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 92 (313)
Q Consensus 14 ~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~is 92 (313)
+.+|++|+++++++++.+ |++|+||||||+....++.+.+ ++|++.+++|+.+++.+++++.+.|+++++||++|
T Consensus 39 ~~~D~~~~~~~~~~~~~~----~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~s 114 (202)
T 3d7l_A 39 VTVDITNIDSIKKMYEQV----GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTT 114 (202)
T ss_dssp EECCTTCHHHHHHHHHHH----CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEEC
T ss_pred eeeecCCHHHHHHHHHHh----CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEc
Confidence 579999999998888754 8999999999987666665555 99999999999999999999999998789999999
Q ss_pred cccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHc
Q psy2266 93 SKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYN 131 (313)
Q Consensus 93 S~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 131 (313)
|..+.....+.. .....+...+.+++.+...+
T Consensus 115 S~~~~~~~~~~~-------~Y~~sK~~~~~~~~~~~~e~ 146 (202)
T 3d7l_A 115 GIMMEDPIVQGA-------SAAMANGAVTAFAKSAAIEM 146 (202)
T ss_dssp CGGGTSCCTTCH-------HHHHHHHHHHHHHHHHTTSC
T ss_pred chhhcCCCCccH-------HHHHHHHHHHHHHHHHHHHc
Confidence 987654332211 12223445566666665554
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=3.5e-10 Score=103.42 Aligned_cols=165 Identities=16% Similarity=0.129 Sum_probs=127.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++......+.....+. ....+|..+.++++++++.+.+++|++|+||||||....++
T Consensus 43 ~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~ 122 (283)
T 1g0o_A 43 REMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGH 122 (283)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence 3444333 4577877776543221110011111 12456888999999999999999999999999999987766
Q ss_pred c----chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHh
Q psy2266 149 F----GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLA 224 (313)
Q Consensus 149 ~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (313)
+ .++|+.++++|+.|++.++++++|.|+++|+||++||..+....
T Consensus 123 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------- 171 (283)
T 1g0o_A 123 VKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA------------------------------- 171 (283)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS-------------------------------
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC-------------------------------
Confidence 5 37899999999999999999999999777999999999886521
Q ss_pred hhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 225 KEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 225 ~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+...|++||+|+..|++.++.++++. ||+||+|+||+|+|++...
T Consensus 172 --------~~~~~~Y~asK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 218 (283)
T 1g0o_A 172 --------VPKHAVYSGSKGAIETFARCMAIDMADK----KITVNVVAPGGIKTDMYHA 218 (283)
T ss_dssp --------CSSCHHHHHHHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBSSHHHHH
T ss_pred --------CCCCcchHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCcccchhhhh
Confidence 1124569999999999999999998876 9999999999999998654
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.04 E-value=3.4e-10 Score=104.43 Aligned_cols=68 Identities=22% Similarity=0.196 Sum_probs=60.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CCCc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PGSF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
..+|..++++++++++.+.+++|++|+||||||... .+++ .++|+.++++|+.|++.++++++|.|++
T Consensus 105 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 177 (294)
T 3r3s_A 105 LPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK 177 (294)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT
T ss_pred EEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc
Confidence 456888999999999999999999999999999865 3444 3789999999999999999999998863
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=2.1e-10 Score=104.38 Aligned_cols=99 Identities=15% Similarity=0.154 Sum_probs=73.6
Q ss_pred HHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC---
Q psy2266 77 ILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP--- 146 (313)
Q Consensus 77 a~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~--- 146 (313)
+++..+ ++|.+|+.+++... ..+ ....+. ....+|..++++++++++.+.+++|++|+||||||....
T Consensus 23 ~~a~~l~~~G~~V~~~~r~~~-~~~-~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 100 (275)
T 2pd4_A 23 GIAQSCFNQGATLAFTYLNES-LEK-RVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEAL 100 (275)
T ss_dssp HHHHHHHTTTCEEEEEESSTT-THH-HHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGG
T ss_pred HHHHHHHHCCCEEEEEeCCHH-HHH-HHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccC
Confidence 343333 45778887776542 100 011111 224568889999999999999999999999999998754
Q ss_pred -CCc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 147 -GSF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 147 -~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
+++ .++|+.++++|+.|++.++++++|.|++
T Consensus 101 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 136 (275)
T 2pd4_A 101 EGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN 136 (275)
T ss_dssp SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 444 3789999999999999999999999963
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=2.7e-10 Score=105.21 Aligned_cols=101 Identities=12% Similarity=0.123 Sum_probs=77.1
Q ss_pred cCCceEEEEecccccccCCCc---h-hhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC----CCc----c
Q psy2266 83 RPHARVVNVASKLGMLYNVPS---Q-ELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP----GSF----G 150 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~---~-~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~----~~~----~ 150 (313)
++|.+|+.+++.......... . +......+|..++++++++++.+.+++|++|+||||||.... .++ .
T Consensus 54 ~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~ 133 (296)
T 3k31_A 54 AQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSL 133 (296)
T ss_dssp HTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCH
T ss_pred HCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCH
Confidence 457787777665322111100 0 001224678889999999999999999999999999998764 444 3
Q ss_pred hhhhhhhhcccccHHHHHHHHhhcccCCCceEE
Q psy2266 151 QRAETTLATNFFALVTVCHILFPLLRPHARVVN 183 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~ 183 (313)
++|+.++++|+.|++.++++++|.|+++|+||+
T Consensus 134 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~ 166 (296)
T 3k31_A 134 GNFLTSMHISCYSFTYIASKAEPLMTNGGSILT 166 (296)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEE
Confidence 789999999999999999999999988888886
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=3.6e-10 Score=104.32 Aligned_cols=74 Identities=11% Similarity=0.133 Sum_probs=66.6
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC----CCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCce
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA----PGSF----GQRAETTLATNFFALVTVCHILFPLLRPHARV 181 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~----~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~i 181 (313)
..+|..++++++++++.+.+++|++|+||||||... .+++ .++|+.++++|+.|++.++++++|.|+++|+|
T Consensus 86 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~I 165 (293)
T 3grk_A 86 GHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSI 165 (293)
T ss_dssp EECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEE
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEE
Confidence 467888999999999999999999999999999876 3444 37899999999999999999999999888888
Q ss_pred EE
Q psy2266 182 VN 183 (313)
Q Consensus 182 v~ 183 (313)
|+
T Consensus 166 v~ 167 (293)
T 3grk_A 166 LT 167 (293)
T ss_dssp EE
T ss_pred EE
Confidence 86
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.00 E-value=6.1e-10 Score=98.49 Aligned_cols=56 Identities=16% Similarity=0.102 Sum_probs=40.7
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHH
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHIL 78 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~ 78 (313)
.+.++.+|++|.++++++++ ++|+||||||.... ...++..+++|+.++..+++++
T Consensus 64 ~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~ag~~~~------~~~~~~~~~~n~~~~~~~~~~~ 119 (242)
T 2bka_A 64 NVNQEVVDFEKLDDYASAFQ-------GHDVGFCCLGTTRG------KAGAEGFVRVDRDYVLKSAELA 119 (242)
T ss_dssp GCEEEECCGGGGGGGGGGGS-------SCSEEEECCCCCHH------HHHHHHHHHHHTHHHHHHHHHH
T ss_pred CceEEecCcCCHHHHHHHhc-------CCCEEEECCCcccc------cCCcccceeeeHHHHHHHHHHH
Confidence 46788999999888776553 79999999997431 1345667777777776666653
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.00 E-value=6.6e-10 Score=99.89 Aligned_cols=175 Identities=8% Similarity=0.001 Sum_probs=134.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC-c----
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS-F---- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~-~---- 149 (313)
++++..+ ++|.+|+.+++....... ....+|..+.++++++++.+.+++|++|+||||||....++ +
T Consensus 36 ~~la~~l~~~G~~V~~~~r~~~~~~~-------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~ 108 (251)
T 3orf_A 36 AEVVKFFKSKSWNTISIDFRENPNAD-------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEF 108 (251)
T ss_dssp HHHHHHHHHTTCEEEEEESSCCTTSS-------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTH
T ss_pred HHHHHHHHHCCCEEEEEeCCcccccc-------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccC
Confidence 4444433 457788887765543321 23556788999999999999999999999999999876554 2
Q ss_pred chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhccc
Q psy2266 150 GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKD 229 (313)
Q Consensus 150 ~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (313)
.++|+.++++|+.|++.++++++|.|+++|+||++||..+...
T Consensus 109 ~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------------------------------- 151 (251)
T 3orf_A 109 LKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR------------------------------------- 151 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-------------------------------------
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC-------------------------------------
Confidence 4789999999999999999999999988899999999998652
Q ss_pred ccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccC-------CCCcchhhhhhhhh
Q psy2266 230 KEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG-------VLTPEQGKIRQKIY 299 (313)
Q Consensus 230 ~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~~ 299 (313)
..+...|++||+|+..+++.++.+++ +.++||+||+|+||+|+|++.+... ..++++.+....++
T Consensus 152 ---~~~~~~Y~~sKaa~~~~~~~la~e~~--~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~dva~~i~~l 223 (251)
T 3orf_A 152 ---TSGMIAYGATKAATHHIIKDLASENG--GLPAGSTSLGILPVTLDTPTNRKYMSDANFDDWTPLSEVAEKLFEW 223 (251)
T ss_dssp ---CTTBHHHHHHHHHHHHHHHHHTSTTS--SSCTTCEEEEEEESCBCCHHHHHHCTTSCGGGSBCHHHHHHHHHHH
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHhc--ccCCCcEEEEEecCcCcCcchhhhcccccccccCCHHHHHHHHHHH
Confidence 23345699999999999987777764 1145999999999999999875432 23455555554443
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.99 E-value=5.6e-10 Score=99.11 Aligned_cols=161 Identities=13% Similarity=0.083 Sum_probs=126.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHc--CCccEEEeccCcCCCCCc---
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYN--GPLDKILDTAMDTAPGSF--- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--G~lD~Linna~~~~~~~~--- 149 (313)
++++..+ ++|.+|+.+++....... ......+|..++++++++++.+.+.+ |++|+||||||....+++
T Consensus 17 ~~~a~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~ 91 (236)
T 1ooe_A 17 SAILEFFKKNGYTVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSK 91 (236)
T ss_dssp HHHHHHHHHTTEEEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTST
T ss_pred HHHHHHHHHCCCEEEEEecCcccccc-----ccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCccc
Confidence 3444434 456778877765443221 11234567789999999999999999 899999999998765554
Q ss_pred --chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhc
Q psy2266 150 --GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEG 227 (313)
Q Consensus 150 --~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (313)
.++|+.++++|+.|++.+++.++|.|+++|+||++||..+...
T Consensus 92 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------------------------------- 136 (236)
T 1ooe_A 92 DFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP----------------------------------- 136 (236)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------------------------------
T ss_pred CCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC-----------------------------------
Confidence 3789999999999999999999999988899999999988651
Q ss_pred ccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 228 KDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 228 ~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+...|++||+++..|++.++.+++. .++||+||+|+||+|+|++.+.
T Consensus 137 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~--~~~gi~v~~v~Pg~v~t~~~~~ 185 (236)
T 1ooe_A 137 -----TPSMIGYGMAKAAVHHLTSSLAAKDSG--LPDNSAVLTIMPVTLDTPMNRK 185 (236)
T ss_dssp -----CTTBHHHHHHHHHHHHHHHHHHSTTSS--CCTTCEEEEEEESCBCCHHHHH
T ss_pred -----CCCcHHHHHHHHHHHHHHHHHHHHhcc--cCCCeEEEEEecCcccCcchhh
Confidence 233456999999999999888887751 1449999999999999998654
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=2.6e-10 Score=103.15 Aligned_cols=155 Identities=10% Similarity=0.063 Sum_probs=123.9
Q ss_pred cCCceEEEEecccccccCCCchhh------hhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC----CCc---
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL------RQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP----GSF--- 149 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~----~~~--- 149 (313)
++|.+|+.+++.. ...+. ...+ .....+|..++++++++++.+.+++|++|+||||||.... +++
T Consensus 33 ~~G~~V~~~~r~~-~~~~~-~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~ 110 (265)
T 1qsg_A 33 REGAELAFTYQND-KLKGR-VEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNA 110 (265)
T ss_dssp HTTCEEEEEESST-TTHHH-HHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHH
T ss_pred HCCCEEEEEcCcH-HHHHH-HHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCcccc
Confidence 4577888776654 11000 1111 1234568889999999999999999999999999998753 333
Q ss_pred --chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhc
Q psy2266 150 --GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEG 227 (313)
Q Consensus 150 --~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (313)
.++|+.++++|+.|++.++++++|.|+++|+||++||..+...
T Consensus 111 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------------------------------- 155 (265)
T 1qsg_A 111 VTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA----------------------------------- 155 (265)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------------------------------
T ss_pred CCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC-----------------------------------
Confidence 3689999999999999999999999987899999999887652
Q ss_pred ccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 228 KDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 228 ~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
..+...|++||+|+..+++.++.++++. ||+||+|+||+|+|++.+.
T Consensus 156 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~PG~v~t~~~~~ 202 (265)
T 1qsg_A 156 -----IPNYNVMGLAKASLEANVRYMANAMGPE----GVRVNAISAGPIRTLAASG 202 (265)
T ss_dssp -----CTTTTHHHHHHHHHHHHHHHHHHHHTTT----TEEEEEEEECCCCCTTGGG
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHhhhc----CeEEEEEEeCCCccchhhc
Confidence 2234569999999999999999988765 9999999999999998764
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=3.3e-09 Score=99.14 Aligned_cols=79 Identities=14% Similarity=0.172 Sum_probs=63.7
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC--
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP-- 84 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~-- 84 (313)
+.++.++.+|++|.+++.++++. +++|+||||||.... +.. ++++..+++|+.+++.+++++.+.|+.
T Consensus 49 ~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~ 119 (361)
T 1kew_A 49 SNRYNFEHADICDSAEITRIFEQ-----YQPDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALG 119 (361)
T ss_dssp CTTEEEEECCTTCHHHHHHHHHH-----HCCSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred CCCeEEEECCCCCHHHHHHHHhh-----cCCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcc
Confidence 34678899999999998887764 379999999997541 222 677889999999999999999998743
Q ss_pred -----CceEEEEeccc
Q psy2266 85 -----HARVVNVASKL 95 (313)
Q Consensus 85 -----~g~IV~isS~~ 95 (313)
++++|++||..
T Consensus 120 ~~~~~~~~iv~~SS~~ 135 (361)
T 1kew_A 120 EDKKNNFRFHHISTDE 135 (361)
T ss_dssp HHHHHHCEEEEEEEGG
T ss_pred cccccCceEEEeCCHH
Confidence 25899998864
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.97 E-value=5.3e-10 Score=101.42 Aligned_cols=155 Identities=14% Similarity=0.126 Sum_probs=123.1
Q ss_pred cCCceEEEEecccccc-cCCCchhh--h-hhhcccCCCHHHHHHHHHHHHHHcC---CccEEEeccCcCC-----CCCc-
Q psy2266 83 RPHARVVNVASKLGML-YNVPSQEL--R-QTLFNESLTEDQLLDMMTDYVQYNG---PLDKILDTAMDTA-----PGSF- 149 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~-~~~~~~~~--~-~~~~~d~~~~~~~~~~~~~~~~~~G---~lD~Linna~~~~-----~~~~- 149 (313)
++|.+|+.+++..... .+. ...+ + ....+|..++++++++++.+.+++| ++|+||||||... .+++
T Consensus 31 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~ 109 (269)
T 2h7i_A 31 EQGAQLVLTGFDRLRLIQRI-TDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFF 109 (269)
T ss_dssp HTTCEEEEEECSCHHHHHHH-HTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGG
T ss_pred HCCCEEEEEecChHHHHHHH-HHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccc
Confidence 4577888776543221 111 0011 1 2245788899999999999999999 9999999999875 3454
Q ss_pred ---chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhh
Q psy2266 150 ---GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKE 226 (313)
Q Consensus 150 ---~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (313)
.++|+.++++|+.|++.++++++|.|+++|+||++||..+.-
T Consensus 110 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~----------------------------------- 154 (269)
T 2h7i_A 110 DAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA----------------------------------- 154 (269)
T ss_dssp GCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC-----------------------------------
T ss_pred cCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc-----------------------------------
Confidence 378999999999999999999999998889999999987521
Q ss_pred cccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 227 GKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 227 ~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
......|++||+|+..|++.++.+++++ ||+||+|+||+|+|++.+.
T Consensus 155 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~----gi~vn~v~PG~v~T~~~~~ 201 (269)
T 2h7i_A 155 ------MPAYNWMTVAKSALESVNRFVAREAGKY----GVRSNLVAAGPIRTLAMSA 201 (269)
T ss_dssp ------CTTTHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCCCCHHHHH
T ss_pred ------cCchHHHHHHHHHHHHHHHHHHHHhccc----CcEEEEEecCcccchhhhc
Confidence 2233469999999999999999998866 9999999999999998654
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=98.97 E-value=4.4e-10 Score=105.26 Aligned_cols=62 Identities=11% Similarity=0.275 Sum_probs=53.5
Q ss_pred CCCHHHHHHHHHHHHHHcCCccEEEeccCcC--CCCCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 114 SLTEDQLLDMMTDYVQYNGPLDKILDTAMDT--APGSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~G~lD~Linna~~~--~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..|.++++++++.+.+++|++|+||||||.. ..+++ .++|+.+|++|+.|++.++++++|.|
T Consensus 94 lsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 94 MLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp TCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred ccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3344499999999999999999999999974 34554 37899999999999999999999977
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=3.2e-10 Score=102.43 Aligned_cols=92 Identities=20% Similarity=0.205 Sum_probs=70.1
Q ss_pred cCCceEEEEecccccccCCCchhh------hhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC----CCc---
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL------RQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP----GSF--- 149 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~----~~~--- 149 (313)
++|.+|+.+++... ..+ ....+ .....+|..++++++++++.+.+++|++|+||||||.... +++
T Consensus 32 ~~G~~V~~~~r~~~-~~~-~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~ 109 (261)
T 2wyu_A 32 EAGAEVALSYQAER-LRP-EAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDT 109 (261)
T ss_dssp HHTCEEEEEESCGG-GHH-HHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGC
T ss_pred HCCCEEEEEcCCHH-HHH-HHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccC
Confidence 44778887766442 000 01111 1224568889999999999999999999999999998753 444
Q ss_pred -chhhhhhhhcccccHHHHHHHHhhccc
Q psy2266 150 -GQRAETTLATNFFALVTVCHILFPLLR 176 (313)
Q Consensus 150 -~~~~~~~~~~N~~g~~~~~~~~~p~l~ 176 (313)
.++|+.++++|+.|++.++++++|.|+
T Consensus 110 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 137 (261)
T 2wyu_A 110 RRQDWLLALEVSAYSLVAVARRAEPLLR 137 (261)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHTTTEE
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 378999999999999999999999886
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=3.3e-09 Score=99.78 Aligned_cols=62 Identities=16% Similarity=0.215 Sum_probs=42.4
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
.++.++.+|++|.+++.++++ ++|+||||||..... .........+++|+.++..+++++.+
T Consensus 70 ~~v~~~~~Dl~d~~~l~~~~~-------~~D~Vih~Aa~~~~~---~~~~~~~~~~~~Nv~gt~~l~~aa~~ 131 (344)
T 2gn4_A 70 PRMRFFIGDVRDLERLNYALE-------GVDICIHAAALKHVP---IAEYNPLECIKTNIMGASNVINACLK 131 (344)
T ss_dssp TTEEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCCHH---HHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHh-------cCCEEEECCCCCCCC---chhcCHHHHHHHHHHHHHHHHHHHHh
Confidence 467889999999988777653 699999999975411 11133455666666666666665544
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=98.94 E-value=3.3e-09 Score=97.52 Aligned_cols=154 Identities=14% Similarity=0.077 Sum_probs=105.5
Q ss_pred cCCceEEEEecccccccCCCchhhhh-hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQ-TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
+++..|+.+++.... .. ++. ...+|..+.++++++++. +++|+++||||........++++..+++|+
T Consensus 34 ~~G~~V~~~~r~~~~-~~-----l~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv 102 (321)
T 2pk3_A 34 EQNVEVFGTSRNNEA-KL-----PNVEMISLDIMDSQRVKKVISD-----IKPDYIFHLAAKSSVKDSWLNKKGTFSTNV 102 (321)
T ss_dssp HTTCEEEEEESCTTC-CC-----TTEEEEECCTTCHHHHHHHHHH-----HCCSEEEECCSCCCHHHHTTCHHHHHHHHH
T ss_pred HCCCEEEEEecCCcc-cc-----ceeeEEECCCCCHHHHHHHHHh-----cCCCEEEEcCcccchhhhhhcHHHHHHHHH
Confidence 356788877765433 11 122 235677788888777665 679999999997653333457889999999
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
.|+..+++++ +.+.+.++||++||........+.. ...+++ ....+...|+.
T Consensus 103 ~g~~~l~~a~-~~~~~~~~iv~~SS~~v~g~~~~~~--------~~~~E~-------------------~~~~~~~~Y~~ 154 (321)
T 2pk3_A 103 FGTLHVLDAV-RDSNLDCRILTIGSSEEYGMILPEE--------SPVSEE-------------------NQLRPMSPYGV 154 (321)
T ss_dssp HHHHHHHHHH-HHHTCCCEEEEEEEGGGTBSCCGGG--------CSBCTT-------------------SCCBCCSHHHH
T ss_pred HHHHHHHHHH-HHhCCCCeEEEEccHHhcCCCCCCC--------CCCCCC-------------------CCCCCCCccHH
Confidence 9999999999 7665468999999987543110000 000000 01223456999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
||.+...+++.++.+ +||+++.+.||.|.+|...
T Consensus 155 sK~~~E~~~~~~~~~-------~gi~~~ilrp~~v~g~~~~ 188 (321)
T 2pk3_A 155 SKASVGMLARQYVKA-------YGMDIIHTRTFNHIGPGQS 188 (321)
T ss_dssp HHHHHHHHHHHHHHH-------HCCEEEEEEECEEECTTCC
T ss_pred HHHHHHHHHHHHHHH-------cCCCEEEEEeCcccCcCCC
Confidence 999999999776654 2799999999999888643
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.93 E-value=7.6e-09 Score=95.68 Aligned_cols=76 Identities=20% Similarity=0.185 Sum_probs=59.4
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.++.+|++|.+++++++ +++|+||||||.... +.. ++++..+++|+.++..+++++.+. ...+
T Consensus 53 ~~~~~~~~~Dl~d~~~~~~~~-------~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~ 120 (336)
T 2hun_A 53 DPRYTFVKGDVADYELVKELV-------RKVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE-NPEV 120 (336)
T ss_dssp CTTEEEEECCTTCHHHHHHHH-------HTCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH-CTTS
T ss_pred CCceEEEEcCCCCHHHHHHHh-------hCCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCc
Confidence 346788999999998888776 479999999997541 122 677889999999999999998876 2236
Q ss_pred eEEEEeccc
Q psy2266 87 RVVNVASKL 95 (313)
Q Consensus 87 ~IV~isS~~ 95 (313)
++|++||..
T Consensus 121 ~iv~~SS~~ 129 (336)
T 2hun_A 121 RFVHVSTDE 129 (336)
T ss_dssp EEEEEEEGG
T ss_pred EEEEeccHH
Confidence 788777754
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=9.2e-09 Score=96.19 Aligned_cols=78 Identities=17% Similarity=0.135 Sum_probs=59.7
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.++.+|++|.+++.++++.+ ++|+||||||... .... ++++..+++|+.++..+++++.+. ...+
T Consensus 56 ~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~ 125 (357)
T 1rkx_A 56 ADGMQSEIGDIRDQNKLLESIREF-----QPEIVFHMAAQPL----VRLSYSEPVETYSTNVMGTVYLLEAIRHV-GGVK 125 (357)
T ss_dssp TTTSEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH-CCCC
T ss_pred CCceEEEEccccCHHHHHHHHHhc-----CCCEEEECCCCcc----cccchhCHHHHHHHHHHHHHHHHHHHHHh-CCCC
Confidence 446788999999999988887765 6999999999632 1222 678899999999999999988763 2245
Q ss_pred eEEEEeccc
Q psy2266 87 RVVNVASKL 95 (313)
Q Consensus 87 ~IV~isS~~ 95 (313)
++|++||..
T Consensus 126 ~~v~~SS~~ 134 (357)
T 1rkx_A 126 AVVNITSDK 134 (357)
T ss_dssp EEEEECCGG
T ss_pred eEEEecCHH
Confidence 677766643
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=1e-09 Score=99.12 Aligned_cols=68 Identities=10% Similarity=0.125 Sum_probs=60.5
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC----CCCc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA----PGSF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~----~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
..+|..++++++++++.+.+++|++|+|+||||... ..++ .++|+.++++|+.|++.+++.++|.|++
T Consensus 64 ~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 139 (266)
T 3oig_A 64 LPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE 139 (266)
T ss_dssp EECCCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT
T ss_pred EeCCCCCHHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC
Confidence 457888999999999999999999999999999876 3443 3689999999999999999999999975
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.90 E-value=1.1e-08 Score=94.67 Aligned_cols=77 Identities=12% Similarity=0.061 Sum_probs=62.7
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.++.+|++|.++++++++. +++|+||||||.... ... ++++..+++|+.++..+++++.+.+.+ +++
T Consensus 51 ~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~-~~i 120 (347)
T 1orr_A 51 NFEFVHGDIRNKNDVTRLITK-----YMPDSCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNSN-CNI 120 (347)
T ss_dssp CCEEEECCTTCHHHHHHHHHH-----HCCSEEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT-CEE
T ss_pred ceEEEEcCCCCHHHHHHHHhc-----cCCCEEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-ceE
Confidence 578899999999998888765 279999999997532 122 678889999999999999999887643 689
Q ss_pred EEEecccc
Q psy2266 89 VNVASKLG 96 (313)
Q Consensus 89 V~isS~~~ 96 (313)
|++||...
T Consensus 121 v~~SS~~v 128 (347)
T 1orr_A 121 IYSSTNKV 128 (347)
T ss_dssp EEEEEGGG
T ss_pred EEeccHHH
Confidence 99999653
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.1e-09 Score=99.48 Aligned_cols=98 Identities=7% Similarity=0.027 Sum_probs=76.5
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc---
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG--- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~--- 150 (313)
++++..+ ++|.+|+.+........+......+ ....+|..++++++++++.+.++||++|+||||||....+++.
T Consensus 16 ~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~ 95 (247)
T 3ged_A 16 KQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLL 95 (247)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCC
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCC
Confidence 4444433 5688888887655443322211111 2356788899999999999999999999999999999888874
Q ss_pred -hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 -QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 -~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++|++++++|+.|+|+++++++|
T Consensus 96 ~e~~~~~~~vNl~g~~~~~~~~~~ 119 (247)
T 3ged_A 96 YEEFDYILSVGLKAPYELSRLCRD 119 (247)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 78999999999999999999998
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=1.2e-08 Score=96.66 Aligned_cols=82 Identities=13% Similarity=0.035 Sum_probs=58.5
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
+.++.++.+|++|.+++.++++.+ ++|+||||||...........+.|...+++|+.++..+++++.+.- .+.+
T Consensus 76 ~~~v~~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~ 149 (404)
T 1i24_A 76 GKSIELYVGDICDFEFLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECH 149 (404)
T ss_dssp CCCCEEEESCTTSHHHHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCE
T ss_pred CCceEEEECCCCCHHHHHHHHhcc-----CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcE
Confidence 446788999999999988877654 6999999999754221122235677788999999998888876531 1136
Q ss_pred EEEEeccc
Q psy2266 88 VVNVASKL 95 (313)
Q Consensus 88 IV~isS~~ 95 (313)
+|++||..
T Consensus 150 ~V~~SS~~ 157 (404)
T 1i24_A 150 LVKLGTMG 157 (404)
T ss_dssp EEEECCGG
T ss_pred EEEeCcHH
Confidence 77777643
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.6e-09 Score=95.84 Aligned_cols=143 Identities=13% Similarity=0.092 Sum_probs=95.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhh-hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhh
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQ-TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRA 153 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~ 153 (313)
++++..+ +++..|+.+++........... +. .....++. +.+.+.++++|+++||||.... ++|
T Consensus 35 ~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~--~~~~~~~~Dl~--------~~~~~~~~~~D~vi~~ag~~~~----~~~ 100 (236)
T 3e8x_A 35 RYLLSELKNKGHEPVAMVRNEEQGPELRER--GASDIVVANLE--------EDFSHAFASIDAVVFAAGSGPH----TGA 100 (236)
T ss_dssp HHHHHHHHHTTCEEEEEESSGGGHHHHHHT--TCSEEEECCTT--------SCCGGGGTTCSEEEECCCCCTT----SCH
T ss_pred HHHHHHHHhCCCeEEEEECChHHHHHHHhC--CCceEEEcccH--------HHHHHHHcCCCEEEECCCCCCC----CCc
Confidence 3344333 4567888887755443221111 11 22222333 4556678899999999997642 578
Q ss_pred hhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCC
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAG 233 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (313)
+..+++|+.|+..+++++.. ...++||++||..+.... . ..
T Consensus 101 ~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~~~~~~-----------------------------------~--~~ 141 (236)
T 3e8x_A 101 DKTILIDLWGAIKTIQEAEK--RGIKRFIMVSSVGTVDPD-----------------------------------Q--GP 141 (236)
T ss_dssp HHHHHTTTHHHHHHHHHHHH--HTCCEEEEECCTTCSCGG-----------------------------------G--SC
T ss_pred cccchhhHHHHHHHHHHHHH--cCCCEEEEEecCCCCCCC-----------------------------------C--Ch
Confidence 89999999999999998844 234799999996654310 0 00
Q ss_pred CCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 234 WPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 234 ~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
.+...|+.+|.++..+++ . .||+++.|.||++.|+...
T Consensus 142 ~~~~~Y~~sK~~~e~~~~-------~----~gi~~~~lrpg~v~~~~~~ 179 (236)
T 3e8x_A 142 MNMRHYLVAKRLADDELK-------R----SSLDYTIVRPGPLSNEEST 179 (236)
T ss_dssp GGGHHHHHHHHHHHHHHH-------H----SSSEEEEEEECSEECSCCC
T ss_pred hhhhhHHHHHHHHHHHHH-------H----CCCCEEEEeCCcccCCCCC
Confidence 133469999999998873 2 3899999999999998753
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=5.3e-09 Score=96.71 Aligned_cols=162 Identities=14% Similarity=0.098 Sum_probs=105.2
Q ss_pred cCCceEEEEecccccccCCCchhh----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTL 157 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~ 157 (313)
++|..|+.+++............+ + ....+|..+.+++.++++.+ ++|+++||||........++++..+
T Consensus 25 ~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~~~~~~~~~~~~ 99 (345)
T 2z1m_A 25 EKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----QPDEVYNLAAQSFVGVSFEQPILTA 99 (345)
T ss_dssp HTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHHHHTTSHHHHH
T ss_pred HCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-----CCCEEEECCCCcchhhhhhCHHHHH
Confidence 456788777665432211000000 1 12456777888888877765 7999999999764322346788999
Q ss_pred hcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCC
Q psy2266 158 ATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEF 237 (313)
Q Consensus 158 ~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
++|+.|+..+++++.. +...++||++||....-... .. ..++ .....+..
T Consensus 100 ~~Nv~g~~~l~~a~~~-~~~~~~iv~~SS~~vyg~~~-~~---------~~~e-------------------~~~~~~~~ 149 (345)
T 2z1m_A 100 EVDAIGVLRILEALRT-VKPDTKFYQASTSEMFGKVQ-EI---------PQTE-------------------KTPFYPRS 149 (345)
T ss_dssp HHHTHHHHHHHHHHHH-HCTTCEEEEEEEGGGGCSCS-SS---------SBCT-------------------TSCCCCCS
T ss_pred HHHHHHHHHHHHHHHH-hCCCceEEEEechhhcCCCC-CC---------CCCc-------------------cCCCCCCC
Confidence 9999999999999985 32247999999986532110 00 0000 01123445
Q ss_pred chhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 238 SYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 238 ~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
.|+.||.+...+++.++.++.-.. ..+++++.+.||.+.|.+
T Consensus 150 ~Y~~sK~~~e~~~~~~~~~~~~~~-~~~r~~~~~gpg~~~~~~ 191 (345)
T 2z1m_A 150 PYAVAKLFGHWITVNYREAYNMFA-CSGILFNHESPLRGIEFV 191 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCE-EEEEECCEECTTSCTTSH
T ss_pred hhHHHHHHHHHHHHHHHHHhCCce-EeeeeeeecCCCCCCcch
Confidence 699999999999988887764211 126788899999888765
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=1.1e-09 Score=98.03 Aligned_cols=75 Identities=19% Similarity=0.244 Sum_probs=62.4
Q ss_pred EEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccC--CceEEEE
Q psy2266 14 HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP--HARVVNV 91 (313)
Q Consensus 14 ~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~--~g~IV~i 91 (313)
+++|++|.++++++++.+ +|+||+||||||+.... +.|++++++|+.+++.+++++.|.|++ .++||++
T Consensus 42 ~~~Dl~~~~~v~~~~~~~---~~~id~lv~~Ag~~~~~------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~i 112 (257)
T 1fjh_A 42 LSTAEGRKQAIADVLAKC---SKGMDGLVLCAGLGPQT------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVI 112 (257)
T ss_dssp TTSHHHHHHHHHHHHTTC---TTCCSEEEECCCCCTTC------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEE
T ss_pred cccCCCCHHHHHHHHHHh---CCCCCEEEECCCCCCCc------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEE
Confidence 357898888888777632 38999999999986521 238999999999999999999999965 3899999
Q ss_pred eccccc
Q psy2266 92 ASKLGM 97 (313)
Q Consensus 92 sS~~~~ 97 (313)
||..+.
T Consensus 113 sS~~~~ 118 (257)
T 1fjh_A 113 SSVASA 118 (257)
T ss_dssp CCGGGG
T ss_pred CChhhh
Confidence 999887
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=98.83 E-value=2.7e-09 Score=97.20 Aligned_cols=97 Identities=15% Similarity=0.145 Sum_probs=74.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PG 147 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~ 147 (313)
++++..+ ++|.+|+.+......+.+. .+++. ....+|..++++++++++.+.++||++|+||||||... .+
T Consensus 21 ~aiA~~la~~Ga~Vv~~~~~~~~~~~~-~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~ 99 (254)
T 4fn4_A 21 RAIAKKFALNDSIVVAVELLEDRLNQI-VQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVT 99 (254)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTC
T ss_pred HHHHHHHHHcCCEEEEEECCHHHHHHH-HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCC
Confidence 3444333 5678888877665444332 22222 12467888999999999999999999999999999864 46
Q ss_pred Ccc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 148 SFG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 148 ~~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
|+. ++|++++++|+.|+|+++|+++|
T Consensus 100 ~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p 129 (254)
T 4fn4_A 100 PVAEVSDELWERVLAVNLYSAFYSSRAVIP 129 (254)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 663 78999999999999999999999
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.83 E-value=2.6e-09 Score=97.34 Aligned_cols=105 Identities=11% Similarity=0.003 Sum_probs=81.7
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+........+.+. .+++. ....+|..++++++++++.+.++||++|+||||||....++
T Consensus 23 ~aia~~la~~Ga~Vvi~~~~~~~~~~~-~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~ 101 (255)
T 4g81_D 23 FAYAEGLAAAGARVILNDIRATLLAES-VDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKP 101 (255)
T ss_dssp HHHHHHHHHTTCEEEECCSCHHHHHHH-HHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHH-HHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCC
Confidence 3444433 5677888776655443332 12221 12467888999999999999999999999999999998888
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhhcccCCCce
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFPLLRPHARV 181 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~i 181 (313)
+. ++|++++++|+.|+|+++|+++|.|++++.-
T Consensus 102 ~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~ 138 (255)
T 4g81_D 102 MVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSG 138 (255)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCC
Confidence 74 7999999999999999999999999875543
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=2.1e-08 Score=94.99 Aligned_cols=76 Identities=9% Similarity=0.151 Sum_probs=57.2
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVN 90 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~ 90 (313)
+.++.+|++|.+++.++++ .++++|+||||||..... ...++++..+++|+.+++.+++++... ..+++|+
T Consensus 71 ~~~~~~Dl~d~~~~~~~~~----~~~~~d~vih~A~~~~~~---~~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~iv~ 141 (397)
T 1gy8_A 71 AALEVGDVRNEDFLNGVFT----RHGPIDAVVHMCAFLAVG---ESVRDPLKYYDNNVVGILRLLQAMLLH--KCDKIIF 141 (397)
T ss_dssp CEEEESCTTCHHHHHHHHH----HSCCCCEEEECCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEE
T ss_pred EEEEECCCCCHHHHHHHHH----hcCCCCEEEECCCccCcC---cchhhHHHHHHHHhHHHHHHHHHHHHh--CCCEEEE
Confidence 7889999999998877665 367799999999976421 122667888999999999998876432 2357777
Q ss_pred Eeccc
Q psy2266 91 VASKL 95 (313)
Q Consensus 91 isS~~ 95 (313)
+||..
T Consensus 142 ~SS~~ 146 (397)
T 1gy8_A 142 SSSAA 146 (397)
T ss_dssp EEEGG
T ss_pred ECCHH
Confidence 77744
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=1.5e-09 Score=99.65 Aligned_cols=123 Identities=10% Similarity=0.112 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHHcCCccEEEeccCcCC--CCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccc
Q psy2266 117 EDQLLDMMTDYVQYNGPLDKILDTAMDTA--PGSF----GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM 190 (313)
Q Consensus 117 ~~~~~~~~~~~~~~~G~lD~Linna~~~~--~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~ 190 (313)
+++++++++.+.+++|++|+||||||... .+++ .++|+.++++|+.|++.++++++|.|+++|+||++||..+.
T Consensus 103 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~ 182 (297)
T 1d7o_A 103 NWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASE 182 (297)
T ss_dssp CCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccc
Confidence 55789999999999999999999999643 4444 37899999999999999999999999888999999999886
Q ss_pred cccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCC-CchhhhHHHHHHHHHHHHhhhcc-CCCCCCeEE
Q psy2266 191 LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPE-FSYSVSKLGVAKLSFIQHATLSK-DKRRPDIIV 268 (313)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~al~~l~~~~~~~l~~-~~~~~gI~v 268 (313)
.. ..+. .+|++||+|+..|++.++.++++ . ||+|
T Consensus 183 ~~----------------------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~~----gi~v 218 (297)
T 1d7o_A 183 RI----------------------------------------IPGYGGGMSSAKAALESDTRVLAFEAGRKQ----NIRV 218 (297)
T ss_dssp SC----------------------------------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHH----CCEE
T ss_pred cC----------------------------------------CCCcchHHHHHHHHHHHHHHHHHHHhCccc----CcEE
Confidence 51 1222 36999999999999999999874 5 9999
Q ss_pred Eeecccccccccccc
Q psy2266 269 NPVHPGYVNTDLTEH 283 (313)
Q Consensus 269 n~v~PG~v~T~~~~~ 283 (313)
|+|+||+|+|++.+.
T Consensus 219 n~v~PG~v~T~~~~~ 233 (297)
T 1d7o_A 219 NTISAGPLGSRAAKA 233 (297)
T ss_dssp EEEEECCCBCCCSSC
T ss_pred EEEeccccccchhhh
Confidence 999999999999764
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.80 E-value=2.4e-08 Score=92.44 Aligned_cols=78 Identities=14% Similarity=0.192 Sum_probs=54.3
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
+.++.++.+|++|.++++++++. +++|+||||||+.... ...+.....+++|+.+++.+++++... ..++
T Consensus 54 ~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~ 123 (341)
T 3enk_A 54 GKTPAFHETDVSDERALARIFDA-----HPITAAIHFAALKAVG---ESVAKPIEYYRNNLDSLLSLLRVMRER--AVKR 123 (341)
T ss_dssp SCCCEEECCCTTCHHHHHHHHHH-----SCCCEEEECCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCE
T ss_pred CCCceEEEeecCCHHHHHHHHhc-----cCCcEEEECccccccC---ccccChHHHHHHHHHHHHHHHHHHHhC--CCCE
Confidence 45678899999999999888765 5899999999986422 112444567778888888777764331 2246
Q ss_pred EEEEeccc
Q psy2266 88 VVNVASKL 95 (313)
Q Consensus 88 IV~isS~~ 95 (313)
+|++||..
T Consensus 124 iv~~SS~~ 131 (341)
T 3enk_A 124 IVFSSSAT 131 (341)
T ss_dssp EEEEEEGG
T ss_pred EEEEecce
Confidence 66666643
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.78 E-value=6.5e-09 Score=93.54 Aligned_cols=130 Identities=15% Similarity=0.099 Sum_probs=113.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCceEEec
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 185 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vs 185 (313)
..+|..++++++++++.+.+++|++|+++||||....+++ .++|+.++++|+.|++.++++++|.|+++++||++|
T Consensus 76 ~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~s 155 (274)
T 1ja9_A 76 IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS 155 (274)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEc
Confidence 4568889999999999999999999999999998876654 368899999999999999999999998669999999
Q ss_pred CCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCC
Q psy2266 186 SKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPD 265 (313)
Q Consensus 186 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~g 265 (313)
|..+... +..+...|++||+++..+++.++.++... |
T Consensus 156 S~~~~~~---------------------------------------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~----g 192 (274)
T 1ja9_A 156 SIAAVMT---------------------------------------GIPNHALYAGSKAAVEGFCRAFAVDCGAK----G 192 (274)
T ss_dssp CGGGTCC---------------------------------------SCCSCHHHHHHHHHHHHHHHHHHHHHGGG----T
T ss_pred ChHhccC---------------------------------------CCCCCchHHHHHHHHHHHHHHHHHHhhhc----C
Confidence 9987621 12233569999999999999999998766 9
Q ss_pred eEEEeeccccccccccc
Q psy2266 266 IIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 266 I~vn~v~PG~v~T~~~~ 282 (313)
|++++|+||++.|++..
T Consensus 193 i~v~~v~Pg~v~t~~~~ 209 (274)
T 1ja9_A 193 VTVNCIAPGGVKTDMFD 209 (274)
T ss_dssp CEEEEEEECCBSSHHHH
T ss_pred eEEEEEeeCcccccchh
Confidence 99999999999999865
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=2.7e-09 Score=99.12 Aligned_cols=123 Identities=9% Similarity=0.051 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHcCCccEEEeccCcCC--CCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccc
Q psy2266 117 EDQLLDMMTDYVQYNGPLDKILDTAMDTA--PGSF----GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM 190 (313)
Q Consensus 117 ~~~~~~~~~~~~~~~G~lD~Linna~~~~--~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~ 190 (313)
+++++++++.+.+++|++|+||||||... .+++ .++|+.++++|+.|++.++++++|.|+++|+||++||.++.
T Consensus 104 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~ 183 (315)
T 2o2s_A 104 GYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAE 183 (315)
T ss_dssp CCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGT
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 56899999999999999999999999753 4454 37899999999999999999999999888999999999886
Q ss_pred cccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCC-CchhhhHHHHHHHHHHHHhhhcc-CCCCCCeEE
Q psy2266 191 LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPE-FSYSVSKLGVAKLSFIQHATLSK-DKRRPDIIV 268 (313)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~al~~l~~~~~~~l~~-~~~~~gI~v 268 (313)
.. ..+. ..|++||+|+..|++.++.++++ . ||+|
T Consensus 184 ~~----------------------------------------~~~~~~~Y~asKaal~~l~~~la~el~~~~----gIrv 219 (315)
T 2o2s_A 184 RV----------------------------------------VPGYGGGMSSAKAALESDTRTLAWEAGQKY----GVRV 219 (315)
T ss_dssp SC----------------------------------------CTTCCTTHHHHHHHHHHHHHHHHHHHHHHT----CCEE
T ss_pred cc----------------------------------------CCCccHHHHHHHHHHHHHHHHHHHHhCccc----CeEE
Confidence 52 1222 36999999999999999999874 5 9999
Q ss_pred Eeecccccccccccc
Q psy2266 269 NPVHPGYVNTDLTEH 283 (313)
Q Consensus 269 n~v~PG~v~T~~~~~ 283 (313)
|+|+||+|+|+|...
T Consensus 220 n~v~PG~v~T~~~~~ 234 (315)
T 2o2s_A 220 NAISAGPLKSRAASA 234 (315)
T ss_dssp EEEEECCCCCHHHHH
T ss_pred EEEecccccchhhhh
Confidence 999999999998665
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=4.8e-08 Score=90.64 Aligned_cols=74 Identities=18% Similarity=0.205 Sum_probs=54.2
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.++.++.+|++|.++++++++.+ ++|+||||||..... ..++++ +++|+.+++.+++++... ..+++
T Consensus 65 ~~v~~~~~Dl~d~~~~~~~~~~~-----~~D~vih~A~~~~~~----~~~~~~--~~~N~~~~~~l~~a~~~~--~~~~i 131 (330)
T 2pzm_A 65 AGLSVIEGSVTDAGLLERAFDSF-----KPTHVVHSAAAYKDP----DDWAED--AATNVQGSINVAKAASKA--GVKRL 131 (330)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCCCCSCT----TCHHHH--HHHHTHHHHHHHHHHHHH--TCSEE
T ss_pred CCceEEEeeCCCHHHHHHHHhhc-----CCCEEEECCccCCCc----cccChh--HHHHHHHHHHHHHHHHHc--CCCEE
Confidence 35778999999999988887754 799999999986532 224555 888999998888887641 23466
Q ss_pred EEEeccc
Q psy2266 89 VNVASKL 95 (313)
Q Consensus 89 V~isS~~ 95 (313)
|++||..
T Consensus 132 V~~SS~~ 138 (330)
T 2pzm_A 132 LNFQTAL 138 (330)
T ss_dssp EEEEEGG
T ss_pred EEecCHH
Confidence 6666543
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=98.76 E-value=2.7e-09 Score=99.14 Aligned_cols=123 Identities=8% Similarity=0.070 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHcCCccEEEeccCcCC--CCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccc
Q psy2266 117 EDQLLDMMTDYVQYNGPLDKILDTAMDTA--PGSF----GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM 190 (313)
Q Consensus 117 ~~~~~~~~~~~~~~~G~lD~Linna~~~~--~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~ 190 (313)
+++++++++.+.+++|++|+||||||... .+++ .++|+.++++|+.|++.++++++|.|+++|+||++||..+.
T Consensus 117 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~ 196 (319)
T 2ptg_A 117 GFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASE 196 (319)
T ss_dssp CCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC--
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccc
Confidence 45789999999999999999999999753 4454 37899999999999999999999999888999999999886
Q ss_pred cccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCC-CchhhhHHHHHHHHHHHHhhhcc-CCCCCCeEE
Q psy2266 191 LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPE-FSYSVSKLGVAKLSFIQHATLSK-DKRRPDIIV 268 (313)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~al~~l~~~~~~~l~~-~~~~~gI~v 268 (313)
.. ..+. ..|++||+|+..|++.++.++++ . ||+|
T Consensus 197 ~~----------------------------------------~~~~~~~Y~asKaal~~l~~~la~el~~~~----gIrv 232 (319)
T 2ptg_A 197 KV----------------------------------------IPGYGGGMSSAKAALESDCRTLAFEAGRAR----AVRV 232 (319)
T ss_dssp --------------------------------------------------------THHHHHHHHHHHHHHH----CCEE
T ss_pred cc----------------------------------------cCccchhhHHHHHHHHHHHHHHHHHhcccc----CeeE
Confidence 51 1222 36999999999999999999874 5 9999
Q ss_pred Eeecccccccccccc
Q psy2266 269 NPVHPGYVNTDLTEH 283 (313)
Q Consensus 269 n~v~PG~v~T~~~~~ 283 (313)
|+|+||+|+|+|.+.
T Consensus 233 n~v~PG~v~T~~~~~ 247 (319)
T 2ptg_A 233 NCISAGPLKSRAASA 247 (319)
T ss_dssp EEEEECCCC------
T ss_pred EEEeeCCccChhhhh
Confidence 999999999999765
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=1.2e-08 Score=92.94 Aligned_cols=91 Identities=19% Similarity=0.097 Sum_probs=70.5
Q ss_pred cccCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc---ch
Q psy2266 81 LLRPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF---GQ 151 (313)
Q Consensus 81 ~m~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~---~~ 151 (313)
+.++|.+++.++........ .+.+. ....+|..++++++++++.+.++||++|+||||||.....++ .+
T Consensus 27 la~~Ga~Vv~~~r~~~~~~~--~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e 104 (258)
T 4gkb_A 27 LAEERAIPVVFARHAPDGAF--LDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRD 104 (258)
T ss_dssp HHHTTCEEEEEESSCCCHHH--HHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHH
T ss_pred HHHcCCEEEEEECCcccHHH--HHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHH
Confidence 33567788887765433211 11111 124678889999999999999999999999999998755554 37
Q ss_pred hhhhhhhcccccHHHHHHHHhh
Q psy2266 152 RAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+|+.++++|+.|+++++++++|
T Consensus 105 ~~~~~~~vNl~g~~~~~~~~~p 126 (258)
T 4gkb_A 105 AFVASLERNLIHYYAMAHYCVP 126 (258)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHH
Confidence 8999999999999999999998
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.73 E-value=4.4e-08 Score=90.87 Aligned_cols=78 Identities=15% Similarity=0.069 Sum_probs=56.5
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccC---
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP--- 84 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~--- 84 (313)
+.++.++.+|++|.++++++++ +++|+||||||.... ...++++..+++|+.++..+++++.+..++
T Consensus 63 ~~~~~~~~~Dl~d~~~~~~~~~------~~~d~vih~A~~~~~----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~ 132 (342)
T 2hrz_A 63 SGAVDARAADLSAPGEAEKLVE------ARPDVIFHLAAIVSG----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGY 132 (342)
T ss_dssp CSEEEEEECCTTSTTHHHHHHH------TCCSEEEECCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCC
T ss_pred CCceeEEEcCCCCHHHHHHHHh------cCCCEEEECCccCcc----cccccHHHHHHHHHHHHHHHHHHHHhcccccCC
Confidence 3457788999999998887765 479999999997541 112677888888888888888877664321
Q ss_pred CceEEEEeccc
Q psy2266 85 HARVVNVASKL 95 (313)
Q Consensus 85 ~g~IV~isS~~ 95 (313)
.+++|++||..
T Consensus 133 ~~~iv~~SS~~ 143 (342)
T 2hrz_A 133 KPRVVFTSSIA 143 (342)
T ss_dssp CCEEEEEEEGG
T ss_pred CcEEEEeCchH
Confidence 25666666643
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=98.71 E-value=9.1e-08 Score=85.96 Aligned_cols=155 Identities=14% Similarity=0.056 Sum_probs=100.8
Q ss_pred HHHHHHhcccC-CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchh
Q psy2266 74 VCHILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQR 152 (313)
Q Consensus 74 l~ra~~~~m~~-~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~ 152 (313)
+-++++..+.+ +..|+.+++....... .. .....+|..+++++.++++ ++|+++||||... .+.
T Consensus 14 iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~-~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~a~~~~----~~~ 78 (267)
T 3ay3_A 14 VGSAIRPHLGTLAHEVRLSDIVDLGAAE---AH-EEIVACDLADAQAVHDLVK-------DCDGIIHLGGVSV----ERP 78 (267)
T ss_dssp HHHHHGGGGGGTEEEEEECCSSCCCCCC---TT-EEECCCCTTCHHHHHHHHT-------TCSEEEECCSCCS----CCC
T ss_pred HHHHHHHHHHhCCCEEEEEeCCCccccC---CC-ccEEEccCCCHHHHHHHHc-------CCCEEEECCcCCC----CCC
Confidence 34556655544 5677766664432111 11 1234567778777766654 5999999999762 356
Q ss_pred hhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccC
Q psy2266 153 AETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEA 232 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (313)
++..+++|+.|+..+++++.+ ...++||++||.......+... .++++ ..
T Consensus 79 ~~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~~~~~~~~~~---------~~~E~-------------------~~ 128 (267)
T 3ay3_A 79 WNDILQANIIGAYNLYEAARN--LGKPRIVFASSNHTIGYYPRTT---------RIDTE-------------------VP 128 (267)
T ss_dssp HHHHHHHTHHHHHHHHHHHHH--TTCCEEEEEEEGGGSTTSBTTS---------CBCTT-------------------SC
T ss_pred HHHHHHHHHHHHHHHHHHHHH--hCCCEEEEeCCHHHhCCCCCCC---------CCCCC-------------------CC
Confidence 788999999999999999875 2347999999987653211000 00000 01
Q ss_pred CCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccc-cccc
Q psy2266 233 GWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYV-NTDL 280 (313)
Q Consensus 233 ~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v-~T~~ 280 (313)
..+...|+.||.++..+++.+++ ++||+++.+.||++ .++.
T Consensus 129 ~~~~~~Y~~sK~~~e~~~~~~~~-------~~gi~~~~lrp~~v~~~~~ 170 (267)
T 3ay3_A 129 RRPDSLYGLSKCFGEDLASLYYH-------KFDIETLNIRIGSCFPKPK 170 (267)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHH-------TTCCCEEEEEECBCSSSCC
T ss_pred CCCCChHHHHHHHHHHHHHHHHH-------HcCCCEEEEeceeecCCCC
Confidence 22345699999999999966542 23899999999997 5553
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=98.71 E-value=1.1e-08 Score=94.33 Aligned_cols=41 Identities=17% Similarity=0.242 Sum_probs=34.4
Q ss_pred CchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 237 FSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 237 ~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
..|+.||.+...+++.+++++. . |++++++.||.|.++...
T Consensus 174 ~~Y~~sK~~~e~~~~~~~~~~~----~-~~~~~~~rp~~v~g~~~~ 214 (342)
T 1y1p_A 174 WVYAASKTEAELAAWKFMDENK----P-HFTLNAVLPNYTIGTIFD 214 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----C-SSEEEEEEESEEECCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----C-CceEEEEcCCceECCCCC
Confidence 4599999999999987777653 2 799999999999998754
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=2.2e-08 Score=88.26 Aligned_cols=35 Identities=26% Similarity=0.256 Sum_probs=28.6
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR 49 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~ 49 (313)
+.++.++.+|++|.++++++++ .+|+||||||...
T Consensus 47 ~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~a~~~~ 81 (253)
T 1xq6_A 47 GGEADVFIGDITDADSINPAFQ-------GIDALVILTSAVP 81 (253)
T ss_dssp TCCTTEEECCTTSHHHHHHHHT-------TCSEEEECCCCCC
T ss_pred CCCeeEEEecCCCHHHHHHHHc-------CCCEEEEeccccc
Confidence 3456788999999988887764 5899999999864
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=5.4e-08 Score=88.74 Aligned_cols=93 Identities=19% Similarity=0.156 Sum_probs=71.3
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC--CCCc---
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA--PGSF--- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~--~~~~--- 149 (313)
++++..+ ++|.+|+.+++..... . .+ .....+|..++++++.+++.+.++||++|+||||||... .+++
T Consensus 25 ~aia~~la~~Ga~V~~~~r~~~~~--~-~~--~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~ 99 (261)
T 4h15_A 25 AATVSLFLELGAQVLTTARARPEG--L-PE--ELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSAL 99 (261)
T ss_dssp HHHHHHHHHTTCEEEEEESSCCTT--S-CT--TTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGC
T ss_pred HHHHHHHHHcCCEEEEEECCchhC--C-Cc--EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccC
Confidence 3444333 5678888777643211 1 11 123567888999999999999999999999999999854 3455
Q ss_pred -chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 -GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 -~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.++|++++++|++|+++++++++|
T Consensus 100 ~~e~~~~~~~vNl~g~~~~~~~~~p 124 (261)
T 4h15_A 100 SDDDWYNELSLNLFAAVRLDRQLVP 124 (261)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhHHHHHHHHhhch
Confidence 378999999999999999999999
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=1e-07 Score=88.44 Aligned_cols=73 Identities=21% Similarity=0.203 Sum_probs=57.8
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.++.++.+|++|.++++++++ .+|+||||||.... ... ++++..+++|+.++..+++++.+. +++
T Consensus 54 ~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~ 119 (348)
T 1oc2_A 54 DRVELVVGDIADAELVDKLAA-------KADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY---DIR 119 (348)
T ss_dssp SSEEEEECCTTCHHHHHHHHT-------TCSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH---TCE
T ss_pred CCeEEEECCCCCHHHHHHHhh-------cCCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh---CCe
Confidence 467889999999988777654 35999999997541 122 567889999999999999999875 348
Q ss_pred EEEEeccc
Q psy2266 88 VVNVASKL 95 (313)
Q Consensus 88 IV~isS~~ 95 (313)
+|++||..
T Consensus 120 ~v~~SS~~ 127 (348)
T 1oc2_A 120 FHHVSTDE 127 (348)
T ss_dssp EEEEEEGG
T ss_pred EEEecccc
Confidence 99888865
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=5.1e-08 Score=85.15 Aligned_cols=35 Identities=6% Similarity=0.055 Sum_probs=28.8
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIY 48 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~ 48 (313)
.+.++..+++|++|.++++++++ ++|+||||||..
T Consensus 50 ~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vv~~ag~~ 84 (221)
T 3r6d_A 50 DHERVTVIEGSFQNPGXLEQAVT-------NAEVVFVGAMES 84 (221)
T ss_dssp TSTTEEEEECCTTCHHHHHHHHT-------TCSEEEESCCCC
T ss_pred CCCceEEEECCCCCHHHHHHHHc-------CCCEEEEcCCCC
Confidence 45678889999999988877764 689999999863
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=1e-07 Score=88.88 Aligned_cols=75 Identities=19% Similarity=0.112 Sum_probs=53.9
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.++.++.+|++|.+++.++++ ++|+||||||..... ...++++..+++|+.++..+++++.+. .-+++
T Consensus 81 ~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~ 148 (352)
T 1sb8_A 81 SNFKFIQGDIRNLDDCNNACA-------GVDYVLHQAALGSVP---RSINDPITSNATNIDGFLNMLIAARDA--KVQSF 148 (352)
T ss_dssp TTEEEEECCTTSHHHHHHHHT-------TCSEEEECCSCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEE
T ss_pred CceEEEECCCCCHHHHHHHhc-------CCCEEEECCcccCch---hhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEE
Confidence 467889999999988877665 699999999975421 112567778888888888888877652 22466
Q ss_pred EEEeccc
Q psy2266 89 VNVASKL 95 (313)
Q Consensus 89 V~isS~~ 95 (313)
|++||..
T Consensus 149 v~~SS~~ 155 (352)
T 1sb8_A 149 TYAASSS 155 (352)
T ss_dssp EEEEEGG
T ss_pred EEeccHH
Confidence 6666644
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.64 E-value=1.2e-07 Score=87.03 Aligned_cols=160 Identities=13% Similarity=0.027 Sum_probs=100.0
Q ss_pred HHHHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhh
Q psy2266 74 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRA 153 (313)
Q Consensus 74 l~ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~ 153 (313)
+-++++..+.+.|.+|.+.+......+... .......+|..+ +++.++++ ++|+++|+|+........+++
T Consensus 13 iG~~l~~~L~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~Dl~~-~~~~~~~~-------~~d~vih~a~~~~~~~~~~~~ 83 (313)
T 3ehe_A 13 IGSHVVDKLSESNEIVVIDNLSSGNEEFVN-EAARLVKADLAA-DDIKDYLK-------GAEEVWHIAANPDVRIGAENP 83 (313)
T ss_dssp HHHHHHHHHTTTSCEEEECCCSSCCGGGSC-TTEEEECCCTTT-SCCHHHHT-------TCSEEEECCCCCCCC-CCCCH
T ss_pred HHHHHHHHHHhCCCEEEEEcCCCCChhhcC-CCcEEEECcCCh-HHHHHHhc-------CCCEEEECCCCCChhhhhhCH
Confidence 345556556555566666543322111110 011113345555 55544443 799999999976555556788
Q ss_pred hhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCC
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAG 233 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (313)
+..+++|+.|+..+++++.. ...+++|++||....-..... ..++ ....
T Consensus 84 ~~~~~~nv~~~~~l~~~~~~--~~~~~iv~~SS~~vyg~~~~~----------~~~E-------------------~~~~ 132 (313)
T 3ehe_A 84 DEIYRNNVLATYRLLEAMRK--AGVSRIVFTSTSTVYGEAKVI----------PTPE-------------------DYPT 132 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--HTCCEEEEECCGGGGCSCSSS----------SBCT-------------------TSCC
T ss_pred HHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCchHHhCcCCCC----------CCCC-------------------CCCC
Confidence 99999999999999888543 123699999997764311000 0000 0122
Q ss_pred CCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 234 WPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 234 ~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
.+...|+.||.+...+++.++.+. |++++.+.||.|-.|.
T Consensus 133 ~~~~~Y~~sK~~~e~~~~~~~~~~-------g~~~~ilRp~~v~G~~ 172 (313)
T 3ehe_A 133 HPISLYGASKLACEALIESYCHTF-------DMQAWIYRFANVIGRR 172 (313)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHT-------TCEEEEEECSCEESTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhc-------CCCEEEEeeccccCcC
Confidence 344569999999999997766553 7999999999997764
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=98.59 E-value=2.1e-07 Score=81.14 Aligned_cols=143 Identities=9% Similarity=0.062 Sum_probs=95.5
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCC-HHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhh
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLT-EDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRA 153 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~ 153 (313)
++++..+ +++..|+.+++........ ..-....+|..+ ++++++.+ .++|++++|||...
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~-------~~~d~vi~~ag~~~-------- 75 (219)
T 3dqp_A 14 KSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQL-------HGMDAIINVSGSGG-------- 75 (219)
T ss_dssp HHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTT-------TTCSEEEECCCCTT--------
T ss_pred HHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHH-------cCCCEEEECCcCCC--------
Confidence 4455444 4467888888776554433 111224556677 66665544 47999999999765
Q ss_pred hhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCC
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAG 233 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (313)
...+++|+.|+..+++++.. ..-++||++||..+....+.. +++ .
T Consensus 76 ~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~~~~~~~~~-------------e~~--------------------~ 120 (219)
T 3dqp_A 76 KSLLKVDLYGAVKLMQAAEK--AEVKRFILLSTIFSLQPEKWI-------------GAG--------------------F 120 (219)
T ss_dssp SSCCCCCCHHHHHHHHHHHH--TTCCEEEEECCTTTTCGGGCC-------------SHH--------------------H
T ss_pred CCcEeEeHHHHHHHHHHHHH--hCCCEEEEECcccccCCCccc-------------ccc--------------------c
Confidence 23889999999998888743 123689999998765421100 000 0
Q ss_pred CCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 234 WPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 234 ~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
.+...|+.+|.+...+++ . .+|++++.+.||++.++..
T Consensus 121 ~~~~~Y~~sK~~~e~~~~------~----~~~i~~~ilrp~~v~g~~~ 158 (219)
T 3dqp_A 121 DALKDYYIAKHFADLYLT------K----ETNLDYTIIQPGALTEEEA 158 (219)
T ss_dssp HHTHHHHHHHHHHHHHHH------H----SCCCEEEEEEECSEECSCC
T ss_pred ccccHHHHHHHHHHHHHH------h----ccCCcEEEEeCceEecCCC
Confidence 123469999999988884 2 3489999999999988754
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=1e-07 Score=87.33 Aligned_cols=163 Identities=11% Similarity=0.017 Sum_probs=101.7
Q ss_pred HHHHhcc-cCCceEEEEeccccc-ccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhh
Q psy2266 76 HILFPLL-RPHARVVNVASKLGM-LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRA 153 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~ 153 (313)
++++..+ +++..|+.+.+.... ..... ..-....+|..+.+++++.++. +++|+++|+|+........+++
T Consensus 14 ~~l~~~L~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~vi~~a~~~~~~~~~~~~ 86 (311)
T 2p5y_A 14 SHIVEDLLARGLEVAVLDNLATGKRENVP--KGVPFFRVDLRDKEGVERAFRE-----FRPTHVSHQAAQASVKVSVEDP 86 (311)
T ss_dssp HHHHHHHHTTTCEEEEECCCSSCCGGGSC--TTCCEECCCTTCHHHHHHHHHH-----HCCSEEEECCSCCCHHHHHHCH
T ss_pred HHHHHHHHHCCCEEEEEECCCcCchhhcc--cCeEEEECCCCCHHHHHHHHHh-----cCCCEEEECccccCchhhhhCH
Confidence 4444444 456777776552211 11111 0111235677788887776653 3789999999975433234677
Q ss_pred hhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCC
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAG 233 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (313)
+..+++|+.|+..+++++... .-++||++||..+........ ...++ ....
T Consensus 87 ~~~~~~N~~g~~~l~~a~~~~--~~~~iv~~SS~~~~~g~~~~~--------~~~~E-------------------~~~~ 137 (311)
T 2p5y_A 87 VLDFEVNLLGGLNLLEACRQY--GVEKLVFASTGGAIYGEVPEG--------ERAEE-------------------TWPP 137 (311)
T ss_dssp HHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEHHHHHCCCCTT--------CCBCT-------------------TSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCChhhcCCCCCC--------CCcCC-------------------CCCC
Confidence 889999999999999987642 236999999973221100000 00000 0012
Q ss_pred CCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 234 WPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 234 ~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
.+...|+.||+++..+++.++++. |++++.+.||.|.+|..
T Consensus 138 ~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~~lrp~~v~Gp~~ 178 (311)
T 2p5y_A 138 RPKSPYAASKAAFEHYLSVYGQSY-------GLKWVSLRYGNVYGPRQ 178 (311)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECEEECTTC
T ss_pred CCCChHHHHHHHHHHHHHHHHHHc-------CCCEEEEeeccccCcCC
Confidence 234569999999999997766542 79999999999988864
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=1.5e-07 Score=87.07 Aligned_cols=127 Identities=19% Similarity=0.053 Sum_probs=89.5
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLG 189 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~ 189 (313)
..+|..+.+++++++ +++|+++||||........++++..+++|+.|+..+++++.+.. .++||++||...
T Consensus 60 ~~~Dl~d~~~~~~~~-------~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~--~~~~v~~SS~~v 130 (337)
T 1r6d_A 60 VHGDIRDAGLLAREL-------RGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG--VGRVVHVSTNQV 130 (337)
T ss_dssp EECCTTCHHHHHHHT-------TTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGG
T ss_pred EEcCCCCHHHHHHHh-------cCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEecchHH
Confidence 355777877666554 78999999999754322335678899999999999999998852 369999999765
Q ss_pred ccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEE
Q psy2266 190 MLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVN 269 (313)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn 269 (313)
..... . ...++ .....+...|+.||.+...+++.++.+. |++++
T Consensus 131 yg~~~-~---------~~~~E-------------------~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------g~~~~ 174 (337)
T 1r6d_A 131 YGSID-S---------GSWTE-------------------SSPLEPNSPYAASKAGSDLVARAYHRTY-------GLDVR 174 (337)
T ss_dssp GCCCS-S---------SCBCT-------------------TSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEE
T ss_pred hCCCC-C---------CCCCC-------------------CCCCCCCCchHHHHHHHHHHHHHHHHHH-------CCCEE
Confidence 32110 0 00000 0012334569999999999997766542 79999
Q ss_pred eecccccccccc
Q psy2266 270 PVHPGYVNTDLT 281 (313)
Q Consensus 270 ~v~PG~v~T~~~ 281 (313)
.+.||.|.++..
T Consensus 175 ilrp~~v~G~~~ 186 (337)
T 1r6d_A 175 ITRCCNNYGPYQ 186 (337)
T ss_dssp EEEECEEECTTC
T ss_pred EEEeeeeECCCC
Confidence 999999988764
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.56 E-value=4.7e-08 Score=88.00 Aligned_cols=105 Identities=10% Similarity=0.025 Sum_probs=79.3
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCch----hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQ----ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~----~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~ 149 (313)
++++..+ ++|.+|+.+++......+.... +.+ ....+|..++++++++++.+.+++|++|+||||||....+++
T Consensus 20 ~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 99 (257)
T 3imf_A 20 KGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPA 99 (257)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 3444433 4577888777655433221110 111 224678889999999999999999999999999999877776
Q ss_pred c----hhhhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 150 G----QRAETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 150 ~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
. ++|+.++++|+.|++.++++++|.|++++.
T Consensus 100 ~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~ 134 (257)
T 3imf_A 100 EDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI 134 (257)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC
Confidence 3 689999999999999999999999987654
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.56 E-value=2e-07 Score=86.21 Aligned_cols=151 Identities=16% Similarity=0.050 Sum_probs=91.8
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
+++..|+.+++.......... .......+|..+.+++.+.++ ++|+++|+|+... ...++++..+++|+.
T Consensus 35 ~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~~~~--~~~~~~~~~~~~n~~ 104 (342)
T 2x4g_A 35 AAGHDLVLIHRPSSQIQRLAY-LEPECRVAEMLDHAGLERALR-------GLDGVIFSAGYYP--SRPRRWQEEVASALG 104 (342)
T ss_dssp HTTCEEEEEECTTSCGGGGGG-GCCEEEECCTTCHHHHHHHTT-------TCSEEEEC--------------CHHHHHHH
T ss_pred HCCCEEEEEecChHhhhhhcc-CCeEEEEecCCCHHHHHHHHc-------CCCEEEECCccCc--CCCCCHHHHHHHHHH
Confidence 356788877765443322111 011224557778777665543 6999999999654 234678889999999
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCC----CCc
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWP----EFS 238 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 238 (313)
|+..+++++.+. .-+++|++||........... . .++ + ....+ ...
T Consensus 105 ~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~----~-----~~E------------------~-~~~~p~~~~~~~ 154 (342)
T 2x4g_A 105 QTNPFYAACLQA--RVPRILYVGSAYAMPRHPQGL----P-----GHE------------------G-LFYDSLPSGKSS 154 (342)
T ss_dssp HHHHHHHHHHHH--TCSCEEEECCGGGSCCCTTSS----C-----BCT------------------T-CCCSSCCTTSCH
T ss_pred HHHHHHHHHHHc--CCCeEEEECCHHhhCcCCCCC----C-----CCC------------------C-CCCCccccccCh
Confidence 999999998873 337999999987653211000 0 000 0 01122 456
Q ss_pred hhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 239 Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
|+.+|.+.+.+++.+++ . |++++.+.||.|.++..
T Consensus 155 Y~~sK~~~e~~~~~~~~----~----g~~~~ilrp~~v~g~~~ 189 (342)
T 2x4g_A 155 YVLCKWALDEQAREQAR----N----GLPVVIGIPGMVLGELD 189 (342)
T ss_dssp HHHHHHHHHHHHHHHHH----T----TCCEEEEEECEEECSCC
T ss_pred HHHHHHHHHHHHHHHhh----c----CCcEEEEeCCceECCCC
Confidence 99999999999965543 2 79999999999988764
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=3.4e-07 Score=84.92 Aligned_cols=78 Identities=19% Similarity=0.244 Sum_probs=55.3
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
+.++.++.+|++|.++++++++. + ++|+||||||..... ...++++..+++|+.++..+++++... ..++
T Consensus 57 ~~~~~~~~~D~~~~~~~~~~~~~----~-~~d~vih~A~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~ 126 (348)
T 1ek6_A 57 GRSVEFEEMDILDQGALQRLFKK----Y-SFMAVIHFAGLKAVG---ESVQKPLDYYRVNLTGTIQLLEIMKAH--GVKN 126 (348)
T ss_dssp TCCCEEEECCTTCHHHHHHHHHH----C-CEEEEEECCSCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCE
T ss_pred CCceEEEECCCCCHHHHHHHHHh----c-CCCEEEECCCCcCcc---chhhchHHHHHHHHHHHHHHHHHHHHh--CCCE
Confidence 44678899999999988877764 2 799999999975421 122567788888888888888865431 2246
Q ss_pred EEEEeccc
Q psy2266 88 VVNVASKL 95 (313)
Q Consensus 88 IV~isS~~ 95 (313)
+|++||..
T Consensus 127 iv~~SS~~ 134 (348)
T 1ek6_A 127 LVFSSSAT 134 (348)
T ss_dssp EEEEEEGG
T ss_pred EEEECcHH
Confidence 66666643
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.55 E-value=8.9e-08 Score=86.54 Aligned_cols=93 Identities=13% Similarity=0.007 Sum_probs=67.4
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc--chh
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF--GQR 152 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~--~~~ 152 (313)
++++..+ ++|.+|+.+......+.... .+.-....+|..+++++++++ ++||++|+||||||...+... .++
T Consensus 25 ~aia~~la~~Ga~Vv~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~----~~~g~iDiLVNNAGi~~~~~~~~~~~ 99 (242)
T 4b79_A 25 AAIAMQFAELGAEVVALGLDADGVHAPR-HPRIRREELDITDSQRLQRLF----EALPRLDVLVNNAGISRDREEYDLAT 99 (242)
T ss_dssp HHHHHHHHHTTCEEEEEESSTTSTTSCC-CTTEEEEECCTTCHHHHHHHH----HHCSCCSEEEECCCCCCGGGGGSHHH
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHhhhh-cCCeEEEEecCCCHHHHHHHH----HhcCCCCEEEECCCCCCCcccCCHHH
Confidence 3444433 56888888877655444332 222233567888988876654 679999999999998643332 378
Q ss_pred hhhhhhcccccHHHHHHHHhh
Q psy2266 153 AETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p 173 (313)
|++++++|+.|+|+++|+++|
T Consensus 100 w~~~~~vNl~g~~~~~~~~~p 120 (242)
T 4b79_A 100 FERVLRLNLSAAMLASQLARP 120 (242)
T ss_dssp HHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHH
Confidence 999999999999999999998
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.55 E-value=1.9e-07 Score=84.90 Aligned_cols=97 Identities=16% Similarity=0.082 Sum_probs=74.6
Q ss_pred HHHhcc-cCCceEEEEecccccccCCCch--h----hh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCc
Q psy2266 77 ILFPLL-RPHARVVNVASKLGMLYNVPSQ--E----LR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMD 143 (313)
Q Consensus 77 a~~~~m-~~~g~IV~isS~~~~~~~~~~~--~----~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~ 143 (313)
+++..+ ++|.+|+.+++........... . +. ....+|..++++++++++.+.+++|++|+||||||.
T Consensus 21 aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~ 100 (274)
T 3e03_A 21 AIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASA 100 (274)
T ss_dssp HHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 343333 5577888887766543332211 1 11 124678889999999999999999999999999999
Q ss_pred CCCCCcc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 144 TAPGSFG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 144 ~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
...+++. ++|+.++++|+.|++.++++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 134 (274)
T 3e03_A 101 IWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLP 134 (274)
T ss_dssp CCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHH
Confidence 8777763 78999999999999999999999
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.53 E-value=1.2e-07 Score=86.16 Aligned_cols=90 Identities=12% Similarity=0.104 Sum_probs=73.0
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLA 158 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~ 158 (313)
++|.+|+.+++....+...... ......+|..+.++++++++.+.+.+|++|+||||||....+++ .++|+.+++
T Consensus 38 ~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 116 (266)
T 3p19_A 38 EEGHPLLLLARRVERLKALNLP-NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFD 116 (266)
T ss_dssp HTTCCEEEEESCHHHHHTTCCT-TEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred HCCCEEEEEECCHHHHHHhhcC-CceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 5677888887765554443222 11234678889999999999999999999999999999877765 378999999
Q ss_pred cccccHHHHHHHHhh
Q psy2266 159 TNFFALVTVCHILFP 173 (313)
Q Consensus 159 ~N~~g~~~~~~~~~p 173 (313)
+|+.|++.++++++|
T Consensus 117 vN~~g~~~~~~~~~~ 131 (266)
T 3p19_A 117 VNVLGLLNGMQAVLA 131 (266)
T ss_dssp HHTHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHH
Confidence 999999999999998
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=98.53 E-value=8.3e-08 Score=85.99 Aligned_cols=90 Identities=11% Similarity=0.133 Sum_probs=71.4
Q ss_pred cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAET 155 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~ 155 (313)
++|.+|+.+.+......... ..+. ....+|..++++++++++.+.+++|++|+|+||||....+++ .++|+.
T Consensus 31 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~ 109 (248)
T 3op4_A 31 ERGAKVIGTATSESGAQAIS-DYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSD 109 (248)
T ss_dssp HTTCEEEEEESSHHHHHHHH-HHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHH
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHH
Confidence 55778887776544332221 1111 224678889999999999999999999999999999887775 378999
Q ss_pred hhhcccccHHHHHHHHhh
Q psy2266 156 TLATNFFALVTVCHILFP 173 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p 173 (313)
++++|+.|++.++++++|
T Consensus 110 ~~~vN~~g~~~~~~~~~~ 127 (248)
T 3op4_A 110 IMETNLTSIFRLSKAVLR 127 (248)
T ss_dssp HHHHHTHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHH
Confidence 999999999999999998
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.51 E-value=2.9e-07 Score=83.15 Aligned_cols=96 Identities=11% Similarity=0.081 Sum_probs=75.2
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG---- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~---- 150 (313)
++++..+ ++|.+|+.+++......+. .-....+|..++++++++++.+.+++|++|+||||||....+++.
T Consensus 42 ~aia~~l~~~G~~V~~~~r~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~ 117 (260)
T 3un1_A 42 AGLVRAYRDRNYRVVATSRSIKPSADP----DIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQ 117 (260)
T ss_dssp HHHHHHHHHTTCEEEEEESSCCCCSST----TEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCH
T ss_pred HHHHHHHHHCCCEEEEEeCChhhcccC----ceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCH
Confidence 3343333 4577888877654433222 112346788899999999999999999999999999998877753
Q ss_pred hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 151 QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
++|+.++++|+.|++.++++++|.|
T Consensus 118 ~~~~~~~~vN~~g~~~l~~~~~~~m 142 (260)
T 3un1_A 118 EDYDHNLGVNVAGFFHITQRAAAEM 142 (260)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 7899999999999999999999976
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.51 E-value=2.7e-07 Score=82.74 Aligned_cols=95 Identities=13% Similarity=0.051 Sum_probs=72.5
Q ss_pred cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc--------ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF--------GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~--------~~ 151 (313)
++|.+|+.+++......+... +++ ....+|..++++++++++.+.+++|++|+||||||.....++ .+
T Consensus 29 ~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~ 107 (257)
T 3tpc_A 29 QEGATVLGLDLKPPAGEEPAA-ELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALD 107 (257)
T ss_dssp HTTCEEEEEESSCC-------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHH
T ss_pred HCCCEEEEEeCChHHHHHHHH-HhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHH
Confidence 557788888776554443322 222 224568889999999999999999999999999999866553 37
Q ss_pred hhhhhhhcccccHHHHHHHHhhcccCC
Q psy2266 152 RAETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
+|+.++++|+.|++.++++++|.|+++
T Consensus 108 ~~~~~~~vN~~g~~~l~~~~~~~m~~~ 134 (257)
T 3tpc_A 108 SFARTVAVNLIGTFNMIRLAAEVMSQG 134 (257)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999764
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=1.1e-07 Score=85.25 Aligned_cols=104 Identities=9% Similarity=0.075 Sum_probs=78.8
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc-
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~- 150 (313)
++++..+ ++|.+|+.+++......+.. ..++ ....+|..++++++++++.+.+++|++|+||||||....+++.
T Consensus 20 ~a~a~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~ 98 (247)
T 3rwb_A 20 KAIAARLAADGATVIVSDINAEGAKAAA-ASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDD 98 (247)
T ss_dssp HHHHHHHHHTTCEEEEECSCHHHHHHHH-HHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGG
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCccc
Confidence 3344333 45778877766543322211 1111 2246788899999999999999999999999999998777753
Q ss_pred ---hhhhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 151 ---QRAETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 151 ---~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
++|+.++++|+.|++.++++++|.|++.+.
T Consensus 99 ~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 131 (247)
T 3rwb_A 99 VDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGK 131 (247)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 789999999999999999999999987654
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=3.9e-07 Score=84.33 Aligned_cols=74 Identities=12% Similarity=0.078 Sum_probs=51.7
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
++.++++|++|.++++++++ .+|+|||+||.... .. .+.++..+++|+.++..+++++.+.. ..+++|
T Consensus 57 ~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~~---~~-~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~riV 124 (337)
T 2c29_D 57 HLTLWKADLADEGSFDEAIK-------GCTGVFHVATPMDF---ES-KDPENEVIKPTIEGMLGIMKSCAAAK-TVRRLV 124 (337)
T ss_dssp HEEEEECCTTSTTTTHHHHT-------TCSEEEECCCCCCS---SC-SSHHHHTHHHHHHHHHHHHHHHHHHS-CCCEEE
T ss_pred eEEEEEcCCCCHHHHHHHHc-------CCCEEEEeccccCC---CC-CChHHHHHHHHHHHHHHHHHHHHhCC-CccEEE
Confidence 46788999999988776653 58999999986421 11 12345678889989888888876643 135666
Q ss_pred EEeccc
Q psy2266 90 NVASKL 95 (313)
Q Consensus 90 ~isS~~ 95 (313)
++||..
T Consensus 125 ~~SS~~ 130 (337)
T 2c29_D 125 FTSSAG 130 (337)
T ss_dssp EECCGG
T ss_pred EeeeHh
Confidence 666654
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=7e-07 Score=82.53 Aligned_cols=78 Identities=14% Similarity=0.152 Sum_probs=53.7
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
+.++.++.+|++|.++++++++. + ++|+||||||..... ...+.+...+++|+.+++.+++++... ..++
T Consensus 49 ~~~~~~~~~Dl~~~~~~~~~~~~----~-~~D~vih~A~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~ 118 (338)
T 1udb_A 49 GKHPTFVEGDIRNEALMTEILHD----H-AIDTVIHFAGLKAVG---ESVQKPLEYYDNNVNGTLRLISAMRAA--NVKN 118 (338)
T ss_dssp TSCCEEEECCTTCHHHHHHHHHH----T-TCSEEEECCSCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHH--TCCE
T ss_pred CCcceEEEccCCCHHHHHHHhhc----c-CCCEEEECCccCccc---cchhcHHHHHHHHHHHHHHHHHHHHhc--CCCe
Confidence 34577889999999988877754 2 699999999975421 112455677888888888888764331 2246
Q ss_pred EEEEeccc
Q psy2266 88 VVNVASKL 95 (313)
Q Consensus 88 IV~isS~~ 95 (313)
+|++||..
T Consensus 119 iv~~SS~~ 126 (338)
T 1udb_A 119 FIFSSSAT 126 (338)
T ss_dssp EEEEEEGG
T ss_pred EEEEccHH
Confidence 66666643
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.50 E-value=4.6e-07 Score=82.87 Aligned_cols=100 Identities=16% Similarity=0.158 Sum_probs=76.8
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCc------hhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPS------QELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAM 142 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~------~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~ 142 (313)
++++..+ ++|.+|+.+++......+... ..+. ....+|..++++++++++.+.+++|++|+||||||
T Consensus 23 ~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg 102 (285)
T 3sc4_A 23 LAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNAS 102 (285)
T ss_dssp HHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 3444433 457788888776654433211 1111 12456888999999999999999999999999999
Q ss_pred cCCCCCcc----hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 143 DTAPGSFG----QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 143 ~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
....+++. ++|+.++++|+.|++.++++++|.|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 139 (285)
T 3sc4_A 103 AINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHM 139 (285)
T ss_dssp CCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 98777753 7899999999999999999999987
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.50 E-value=9.4e-07 Score=76.99 Aligned_cols=153 Identities=12% Similarity=-0.029 Sum_probs=97.3
Q ss_pred HHHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhh
Q psy2266 75 CHILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRA 153 (313)
Q Consensus 75 ~ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~ 153 (313)
-++++..+ +++..|+.+++......... ..-....+|..+.+++.++++ ++|++++|||.....
T Consensus 17 G~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~a~~~~~~------ 81 (227)
T 3dhn_A 17 GSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCK-------GADAVISAFNPGWNN------ 81 (227)
T ss_dssp HHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHT-------TCSEEEECCCC----------
T ss_pred HHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhc-------CCCEEEEeCcCCCCC------
Confidence 34444444 45678888887766554432 111224567778887776654 589999999865221
Q ss_pred hhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCC
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAG 233 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (313)
...+++|+.++..+++++... .-+++|++||..+.... ++... .....
T Consensus 82 ~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~-~~~~~-----------------------------~~~~~ 129 (227)
T 3dhn_A 82 PDIYDETIKVYLTIIDGVKKA--GVNRFLMVGGAGSLFIA-PGLRL-----------------------------MDSGE 129 (227)
T ss_dssp --CCSHHHHHHHHHHHHHHHT--TCSEEEEECCSTTSEEE-TTEEG-----------------------------GGTTC
T ss_pred hhHHHHHHHHHHHHHHHHHHh--CCCEEEEeCChhhccCC-CCCcc-----------------------------ccCCc
Confidence 237889999988888776542 22589999998765421 11000 00112
Q ss_pred CCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 234 WPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 234 ~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
.+...|+.+|.+...+. +.+.++ .|++++.+.||++.++..
T Consensus 130 ~p~~~Y~~sK~~~e~~~----~~~~~~---~~~~~~ilrp~~v~g~~~ 170 (227)
T 3dhn_A 130 VPENILPGVKALGEFYL----NFLMKE---KEIDWVFFSPAADMRPGV 170 (227)
T ss_dssp SCGGGHHHHHHHHHHHH----HTGGGC---CSSEEEEEECCSEEESCC
T ss_pred chHHHHHHHHHHHHHHH----HHHhhc---cCccEEEEeCCcccCCCc
Confidence 34456999999999888 445432 389999999999977753
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=98.50 E-value=2.2e-07 Score=89.39 Aligned_cols=72 Identities=14% Similarity=0.070 Sum_probs=53.2
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
+.++.++.+|++|.+++. .++++|+||||||.... .+.++..+++|+.++..+++++.+ ...+
T Consensus 129 ~~~v~~v~~Dl~d~~~l~--------~~~~~d~Vih~A~~~~~------~~~~~~~~~~Nv~g~~~l~~aa~~---~~~~ 191 (427)
T 4f6c_A 129 LSNIEVIVGDFECMDDVV--------LPENMDTIIHAGARTDH------FGDDDEFEKVNVQGTVDVIRLAQQ---HHAR 191 (427)
T ss_dssp HTTEEEEEECC---CCCC--------CSSCCSEEEECCCCC-------------CHHHHHHHHHHHHHHHHHH---TTCE
T ss_pred cCceEEEeCCCCCcccCC--------CcCCCCEEEECCcccCC------CCCHHHHHHHHHHHHHHHHHHHHh---cCCc
Confidence 457889999999987776 56899999999998642 256788899999999999999887 5678
Q ss_pred EEEEecccc
Q psy2266 88 VVNVASKLG 96 (313)
Q Consensus 88 IV~isS~~~ 96 (313)
+|++||...
T Consensus 192 ~v~~SS~~~ 200 (427)
T 4f6c_A 192 LIYVSTISV 200 (427)
T ss_dssp EEEEEEGGG
T ss_pred EEEECchHh
Confidence 999988764
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.49 E-value=3e-07 Score=83.43 Aligned_cols=86 Identities=14% Similarity=0.124 Sum_probs=69.6
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLA 158 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~ 158 (313)
++|.+|+.++........ ....+.+|..++++++++++.+.+++|++|+||||||....+++. ++|+.+++
T Consensus 36 ~~G~~V~~~~r~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 110 (269)
T 3vtz_A 36 RYGAKVVSVSLDEKSDVN-----VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIID 110 (269)
T ss_dssp HTTCEEEEEESCC--CTT-----SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HCCCEEEEEeCCchhccC-----ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 457788877655433211 122356788899999999999999999999999999998777763 68999999
Q ss_pred cccccHHHHHHHHhh
Q psy2266 159 TNFFALVTVCHILFP 173 (313)
Q Consensus 159 ~N~~g~~~~~~~~~p 173 (313)
+|+.|++.++++++|
T Consensus 111 vN~~g~~~l~~~~~~ 125 (269)
T 3vtz_A 111 VNVNGSYLMAKYTIP 125 (269)
T ss_dssp HHTHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHH
Confidence 999999999999998
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=4.7e-07 Score=85.66 Aligned_cols=168 Identities=13% Similarity=0.007 Sum_probs=103.8
Q ss_pred HHHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc-chh
Q psy2266 75 CHILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF-GQR 152 (313)
Q Consensus 75 ~ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~-~~~ 152 (313)
-++++..+ +++..|+.+++........ .........+|..+.+++.++++ ++|++||||+......+ .++
T Consensus 42 G~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~~~~~~~~~ 113 (379)
T 2c5a_A 42 ASHIARRLKHEGHYVIASDWKKNEHMTE-DMFCDEFHLVDLRVMENCLKVTE-------GVDHVFNLAADMGGMGFIQSN 113 (379)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCCSSSCG-GGTCSEEEECCTTSHHHHHHHHT-------TCSEEEECCCCCCCHHHHTTC
T ss_pred HHHHHHHHHHCCCeEEEEECCCccchhh-ccCCceEEECCCCCHHHHHHHhC-------CCCEEEECceecCcccccccC
Confidence 34444433 4567888777654332211 00111223567778877766653 79999999997654333 567
Q ss_pred hhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccC
Q psy2266 153 AETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEA 232 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (313)
++..+++|+.|+..+++++... .-+++|++||........... .....++++ ....
T Consensus 114 ~~~~~~~Nv~g~~~ll~a~~~~--~~~~~V~~SS~~v~~~~~~~~-----~~~~~~~E~-----------------~~~~ 169 (379)
T 2c5a_A 114 HSVIMYNNTMISFNMIEAARIN--GIKRFFYASSACIYPEFKQLE-----TTNVSLKES-----------------DAWP 169 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEGGGSCGGGSSS-----SSSCEECGG-----------------GGSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEeehheeCCCCCCC-----ccCCCcCcc-----------------cCCC
Confidence 8889999999999999988642 236899999976532110000 000000000 0001
Q ss_pred CCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 233 GWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 233 ~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
..+...|+.+|.+...+++.++++. ||+++.+.||.|.++..
T Consensus 170 ~~~~~~Y~~sK~~~E~~~~~~~~~~-------gi~~~ilrp~~v~G~~~ 211 (379)
T 2c5a_A 170 AEPQDAFGLEKLATEELCKHYNKDF-------GIECRIGRFHNIYGPFG 211 (379)
T ss_dssp BCCSSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECCEECTTS
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHH-------CCCEEEEEeCceeCcCC
Confidence 2234569999999999997766542 79999999999988754
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.49 E-value=7.9e-08 Score=85.51 Aligned_cols=100 Identities=12% Similarity=0.104 Sum_probs=72.4
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchh--hhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc---
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQE--LRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF--- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~--- 149 (313)
++++..+ ++|.+|+.+++......+..... .-....+|..++++++++++.+.+++|++|+||||||....+++
T Consensus 17 ~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~ 96 (235)
T 3l6e_A 17 RALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVY 96 (235)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC------CC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhC
Confidence 3444333 55778888877654433221110 01224678889999999999999999999999999999776664
Q ss_pred -chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 150 -GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 150 -~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
.++|+.++++|+.|++.++++++|.|
T Consensus 97 ~~~~~~~~~~~N~~g~~~l~~~~~~~~ 123 (235)
T 3l6e_A 97 TAEQIRRVMESNLVSTILVAQQTVRLI 123 (235)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 47899999999999999999999977
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.49 E-value=9.5e-08 Score=86.28 Aligned_cols=90 Identities=12% Similarity=0.054 Sum_probs=71.0
Q ss_pred cCCceEEEEecccccccCCCchhh------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~ 151 (313)
++|.+|+.+++......... .++ + ....+|..++++++++++.+.+++|++|+||||||....+++ .+
T Consensus 32 ~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~ 110 (262)
T 3pk0_A 32 RAGANVAVAGRSTADIDACV-ADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPE 110 (262)
T ss_dssp HTTCEEEEEESCHHHHHHHH-HHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHH
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHH
Confidence 55778888776544332211 111 1 224668889999999999999999999999999999877765 37
Q ss_pred hhhhhhhcccccHHHHHHHHhh
Q psy2266 152 RAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+|+.++++|+.|++.++++++|
T Consensus 111 ~~~~~~~~N~~g~~~~~~~~~~ 132 (262)
T 3pk0_A 111 QLNGIFAVNVNGTFYAVQACLD 132 (262)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHH
Confidence 8999999999999999999998
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.5e-07 Score=85.45 Aligned_cols=97 Identities=12% Similarity=0.117 Sum_probs=74.2
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++......+. ...+. ....+|..++++++++++.+.+++|++|+||||||....++
T Consensus 18 ~aia~~la~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~ 96 (264)
T 3tfo_A 18 EGIARELGVAGAKILLGARRQARIEAI-ATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSP 96 (264)
T ss_dssp HHHHHHHHHTTCEEEEEESSHHHHHHH-HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHH-HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 3444333 5677888877655443222 11111 12457888999999999999999999999999999988777
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+. ++|+.++++|+.|++.++++++|
T Consensus 97 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 125 (264)
T 3tfo_A 97 LAAVKVDEWERMIDVNIKGVLWGIGAVLP 125 (264)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 63 78999999999999999999998
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.47 E-value=1.5e-07 Score=86.77 Aligned_cols=97 Identities=18% Similarity=0.091 Sum_probs=74.4
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh-------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR-------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG 147 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~-------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~ 147 (313)
++++..+ ++|.+|+.+++......+.. .++. ....+|..++++++++++.+.+++|++|+||||||....+
T Consensus 55 ~aia~~la~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~ 133 (293)
T 3rih_A 55 RGIATVFARAGANVAVAARSPRELSSVT-AELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEA 133 (293)
T ss_dssp HHHHHHHHHTTCEEEEEESSGGGGHHHH-HHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 3444433 55778888876654432221 1111 1246788899999999999999999999999999998777
Q ss_pred Cc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 148 SF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 148 ~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++ .++|+.++++|+.|++.++++++|
T Consensus 134 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 163 (293)
T 3rih_A 134 RLDTMTPEQLSEVLDVNVKGTVYTVQACLA 163 (293)
T ss_dssp CTTTCCHHHHHHHHHHHTHHHHHHHHHTHH
T ss_pred CcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 75 378999999999999999999998
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.46 E-value=1.5e-06 Score=81.74 Aligned_cols=126 Identities=8% Similarity=-0.052 Sum_probs=86.3
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccC-CCceEEecCCc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP-HARVVNVASKL 188 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~-~g~iv~vss~~ 188 (313)
..+|..+.+++.++++.+ ++|++|||||........++++..+++|+.|+..+++++.+...+ .++||++||..
T Consensus 84 ~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~ 158 (375)
T 1t2a_A 84 HYGDLTDSTCLVKIINEV-----KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSE 158 (375)
T ss_dssp EECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG
T ss_pred EEccCCCHHHHHHHHHhc-----CCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchh
Confidence 356777888888777665 799999999975433334678889999999999999999886542 37999999987
Q ss_pred cccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEE
Q psy2266 189 GMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIV 268 (313)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~v 268 (313)
........ .++++ ....+...|+.||++...+++.++.+. |+.+
T Consensus 159 ~~~~~~~~----------~~~E~-------------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~ 202 (375)
T 1t2a_A 159 LYGKVQEI----------PQKET-------------------TPFYPRSPYGAAKLYAYWIVVNFREAY-------NLFA 202 (375)
T ss_dssp GTCSCSSS----------SBCTT-------------------SCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCEE
T ss_pred hhCCCCCC----------CCCcc-------------------CCCCCCChhHHHHHHHHHHHHHHHHHh-------CCCE
Confidence 64311000 00000 012234569999999999997776653 4555
Q ss_pred Eeeccccc
Q psy2266 269 NPVHPGYV 276 (313)
Q Consensus 269 n~v~PG~v 276 (313)
..+.|+.+
T Consensus 203 ~i~r~~~~ 210 (375)
T 1t2a_A 203 VNGILFNH 210 (375)
T ss_dssp EEEEECCE
T ss_pred EEEecccc
Confidence 55555433
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.46 E-value=8.5e-07 Score=81.58 Aligned_cols=160 Identities=13% Similarity=0.073 Sum_probs=101.3
Q ss_pred HHHHhcc-cCCceEEEEeccccccc-CCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhh
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLY-NVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRA 153 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~ 153 (313)
++++..+ +++..|+.+++...... ... ..-....+|..+.++++++++. +++|+++|+|+........+++
T Consensus 15 ~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vih~a~~~~~~~~~~~~ 87 (330)
T 2c20_A 15 SHAVKKLVDEGLSVVVVDNLQTGHEDAIT--EGAKFYNGDLRDKAFLRDVFTQ-----ENIEAVMHFAADSLVGVSMEKP 87 (330)
T ss_dssp HHHHHHHHHTTCEEEEEECCSSCCGGGSC--TTSEEEECCTTCHHHHHHHHHH-----SCEEEEEECCCCCCHHHHHHSH
T ss_pred HHHHHHHHhCCCEEEEEeCCCcCchhhcC--CCcEEEECCCCCHHHHHHHHhh-----cCCCEEEECCcccCccccccCH
Confidence 3444333 44677777765432211 111 0112245677788877776654 5899999999976543334677
Q ss_pred hhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCC
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAG 233 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (313)
+..+++|+.|+..+++++... +-+++|++||....... .. ..++++ ...
T Consensus 88 ~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~~~-~~---------~~~~E~-------------------~~~ 136 (330)
T 2c20_A 88 LQYYNNNVYGALCLLEVMDEF--KVDKFIFSSTAATYGEV-DV---------DLITEE-------------------TMT 136 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGGCSC-SS---------SSBCTT-------------------SCC
T ss_pred HHHHHHHhHHHHHHHHHHHHc--CCCEEEEeCCceeeCCC-CC---------CCCCcC-------------------CCC
Confidence 889999999999998886531 23689999997654211 00 000000 012
Q ss_pred CCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 234 WPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 234 ~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
.+...|+.||.+...+++.++.+ .|++++.+.||.|-.+-
T Consensus 137 ~~~~~Y~~sK~~~e~~~~~~~~~-------~~~~~~ilrp~~v~G~~ 176 (330)
T 2c20_A 137 NPTNTYGETKLAIEKMLHWYSQA-------SNLRYKIFRYFNVAGAT 176 (330)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHT-------SSCEEEEEECSEEECCC
T ss_pred CCCChHHHHHHHHHHHHHHHHHH-------hCCcEEEEecCcccCCC
Confidence 23456999999999999665543 27999999999887664
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.46 E-value=5.8e-07 Score=80.31 Aligned_cols=143 Identities=15% Similarity=0.042 Sum_probs=96.0
Q ss_pred HHHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhh
Q psy2266 75 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAE 154 (313)
Q Consensus 75 ~ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~ 154 (313)
-++++..+.++..|+.+++..... . + ..+|..++++++++++.. ++|+++||||........++++
T Consensus 13 G~~l~~~L~~g~~V~~~~r~~~~~-----~--~--~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~~~~~~~~~ 78 (273)
T 2ggs_A 13 GIELSRLLSERHEVIKVYNSSEIQ-----G--G--YKLDLTDFPRLEDFIIKK-----RPDVIINAAAMTDVDKCEIEKE 78 (273)
T ss_dssp HHHHHHHHTTTSCEEEEESSSCCT-----T--C--EECCTTSHHHHHHHHHHH-----CCSEEEECCCCCCHHHHHHCHH
T ss_pred HHHHHHHHhcCCeEEEecCCCcCC-----C--C--ceeccCCHHHHHHHHHhc-----CCCEEEECCcccChhhhhhCHH
Confidence 344444444567788777654211 1 1 566778888888877664 7999999999765433456888
Q ss_pred hhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCC
Q psy2266 155 TTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGW 234 (313)
Q Consensus 155 ~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (313)
..+++|+.|+..+++++.+ .++++|++||..+..... + .+++ .....
T Consensus 79 ~~~~~n~~~~~~l~~~~~~---~~~~iv~~SS~~~~~~~~-~----------~~~e-------------------~~~~~ 125 (273)
T 2ggs_A 79 KAYKINAEAVRHIVRAGKV---IDSYIVHISTDYVFDGEK-G----------NYKE-------------------EDIPN 125 (273)
T ss_dssp HHHHHHTHHHHHHHHHHHH---TTCEEEEEEEGGGSCSSS-C----------SBCT-------------------TSCCC
T ss_pred HHHHHhHHHHHHHHHHHHH---hCCeEEEEecceeEcCCC-C----------CcCC-------------------CCCCC
Confidence 9999999999999999875 346999999988753210 0 0000 00122
Q ss_pred CCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeec
Q psy2266 235 PEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVH 272 (313)
Q Consensus 235 ~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~ 272 (313)
+...|+.+|.++..+++. + ....||++.|.
T Consensus 126 ~~~~Y~~sK~~~e~~~~~----~----~~~~iR~~~v~ 155 (273)
T 2ggs_A 126 PINYYGLSKLLGETFALQ----D----DSLIIRTSGIF 155 (273)
T ss_dssp CSSHHHHHHHHHHHHHCC----T----TCEEEEECCCB
T ss_pred CCCHHHHHHHHHHHHHhC----C----CeEEEeccccc
Confidence 345699999999999843 1 22367888777
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=1.6e-07 Score=85.77 Aligned_cols=159 Identities=13% Similarity=-0.084 Sum_probs=99.7
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhh
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAE 154 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~ 154 (313)
++++..+ +++..|+.+++......... ........+|..+.+ +.+. +.. |+++|||+........++++
T Consensus 14 ~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~d~~-~~~~-------~~~-d~vih~A~~~~~~~~~~~~~ 83 (312)
T 3ko8_A 14 SHLVDKLVELGYEVVVVDNLSSGRREFV-NPSAELHVRDLKDYS-WGAG-------IKG-DVVFHFAANPEVRLSTTEPI 83 (312)
T ss_dssp HHHHHHHHHTTCEEEEECCCSSCCGGGS-CTTSEEECCCTTSTT-TTTT-------CCC-SEEEECCSSCSSSGGGSCHH
T ss_pred HHHHHHHHhCCCEEEEEeCCCCCchhhc-CCCceEEECccccHH-HHhh-------cCC-CEEEECCCCCCchhhhhCHH
Confidence 3444444 45677777765443322111 011112344555543 3322 223 99999999765555567888
Q ss_pred hhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCC
Q psy2266 155 TTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGW 234 (313)
Q Consensus 155 ~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (313)
..+++|+.|+..+++++... ..++||++||....-... .. ..++ .....
T Consensus 84 ~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~vyg~~~-~~---------~~~e-------------------~~~~~ 132 (312)
T 3ko8_A 84 VHFNENVVATFNVLEWARQT--GVRTVVFASSSTVYGDAD-VI---------PTPE-------------------EEPYK 132 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSCS-SS---------SBCT-------------------TSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHc--CCCEEEEeCcHHHhCCCC-CC---------CCCC-------------------CCCCC
Confidence 99999999999999988542 236899999977643110 00 0000 01223
Q ss_pred CCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccc
Q psy2266 235 PEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282 (313)
Q Consensus 235 ~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~ 282 (313)
+...|+.||.+...+++.++.+. |++++.+.||.|.+|...
T Consensus 133 p~~~Y~~sK~~~e~~~~~~~~~~-------g~~~~~lrp~~v~g~~~~ 173 (312)
T 3ko8_A 133 PISVYGAAKAAGEVMCATYARLF-------GVRCLAVRYANVVGPRLR 173 (312)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH-------CCEEEEEEECEEECTTCC
T ss_pred CCChHHHHHHHHHHHHHHHHHHh-------CCCEEEEeeccccCcCCC
Confidence 44569999999999997776654 799999999999988643
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=2.1e-07 Score=84.69 Aligned_cols=98 Identities=12% Similarity=0.153 Sum_probs=73.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchh-----hh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQE-----LR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~-----~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++......+..... .+ ....+|..++++++++++.+.+++|++|+||||||....++
T Consensus 41 ~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 120 (277)
T 4fc7_A 41 FRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCP 120 (277)
T ss_dssp HHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCC
Confidence 4444444 45778887776544332221111 01 12456888999999999999999999999999999887777
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+. ++|+.++++|+.|++.++++++|
T Consensus 121 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 149 (277)
T 4fc7_A 121 AGALSFNAFKTVMDIDTSGTFNVSRVLYE 149 (277)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 53 78999999999999999999998
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.46 E-value=1.7e-07 Score=84.76 Aligned_cols=100 Identities=12% Similarity=0.029 Sum_probs=73.8
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc---ch
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF---GQ 151 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~---~~ 151 (313)
++++..+ ++|.+|+.+++......+.-.........+|..++++++++++.+.+++|++|+||||||.....+. .+
T Consensus 41 ~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~ 120 (260)
T 3gem_A 41 LHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEAD 120 (260)
T ss_dssp HHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHH
T ss_pred HHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHH
Confidence 3444433 4577888877654332111000001234678889999999999999999999999999998765543 37
Q ss_pred hhhhhhhcccccHHHHHHHHhhcc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+|+.++++|+.|++.++++++|.|
T Consensus 121 ~~~~~~~vN~~g~~~~~~~~~~~m 144 (260)
T 3gem_A 121 NFTRMFSVHMLAPYLINLHCEPLL 144 (260)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999977
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.45 E-value=4.6e-07 Score=85.69 Aligned_cols=100 Identities=13% Similarity=0.112 Sum_probs=76.8
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCc------hhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPS------QELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAM 142 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~------~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~ 142 (313)
++++..+ ++|.+|+.+++......+... ..+. ....+|..++++++++++.+.+++|++|+||||||
T Consensus 59 ~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG 138 (346)
T 3kvo_A 59 KAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNAS 138 (346)
T ss_dssp HHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 4444444 557788888776654333211 1111 12456888999999999999999999999999999
Q ss_pred cCCCCCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 143 DTAPGSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 143 ~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
.....++ .++|+.++++|+.|++.++++++|.|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m 175 (346)
T 3kvo_A 139 AISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYL 175 (346)
T ss_dssp CCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 9877765 37899999999999999999999987
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=2.3e-07 Score=82.82 Aligned_cols=64 Identities=19% Similarity=0.229 Sum_probs=58.6
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..++++++++++.+.+++|++|+||||||....+++ .++|+.++++|+.|++.++++++|
T Consensus 59 ~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~ 126 (246)
T 3osu_A 59 IQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATP 126 (246)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4568889999999999999999999999999999876665 378999999999999999999998
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=98.44 E-value=1.9e-07 Score=84.87 Aligned_cols=90 Identities=12% Similarity=0.109 Sum_probs=70.6
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
++|.+|+.+++......+.. ..+. ....+|..+.++++++++.+.+++|++|+||||||....+++ .++
T Consensus 50 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~ 128 (270)
T 3ftp_A 50 RRGAMVIGTATTEAGAEGIG-AAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDE 128 (270)
T ss_dssp HTTCEEEEEESSHHHHHHHH-HHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHH
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHH
Confidence 45778887776544332221 1111 124568889999999999999999999999999998877664 378
Q ss_pred hhhhhhcccccHHHHHHHHhh
Q psy2266 153 AETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p 173 (313)
|+.++++|+.|++.++++++|
T Consensus 129 ~~~~~~vN~~g~~~l~~~~~~ 149 (270)
T 3ftp_A 129 WDAVIDTNLKAVFRLSRAVLR 149 (270)
T ss_dssp HHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHH
Confidence 999999999999999999998
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=4.1e-07 Score=84.99 Aligned_cols=158 Identities=12% Similarity=0.025 Sum_probs=99.6
Q ss_pred HHHHhcc-cCC-ceEEEEecccccc--cCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcch
Q psy2266 76 HILFPLL-RPH-ARVVNVASKLGML--YNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQ 151 (313)
Q Consensus 76 ra~~~~m-~~~-g~IV~isS~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~ 151 (313)
++++..+ +++ ..|+.+.+..... .... .. ...+|..+.+.++++++. ..+|++|++|+|||.... ..+
T Consensus 60 ~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~--~~--~~~~d~~~~~~~~~~~~~--~~~~~~d~Vih~A~~~~~--~~~ 131 (357)
T 2x6t_A 60 SNIVKALNDKGITDILVVDNLKDGTKFVNLV--DL--NIADYMDKEDFLIQIMAG--EEFGDVEAIFHEGACSST--TEW 131 (357)
T ss_dssp HHHHHHHHHTTCCCEEEEECCSSGGGGGGTT--TS--CCSEEEEHHHHHHHHHTT--CCCSSCCEEEECCSCCCT--TCC
T ss_pred HHHHHHHHHCCCcEEEEEecCCCcchhhccc--Cc--eEeeecCcHHHHHHHHhh--cccCCCCEEEECCcccCC--ccC
Confidence 3444433 345 6777776543221 1110 11 133455566666655543 236789999999997654 345
Q ss_pred hhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhccccc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKE 231 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (313)
+++..+++|+.|+..+++++.+. +. ++|++||....... ... .++++ .
T Consensus 132 ~~~~~~~~n~~~~~~ll~a~~~~--~~-r~V~~SS~~v~g~~-~~~---------~~~E~-------------------~ 179 (357)
T 2x6t_A 132 DGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYGGR-TSD---------FIESR-------------------E 179 (357)
T ss_dssp CHHHHHHHTHHHHHHHHHHHHHH--TC-CEEEEEEGGGGCSC-SSC---------CCSSG-------------------G
T ss_pred CHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEcchHHhCCC-CCC---------CcCCc-------------------C
Confidence 67889999999999999998872 33 99999998754211 000 00000 0
Q ss_pred CCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 232 AGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 232 ~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
...+...|+.+|.+.+.+++.++.+ .|++++.+.||.|-+|.
T Consensus 180 ~~~p~~~Y~~sK~~~E~~~~~~~~~-------~g~~~~ilRp~~v~Gp~ 221 (357)
T 2x6t_A 180 YEKPLNVFGYSKFLFDEYVRQILPE-------ANSQIVGFRYFNVYGPR 221 (357)
T ss_dssp GCCCSSHHHHHHHHHHHHHHHHGGG-------CSSCEEEEEECEEESSS
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHH-------cCCCEEEEecCeEECCC
Confidence 1223456999999999999554432 27999999999998765
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=98.44 E-value=4.4e-07 Score=82.27 Aligned_cols=92 Identities=16% Similarity=0.114 Sum_probs=72.0
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----c
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----G 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~ 150 (313)
++++..+ ++|.+|+.+++........ ....+|..+.++++++++.+.+++|++|+||||||....+++ .
T Consensus 42 ~aia~~la~~G~~V~~~~r~~~~~~~~------~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~ 115 (266)
T 3uxy_A 42 GAVVTALRAAGARVAVADRAVAGIAAD------LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTD 115 (266)
T ss_dssp HHHHHHHHHTTCEEEECSSCCTTSCCS------EECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCH
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHhh------hccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCH
Confidence 3344333 4577777766544333222 223678889999999999999999999999999999887775 3
Q ss_pred hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++|+.++++|+.|++.++++++|
T Consensus 116 ~~~~~~~~vN~~g~~~l~~~~~~ 138 (266)
T 3uxy_A 116 ADWSLSLGVNVEAPFRICRAAIP 138 (266)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHH
Confidence 78999999999999999999999
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=98.44 E-value=8.9e-07 Score=80.66 Aligned_cols=74 Identities=15% Similarity=0.082 Sum_probs=51.6
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVN 90 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~ 90 (313)
+.++.+|++|.++++++++.. ++|++|||||..... ..++++..+++|+.++..+++++.+. .-+++|+
T Consensus 47 ~~~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~ 115 (312)
T 2yy7_A 47 GPFEVVNALDFNQIEHLVEVH-----KITDIYLMAALLSAT----AEKNPAFAWDLNMNSLFHVLNLAKAK--KIKKIFW 115 (312)
T ss_dssp SCEEECCTTCHHHHHHHHHHT-----TCCEEEECCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHTT--SCSEEEC
T ss_pred CceEEecCCCHHHHHHHHhhc-----CCCEEEECCccCCCc----hhhChHHHHHHHHHHHHHHHHHHHHc--CCCEEEE
Confidence 567899999999888776542 699999999975321 12556777888888888888876542 1235666
Q ss_pred Eeccc
Q psy2266 91 VASKL 95 (313)
Q Consensus 91 isS~~ 95 (313)
+||..
T Consensus 116 ~SS~~ 120 (312)
T 2yy7_A 116 PSSIA 120 (312)
T ss_dssp CEEGG
T ss_pred eccHH
Confidence 65543
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.44 E-value=2.2e-06 Score=80.06 Aligned_cols=114 Identities=11% Similarity=0.054 Sum_probs=81.9
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccC-CCceEEecCCc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP-HARVVNVASKL 188 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~-~g~iv~vss~~ 188 (313)
..+|..+.+++.++++.. ++|+++||||........++++..+++|+.|+..+++++.+...+ +++||++||..
T Consensus 60 ~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~ 134 (372)
T 1db3_A 60 HYGDLSDTSNLTRILREV-----QPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSE 134 (372)
T ss_dssp CCCCSSCHHHHHHHHHHH-----CCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG
T ss_pred EECCCCCHHHHHHHHHhc-----CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChh
Confidence 456777888888877665 799999999987655555678889999999999999999886532 47999999976
Q ss_pred cccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhh
Q psy2266 189 GMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATL 257 (313)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l 257 (313)
...... .. ..++ .....+...|+.||++...+++.++.+.
T Consensus 135 v~g~~~-~~---------~~~E-------------------~~~~~~~~~Y~~sK~~~e~~~~~~~~~~ 174 (372)
T 1db3_A 135 LYGLVQ-EI---------PQKE-------------------TTPFYPRSPYAVAKLYAYWITVNYRESY 174 (372)
T ss_dssp GGTTCC-SS---------SBCT-------------------TSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCCC-CC---------CCCc-------------------cCCCCCCChHHHHHHHHHHHHHHHHHHh
Confidence 542110 00 0000 0012234569999999999998877664
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=98.44 E-value=1.9e-07 Score=84.01 Aligned_cols=92 Identities=18% Similarity=0.200 Sum_probs=72.0
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc---chhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF---GQRA 153 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~---~~~~ 153 (313)
++|.+|+.+++........ ...+. ....+|..++++++++++.+.+++|++|+||||||....+++ .++|
T Consensus 34 ~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~ 112 (256)
T 3gaf_A 34 KAGASVVVTDLKSEGAEAV-AAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDF 112 (256)
T ss_dssp HHTCEEEEEESSHHHHHHH-HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHH
T ss_pred HCCCEEEEEeCCHHHHHHH-HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHH
Confidence 4577888777654433221 11111 124578889999999999999999999999999999877665 3789
Q ss_pred hhhhhcccccHHHHHHHHhhcc
Q psy2266 154 ETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+.++++|+.|++.++++++|.|
T Consensus 113 ~~~~~vN~~g~~~l~~~~~~~~ 134 (256)
T 3gaf_A 113 EWAFKLNLFSLFRLSQLAAPHM 134 (256)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHH
Confidence 9999999999999999999977
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.43 E-value=1.8e-07 Score=85.39 Aligned_cols=92 Identities=13% Similarity=0.147 Sum_probs=72.3
Q ss_pred cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAET 155 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~ 155 (313)
++|.+|+.+++......+... +.+ ....+|..++++++++++.+.+++|++|+||||||....+++ .++|+.
T Consensus 49 ~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~ 127 (277)
T 4dqx_A 49 KNGAYVVVADVNEDAAVRVAN-EIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDR 127 (277)
T ss_dssp HTTCEEEEEESSHHHHHHHHH-HHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHH
T ss_pred HCCCEEEEEeCCHHHHHHHHH-HhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHH
Confidence 457788877765433322211 111 124578889999999999999999999999999998877665 378999
Q ss_pred hhhcccccHHHHHHHHhhcc
Q psy2266 156 TLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p~l 175 (313)
++++|+.|++.++++++|.|
T Consensus 128 ~~~vN~~g~~~~~~~~~~~~ 147 (277)
T 4dqx_A 128 IMSVNVKGIFLCSKYVIPVM 147 (277)
T ss_dssp HHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHH
Confidence 99999999999999999977
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=98.43 E-value=5.2e-07 Score=82.57 Aligned_cols=149 Identities=13% Similarity=0.109 Sum_probs=73.4
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhh
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAE 154 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~ 154 (313)
++++..+ +++..|+.+++.... + + ...+|..+.+++.++++.. ++|+++||||........++++
T Consensus 16 ~~l~~~L~~~g~~V~~~~r~~~~----~----~-~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~~~~~~~~~ 81 (315)
T 2ydy_A 16 RAVHKEFQQNNWHAVGCGFRRAR----P----K-FEQVNLLDSNAVHHIIHDF-----QPHVIVHCAAERRPDVVENQPD 81 (315)
T ss_dssp HHHHHHHHTTTCEEEEEC---------------------------CHHHHHHH-----CCSEEEECC-------------
T ss_pred HHHHHHHHhCCCeEEEEccCCCC----C----C-eEEecCCCHHHHHHHHHhh-----CCCEEEECCcccChhhhhcCHH
Confidence 3444444 446677777643221 0 1 3445666777766666544 7999999999866544557888
Q ss_pred hhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCC
Q psy2266 155 TTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGW 234 (313)
Q Consensus 155 ~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (313)
..+++|+.|+..+++++.+. ++++|++||...... .. ...+++ ....
T Consensus 82 ~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~v~~~--~~---------~~~~E~-------------------~~~~ 128 (315)
T 2ydy_A 82 AASQLNVDASGNLAKEAAAV---GAFLIYISSDYVFDG--TN---------PPYREE-------------------DIPA 128 (315)
T ss_dssp ------CHHHHHHHHHHHHH---TCEEEEEEEGGGSCS--SS---------CSBCTT-------------------SCCC
T ss_pred HHHHHHHHHHHHHHHHHHHc---CCeEEEEchHHHcCC--CC---------CCCCCC-------------------CCCC
Confidence 99999999999999998862 469999999876431 00 000000 0123
Q ss_pred CCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccc
Q psy2266 235 PEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNT 278 (313)
Q Consensus 235 ~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T 278 (313)
+...|+.+|.+...+++.++.++ ..||++.|. |+..+
T Consensus 129 ~~~~Y~~sK~~~e~~~~~~~~~~------~~lR~~~v~-G~~~~ 165 (315)
T 2ydy_A 129 PLNLYGKTKLDGEKAVLENNLGA------AVLRIPILY-GEVEK 165 (315)
T ss_dssp CCSHHHHHHHHHHHHHHHHCTTC------EEEEECSEE-CSCSS
T ss_pred CcCHHHHHHHHHHHHHHHhCCCe------EEEeeeeee-CCCCc
Confidence 34569999999999996543221 257777777 66555
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.43 E-value=1.3e-07 Score=84.99 Aligned_cols=91 Identities=18% Similarity=0.088 Sum_probs=70.7
Q ss_pred cCCceEEEEecccccccCCCchh-------hh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc---ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQE-------LR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF---GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~-------~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~---~~ 151 (313)
++|.+|+.+++...........- .+ ....+|..+.++++++++.+.+++|++|+||||||....+++ .+
T Consensus 29 ~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~ 108 (250)
T 3nyw_A 29 TDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVD 108 (250)
T ss_dssp HHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHH
T ss_pred HCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHH
Confidence 45778888876554432221110 00 124578889999999999999999999999999999776665 37
Q ss_pred hhhhhhhcccccHHHHHHHHhh
Q psy2266 152 RAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+|+.++++|+.|++.++++++|
T Consensus 109 ~~~~~~~vN~~g~~~l~~~~~~ 130 (250)
T 3nyw_A 109 NFRKIMEINVIAQYGILKTVTE 130 (250)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999998
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=2.7e-07 Score=83.73 Aligned_cols=64 Identities=13% Similarity=0.104 Sum_probs=59.1
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..++++++++++.+.+++|++|+||||||....+++ .++|+.++++|+.|++.++++++|
T Consensus 83 ~~~D~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 150 (269)
T 4dmm_A 83 VKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAK 150 (269)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4678889999999999999999999999999999887775 378999999999999999999998
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=1.8e-07 Score=84.49 Aligned_cols=92 Identities=17% Similarity=0.169 Sum_probs=72.4
Q ss_pred cCCceEEEEecccccccCCCchhhh--------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----c
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR--------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----G 150 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~--------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~ 150 (313)
++|.+|+.+++......... ..+. ....+|..++++++++++.+.+.+|++|+||||||....+++ .
T Consensus 30 ~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~ 108 (265)
T 3lf2_A 30 EAGAAVAFCARDGERLRAAE-SALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTD 108 (265)
T ss_dssp HTTCEEEEEESCHHHHHHHH-HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCH
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCH
Confidence 45778887776544332221 1111 123578889999999999999999999999999999877665 3
Q ss_pred hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 151 QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
++|+.++++|+.|++.++++++|.|
T Consensus 109 ~~~~~~~~~N~~g~~~~~~~~~~~~ 133 (265)
T 3lf2_A 109 EAWSEELQLKFFSVIHPVRAFLPQL 133 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7899999999999999999999977
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.43 E-value=1.6e-06 Score=80.36 Aligned_cols=130 Identities=16% Similarity=0.111 Sum_probs=87.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLG 189 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~ 189 (313)
..+|..+.++++++++.. ++|++|++|+........++++..+++|+.|+..+++++... .-+++|++||...
T Consensus 80 ~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~v~~SS~~v 152 (346)
T 4egb_A 80 VKGEIQNGELLEHVIKER-----DVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY--PHIKLVQVSTDEV 152 (346)
T ss_dssp EECCTTCHHHHHHHHHHH-----TCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS--TTSEEEEEEEGGG
T ss_pred EEcCCCCHHHHHHHHhhc-----CCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeCchHH
Confidence 456778888888777652 699999999987766666788899999999999998888653 2368999999765
Q ss_pred ccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEE
Q psy2266 190 MLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVN 269 (313)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn 269 (313)
........ .+++ .....+...|+.+|.+...+++.++++. |++++
T Consensus 153 y~~~~~~~---------~~~E-------------------~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------g~~~~ 197 (346)
T 4egb_A 153 YGSLGKTG---------RFTE-------------------ETPLAPNSPYSSSKASADMIALAYYKTY-------QLPVI 197 (346)
T ss_dssp GCCCCSSC---------CBCT-------------------TSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEE
T ss_pred hCCCCcCC---------CcCC-------------------CCCCCCCChhHHHHHHHHHHHHHHHHHh-------CCCEE
Confidence 43211000 0000 0012334569999999999997666542 79999
Q ss_pred eecccccccccc
Q psy2266 270 PVHPGYVNTDLT 281 (313)
Q Consensus 270 ~v~PG~v~T~~~ 281 (313)
.+.||.|-.|..
T Consensus 198 ilRp~~v~G~~~ 209 (346)
T 4egb_A 198 VTRCSNNYGPYQ 209 (346)
T ss_dssp EEEECEEESTTC
T ss_pred EEeecceeCcCC
Confidence 999999877653
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.42 E-value=1.9e-07 Score=83.35 Aligned_cols=92 Identities=15% Similarity=0.095 Sum_probs=71.5
Q ss_pred cCCceEEEEecccccccCCCchhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTL 157 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~ 157 (313)
++|.+|+.+++......+.. ..++ ....+|..++++++++++.+.+++|++|+||||||....+++ .++|+.++
T Consensus 27 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~ 105 (245)
T 1uls_A 27 KEGARLVACDIEEGPLREAA-EAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVL 105 (245)
T ss_dssp HTTCEEEEEESCHHHHHHHH-HTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 45778887776543322111 1111 224578889999999999999999999999999998876665 37899999
Q ss_pred hcccccHHHHHHHHhhcc
Q psy2266 158 ATNFFALVTVCHILFPLL 175 (313)
Q Consensus 158 ~~N~~g~~~~~~~~~p~l 175 (313)
++|+.|++.++++++|.|
T Consensus 106 ~~N~~g~~~l~~~~~~~m 123 (245)
T 1uls_A 106 RVNLTGSFLVAKAASEAM 123 (245)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHH
Confidence 999999999999999977
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.42 E-value=2.3e-07 Score=84.81 Aligned_cols=103 Identities=14% Similarity=0.141 Sum_probs=77.4
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh-------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR-------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP- 146 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~-------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~- 146 (313)
++++..+ ++|.+|+.+++......+.. .++. ....+|..++++++++++.+.+++|++|+||||||....
T Consensus 47 ~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~ 125 (281)
T 4dry_A 47 RGIAQALSAEGYSVVITGRRPDVLDAAA-GEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPP 125 (281)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 3444433 45778888776554332221 1111 224568889999999999999999999999999998654
Q ss_pred CCc----chhhhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 147 GSF----GQRAETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 147 ~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
.++ .++|+.++++|+.|++.++++++|.|++.+
T Consensus 126 ~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~ 162 (281)
T 4dry_A 126 VPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQT 162 (281)
T ss_dssp CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSS
T ss_pred CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 454 378999999999999999999999997644
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.42 E-value=1.9e-07 Score=85.12 Aligned_cols=103 Identities=16% Similarity=0.165 Sum_probs=76.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-CCc-
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-GSF- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~~~- 149 (313)
++++..+ ++|.+|+.+++......+... .++ ....+|..++++++++++.+.+++|++|+||||||.... .++
T Consensus 42 ~aia~~la~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~ 120 (272)
T 4dyv_A 42 RAVAVALAGAGYGVALAGRRLDALQETAA-EIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPME 120 (272)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGG
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHH-HhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChh
Confidence 3444333 457788877765443322211 111 224668889999999999999999999999999998755 454
Q ss_pred ---chhhhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 150 ---GQRAETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 150 ---~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
.++|+.++++|+.|++.++++++|.|++.+
T Consensus 121 ~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~ 153 (272)
T 4dyv_A 121 DLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQE 153 (272)
T ss_dssp GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSS
T ss_pred hCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC
Confidence 378999999999999999999999998644
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=98.42 E-value=2e-07 Score=83.82 Aligned_cols=97 Identities=14% Similarity=0.107 Sum_probs=75.9
Q ss_pred cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAET 155 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~ 155 (313)
++|.+|+.+++......+.. .+++ ....+|..++++++++++.+.+++|++|+||||||....+++ .++|+.
T Consensus 30 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~ 108 (259)
T 4e6p_A 30 REGATVAIADIDIERARQAA-AEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEK 108 (259)
T ss_dssp HTTCEEEEEESCHHHHHHHH-HHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHH
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHH
Confidence 55778887766543322211 1111 224578889999999999999999999999999999877775 378999
Q ss_pred hhhcccccHHHHHHHHhhcccCCCc
Q psy2266 156 TLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
++++|+.|++.++++++|.|++.+.
T Consensus 109 ~~~~N~~g~~~~~~~~~~~~~~~~~ 133 (259)
T 4e6p_A 109 LFAINVAGTLFTLQAAARQMIAQGR 133 (259)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999987543
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.42 E-value=1.6e-07 Score=84.98 Aligned_cols=104 Identities=16% Similarity=0.118 Sum_probs=79.2
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh-------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR-------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG 147 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~-------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~ 147 (313)
++++..+ ++|.+|+.+++........ ..++. ....+|..++++++++++.+.+++|++|+||||||....+
T Consensus 34 ~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 112 (266)
T 4egf_A 34 ADIARAFAAAGARLVLSGRDVSELDAA-RRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQ 112 (266)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 3444333 4577888777654443222 11111 1245688899999999999999999999999999998877
Q ss_pred Cc----chhhhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 148 SF----GQRAETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 148 ~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
++ .++|+.++++|+.|++.++++++|.|++.+.
T Consensus 113 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 149 (266)
T 4egf_A 113 PVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGE 149 (266)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 76 3689999999999999999999999987554
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=6.4e-07 Score=84.42 Aligned_cols=132 Identities=10% Similarity=-0.012 Sum_probs=88.5
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccC---CCceEEecC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP---HARVVNVAS 186 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~---~g~iv~vss 186 (313)
..+|..+.+++.++++.+ ++|++|||||........++++..+++|+.|+..+++++.+...+ ++++|++||
T Consensus 88 ~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS 162 (381)
T 1n7h_A 88 HYADLTDASSLRRWIDVI-----KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGS 162 (381)
T ss_dssp EECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_pred EECCCCCHHHHHHHHHhc-----CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCc
Confidence 356777888888777665 799999999976543334678889999999999999999997643 369999999
Q ss_pred CccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCe
Q psy2266 187 KLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDI 266 (313)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI 266 (313)
........ . ..++ .....+...|+.+|.+...+++.++.++.-.. ...+
T Consensus 163 ~~vyg~~~-~----------~~~E-------------------~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~-~~~r 211 (381)
T 1n7h_A 163 SEMFGSTP-P----------PQSE-------------------TTPFHPRSPYAASKCAAHWYTVNYREAYGLFA-CNGI 211 (381)
T ss_dssp GGGGTTSC-S----------SBCT-------------------TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEE-EEEE
T ss_pred HHHhCCCC-C----------CCCC-------------------CCCCCCCCchHHHHHHHHHHHHHHHHHhCCcE-EEEE
Confidence 77532110 0 0000 00123345699999999999988776643210 0123
Q ss_pred EEEeecccccc
Q psy2266 267 IVNPVHPGYVN 277 (313)
Q Consensus 267 ~vn~v~PG~v~ 277 (313)
.++.+.||...
T Consensus 212 ~~~~~gp~~~~ 222 (381)
T 1n7h_A 212 LFNHESPRRGE 222 (381)
T ss_dssp ECCEECTTSCT
T ss_pred eCceeCCCCCC
Confidence 44566776543
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.41 E-value=3.9e-07 Score=81.86 Aligned_cols=96 Identities=8% Similarity=-0.073 Sum_probs=73.8
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++......+.. .++. ....+|..++++++++++.+.+. |++|+||||||....++
T Consensus 21 ~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~id~lv~nAg~~~~~~ 98 (252)
T 3h7a_A 21 AEIAKKFAAEGFTVFAGRRNGEKLAPLV-AEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-APLEVTIFNVGANVNFP 98 (252)
T ss_dssp HHHHHHHHHTTCEEEEEESSGGGGHHHH-HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-SCEEEEEECCCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-CCceEEEECCCcCCCCC
Confidence 3344333 45778888877554433321 1111 22467888999999999999999 99999999999988777
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+. ++|+.++++|+.|++.++++++|
T Consensus 99 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 127 (252)
T 3h7a_A 99 ILETTDRVFRKVWEMACWAGFVSGRESAR 127 (252)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 63 78999999999999999999998
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=98.41 E-value=2.8e-07 Score=84.06 Aligned_cols=99 Identities=15% Similarity=0.114 Sum_probs=74.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++........ ..++. ....+|..++++++++++.+.+++|++|+||||||....++
T Consensus 38 ~aia~~la~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 116 (279)
T 3sju_A 38 LAVARTLAARGIAVYGCARDAKNVSAA-VDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGE 116 (279)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSC
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC
Confidence 3343333 4577888777654433221 11111 12456888999999999999999999999999999988777
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+. ++|+.++++|+.|++.++++++|.+
T Consensus 117 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 147 (279)
T 3sju_A 117 TADLDDALWADVLDTNLTGVFRVTREVLRAG 147 (279)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHhchh
Confidence 63 6899999999999999999999965
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=3.2e-07 Score=82.69 Aligned_cols=66 Identities=15% Similarity=0.090 Sum_probs=60.4
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..++++++++++.+.+++|++|+||||||....+++. ++|+.++++|+.|++.++++++|.|
T Consensus 59 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m 128 (258)
T 3oid_A 59 VKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLM 128 (258)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 45788899999999999999999999999999987777753 6899999999999999999999977
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.41 E-value=2.4e-07 Score=85.37 Aligned_cols=71 Identities=17% Similarity=0.163 Sum_probs=63.6
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC-c----chhhhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS-F----GQRAETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~-~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
..+|..++++++++++.+.+++|++|+||||||....++ + .++|+.++++|+.|++.++++++|.|++.+.
T Consensus 94 ~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 169 (299)
T 3t7c_A 94 SQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKR 169 (299)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTS
T ss_pred EECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 456888999999999999999999999999999876655 3 4789999999999999999999999987654
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.40 E-value=3e-07 Score=84.18 Aligned_cols=90 Identities=19% Similarity=0.158 Sum_probs=69.8
Q ss_pred cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-CCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-GSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~~~----~~ 151 (313)
++|.+|+.+++......+.. .++ + ....+|..++++++++++.+.+++|++|+||||||.... +++ .+
T Consensus 50 ~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~ 128 (283)
T 3v8b_A 50 ADGVTVGALGRTRTEVEEVA-DEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPF 128 (283)
T ss_dssp HTTCEEEEEESSHHHHHHHH-HHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHH
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHH
Confidence 45778888776554332221 111 1 124578889999999999999999999999999998644 454 37
Q ss_pred hhhhhhhcccccHHHHHHHHhh
Q psy2266 152 RAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+|+.++++|+.|++.++++++|
T Consensus 129 ~~~~~~~vN~~g~~~l~~~~~~ 150 (283)
T 3v8b_A 129 EWDETIAVNLRGTFLTLHLTVP 150 (283)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHH
Confidence 8999999999999999999998
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.39 E-value=3.7e-07 Score=83.38 Aligned_cols=64 Identities=14% Similarity=0.090 Sum_probs=58.9
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..++++++++++.+.+++|++|+||||||....+++ .++|+.++++|+.|++.++++++|
T Consensus 81 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 148 (281)
T 3v2h_A 81 HPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIP 148 (281)
T ss_dssp ECCCTTCHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4568889999999999999999999999999999877775 378999999999999999999998
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=98.39 E-value=4.6e-07 Score=80.07 Aligned_cols=77 Identities=21% Similarity=0.134 Sum_probs=62.9
Q ss_pred EEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCC--ceEEEE
Q psy2266 14 HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPH--ARVVNV 91 (313)
Q Consensus 14 ~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~--g~IV~i 91 (313)
+.+|++|.++++++++.+ ++++|+||||||+.... +.|+..+++|+.+++.+++++.+.|++. ++||++
T Consensus 42 ~~~D~~~~~~~~~~~~~~---~~~~d~vi~~Ag~~~~~------~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~ 112 (255)
T 2dkn_A 42 LSTPGGRETAVAAVLDRC---GGVLDGLVCCAGVGVTA------ANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIV 112 (255)
T ss_dssp TTSHHHHHHHHHHHHHHH---TTCCSEEEECCCCCTTS------SCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEE
T ss_pred ccCCcccHHHHHHHHHHc---CCCccEEEECCCCCCcc------hhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEE
Confidence 357888888888877643 47999999999986521 2478899999999999999999999663 899999
Q ss_pred eccccccc
Q psy2266 92 ASKLGMLY 99 (313)
Q Consensus 92 sS~~~~~~ 99 (313)
||......
T Consensus 113 sS~~~~~~ 120 (255)
T 2dkn_A 113 GSIAATQP 120 (255)
T ss_dssp CCGGGGST
T ss_pred eccccccc
Confidence 99887643
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=2.1e-06 Score=78.47 Aligned_cols=74 Identities=15% Similarity=0.165 Sum_probs=53.1
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVN 90 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~ 90 (313)
+.++.+|++|.+++.++++. .++|++|||||.... ...++++..+++|+.++..+++++.+. .-+++|+
T Consensus 41 ~~~~~~D~~d~~~~~~~~~~-----~~~d~vih~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~ 109 (317)
T 3ajr_A 41 IKFITLDVSNRDEIDRAVEK-----YSIDAIFHLAGILSA----KGEKDPALAYKVNMNGTYNILEAAKQH--RVEKVVI 109 (317)
T ss_dssp CCEEECCTTCHHHHHHHHHH-----TTCCEEEECCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEE
T ss_pred ceEEEecCCCHHHHHHHHhh-----cCCcEEEECCcccCC----ccccChHHHhhhhhHHHHHHHHHHHHc--CCCEEEE
Confidence 56788999999988877664 269999999997531 112556778888998888888876542 2246666
Q ss_pred Eeccc
Q psy2266 91 VASKL 95 (313)
Q Consensus 91 isS~~ 95 (313)
+||..
T Consensus 110 ~SS~~ 114 (317)
T 3ajr_A 110 PSTIG 114 (317)
T ss_dssp EEEGG
T ss_pred ecCHH
Confidence 66644
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=98.39 E-value=2.2e-07 Score=84.32 Aligned_cols=97 Identities=16% Similarity=0.097 Sum_probs=69.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc--
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF-- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~-- 149 (313)
++++..+ ++|.+|+.+.+......+.. ..++ ....+|..++++++++++.+.+++|++|+||||||....+++
T Consensus 41 ~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~ 119 (266)
T 3grp_A 41 EAIARCFHAQGAIVGLHGTREDKLKEIA-ADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVR 119 (266)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CC
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCccc
Confidence 3444333 45777777766543332221 1111 124568889999999999999999999999999999877665
Q ss_pred --chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 --GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 --~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.++|+.++++|+.|++.++++++|
T Consensus 120 ~~~~~~~~~~~vN~~g~~~l~~~~~~ 145 (266)
T 3grp_A 120 MQDQDWDDVLAVNLTAASTLTRELIH 145 (266)
T ss_dssp CHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 378999999999999999999998
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.38 E-value=2.5e-07 Score=84.50 Aligned_cols=90 Identities=14% Similarity=0.089 Sum_probs=70.5
Q ss_pred cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAET 155 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~ 155 (313)
++|.+|+.+++......+.. ..++ ....+|..++++++++++.+.+++|++|+||||||....+++ .++|+.
T Consensus 51 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~ 129 (277)
T 3gvc_A 51 DEGCHVLCADIDGDAADAAA-TKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDR 129 (277)
T ss_dssp HTTCEEEEEESSHHHHHHHH-HHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHH
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHH
Confidence 45778887776543322211 1111 124668889999999999999999999999999999877665 378999
Q ss_pred hhhcccccHHHHHHHHhh
Q psy2266 156 TLATNFFALVTVCHILFP 173 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p 173 (313)
++++|+.|++.++++++|
T Consensus 130 ~~~vN~~g~~~l~~~~~~ 147 (277)
T 3gvc_A 130 VIAINLRGAWLCTKHAAP 147 (277)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHH
Confidence 999999999999999998
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=98.37 E-value=8.3e-07 Score=79.27 Aligned_cols=87 Identities=13% Similarity=0.092 Sum_probs=68.7
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLA 158 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~ 158 (313)
+++.+|+.+++......+.. ...+|..++++++++++.+.+++|++|+||||||....+++ .++|+.+++
T Consensus 37 ~~G~~V~~~~r~~~~~~~~~------~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 110 (247)
T 1uzm_A 37 ADGHKVAVTHRGSGAPKGLF------GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVIN 110 (247)
T ss_dssp HTTCEEEEEESSSCCCTTSE------EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHH
T ss_pred HCCCEEEEEeCChHHHHHhc------CeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 45778887776543332221 15678889999999999999999999999999998766654 378999999
Q ss_pred cccccHHHHHHHHhhcc
Q psy2266 159 TNFFALVTVCHILFPLL 175 (313)
Q Consensus 159 ~N~~g~~~~~~~~~p~l 175 (313)
+|+.|++.++++++|.|
T Consensus 111 ~N~~g~~~l~~~~~~~~ 127 (247)
T 1uzm_A 111 ANLTGAFRVAQRASRSM 127 (247)
T ss_dssp HHTHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHH
Confidence 99999999999999976
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.37 E-value=4e-07 Score=82.17 Aligned_cols=90 Identities=13% Similarity=0.239 Sum_probs=69.6
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcC-CCCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDT-APGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~-~~~~~----~~ 151 (313)
++|.+|+.+++......+.. ..+. ....+|..++++++++++.+.+++|++|+||||||.. ..+++ .+
T Consensus 33 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~ 111 (264)
T 3ucx_A 33 EQGADLVLAARTVERLEDVA-KQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFE 111 (264)
T ss_dssp HTTCEEEEEESCHHHHHHHH-HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHH
T ss_pred HCcCEEEEEeCCHHHHHHHH-HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHH
Confidence 55778887776544332221 1111 1245688899999999999999999999999999985 45565 37
Q ss_pred hhhhhhhcccccHHHHHHHHhh
Q psy2266 152 RAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+|+.++++|+.|++.++++++|
T Consensus 112 ~~~~~~~~N~~g~~~~~~~~~~ 133 (264)
T 3ucx_A 112 HMRDAIELTVFGALRLIQGFTP 133 (264)
T ss_dssp HHHHHHHHHTHHHHHHHHHTHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHH
Confidence 8999999999999999999998
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.37 E-value=4.6e-07 Score=81.91 Aligned_cols=68 Identities=13% Similarity=0.076 Sum_probs=61.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-CCc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-GSF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
..+|..+.++++++++.+.+.+|++|+||||||.... .++ .++|+.++++|+.|++.+++.++|.|++
T Consensus 81 ~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 153 (272)
T 4e3z_A 81 IPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSR 153 (272)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCG
T ss_pred EEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 4568889999999999999999999999999998765 554 3789999999999999999999999976
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=2.8e-07 Score=82.36 Aligned_cols=97 Identities=19% Similarity=0.180 Sum_probs=72.5
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++........ ..++ + ....+|..++++++++++.+.+++|++|+||||||....++
T Consensus 21 ~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~ 99 (247)
T 2jah_A 21 EATARALAAEGAAVAIAARRVEKLRAL-GDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGP 99 (247)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHH-HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCc
Confidence 3343333 4577888777654332221 1111 1 12456888999999999999999999999999999887666
Q ss_pred c----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 F----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 ~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+ .++|+.++++|+.|++.++++++|
T Consensus 100 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 128 (247)
T 2jah_A 100 VEDADTTDWTRMIDTNLLGLMYMTRAALP 128 (247)
T ss_dssp STTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 5 378999999999999999999998
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=98.37 E-value=5.1e-07 Score=81.12 Aligned_cols=91 Identities=12% Similarity=0.027 Sum_probs=69.5
Q ss_pred cCCceEEEEecccccccCCCchhhh-------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR-------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~-------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~ 151 (313)
++|.+++.+.+......+....++. ....+|..+.++++++++.+.+++|++|+||||||....+++ .+
T Consensus 44 ~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~ 123 (267)
T 3gdg_A 44 EMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVE 123 (267)
T ss_dssp HTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHH
T ss_pred HCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHH
Confidence 4567777766543322111111111 124668889999999999999999999999999999877765 37
Q ss_pred hhhhhhhcccccHHHHHHHHhh
Q psy2266 152 RAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+|+.++++|+.|++.+++.++|
T Consensus 124 ~~~~~~~~N~~g~~~l~~~~~~ 145 (267)
T 3gdg_A 124 AWNHVVQVDLNGTFHCAKAVGH 145 (267)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHhcchHHHHHHHHHHH
Confidence 8999999999999999999998
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=98.37 E-value=9e-07 Score=79.65 Aligned_cols=85 Identities=11% Similarity=0.030 Sum_probs=68.8
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLA 158 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~ 158 (313)
+++.+|+.+++......+ -....+|..++++++++++.+.+++|++|+||||||....+++ .++|+.+++
T Consensus 43 ~~G~~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 116 (253)
T 2nm0_A 43 DAGDKVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVE 116 (253)
T ss_dssp HTTCEEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHH
T ss_pred HCCCEEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 457788877765433221 2234678889999999999999999999999999998776664 378999999
Q ss_pred cccccHHHHHHHHhh
Q psy2266 159 TNFFALVTVCHILFP 173 (313)
Q Consensus 159 ~N~~g~~~~~~~~~p 173 (313)
+|+.|++.++++++|
T Consensus 117 ~N~~g~~~l~~~~~~ 131 (253)
T 2nm0_A 117 TNLTGTFRVVKRANR 131 (253)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999998
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=2.3e-07 Score=81.78 Aligned_cols=163 Identities=12% Similarity=0.090 Sum_probs=124.4
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++......+....-. + ....+|..++++++++++.+.+++|++|+||||||....++
T Consensus 16 ~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~ 95 (235)
T 3l77_A 16 EAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKR 95 (235)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSEEEECCCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccccccC
Confidence 3344333 457788877765443322211100 1 12356888999999999999999999999999999987777
Q ss_pred c----chhhhhhhhcccccHHHHHHHHhhcccC-CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHH
Q psy2266 149 F----GQRAETTLATNFFALVTVCHILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQL 223 (313)
Q Consensus 149 ~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~-~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (313)
+ .++|+.++++|+.|++.++++++|.|++ ++++|+++|..+...
T Consensus 96 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~------------------------------- 144 (235)
T 3l77_A 96 LEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL------------------------------- 144 (235)
T ss_dssp TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC-------------------------------
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc-------------------------------
Confidence 4 4789999999999999999999999955 589999999887652
Q ss_pred hhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 224 AKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 224 ~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
.....+|++||+|+..|++.++ +.. +||+||+|+||+|+|++.+..
T Consensus 145 ---------~~~~~~Y~~sKaa~~~~~~~l~--~~~----~~i~v~~v~PG~v~T~~~~~~ 190 (235)
T 3l77_A 145 ---------IPYGGGYVSTKWAARALVRTFQ--IEN----PDVRFFELRPGAVDTYFGGSK 190 (235)
T ss_dssp ---------CTTCHHHHHHHHHHHHHHHHHH--HHC----TTSEEEEEEECSBSSSTTTCC
T ss_pred ---------CCCcchHHHHHHHHHHHHHHHh--hcC----CCeEEEEEeCCcccccccccc
Confidence 2233469999999999998873 333 399999999999999997664
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=1.7e-06 Score=80.22 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=29.4
Q ss_pred CCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccc
Q psy2266 235 PEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVN 277 (313)
Q Consensus 235 ~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~ 277 (313)
+...|+.||.+...+++.++++ .|++++.+.||.|.
T Consensus 148 ~~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~ilRp~~v~ 183 (347)
T 4id9_A 148 PNSPYGLTKLLGEELVRFHQRS-------GAMETVILRFSHTQ 183 (347)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHH-------SSSEEEEEEECEEE
T ss_pred CCChHHHHHHHHHHHHHHHHHh-------cCCceEEEccceEe
Confidence 3456999999999999666554 27999999999887
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.36 E-value=3.7e-07 Score=82.98 Aligned_cols=97 Identities=11% Similarity=0.093 Sum_probs=72.8
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++......+. ..++. ....+|..++++++++++.+.+++|++|+||||||....++
T Consensus 40 ~aia~~la~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~ 118 (271)
T 4ibo_A 40 RAMAEGLAVAGARILINGTDPSRVAQT-VQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKP 118 (271)
T ss_dssp HHHHHHHHHTTCEEEECCSCHHHHHHH-HHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
Confidence 3344333 4577777766544332221 11111 12456888999999999999999999999999999988777
Q ss_pred c----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 F----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 ~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+ .++|+.++++|+.|++.++++++|
T Consensus 119 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 147 (271)
T 4ibo_A 119 MIELETADWQRVIDTNLTSAFMIGREAAK 147 (271)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred chhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 5 378999999999999999999998
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=98.36 E-value=1.2e-06 Score=80.78 Aligned_cols=163 Identities=12% Similarity=0.067 Sum_probs=97.4
Q ss_pred HHHHhcc-cC-CceEEEEecccccccCCCchhhhhhhcccCCC-HHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchh
Q psy2266 76 HILFPLL-RP-HARVVNVASKLGMLYNVPSQELRQTLFNESLT-EDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQR 152 (313)
Q Consensus 76 ra~~~~m-~~-~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~ 152 (313)
++++..+ ++ +..|+.+++.............-....+|..+ .+.+++.++ ++|+++||||...+....++
T Consensus 14 ~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~~d~vih~A~~~~~~~~~~~ 86 (345)
T 2bll_A 14 NHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-------KCDVVLPLVAIATPIEYTRN 86 (345)
T ss_dssp HHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-------HCSEEEECBCCCCHHHHHHS
T ss_pred HHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc-------CCCEEEEcccccCccchhcC
Confidence 3444433 33 56788777654432221111111123445555 334444433 57999999997654444567
Q ss_pred hhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccc--
Q psy2266 153 AETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDK-- 230 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 230 (313)
++..+++|+.|+..+++++... ++++|++||....... ... .++++ ...
T Consensus 87 ~~~~~~~n~~~~~~l~~~~~~~---~~~~v~~SS~~v~g~~-~~~---------~~~e~----------------~~~~~ 137 (345)
T 2bll_A 87 PLRVFELDFEENLRIIRYCVKY---RKRIIFPSTSEVYGMC-SDK---------YFDED----------------HSNLI 137 (345)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHT---TCEEEEECCGGGGBTC-CCS---------SBCTT----------------TCCCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---CCeEEEEecHHHcCCC-CCC---------CcCCc----------------ccccc
Confidence 7889999999999998887652 3799999997653211 000 00000 000
Q ss_pred --cCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 231 --EAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 231 --~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
....+...|+.+|.+.+.+++.++++. |++++.+.||.|-.+..
T Consensus 138 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~ilrp~~v~G~~~ 183 (345)
T 2bll_A 138 VGPVNKPRWIYSVSKQLLDRVIWAYGEKE-------GLQFTLFRPFNWMGPRL 183 (345)
T ss_dssp CCCTTCGGGHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECSEECSSC
T ss_pred cCcccCcccccHHHHHHHHHHHHHHHHhc-------CCCEEEEcCCcccCCCc
Confidence 000122369999999999997666542 79999999999977653
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.35 E-value=3.7e-07 Score=82.06 Aligned_cols=99 Identities=14% Similarity=0.132 Sum_probs=77.5
Q ss_pred cCCceEEEEecccccccCCCchhh------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~ 151 (313)
+++.+|+.+++......+. ..++ + ....+|..+.++++++++.+.+++|++|+||||||....+++ .+
T Consensus 45 ~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~ 123 (266)
T 3o38_A 45 LEGADVVISDYHERRLGET-RDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDE 123 (266)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHH
T ss_pred HCCCEEEEecCCHHHHHHH-HHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHH
Confidence 4577888877655443221 1111 1 224678889999999999999999999999999999877775 37
Q ss_pred hhhhhhhcccccHHHHHHHHhhcccCCCceE
Q psy2266 152 RAETTLATNFFALVTVCHILFPLLRPHARVV 182 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv 182 (313)
+|+.++++|+.|++.+++.++|.|++.+.--
T Consensus 124 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 154 (266)
T 3o38_A 124 EWDRVLNVTLTSVMRATRAALRYFRGVDHGG 154 (266)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHTSSCCE
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCe
Confidence 8999999999999999999999998765443
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=98.35 E-value=4.5e-07 Score=83.03 Aligned_cols=134 Identities=14% Similarity=0.095 Sum_probs=80.9
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccc
Q psy2266 111 FNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM 190 (313)
Q Consensus 111 ~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~ 190 (313)
.+|..++++++++++ ++|+++|||+... ....+.++..+++|+.|+..+++++.+.. ..++||++||..+.
T Consensus 59 ~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~-~~~~~~~~~~~~~nv~gt~~l~~aa~~~~-~~~~iV~~SS~~~~ 129 (322)
T 2p4h_X 59 NADLSNPDSFAAAIE-------GCVGIFHTASPID-FAVSEPEEIVTKRTVDGALGILKACVNSK-TVKRFIYTSSGSAV 129 (322)
T ss_dssp CCCTTCGGGGHHHHT-------TCSEEEECCCCC---------CHHHHHHHHHHHHHHHHHTTCS-SCCEEEEEEEGGGT
T ss_pred ecCCCCHHHHHHHHc-------CCCEEEEcCCccc-CCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccHHHc
Confidence 456677776666553 5799999996431 11123356699999999999999998752 23799999998754
Q ss_pred cccccChhhhhhhhccccchH---HHHHHHHHHHHHhhhcccccCCCCCC-chhhhHHHHHHHHHHHHhhhccCCCCCCe
Q psy2266 191 LYNVPSQELRQTLFNESLTED---QLLDMMTDYVQLAKEGKDKEAGWPEF-SYSVSKLGVAKLSFIQHATLSKDKRRPDI 266 (313)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~al~~l~~~~~~~l~~~~~~~gI 266 (313)
....... ...+++ +. ..+ ....+.. .|+.||.+...++ .++.++ +||
T Consensus 130 ~~~~~~~--------~~~~e~~~~~~-~~~-------------~~~~p~~~~Y~~sK~~~e~~~----~~~~~~---~gi 180 (322)
T 2p4h_X 130 SFNGKDK--------DVLDESDWSDV-DLL-------------RSVKPFGWNYAVSKTLAEKAV----LEFGEQ---NGI 180 (322)
T ss_dssp SCSSSCC--------SEECTTCCCCH-HHH-------------HHHCCTTHHHHHHHHHHHHHH----HHHHHH---TTC
T ss_pred ccCCCCC--------eecCCccccch-hhh-------------cccCcccccHHHHHHHHHHHH----HHHHHh---cCC
Confidence 3211000 000000 00 000 0001111 5999999777666 444321 389
Q ss_pred EEEeeccccccccccc
Q psy2266 267 IVNPVHPGYVNTDLTE 282 (313)
Q Consensus 267 ~vn~v~PG~v~T~~~~ 282 (313)
+++.+.||.|.+|...
T Consensus 181 ~~~~lrp~~v~g~~~~ 196 (322)
T 2p4h_X 181 DVVTLILPFIVGRFVC 196 (322)
T ss_dssp CEEEEEECEEESCCCS
T ss_pred cEEEEcCCceECCCCC
Confidence 9999999999998744
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=4.5e-07 Score=81.33 Aligned_cols=96 Identities=14% Similarity=0.032 Sum_probs=71.8
Q ss_pred HHHhcc-cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc---
Q psy2266 77 ILFPLL-RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF--- 149 (313)
Q Consensus 77 a~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~--- 149 (313)
+++..+ ++|.+|+.+++......+. ..+++ ....+|..++++++++++.+.+++|++|+||||||....+++
T Consensus 20 ~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~ 98 (254)
T 1hdc_A 20 EAARQAVAAGARVVLADVLDEEGAAT-ARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETE 98 (254)
T ss_dssp HHHHHHHHTTCEEEEEESCHHHHHHH-HHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGS
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhC
Confidence 343333 4577888777654332211 01111 124568889999999999999999999999999998776665
Q ss_pred -chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 -GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 -~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.++|+.++++|+.|++.+++.++|
T Consensus 99 ~~~~~~~~~~~N~~g~~~~~~~~~~ 123 (254)
T 1hdc_A 99 SVERFRKVVEINLTGVFIGMKTVIP 123 (254)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 368999999999999999999998
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.34 E-value=3.5e-07 Score=82.48 Aligned_cols=90 Identities=12% Similarity=0.058 Sum_probs=69.2
Q ss_pred cCCceEEEEecccccccCCCchhh-------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-CCc----
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-GSF---- 149 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~~~---- 149 (313)
++|.+|+.+++......+.. ..+ + ....+|..++++++++++.+.+++|++|+||||||.... +++
T Consensus 35 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~ 113 (267)
T 1iy8_A 35 AEGAKLSLVDVSSEGLEASK-AAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFT 113 (267)
T ss_dssp HTTCEEEEEESCHHHHHHHH-HHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSC
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCC
Confidence 45778887776543322211 111 1 124568889999999999999999999999999998765 554
Q ss_pred chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 ~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.++|+.++++|+.|++.+++.++|
T Consensus 114 ~~~~~~~~~~N~~g~~~~~~~~~~ 137 (267)
T 1iy8_A 114 AAEFDKVVSINLRGVFLGLEKVLK 137 (267)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHH
Confidence 378999999999999999999998
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=2.1e-06 Score=79.73 Aligned_cols=75 Identities=20% Similarity=0.147 Sum_probs=53.3
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.++.++.+|++|.+++.++++ ++|++||+||..... ...+++...+++|+.++..+++++.+. .-+++
T Consensus 79 ~~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~ 146 (351)
T 3ruf_A 79 SRFCFIEGDIRDLTTCEQVMK-------GVDHVLHQAALGSVP---RSIVDPITTNATNITGFLNILHAAKNA--QVQSF 146 (351)
T ss_dssp TTEEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEE
T ss_pred CceEEEEccCCCHHHHHHHhc-------CCCEEEECCccCCcc---hhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEE
Confidence 468889999999988777665 699999999974321 112566778888888888888876543 12366
Q ss_pred EEEeccc
Q psy2266 89 VNVASKL 95 (313)
Q Consensus 89 V~isS~~ 95 (313)
|++||..
T Consensus 147 v~~SS~~ 153 (351)
T 3ruf_A 147 TYAASSS 153 (351)
T ss_dssp EEEEEGG
T ss_pred EEEecHH
Confidence 6666643
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.33 E-value=5.2e-07 Score=81.74 Aligned_cols=71 Identities=11% Similarity=0.081 Sum_probs=65.0
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
..+|..++++++++++.+.+++|++|+||||||.....+..++|+.++++|+.|++.++++++|.|++.+.
T Consensus 79 ~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 149 (278)
T 3sx2_A 79 RQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGT 149 (278)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS
T ss_pred EeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 35688899999999999999999999999999998777777899999999999999999999999987654
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.33 E-value=5.2e-07 Score=81.79 Aligned_cols=99 Identities=18% Similarity=0.122 Sum_probs=73.4
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC--CCc
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP--GSF 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~--~~~ 149 (313)
++++..+ ++|.+|+.+++......+.. ..++ ....+|..++++++++++.+.+++|++|+|+||||.... .++
T Consensus 25 ~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~ 103 (271)
T 3tzq_B 25 LETSRVLARAGARVVLADLPETDLAGAA-ASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLV 103 (271)
T ss_dssp HHHHHHHHHTTCEEEEEECTTSCHHHHH-HHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCG
T ss_pred HHHHHHHHHCCCEEEEEcCCHHHHHHHH-HHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcc
Confidence 3343333 45778887776544332221 1111 224568889999999999999999999999999998743 333
Q ss_pred ----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 150 ----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 150 ----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
.++|+.++++|+.|++.++++++|.|
T Consensus 104 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 133 (271)
T 3tzq_B 104 TQMTVDVWDDTFTVNARGTMLMCKYAIPRL 133 (271)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 37899999999999999999999977
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.33 E-value=4.7e-07 Score=82.77 Aligned_cols=99 Identities=21% Similarity=0.177 Sum_probs=73.1
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PG 147 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~ 147 (313)
++++..+ ++|.+|+.+++......+.. .++ + ....+|..++++++++++.+.+++|++|+||||||... .+
T Consensus 22 ~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~ 100 (280)
T 3tox_A 22 RAAALLFAREGAKVVVTARNGNALAELT-DEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMG 100 (280)
T ss_dssp HHHHHHHHHTTCEEEECCSCHHHHHHHH-HHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSCS
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 3344333 45778777766544322211 111 1 12456888999999999999999999999999999873 35
Q ss_pred Cc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 148 SF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 148 ~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
++ .++|+.++++|+.|++.++++++|.|
T Consensus 101 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 132 (280)
T 3tox_A 101 EISSLSVEGWRETLDTNLTSAFLAAKYQVPAI 132 (280)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 54 37899999999999999999999976
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.33 E-value=4.1e-07 Score=82.75 Aligned_cols=90 Identities=18% Similarity=0.129 Sum_probs=68.9
Q ss_pred cCCceEEEEecccccccCCCchhh--------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCc-CCCCCc---
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL--------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMD-TAPGSF--- 149 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~--------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~-~~~~~~--- 149 (313)
++|.+|+.+++......+. ..++ + ....+|..++++++++++.+.+++|++|+||||||. ...+++
T Consensus 33 ~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~ 111 (281)
T 3svt_A 33 AAGASVMIVGRNPDKLAGA-VQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQV 111 (281)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGC
T ss_pred HCCCEEEEEeCCHHHHHHH-HHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccC
Confidence 5577888777654332221 1111 1 124568889999999999999999999999999998 444554
Q ss_pred -chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 -GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 -~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.++|+.++++|+.|++.++++++|
T Consensus 112 ~~~~~~~~~~vN~~g~~~~~~~~~~ 136 (281)
T 3svt_A 112 DSEAWRRTVDLNVNGTMYVLKHAAR 136 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 378999999999999999999998
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=98.33 E-value=1.1e-06 Score=79.50 Aligned_cols=87 Identities=10% Similarity=0.145 Sum_probs=70.0
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLA 158 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~ 158 (313)
++|.+|+.+++.... ........+|..++++++++++.+.+++|++|+||||||....+++ .++|+.+++
T Consensus 30 ~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (264)
T 2dtx_A 30 DEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIID 103 (264)
T ss_dssp HTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred HCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 457788877664432 0011224578889999999999999999999999999998776664 368999999
Q ss_pred cccccHHHHHHHHhhcc
Q psy2266 159 TNFFALVTVCHILFPLL 175 (313)
Q Consensus 159 ~N~~g~~~~~~~~~p~l 175 (313)
+|+.|++.++++++|.|
T Consensus 104 ~N~~g~~~l~~~~~~~~ 120 (264)
T 2dtx_A 104 VNLFGYYYASKFAIPYM 120 (264)
T ss_dssp HHTHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHH
Confidence 99999999999999977
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=98.33 E-value=4.8e-07 Score=81.08 Aligned_cols=92 Identities=21% Similarity=0.165 Sum_probs=70.4
Q ss_pred cCCceEEEEecccccccCCCchhhh-------hhhcccC--CCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CCCc---
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR-------QTLFNES--LTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PGSF--- 149 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~-------~~~~~d~--~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~~~--- 149 (313)
++|.+|+.+++......+... .+. ....+|. .+.++++++++.+.+++|++|+||||||... ..++
T Consensus 34 ~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~ 112 (252)
T 3f1l_A 34 RYGATVILLGRNEEKLRQVAS-HINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQ 112 (252)
T ss_dssp HTTCEEEEEESCHHHHHHHHH-HHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTC
T ss_pred HCCCEEEEEeCCHHHHHHHHH-HHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccC
Confidence 557788887765544332211 111 1245677 7899999999999999999999999999853 3444
Q ss_pred -chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 150 -GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 150 -~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
.++|+.++++|+.|++.++++++|.|
T Consensus 113 ~~~~~~~~~~~N~~g~~~~~~~~~~~m 139 (252)
T 3f1l_A 113 NPQVWQDVMQVNVNATFMLTQALLPLL 139 (252)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 37899999999999999999999977
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.33 E-value=5.9e-07 Score=80.58 Aligned_cols=98 Identities=15% Similarity=0.112 Sum_probs=73.2
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhh-hhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQEL-RQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF---- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~---- 149 (313)
++++..+ ++|.+|+.+++.... .+. ...+ .....+|..++++++++++.+.+++|++|+||||||....+++
T Consensus 20 ~~ia~~l~~~G~~V~~~~r~~~~-~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~ 97 (256)
T 2d1y_A 20 RAIAQAFAREGALVALCDLRPEG-KEV-AEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVR 97 (256)
T ss_dssp HHHHHHHHHTTCEEEEEESSTTH-HHH-HHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCC
T ss_pred HHHHHHHHHCCCEEEEEeCChhH-HHH-HHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCC
Confidence 3344333 457788777665432 111 1111 1234578889999999999999999999999999998776665
Q ss_pred chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 150 GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 150 ~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
.++|+.++++|+.|++.++++++|.|
T Consensus 98 ~~~~~~~~~~N~~g~~~~~~~~~~~m 123 (256)
T 2d1y_A 98 LPEWRRVLEVNLTAPMHLSALAAREM 123 (256)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 36899999999999999999999977
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=1.1e-06 Score=78.41 Aligned_cols=91 Identities=11% Similarity=-0.017 Sum_probs=69.0
Q ss_pred cCCceEEEEeccc-ccccC-CCchhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhh
Q psy2266 83 RPHARVVNVASKL-GMLYN-VPSQELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAET 155 (313)
Q Consensus 83 ~~~g~IV~isS~~-~~~~~-~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~ 155 (313)
++|.+|+.+++.. ....+ ....+.+ ....+|..++++++++++.+.+++|++|+||||||....+++ .++|+.
T Consensus 29 ~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~ 108 (249)
T 2ew8_A 29 VEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKK 108 (249)
T ss_dssp HTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHH
T ss_pred HCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHH
Confidence 4577888776654 22211 0000001 124568889999999999999999999999999998877765 368999
Q ss_pred hhhcccccHHHHHHHHhh
Q psy2266 156 TLATNFFALVTVCHILFP 173 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p 173 (313)
++++|+.|++.++++++|
T Consensus 109 ~~~~N~~g~~~~~~~~~~ 126 (249)
T 2ew8_A 109 TFEINVDSGFLMAKAFVP 126 (249)
T ss_dssp HHHHHTHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHH
Confidence 999999999999999998
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.32 E-value=7.9e-07 Score=79.36 Aligned_cols=64 Identities=16% Similarity=0.090 Sum_probs=58.4
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..+.++++++++.+.+++|++|+||||||.....++ .++|+.++++|+.|++.+++.++|
T Consensus 68 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 135 (256)
T 3ezl_A 68 SEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVID 135 (256)
T ss_dssp EECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3568889999999999999999999999999999877665 378999999999999999999998
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.9e-06 Score=80.74 Aligned_cols=122 Identities=16% Similarity=0.103 Sum_probs=79.3
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLG 189 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~ 189 (313)
..+|..+.++++++ ..+++|++|||||.... ..++++..+++|+.|+..+++++.. .+++||++||...
T Consensus 73 ~~~Dl~d~~~~~~~------~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~---~~~~~V~~SS~~v 141 (362)
T 3sxp_A 73 IAADINNPLDLRRL------EKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARS---KKAKVIYASSAGV 141 (362)
T ss_dssp EECCTTCHHHHHHH------TTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHH---TTCEEEEEEEGGG
T ss_pred EECCCCCHHHHHHh------hccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHH---cCCcEEEeCcHHH
Confidence 45677788877765 45789999999995433 4477889999999999999998843 3456999999554
Q ss_pred ccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEE-
Q psy2266 190 MLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIV- 268 (313)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~v- 268 (313)
.-.. .. ..+++ ....+...|+.||.+...+++.++.+ +....||.
T Consensus 142 yg~~-~~----------~~~E~-------------------~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~lR~~ 187 (362)
T 3sxp_A 142 YGNT-KA----------PNVVG-------------------KNESPENVYGFSKLCMDEFVLSHSND----NVQVGLRYF 187 (362)
T ss_dssp GCSC-CS----------SBCTT-------------------SCCCCSSHHHHHHHHHHHHHHHTTTT----SCEEEEEEC
T ss_pred hCCC-CC----------CCCCC-------------------CCCCCCChhHHHHHHHHHHHHHHhcc----CCEEEEEeC
Confidence 3211 00 00000 01234456999999999999554433 22224555
Q ss_pred Eeeccccc
Q psy2266 269 NPVHPGYV 276 (313)
Q Consensus 269 n~v~PG~v 276 (313)
+.+.||..
T Consensus 188 ~v~Gp~~~ 195 (362)
T 3sxp_A 188 NVYGPREF 195 (362)
T ss_dssp SEESTTCG
T ss_pred ceeCcCCC
Confidence 44445543
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.32 E-value=5.9e-07 Score=82.83 Aligned_cols=104 Identities=13% Similarity=0.169 Sum_probs=79.3
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++......+.. ..+. ....+|..+.++++++++.+.+.+|++|+||||||....++
T Consensus 45 ~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~ 123 (301)
T 3tjr_A 45 LATATEFARRGARLVLSDVDQPALEQAV-NGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGP 123 (301)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCC
Confidence 3444333 45778887776554432221 1111 12457888999999999999999999999999999987777
Q ss_pred c----chhhhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 149 F----GQRAETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 149 ~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
+ .++|+.++++|+.|++.++++++|.|++.+.
T Consensus 124 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 159 (301)
T 3tjr_A 124 LAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGT 159 (301)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS
T ss_pred cccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC
Confidence 5 3789999999999999999999999987654
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.31 E-value=2.8e-06 Score=78.23 Aligned_cols=154 Identities=10% Similarity=-0.004 Sum_probs=96.1
Q ss_pred cCCceEEEEecccccccCCCchh----hh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQE----LR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTL 157 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~----~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~ 157 (313)
+++..|+.+++............ .+ ....+|..+.++++++++.. ++|+++||||........++++..+
T Consensus 36 ~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~~~~~~~~~~~~ 110 (335)
T 1rpn_A 36 EKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQEVYNLAAQSFVGASWNQPVTTG 110 (335)
T ss_dssp HTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHHHHTTSHHHHH
T ss_pred HCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-----CCCEEEECccccchhhhhhChHHHH
Confidence 34678877776443211000000 11 12356777888888777665 7999999999654332345678899
Q ss_pred hcccccHHHHHHHHhhcccC-CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCC
Q psy2266 158 ATNFFALVTVCHILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPE 236 (313)
Q Consensus 158 ~~N~~g~~~~~~~~~p~l~~-~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
++|+.|+..+++++.+. + .+++|++||........ .. ..++ .....+.
T Consensus 111 ~~n~~~~~~l~~a~~~~--~~~~~~v~~SS~~v~g~~~-~~---------~~~E-------------------~~~~~p~ 159 (335)
T 1rpn_A 111 VVDGLGVTHLLEAIRQF--SPETRFYQASTSEMFGLIQ-AE---------RQDE-------------------NTPFYPR 159 (335)
T ss_dssp HHHTHHHHHHHHHHHHH--CTTSEEEEEEEGGGGCSCS-SS---------SBCT-------------------TSCCCCC
T ss_pred HHHHHHHHHHHHHHHHh--CCCCeEEEEeCHHHhCCCC-CC---------CCCc-------------------ccCCCCC
Confidence 99999999999988763 2 37999999976543110 00 0000 0012234
Q ss_pred CchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccc
Q psy2266 237 FSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD 279 (313)
Q Consensus 237 ~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~ 279 (313)
..|+.||.+.+.+++.++.+. |+.+..+.|+.+-.|
T Consensus 160 ~~Y~~sK~~~e~~~~~~~~~~-------~~~~~i~r~~~v~Gp 195 (335)
T 1rpn_A 160 SPYGVAKLYGHWITVNYRESF-------GLHASSGILFNHESP 195 (335)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECCEECT
T ss_pred ChhHHHHHHHHHHHHHHHHHc-------CCcEEEEeeCcccCC
Confidence 569999999999997766543 466666666655433
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=5.1e-07 Score=81.12 Aligned_cols=97 Identities=14% Similarity=0.080 Sum_probs=71.8
Q ss_pred HHHHhcc-cCCceEEEEeccccc-ccCCCchhh------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGM-LYNVPSQEL------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP 146 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~-~~~~~~~~~------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~ 146 (313)
++++..+ ++|.+|+.+++.... .... ...+ + ....+|..++++++++++.+.+++|++|+||||||....
T Consensus 18 ~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~ 96 (260)
T 1x1t_A 18 LGIATALAAQGADIVLNGFGDAAEIEKV-RAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHT 96 (260)
T ss_dssp HHHHHHHHHTTCEEEEECCSCHHHHHHH-HHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCC
T ss_pred HHHHHHHHHcCCEEEEEeCCcchHHHHH-HHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 3344333 457788777654432 2111 1111 1 123568889999999999999999999999999998776
Q ss_pred CCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 147 GSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 147 ~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+++ .++|+.++++|+.|++.++++++|
T Consensus 97 ~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 127 (260)
T 1x1t_A 97 ALIEDFPTEKWDAILALNLSAVFHGTAAALP 127 (260)
T ss_dssp CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665 378999999999999999999998
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.31 E-value=4.3e-07 Score=82.93 Aligned_cols=69 Identities=13% Similarity=0.102 Sum_probs=58.9
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCc--CCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMD--TAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~--~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
..+|..++++++++++.+.+++|++|+||||||. ...+++ .++|+.++++|+.|++.++++++|.|+++
T Consensus 84 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 158 (280)
T 4da9_A 84 LRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLAS 158 (280)
T ss_dssp EECCTTSGGGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 4568889999999999999999999999999998 445554 37899999999999999999999999763
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.30 E-value=7.3e-07 Score=80.91 Aligned_cols=71 Identities=20% Similarity=0.155 Sum_probs=64.4
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
..+|..+.++++++++.+.+++|++|+||||||....+++ .++|+.++++|+.|++.++++++|.|+++++
T Consensus 78 ~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~ 152 (277)
T 3tsc_A 78 AVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGR 152 (277)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC
Confidence 3568889999999999999999999999999999887775 3789999999999999999999999987654
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.30 E-value=5.7e-07 Score=81.46 Aligned_cols=99 Identities=17% Similarity=0.192 Sum_probs=74.1
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhh----h---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQEL----R---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG 147 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~----~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~ 147 (313)
++++..+ ++|.+|+.+++........ ...+ + ....+|..++++++++++.+.+++|++|+||||||....+
T Consensus 35 ~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~ 113 (267)
T 1vl8_A 35 FGIAQGLAEAGCSVVVASRNLEEASEA-AQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRH 113 (267)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 3344333 4577888777654332221 1111 1 1245688899999999999999999999999999998777
Q ss_pred Ccc----hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 148 SFG----QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 148 ~~~----~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
++. ++|+.++++|+.|++.++++++|.|
T Consensus 114 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m 145 (267)
T 1vl8_A 114 PAEEFPLDEFRQVIEVNLFGTYYVCREAFSLL 145 (267)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 653 6899999999999999999999977
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.30 E-value=5.1e-07 Score=80.84 Aligned_cols=99 Identities=16% Similarity=0.107 Sum_probs=73.3
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc--
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF-- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~-- 149 (313)
++++..+ +++.+|+.+++......+.. .+++ ....+|..++++++++++.+.+++|++|+||||||....+++
T Consensus 20 ~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~ 98 (253)
T 1hxh_A 20 LEVVKLLLGEGAKVAFSDINEAAGQQLA-AELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMET 98 (253)
T ss_dssp HHHHHHHHHTTCEEEEECSCHHHHHHHH-HHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTT
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCccc
Confidence 3344333 45778777766443322111 1111 124568889999999999999999999999999998766654
Q ss_pred --chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 150 --GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 150 --~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
.++|+.++++|+.|++.+++.++|.|
T Consensus 99 ~~~~~~~~~~~~N~~~~~~~~~~~~~~~ 126 (253)
T 1hxh_A 99 GRLEDFSRLLKINTESVFIGCQQGIAAM 126 (253)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhhcHHHHHHHHHHHHHH
Confidence 37899999999999999999999977
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=98.30 E-value=8.5e-07 Score=80.11 Aligned_cols=64 Identities=13% Similarity=0.109 Sum_probs=58.5
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..+.++++++++.+.+++|++|+||||||.....++ .++|+.++++|+.|++.+++.++|
T Consensus 80 ~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 147 (269)
T 3gk3_A 80 YAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIA 147 (269)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4578889999999999999999999999999999877664 378999999999999999999998
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.30 E-value=6.3e-07 Score=82.56 Aligned_cols=90 Identities=13% Similarity=0.145 Sum_probs=69.8
Q ss_pred cCCceEEEEecccccccCCCchhh--------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC--c--
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL--------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS--F-- 149 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~--------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~--~-- 149 (313)
++|.+|+.+++......+.. ..+ + ....+|..++++++++++.+.+++|++|+||||||....++ +
T Consensus 48 ~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~ 126 (297)
T 1xhl_A 48 KEGAQVTITGRNEDRLEETK-QQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTD 126 (297)
T ss_dssp HTTCEEEEEESCHHHHHHHH-HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGG
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCcccc
Confidence 45778888776543322211 111 1 12456888999999999999999999999999999876666 4
Q ss_pred --chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 --GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 --~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.++|+.++++|+.|++.++++++|
T Consensus 127 ~~~~~~~~~~~vN~~g~~~l~~~~~~ 152 (297)
T 1xhl_A 127 QPVELYQKTFKLNFQAVIEMTQKTKE 152 (297)
T ss_dssp SCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence 378999999999999999999998
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.30 E-value=6.8e-07 Score=80.01 Aligned_cols=95 Identities=15% Similarity=0.146 Sum_probs=73.9
Q ss_pred cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CCCc----chhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PGSF----GQRAE 154 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~~~----~~~~~ 154 (313)
+++.+|+.+++......+... ++. ....+|..+.++++++++.+.+++|++|+||||||... ..++ .++|+
T Consensus 31 ~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~ 109 (261)
T 3n74_A 31 KGGAKVVIVDRDKAGAERVAG-EIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFD 109 (261)
T ss_dssp HTTCEEEEEESCHHHHHHHHH-HHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHH
T ss_pred HCCCEEEEEcCCHHHHHHHHH-HhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHH
Confidence 457788888766544332211 111 22467888999999999999999999999999999875 4444 37899
Q ss_pred hhhhcccccHHHHHHHHhhcccCC
Q psy2266 155 TTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 155 ~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
.++++|+.|++.+++.++|.|++.
T Consensus 110 ~~~~~N~~g~~~l~~~~~~~~~~~ 133 (261)
T 3n74_A 110 RIVGVNVRGVYLMTSKLIPHFKEN 133 (261)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999763
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.29 E-value=8.3e-07 Score=80.29 Aligned_cols=91 Identities=19% Similarity=0.228 Sum_probs=65.4
Q ss_pred cCCceEEEEecccccccCCCch-------hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC------
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQ-------ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS------ 148 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~-------~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~------ 148 (313)
++|.+|+.+++......+.... ..+ ....+|..++++++++++.+.+++|++|+||||||....++
T Consensus 28 ~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~ 107 (278)
T 1spx_A 28 REGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGT 107 (278)
T ss_dssp HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC------------
T ss_pred HCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccc
Confidence 4577888877654433221100 111 22457888999999999999999999999999999876554
Q ss_pred --cchhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 --FGQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 --~~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..++|+.++++|+.|++.+++.++|
T Consensus 108 ~~~~~~~~~~~~~N~~g~~~l~~~~~~ 134 (278)
T 1spx_A 108 AQSIESYDATLNLNLRSVIALTKKAVP 134 (278)
T ss_dssp -CCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3467999999999999999999998
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.29 E-value=6.6e-07 Score=81.33 Aligned_cols=90 Identities=18% Similarity=0.189 Sum_probs=69.7
Q ss_pred cCCceEEEEecccccccCCCchhh--------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC----c
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL--------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS----F 149 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~--------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~----~ 149 (313)
++|.+|+.+++......+.. ..+ + ....+|..++++++++++.+.+++|++|+||||||....++ +
T Consensus 28 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~ 106 (280)
T 1xkq_A 28 QEGANVTITGRSSERLEETR-QIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTG 106 (280)
T ss_dssp HTTCEEEEEESCHHHHHHHH-HHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCG
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCccc
Confidence 45778888776544332211 111 1 22457888999999999999999999999999999876665 3
Q ss_pred ----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 ----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 ----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.++|+.++++|+.|++.+++.++|
T Consensus 107 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 134 (280)
T 1xkq_A 107 TDQGIDIYHKTLKLNLQAVIEMTKKVKP 134 (280)
T ss_dssp GGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 367999999999999999999998
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.29 E-value=8.9e-07 Score=78.85 Aligned_cols=64 Identities=14% Similarity=0.186 Sum_probs=58.1
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..++++++++++.+.+++|++|+||||||....+++ .++|+.++++|+.|++.+++.++|
T Consensus 59 ~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 126 (246)
T 2uvd_A 59 VRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSR 126 (246)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4568889999999999999999999999999998876665 368999999999999999999998
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.29 E-value=1.7e-06 Score=77.21 Aligned_cols=86 Identities=13% Similarity=0.066 Sum_probs=69.1
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLA 158 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~ 158 (313)
++|.+|+.+++.... ... + -....+|..++++++++++.+.+++|++|+||||||....+++ .++|+.+++
T Consensus 29 ~~G~~V~~~~r~~~~-~~~---~-~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (250)
T 2fwm_X 29 EAGAKVTGFDQAFTQ-EQY---P-FATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFA 103 (250)
T ss_dssp HTTCEEEEEESCCCS-SCC---S-SEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred HCCCEEEEEeCchhh-hcC---C-ceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 457788877765432 111 1 2234578889999999999999999999999999998776664 378999999
Q ss_pred cccccHHHHHHHHhh
Q psy2266 159 TNFFALVTVCHILFP 173 (313)
Q Consensus 159 ~N~~g~~~~~~~~~p 173 (313)
+|+.|++.++++++|
T Consensus 104 ~N~~g~~~~~~~~~~ 118 (250)
T 2fwm_X 104 VNVGGAFNLFQQTMN 118 (250)
T ss_dssp HHTHHHHHHHHHHHH
T ss_pred HccHHHHHHHHHHHH
Confidence 999999999999998
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.29 E-value=5.6e-07 Score=80.62 Aligned_cols=97 Identities=11% Similarity=0.047 Sum_probs=72.1
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++......+.. ..+. ....+|..++++++++++.+.+++|++|+||||||....++
T Consensus 16 ~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 94 (256)
T 1geg_A 16 KAIALRLVKDGFAVAIADYNDATAKAVA-SEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTP 94 (256)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBC
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 3344333 45778887766543322111 1111 12456888999999999999999999999999999877666
Q ss_pred c----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 F----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 ~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+ .++|+.++++|+.|++.++++++|
T Consensus 95 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 123 (256)
T 1geg_A 95 IESITPEIVDKVYNINVKGVIWGIQAAVE 123 (256)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 5 368999999999999999999998
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.29 E-value=6.2e-07 Score=81.68 Aligned_cols=102 Identities=18% Similarity=0.183 Sum_probs=76.0
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhh----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQEL----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~ 149 (313)
++++..+ ++|.+|+.+++......+. ...+ + ....+|..++++++++++.+.+++|++|+||||||....+++
T Consensus 43 ~aia~~L~~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 121 (276)
T 2b4q_A 43 QMIAQGLLEAGARVFICARDAEACADT-ATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAAL 121 (276)
T ss_dssp HHHHHHHHHTTCEEEEECSCHHHHHHH-HHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCT
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCc
Confidence 3444433 4577888776654332211 0111 1 124568889999999999999999999999999998776654
Q ss_pred ----chhhhhhhhcccccHHHHHHHHhhcccCC
Q psy2266 150 ----GQRAETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 150 ----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
.++|+.++++|+.|++.++++++|.|++.
T Consensus 122 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 154 (276)
T 2b4q_A 122 ESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRS 154 (276)
T ss_dssp TSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 37899999999999999999999999754
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=6.5e-07 Score=80.66 Aligned_cols=90 Identities=14% Similarity=0.011 Sum_probs=69.5
Q ss_pred cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAET 155 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~ 155 (313)
++|.+|+.+++........ ...+. ....+|..++++++++++.+.+++|++|+||||||....+++ .++|+.
T Consensus 29 ~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~ 107 (260)
T 1nff_A 29 AEGAKVVFGDILDEEGKAM-AAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQR 107 (260)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHH
T ss_pred HCCCEEEEEeCCHHHHHHH-HHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHH
Confidence 4577888776654332211 11111 124568889999999999999999999999999998776654 368999
Q ss_pred hhhcccccHHHHHHHHhh
Q psy2266 156 TLATNFFALVTVCHILFP 173 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p 173 (313)
++++|+.|++.+++.++|
T Consensus 108 ~~~~N~~g~~~~~~~~~~ 125 (260)
T 1nff_A 108 ILDVNLTGVFLGIRAVVK 125 (260)
T ss_dssp HHHHHTHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHH
Confidence 999999999999999998
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.28 E-value=8.3e-07 Score=80.64 Aligned_cols=71 Identities=14% Similarity=0.152 Sum_probs=64.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
..+|..++++++++++.+.+++|++|+||||||....+++ .++|+.++++|+.|++.++++++|.|++.+.
T Consensus 82 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 156 (280)
T 3pgx_A 82 RVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGN 156 (280)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 3568889999999999999999999999999999887775 3789999999999999999999999987653
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=98.28 E-value=6.4e-07 Score=80.34 Aligned_cols=90 Identities=6% Similarity=-0.024 Sum_probs=69.1
Q ss_pred cCCceEEEEeccccc--ccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----c
Q psy2266 83 RPHARVVNVASKLGM--LYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----G 150 (313)
Q Consensus 83 ~~~g~IV~isS~~~~--~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~ 150 (313)
++|.+|+.+++.... ..+. ...+ + ....+|..++++++++++.+.+++|++|+||||||....+++ .
T Consensus 24 ~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~ 102 (258)
T 3a28_C 24 ADGFDIAVADLPQQEEQAAET-IKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTE 102 (258)
T ss_dssp HHTCEEEEEECGGGHHHHHHH-HHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCH
T ss_pred HCCCEEEEEeCCcchHHHHHH-HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCH
Confidence 347788777665432 1111 1111 1 124568889999999999999999999999999999877765 3
Q ss_pred hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++|+.++++|+.|++.+++.++|
T Consensus 103 ~~~~~~~~~N~~g~~~~~~~~~~ 125 (258)
T 3a28_C 103 EDLKQIYSVNVFSVFFGIQAASR 125 (258)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHH
Confidence 68999999999999999999998
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.27 E-value=1.1e-06 Score=78.88 Aligned_cols=100 Identities=12% Similarity=0.125 Sum_probs=71.8
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCch-----hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccC--cCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQ-----ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAM--DTAP 146 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~-----~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~--~~~~ 146 (313)
++++..+ ++|.+++.+.+......+...+ +.+ ....+|..++++++++++.+.+++|++|+|||||| ....
T Consensus 21 ~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~ 100 (264)
T 3i4f_A 21 KQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFER 100 (264)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCSC
T ss_pred HHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCC
Confidence 3444333 4577888775543221111011 111 12457888999999999999999999999999999 4444
Q ss_pred CCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 147 GSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 147 ~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
.++ .++|+.++++|+.|++.++++++|.|
T Consensus 101 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 133 (264)
T 3i4f_A 101 KKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVM 133 (264)
T ss_dssp CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CccccCCHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 554 37899999999999999999999976
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.27 E-value=9.9e-07 Score=78.28 Aligned_cols=90 Identities=12% Similarity=0.123 Sum_probs=70.6
Q ss_pred cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
++|.+|+.+++......... ..+ + ....+|..++++++++++.+.+++|++|+||||||....+++ .++
T Consensus 27 ~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~ 105 (247)
T 3lyl_A 27 SKGATVVGTATSQASAEKFE-NSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDE 105 (247)
T ss_dssp HTTCEEEEEESSHHHHHHHH-HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHH
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHH
Confidence 45778888776554332221 111 1 124568889999999999999999999999999999877765 378
Q ss_pred hhhhhhcccccHHHHHHHHhh
Q psy2266 153 AETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p 173 (313)
|+.++++|+.|++.+++.++|
T Consensus 106 ~~~~~~~n~~~~~~l~~~~~~ 126 (247)
T 3lyl_A 106 WQSVINTNLSSIFRMSKECVR 126 (247)
T ss_dssp HHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHH
Confidence 999999999999999999998
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.27 E-value=6.6e-07 Score=81.07 Aligned_cols=91 Identities=15% Similarity=0.236 Sum_probs=70.5
Q ss_pred cCCceEEEEecccccccCCCchh-hh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQE-LR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETT 156 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~-~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~ 156 (313)
++|.+|+.+++......+..... .+ ....+|..+.++++++++.+.+++|++|+|+||||....+++ .++|+.+
T Consensus 27 ~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~ 106 (281)
T 3m1a_A 27 AAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDL 106 (281)
T ss_dssp HTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHH
T ss_pred HCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHH
Confidence 45778888877654433221110 01 224568889999999999999999999999999998766654 3789999
Q ss_pred hhcccccHHHHHHHHhh
Q psy2266 157 LATNFFALVTVCHILFP 173 (313)
Q Consensus 157 ~~~N~~g~~~~~~~~~p 173 (313)
+++|+.|++.+++.++|
T Consensus 107 ~~~N~~g~~~~~~~~~~ 123 (281)
T 3m1a_A 107 FELHVFGPARLTRALLP 123 (281)
T ss_dssp HHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999998
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.27 E-value=2.2e-06 Score=77.57 Aligned_cols=91 Identities=9% Similarity=0.099 Sum_probs=65.3
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhh
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAE 154 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~ 154 (313)
++++..+ +++..|+.+++. .+|..+.++++++++.. ++|+++||||........++++
T Consensus 26 ~~l~~~L~~~g~~V~~~~r~----------------~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~~~~~~~~~ 84 (292)
T 1vl0_A 26 REIQKQLKGKNVEVIPTDVQ----------------DLDITNVLAVNKFFNEK-----KPNVVINCAAHTAVDKCEEQYD 84 (292)
T ss_dssp HHHHHHHTTSSEEEEEECTT----------------TCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHHHHHHCHH
T ss_pred HHHHHHHHhCCCeEEeccCc----------------cCCCCCHHHHHHHHHhc-----CCCEEEECCccCCHHHHhcCHH
Confidence 3444444 346677766653 24667777777766654 7999999999754332346788
Q ss_pred hhhhcccccHHHHHHHHhhcccCCCceEEecCCccc
Q psy2266 155 TTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM 190 (313)
Q Consensus 155 ~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~ 190 (313)
..+++|+.|+..+++++.+. +.++|++||....
T Consensus 85 ~~~~~nv~~~~~l~~a~~~~---~~~iv~~SS~~v~ 117 (292)
T 1vl0_A 85 LAYKINAIGPKNLAAAAYSV---GAEIVQISTDYVF 117 (292)
T ss_dssp HHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHc---CCeEEEechHHeE
Confidence 99999999999999998772 3499999998654
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=1.1e-06 Score=79.22 Aligned_cols=71 Identities=11% Similarity=0.111 Sum_probs=63.5
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
..+|..++++++++++.+.+++|++|+||||||....+++ .++|+.++++|+.|++.+++.++|.|.+...
T Consensus 81 ~~~Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 155 (267)
T 4iiu_A 81 LSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ 155 (267)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred EEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 4568889999999999999999999999999999887775 3789999999999999999999998876443
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=98.27 E-value=3.9e-06 Score=72.75 Aligned_cols=36 Identities=8% Similarity=-0.017 Sum_probs=26.7
Q ss_pred CCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccc
Q psy2266 236 EFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD 279 (313)
Q Consensus 236 ~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~ 279 (313)
...|+.+|.+...+. .+. +..|++++.|.||++.++
T Consensus 129 ~~~y~~sK~~~e~~~-----~~~---~~~~i~~~ivrp~~v~g~ 164 (224)
T 3h2s_A 129 QPWYDGALYQYYEYQ-----FLQ---MNANVNWIGISPSEAFPS 164 (224)
T ss_dssp STTHHHHHHHHHHHH-----HHT---TCTTSCEEEEEECSBCCC
T ss_pred chhhHHHHHHHHHHH-----HHH---hcCCCcEEEEcCccccCC
Confidence 345999999887542 222 124899999999999887
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=98.27 E-value=7.2e-07 Score=83.04 Aligned_cols=95 Identities=8% Similarity=0.028 Sum_probs=74.7
Q ss_pred cCCceEEEEecccccccCCCch----h---hhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----h
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQ----E---LRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----Q 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~----~---~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~ 151 (313)
++|.+|+.+++........... + .-....+|..++++++++++.+.+.+|++|+||||||....+++. +
T Consensus 30 ~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~ 109 (319)
T 3ioy_A 30 NQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYD 109 (319)
T ss_dssp HTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHH
T ss_pred HCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHH
Confidence 4577888777665443322111 0 111245688899999999999999999999999999998777753 7
Q ss_pred hhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 152 RAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
+|+.++++|+.|++.+++.++|.|++
T Consensus 110 ~~~~~~~~N~~g~~~l~~~~~~~~~~ 135 (319)
T 3ioy_A 110 DWDWLLGVNLHGVVNGVTTFVPRMVE 135 (319)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999864
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=98.26 E-value=1.2e-06 Score=79.30 Aligned_cols=91 Identities=12% Similarity=0.098 Sum_probs=69.8
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~ 152 (313)
++|.+++.+++......+.....+. ....+|..++++++++++.+.+.+|++|+||||||....+++. ++
T Consensus 51 ~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~ 130 (271)
T 4iin_A 51 SMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTED 130 (271)
T ss_dssp HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHH
T ss_pred HCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHH
Confidence 4577888777633221111111111 1245688899999999999999999999999999998877653 78
Q ss_pred hhhhhhcccccHHHHHHHHhh
Q psy2266 153 AETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p 173 (313)
|+.++++|+.|++.+++.++|
T Consensus 131 ~~~~~~~N~~g~~~l~~~~~~ 151 (271)
T 4iin_A 131 FHHVIDNNLTSAFIGCREALK 151 (271)
T ss_dssp HHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHH
Confidence 999999999999999999998
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=8.8e-07 Score=80.77 Aligned_cols=97 Identities=10% Similarity=0.066 Sum_probs=70.6
Q ss_pred HHHhcc-cCCceEEEEecccccccCCCchh-hh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC-Cc---
Q psy2266 77 ILFPLL-RPHARVVNVASKLGMLYNVPSQE-LR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG-SF--- 149 (313)
Q Consensus 77 a~~~~m-~~~g~IV~isS~~~~~~~~~~~~-~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~-~~--- 149 (313)
+++..+ ++|.+|+.+++......+..... .+ ....+|..+.++++++++.+.+++|++|+||||||..... ++
T Consensus 20 aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~ 99 (281)
T 3zv4_A 20 ALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADL 99 (281)
T ss_dssp HHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGS
T ss_pred HHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCccccccccC
Confidence 343333 55778888776544332221110 01 2245688899999999999999999999999999986543 22
Q ss_pred -----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 -----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 -----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.+.|+.++++|+.|++.++++++|
T Consensus 100 ~~~~~~~~~~~~~~vN~~g~~~~~~~~~~ 128 (281)
T 3zv4_A 100 PEDKIDAAFDDIFHVNVKGYIHAVKACLP 128 (281)
T ss_dssp CTTTHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ChhhhHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 246999999999999999999998
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.25 E-value=3.2e-07 Score=82.30 Aligned_cols=94 Identities=10% Similarity=-0.029 Sum_probs=69.1
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC--------cchhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS--------FGQRAE 154 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~--------~~~~~~ 154 (313)
++|.+|+.+++......+.- ........+|..++++++++++.+.+ +|++|+||||||.....+ ..++|+
T Consensus 31 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (257)
T 3tl3_A 31 DAGAQVVVLDIRGEDVVADL-GDRARFAAADVTDEAAVASALDLAET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFR 108 (257)
T ss_dssp HHTCEEEEEESSCHHHHHHT-CTTEEEEECCTTCHHHHHHHHHHHHH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHH
T ss_pred HCCCEEEEEeCchHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCCcccccccccCCHHHHH
Confidence 45778887766322111000 00012246788899999999998877 999999999999864332 347899
Q ss_pred hhhhcccccHHHHHHHHhhcccCC
Q psy2266 155 TTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 155 ~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
.++++|+.|++.++++++|.|++.
T Consensus 109 ~~~~vN~~g~~~l~~~~~~~~~~~ 132 (257)
T 3tl3_A 109 KIVDINLVGSFNVLRLAAERIAKT 132 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHccHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999764
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=6.9e-07 Score=80.26 Aligned_cols=90 Identities=17% Similarity=0.169 Sum_probs=69.5
Q ss_pred cCCceEEEEecccccccCCCchhh------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~ 151 (313)
++|.+|+.+++......+. ...+ + ....+|..++++++++++.+.+++|++|+||||||....+++ .+
T Consensus 29 ~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~ 107 (263)
T 3ai3_A 29 KEGAHIVLVARQVDRLHEA-ARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADE 107 (263)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHH
T ss_pred HCCCEEEEEcCCHHHHHHH-HHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHH
Confidence 4577888777654332221 1111 1 124568889999999999999999999999999998776664 36
Q ss_pred hhhhhhhcccccHHHHHHHHhh
Q psy2266 152 RAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+|+.++++|+.|++.++++++|
T Consensus 108 ~~~~~~~~n~~~~~~~~~~~~~ 129 (263)
T 3ai3_A 108 KWQFYWELLVMAAVRLARGLVP 129 (263)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHH
Confidence 8999999999999999999998
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=98.25 E-value=5.1e-07 Score=83.47 Aligned_cols=75 Identities=15% Similarity=0.138 Sum_probs=47.8
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.++.++++|++|.++++++++ ++|+|||+||.... ...+..++.+++|+.+++.+++++.+.. .-+++
T Consensus 59 ~~~~~~~~Dl~d~~~~~~~~~-------~~D~Vih~A~~~~~----~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~r~ 126 (338)
T 2rh8_A 59 GDLKIFRADLTDELSFEAPIA-------GCDFVFHVATPVHF----ASEDPENDMIKPAIQGVVNVMKACTRAK-SVKRV 126 (338)
T ss_dssp SCEEEEECCTTTSSSSHHHHT-------TCSEEEEESSCCCC-------------CHHHHHHHHHHHHHHHHCT-TCCEE
T ss_pred CcEEEEecCCCChHHHHHHHc-------CCCEEEEeCCccCC----CCCCcHHHHHHHHHHHHHHHHHHHHHcC-CcCEE
Confidence 357788999999888776654 58999999986421 1112234577888888888888776642 12466
Q ss_pred EEEeccc
Q psy2266 89 VNVASKL 95 (313)
Q Consensus 89 V~isS~~ 95 (313)
|++||..
T Consensus 127 V~~SS~~ 133 (338)
T 2rh8_A 127 ILTSSAA 133 (338)
T ss_dssp EEECCHH
T ss_pred EEEecHH
Confidence 6666643
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.25 E-value=1.1e-06 Score=81.61 Aligned_cols=68 Identities=13% Similarity=0.055 Sum_probs=62.1
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
..+|..++++++++++.+.+++|++|+||||||....+++. ++|+.++++|+.|++.++++++|.|++
T Consensus 91 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 162 (322)
T 3qlj_A 91 DGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRG 162 (322)
T ss_dssp ECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 45688899999999999999999999999999998877763 689999999999999999999999864
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.25 E-value=1.1e-06 Score=79.66 Aligned_cols=64 Identities=11% Similarity=0.081 Sum_probs=58.5
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..++++++++++.+.+++|++|+||||||....+++ .++|+.++++|+.|++.++++++|
T Consensus 76 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 143 (281)
T 3s55_A 76 AKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAP 143 (281)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3568889999999999999999999999999999877765 378999999999999999999998
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=98.25 E-value=1.9e-06 Score=80.70 Aligned_cols=153 Identities=10% Similarity=0.044 Sum_probs=97.5
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCC-CHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESL-TEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+..|+.+++.............-....+|.. +.+.+.+.++ ++|+++++|+........++....+++|+.|
T Consensus 49 g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-------~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~ 121 (372)
T 3slg_A 49 DWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-------KCDVILPLVAIATPATYVKQPLRVFELDFEA 121 (372)
T ss_dssp SCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH-------HCSEEEECBCCCCHHHHHHCHHHHHHHHTTT
T ss_pred CCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc-------cCCEEEEcCccccHHHHhhCHHHHHHHHHHH
Confidence 5688888775543332211111122456777 7777776665 5899999999876555556677899999999
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhccccc----CCCCCCch
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKE----AGWPEFSY 239 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~Y 239 (313)
+..+++++... ++++|++||....-.. .... .++ .+... ...+...|
T Consensus 122 ~~~ll~a~~~~---~~~~v~~SS~~vyg~~-~~~~---------~~e----------------~~~~~~~~p~~~p~~~Y 172 (372)
T 3slg_A 122 NLPIVRSAVKY---GKHLVFPSTSEVYGMC-ADEQ---------FDP----------------DASALTYGPINKPRWIY 172 (372)
T ss_dssp THHHHHHHHHH---TCEEEEECCGGGGBSC-CCSS---------BCT----------------TTCCEEECCTTCTTHHH
T ss_pred HHHHHHHHHHh---CCcEEEeCcHHHhCCC-CCCC---------CCc----------------cccccccCCCCCCCCcH
Confidence 99988887653 2799999996543211 0000 000 00000 00223359
Q ss_pred hhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 240 SVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 240 ~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
+.||.+.+.+++. +..+ |++++.+.||.|-.|-.
T Consensus 173 ~~sK~~~E~~~~~----~~~~----g~~~~ilRp~~v~G~~~ 206 (372)
T 3slg_A 173 ACSKQLMDRVIWG----YGME----GLNFTLFRPFNWIGPGL 206 (372)
T ss_dssp HHHHHHHHHHHHH----HHTT----TCEEEEEEECSEECSSC
T ss_pred HHHHHHHHHHHHH----HHHC----CCCEEEEccccccCCCc
Confidence 9999999999944 4433 79999999999876653
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.24 E-value=2.8e-07 Score=79.49 Aligned_cols=91 Identities=11% Similarity=-0.019 Sum_probs=70.8
Q ss_pred ccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHH
Q psy2266 134 LDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQL 213 (313)
Q Consensus 134 lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (313)
+|+++||||.... ..++++..+++|+.++..+++++.+. ..+++|++||..+..
T Consensus 66 ~d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~---------------------- 119 (215)
T 2a35_A 66 IDTAFCCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEM--GARHYLVVSALGADA---------------------- 119 (215)
T ss_dssp CSEEEECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCT----------------------
T ss_pred hcEEEECeeeccc--cCCCHHHHHHhhHHHHHHHHHHHHHc--CCCEEEEECCcccCC----------------------
Confidence 8999999996432 23567889999999999999887652 236899999987642
Q ss_pred HHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeE-EEeecccccccccc
Q psy2266 214 LDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDII-VNPVHPGYVNTDLT 281 (313)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~-vn~v~PG~v~T~~~ 281 (313)
.+...|+.+|.+++.++ +. .|++ ++.+.||++.++..
T Consensus 120 --------------------~~~~~y~~sK~~~e~~~----~~-------~~~~~~~~vrp~~v~g~~~ 157 (215)
T 2a35_A 120 --------------------KSSIFYNRVKGELEQAL----QE-------QGWPQLTIARPSLLFGPRE 157 (215)
T ss_dssp --------------------TCSSHHHHHHHHHHHHH----TT-------SCCSEEEEEECCSEESTTS
T ss_pred --------------------CCccHHHHHHHHHHHHH----HH-------cCCCeEEEEeCceeeCCCC
Confidence 12346999999999887 33 2798 99999999988753
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.24 E-value=8.6e-07 Score=79.78 Aligned_cols=90 Identities=11% Similarity=0.115 Sum_probs=68.9
Q ss_pred cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcC-CCCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDT-APGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~-~~~~~----~~ 151 (313)
++|.+|+.+++........ ...+ + ....+|..++++++++++.+.+++|++|+||||||.. ..+++ .+
T Consensus 29 ~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~ 107 (262)
T 1zem_A 29 EEGTAIALLDMNREALEKA-EASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSD 107 (262)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHH
T ss_pred HCCCEEEEEeCCHHHHHHH-HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHH
Confidence 4577887776654332211 1111 1 1245688899999999999999999999999999987 55565 36
Q ss_pred hhhhhhhcccccHHHHHHHHhh
Q psy2266 152 RAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+|+.++++|+.|++.++++++|
T Consensus 108 ~~~~~~~~N~~g~~~~~~~~~~ 129 (262)
T 1zem_A 108 DFARVLTINVTGAFHVLKAVSR 129 (262)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHH
Confidence 8999999999999999999998
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=1.1e-06 Score=79.95 Aligned_cols=71 Identities=17% Similarity=0.096 Sum_probs=63.3
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC-c----chhhhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS-F----GQRAETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~-~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
..+|..++++++++++.+.+++|++|+||||||....++ + .++|+.++++|+.|++.++++++|.|+++++
T Consensus 81 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 156 (286)
T 3uve_A 81 AEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGR 156 (286)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred EEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC
Confidence 356888999999999999999999999999999876664 4 4789999999999999999999999987554
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=2e-06 Score=81.16 Aligned_cols=166 Identities=16% Similarity=0.045 Sum_probs=98.5
Q ss_pred HHHHHhcc-cCC-ceEEEEeccccccc-CCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcch
Q psy2266 75 CHILFPLL-RPH-ARVVNVASKLGMLY-NVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQ 151 (313)
Q Consensus 75 ~ra~~~~m-~~~-g~IV~isS~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~ 151 (313)
-++++..+ +++ ..|+.+++...... .......-....+|..+++++++++ .++|++|++|+........+
T Consensus 45 G~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~-------~~~d~Vih~A~~~~~~~~~~ 117 (377)
T 2q1s_A 45 GSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQ-------DEYDYVFHLATYHGNQSSIH 117 (377)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCC-------SCCSEEEECCCCSCHHHHHH
T ss_pred HHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHh-------hCCCEEEECCCccCchhhhh
Confidence 34444433 446 78887766433211 1110011122345667777655443 38999999999764433345
Q ss_pred hhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhccccc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKE 231 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (313)
+++..+++|+.|+..+++++... ..-+++|++||....-.. .... ....++.+
T Consensus 118 ~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~V~~SS~~vyg~~-~~~~-------------------------~~~~E~~~ 170 (377)
T 2q1s_A 118 DPLADHENNTLTTLKLYERLKHF-KRLKKVVYSAAGCSIAEK-TFDD-------------------------AKATEETD 170 (377)
T ss_dssp CHHHHHHHHTHHHHHHHHHHTTC-SSCCEEEEEEEC----------------------------------------CCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCCHHHcCCC-CCCC-------------------------cCcccccc
Confidence 67889999999999999888542 022689999997643210 0000 00000000
Q ss_pred --CC-CCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 232 --AG-WPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 232 --~~-~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
.. .+...|+.+|.+...+++.++.+. |++++.+.||.|.++..
T Consensus 171 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------gi~~~ilRp~~v~G~~~ 216 (377)
T 2q1s_A 171 IVSLHNNDSPYSMSKIFGEFYSVYYHKQH-------QLPTVRARFQNVYGPGE 216 (377)
T ss_dssp CCCSSCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECCEECTTC
T ss_pred cccccCCCCchHHHHHHHHHHHHHHHHHh-------CCCEEEEeeccEECCCC
Confidence 11 334569999999999997665542 79999999999988764
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.24 E-value=6.3e-06 Score=76.31 Aligned_cols=105 Identities=13% Similarity=0.015 Sum_probs=68.0
Q ss_pred HHHHhcc-cCCceEEEEeccccccc-CCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhh
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLY-NVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRA 153 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~ 153 (313)
++++..+ +++..|+.+++...... ............+|..+.++++++++. +++|++|||||..... ..+++
T Consensus 35 ~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~D~vih~A~~~~~~-~~~~~ 108 (333)
T 2q1w_A 35 SHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGD-----LQPDAVVHTAASYKDP-DDWYN 108 (333)
T ss_dssp HHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHH-----HCCSEEEECCCCCSCT-TCHHH
T ss_pred HHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhc-----cCCcEEEECceecCCC-ccCCh
Confidence 3444333 45678887766432211 111001112245677788887777654 4799999999986543 33444
Q ss_pred hhhhhcccccHHHHHHHHhhcccCCCceEEecCCccc
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM 190 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~ 190 (313)
+ +++|+.|+..+++++.+ ...++||++||....
T Consensus 109 ~--~~~N~~~~~~l~~a~~~--~~~~~iV~~SS~~~~ 141 (333)
T 2q1w_A 109 D--TLTNCVGGSNVVQAAKK--NNVGRFVYFQTALCY 141 (333)
T ss_dssp H--HHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGGG
T ss_pred H--HHHHHHHHHHHHHHHHH--hCCCEEEEECcHHHh
Confidence 4 99999999999999987 234799999997653
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.24 E-value=9.1e-07 Score=79.48 Aligned_cols=92 Identities=11% Similarity=0.001 Sum_probs=70.6
Q ss_pred cCCceEEEEecccccccCCCchhh--h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL--R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAET 155 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~--~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~ 155 (313)
++|.+|+.+++........ ...+ + ....+|..++++++++++.+.+++|++|+||||||....+++ .++|+.
T Consensus 34 ~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~ 112 (263)
T 3ak4_A 34 KAGATVAIADLDVMAAQAV-VAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDF 112 (263)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHH
T ss_pred HCCCEEEEEeCCHHHHHHH-HHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHH
Confidence 4577888776654322111 0011 1 224568889999999999999999999999999998876665 368999
Q ss_pred hhhcccccHHHHHHHHhhcc
Q psy2266 156 TLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p~l 175 (313)
++++|+.|++.++++++|.|
T Consensus 113 ~~~~n~~g~~~~~~~~~~~~ 132 (263)
T 3ak4_A 113 NFDVNARGVFLANQIACRHF 132 (263)
T ss_dssp HHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHH
Confidence 99999999999999999966
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.24 E-value=2.1e-07 Score=84.37 Aligned_cols=102 Identities=15% Similarity=0.034 Sum_probs=72.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+........ ...+.+. ....+|..|++++++++ .+|++|+||||||+...++
T Consensus 23 ~aiA~~la~~Ga~Vvi~~r~~~~---~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~-----~~g~iDiLVNNAGi~~~~~ 94 (247)
T 4hp8_A 23 QAIAVGLAAAGAEVVCAARRAPD---ETLDIIAKDGGNASALLIDFADPLAAKDSF-----TDAGFDILVNNAGIIRRAD 94 (247)
T ss_dssp HHHHHHHHHTTCEEEEEESSCCH---HHHHHHHHTTCCEEEEECCTTSTTTTTTSS-----TTTCCCEEEECCCCCCCCC
T ss_pred HHHHHHHHHcCCEEEEEeCCcHH---HHHHHHHHhCCcEEEEEccCCCHHHHHHHH-----HhCCCCEEEECCCCCCCCC
Confidence 3444433 567888877654321 1111111 12456777887776655 3699999999999998888
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhhcccCCCceEEec
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 185 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vs 185 (313)
+. ++|++++++|+.|+|+++|+++|.|+++++--.|-
T Consensus 95 ~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IV 135 (247)
T 4hp8_A 95 SVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVV 135 (247)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred cccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEE
Confidence 74 78999999999999999999999999877644333
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=98.24 E-value=1.4e-06 Score=77.99 Aligned_cols=66 Identities=12% Similarity=0.045 Sum_probs=59.7
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..++++++++++.+.+++|++|+||||||....+++ .++|+.++++|+.|++.+++.++|.|
T Consensus 56 ~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~ 125 (255)
T 2q2v_A 56 HPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGM 125 (255)
T ss_dssp ECCCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3568889999999999999999999999999998776665 37899999999999999999999977
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=4.1e-07 Score=81.52 Aligned_cols=90 Identities=16% Similarity=0.123 Sum_probs=68.5
Q ss_pred cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CCCc----chhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PGSF----GQRAE 154 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~~~----~~~~~ 154 (313)
++|.+|+.+++......+. ..++. ....+|..++++++++++.+.+++|++|+||||||... .+++ .++|+
T Consensus 22 ~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~ 100 (248)
T 3asu_A 22 QQGHKVIATGRRQERLQEL-KDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWE 100 (248)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHH
T ss_pred HCCCEEEEEeCCHHHHHHH-HHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHH
Confidence 4577888777654332221 11111 12456888999999999999999999999999999863 4454 37899
Q ss_pred hhhhcccccHHHHHHHHhh
Q psy2266 155 TTLATNFFALVTVCHILFP 173 (313)
Q Consensus 155 ~~~~~N~~g~~~~~~~~~p 173 (313)
.++++|+.|++.++++++|
T Consensus 101 ~~~~~N~~g~~~l~~~~~~ 119 (248)
T 3asu_A 101 TMIDTNNKGLVYMTRAVLP 119 (248)
T ss_dssp HHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHH
Confidence 9999999999999999998
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=9.9e-07 Score=80.19 Aligned_cols=91 Identities=18% Similarity=0.182 Sum_probs=70.1
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
++|.+|+.+++......+. ...+. ....+|..++++++++++.+.+++|++|+||||||....+++ .++
T Consensus 44 ~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~ 122 (277)
T 2rhc_B 44 KEGLRVFVCARGEEGLRTT-LKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL 122 (277)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHH
T ss_pred HCCCEEEEEeCCHHHHHHH-HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHH
Confidence 4577888777654332211 11111 124578889999999999999999999999999998776665 368
Q ss_pred hhhhhhcccccHHHHHHHHhhc
Q psy2266 153 AETTLATNFFALVTVCHILFPL 174 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~ 174 (313)
|+.++++|+.|++.++++++|.
T Consensus 123 ~~~~~~~N~~g~~~l~~~~~~~ 144 (277)
T 2rhc_B 123 WLDVVETNLTGVFRVTKQVLKA 144 (277)
T ss_dssp HHHHHHHHTHHHHHHHHHHHTT
T ss_pred HHHHHHHHhHHHHHHHHHHhCh
Confidence 9999999999999999999983
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.4e-06 Score=78.31 Aligned_cols=90 Identities=20% Similarity=0.173 Sum_probs=69.1
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCc-CCCCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMD-TAPGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~-~~~~~~----~~ 151 (313)
++|.+|+.+++......... ..+. ....+|..+.++++++++.+.+++|++|+||||||. ...+++ .+
T Consensus 51 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~ 129 (262)
T 3rkr_A 51 SLGARVVLTARDVEKLRAVE-REIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPA 129 (262)
T ss_dssp HTTCEEEEEESCHHHHHHHH-HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHH
T ss_pred HCCCEEEEEECCHHHHHHHH-HHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHH
Confidence 55778887776544332221 1111 124568889999999999999999999999999998 444554 37
Q ss_pred hhhhhhhcccccHHHHHHHHhh
Q psy2266 152 RAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+|+.++++|+.|++.++++++|
T Consensus 130 ~~~~~~~vN~~g~~~l~~~~~~ 151 (262)
T 3rkr_A 130 EWDALIAVNLKAPYLLLRAFAP 151 (262)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHH
Confidence 8999999999999999999998
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.3e-06 Score=78.21 Aligned_cols=64 Identities=19% Similarity=0.331 Sum_probs=57.4
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-CCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-GSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..++++++++++.+.+++|++|+||||||.... +++ .++|+.++++|+.|++.++++++|
T Consensus 55 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 123 (254)
T 3kzv_A 55 VVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALP 123 (254)
T ss_dssp EESCTTSHHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4568889999999999999999999999999998644 444 378999999999999999999998
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=1.2e-06 Score=78.74 Aligned_cols=92 Identities=13% Similarity=0.115 Sum_probs=71.2
Q ss_pred cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHc-CCccEEEeccCcCCCCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYN-GPLDKILDTAMDTAPGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~-G~lD~Linna~~~~~~~~----~~ 151 (313)
++|.+|+.+++......+. ...+ + ....+|..++++++++++.+.+++ |++|+||||||....+++ .+
T Consensus 31 ~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~ 109 (260)
T 2ae2_A 31 SLGASVYTCSRNQKELNDC-LTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVE 109 (260)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHH
T ss_pred HCCCEEEEEeCCHHHHHHH-HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHH
Confidence 4577888777654332221 1111 1 124568889999999999999999 999999999998876665 36
Q ss_pred hhhhhhhcccccHHHHHHHHhhcc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+|+.++++|+.|++.++++++|.|
T Consensus 110 ~~~~~~~~N~~g~~~~~~~~~~~~ 133 (260)
T 2ae2_A 110 DYSLIMSINFEAAYHLSVLAHPFL 133 (260)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHH
Confidence 899999999999999999999977
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.22 E-value=1.5e-06 Score=78.71 Aligned_cols=90 Identities=17% Similarity=0.148 Sum_probs=69.5
Q ss_pred cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHc-CCccEEEeccCcCCCCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYN-GPLDKILDTAMDTAPGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~-G~lD~Linna~~~~~~~~----~~ 151 (313)
++|.+|+.+++......+. ...+ + ....+|..++++++++++.+.+.+ |++|+||||||....+++ .+
T Consensus 43 ~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~ 121 (273)
T 1ae1_A 43 GLGARVYTCSRNEKELDEC-LEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEK 121 (273)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHH
T ss_pred HCCCEEEEEeCCHHHHHHH-HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHH
Confidence 4577888777654332211 1111 1 124568889999999999999999 999999999998776665 36
Q ss_pred hhhhhhhcccccHHHHHHHHhh
Q psy2266 152 RAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+|+.++++|+.|++.++++++|
T Consensus 122 ~~~~~~~~N~~g~~~~~~~~~~ 143 (273)
T 1ae1_A 122 DYNIIMGTNFEAAYHLSQIAYP 143 (273)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHH
Confidence 8999999999999999999998
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.4e-06 Score=79.35 Aligned_cols=96 Identities=19% Similarity=0.145 Sum_probs=71.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++......... ..+. ....+|..+.++++++++.+.+. |++|+||||||....++
T Consensus 47 ~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-g~iD~lvnnAg~~~~~~ 124 (275)
T 4imr_A 47 AAIAEGLAGAGAHVILHGVKPGSTAAVQ-QRIIASGGTAQELAGDLSEAGAGTDLIERAEAI-APVDILVINASAQINAT 124 (275)
T ss_dssp HHHHHHHHHTTCEEEEEESSTTTTHHHH-HHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-SCCCEEEECCCCCCCBC
T ss_pred HHHHHHHHHCCCEEEEEcCCHHHHHHHH-HHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-CCCCEEEECCCCCCCCC
Confidence 3444433 55778887776544332221 1111 12456778999999999999888 99999999999987777
Q ss_pred c----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 F----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 ~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+ .++|+.++++|+.|++.++++++|
T Consensus 125 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 153 (275)
T 4imr_A 125 LSALTPNDLAFQLAVNLGSTVDMLQSALP 153 (275)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 5 378999999999999999999999
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=7e-07 Score=81.88 Aligned_cols=67 Identities=12% Similarity=0.024 Sum_probs=46.8
Q ss_pred cCCceEEEEe-cccccccCCCchhhh-------hhhcccCCCHH-----------------HHHHHHHHHHHHcCCccEE
Q psy2266 83 RPHARVVNVA-SKLGMLYNVPSQELR-------QTLFNESLTED-----------------QLLDMMTDYVQYNGPLDKI 137 (313)
Q Consensus 83 ~~~g~IV~is-S~~~~~~~~~~~~~~-------~~~~~d~~~~~-----------------~~~~~~~~~~~~~G~lD~L 137 (313)
++|.+|+.++ +........ ...+. ....+|..+.+ +++++++.+.+++|++|+|
T Consensus 31 ~~G~~V~~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~l 109 (291)
T 1e7w_A 31 AEGYAVCLHYHRSAAEANAL-SATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVL 109 (291)
T ss_dssp HTTCEEEEEESSCHHHHHHH-HHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEE
T ss_pred HCCCeEEEEcCCCHHHHHHH-HHHHhhhcCCeeEEEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEE
Confidence 4577888777 544332211 11111 12456777888 9999999999999999999
Q ss_pred EeccCcCCCCCcc
Q psy2266 138 LDTAMDTAPGSFG 150 (313)
Q Consensus 138 inna~~~~~~~~~ 150 (313)
|||||....+++.
T Consensus 110 vnnAg~~~~~~~~ 122 (291)
T 1e7w_A 110 VNNASSFYPTPLL 122 (291)
T ss_dssp EECCCCCCCCCCC
T ss_pred EECCCCCCCCChh
Confidence 9999987766653
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.21 E-value=5.1e-07 Score=82.19 Aligned_cols=90 Identities=16% Similarity=0.117 Sum_probs=69.2
Q ss_pred cCCceEEEEecccccccCCCchhh----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-CCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-GSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~~~----~~~ 152 (313)
++|.+|+.+++......+. ...+ + ....+|..++++++++++.+.+.+|++|+||||||.... +++ .++
T Consensus 43 ~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~ 121 (272)
T 2nwq_A 43 EAGWSLVLTGRREERLQAL-AGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDD 121 (272)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHH
T ss_pred HCCCEEEEEECCHHHHHHH-HHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHH
Confidence 4577888777654332221 1111 1 124568889999999999999999999999999998753 555 378
Q ss_pred hhhhhhcccccHHHHHHHHhh
Q psy2266 153 AETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p 173 (313)
|+.++++|+.|++.+++.++|
T Consensus 122 ~~~~~~vN~~g~~~~~~~~~~ 142 (272)
T 2nwq_A 122 WDTMVDTNIKGLLYSTRLLLP 142 (272)
T ss_dssp HHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.21 E-value=1.4e-06 Score=80.92 Aligned_cols=71 Identities=14% Similarity=0.205 Sum_probs=64.0
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
..+|..++++++++++.+.+++|++|+||||||....+++ .++|+.++++|+.|++.++++++|.|++.+.
T Consensus 112 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 186 (317)
T 3oec_A 112 RQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQ 186 (317)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCS
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 3568889999999999999999999999999999877765 3789999999999999999999999987653
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=1.1e-05 Score=68.48 Aligned_cols=141 Identities=8% Similarity=-0.022 Sum_probs=86.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhh
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAE 154 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~ 154 (313)
+++++.+ +++..|+.+++......... ...-....+|..+++++.+.++ ++|++++|||.....
T Consensus 17 ~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~~~~~~------- 81 (206)
T 1hdo_A 17 LTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTVA-------GQDAVIVLLGTRNDL------- 81 (206)
T ss_dssp HHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHHT-------TCSEEEECCCCTTCC-------
T ss_pred HHHHHHHHHCCCeEEEEEeChhhccccc-CCceEEEEecCCCHHHHHHHHc-------CCCEEEECccCCCCC-------
Confidence 3344333 34678888877654433221 1111224567778777666553 579999999975431
Q ss_pred hhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCC
Q psy2266 155 TTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGW 234 (313)
Q Consensus 155 ~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (313)
...++|+.++..+++++... +.+++|++||....... +. ...
T Consensus 82 ~~~~~n~~~~~~~~~~~~~~--~~~~~v~~Ss~~~~~~~-~~-----------------------------------~~~ 123 (206)
T 1hdo_A 82 SPTTVMSEGARNIVAAMKAH--GVDKVVACTSAFLLWDP-TK-----------------------------------VPP 123 (206)
T ss_dssp SCCCHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCT-TC-----------------------------------SCG
T ss_pred CccchHHHHHHHHHHHHHHh--CCCeEEEEeeeeeccCc-cc-----------------------------------ccc
Confidence 12357877777777766542 23689999998654311 00 000
Q ss_pred CCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccc-cccc
Q psy2266 235 PEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYV-NTDL 280 (313)
Q Consensus 235 ~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v-~T~~ 280 (313)
+...|+.+|.++..++ +. .|++++.+.||++ .++.
T Consensus 124 ~~~~y~~~K~~~e~~~----~~-------~~i~~~~lrp~~~~~~~~ 159 (206)
T 1hdo_A 124 RLQAVTDDHIRMHKVL----RE-------SGLKYVAVMPPHIGDQPL 159 (206)
T ss_dssp GGHHHHHHHHHHHHHH----HH-------TCSEEEEECCSEEECCCC
T ss_pred cchhHHHHHHHHHHHH----Hh-------CCCCEEEEeCCcccCCCC
Confidence 2345999999999887 22 2899999999998 4443
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.20 E-value=1.4e-06 Score=79.05 Aligned_cols=90 Identities=21% Similarity=0.256 Sum_probs=68.3
Q ss_pred cCCceEEEEecccccccCCCchhh--hhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-CCc----chhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL--RQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-GSF----GQRAET 155 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~~~----~~~~~~ 155 (313)
++|.+|+.+++......... ..+ .....+|..++++++++++.+.+++|++|+||||||.... .++ .++|+.
T Consensus 31 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~ 109 (270)
T 1yde_A 31 NSGARVVICDKDESGGRALE-QELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQ 109 (270)
T ss_dssp HTTCEEEEEESCHHHHHHHH-HHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHH
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHH
Confidence 45778887766543322110 111 1234678889999999999999999999999999998653 444 367999
Q ss_pred hhhcccccHHHHHHHHhh
Q psy2266 156 TLATNFFALVTVCHILFP 173 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p 173 (313)
++++|+.|++.++++++|
T Consensus 110 ~~~~N~~g~~~l~~~~~~ 127 (270)
T 1yde_A 110 LLELNLLGTYTLTKLALP 127 (270)
T ss_dssp HHHHHTHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHH
Confidence 999999999999999998
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.20 E-value=1.1e-06 Score=78.37 Aligned_cols=90 Identities=11% Similarity=0.056 Sum_probs=68.2
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC---CCCc----
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA---PGSF---- 149 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~---~~~~---- 149 (313)
++|.+|+.+++.......... .+. ....+|..++++++++++.+.+.+|++|+||||||... ..++
T Consensus 31 ~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~ 109 (253)
T 3qiv_A 31 REGAAVVVADINAEAAEAVAK-QIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTID 109 (253)
T ss_dssp HTTCEEEEEESCHHHHHHHHH-HHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSC
T ss_pred HCCCEEEEEcCCHHHHHHHHH-HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCC
Confidence 457788877765443322211 111 12467888999999999999999999999999999842 2222
Q ss_pred chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 ~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.++|+.++++|+.|++.+++.++|
T Consensus 110 ~~~~~~~~~~N~~g~~~~~~~~~~ 133 (253)
T 3qiv_A 110 PEYYKKFMSVNLDGALWCTRAVYK 133 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHH
Confidence 478999999999999999999998
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=98.20 E-value=1.1e-06 Score=78.84 Aligned_cols=91 Identities=12% Similarity=0.102 Sum_probs=70.2
Q ss_pred cCCceEEEEecccccccCCCchhh-------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----c
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----G 150 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~ 150 (313)
++|.+|+.+++......+.. .++ + ....+|..++++++++++.+.+++| +|+||||||....+++ .
T Consensus 29 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-id~lv~~Ag~~~~~~~~~~~~ 106 (260)
T 2z1n_A 29 RNGARLLLFSRNREKLEAAA-SRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG-ADILVYSTGGPRPGRFMELGV 106 (260)
T ss_dssp HTTCEEEEEESCHHHHHHHH-HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC-CSEEEECCCCCCCBCGGGCCH
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC-CCEEEECCCCCCCCCcccCCH
Confidence 45778887776543322211 111 1 1245688899999999999999999 9999999998766665 3
Q ss_pred hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 151 QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
++|+.++++|+.|++.+++.++|.|
T Consensus 107 ~~~~~~~~~N~~g~~~~~~~~~~~~ 131 (260)
T 2z1n_A 107 EDWDESYRLLARSAVWVGRRAAEQM 131 (260)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6899999999999999999999976
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.20 E-value=1.7e-06 Score=78.75 Aligned_cols=89 Identities=13% Similarity=0.211 Sum_probs=67.5
Q ss_pred cCCceEEEEecccccccCCCchhh------hhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC----CCc---
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL------RQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP----GSF--- 149 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~----~~~--- 149 (313)
++|.+|+.+++... ..+ ....+ .....+|..++++++++++.+.+++|++|+||||||.... +++
T Consensus 45 ~~G~~V~~~~r~~~-~~~-~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~ 122 (285)
T 2p91_A 45 REGAQLAFTYATPK-LEK-RVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDT 122 (285)
T ss_dssp HTTCEEEEEESSGG-GHH-HHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGC
T ss_pred HcCCEEEEEeCCHH-HHH-HHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccC
Confidence 45778887766542 100 01111 1224568889999999999999999999999999998754 444
Q ss_pred -chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 -GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 -~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.++|+.++++|+.|++.++++++|
T Consensus 123 ~~~~~~~~~~~N~~g~~~l~~~~~~ 147 (285)
T 2p91_A 123 SREGFKIAMDISVYSLIALTRELLP 147 (285)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 378999999999999999999998
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.19 E-value=1.9e-06 Score=76.36 Aligned_cols=92 Identities=20% Similarity=0.191 Sum_probs=69.2
Q ss_pred cCCceEEEEecccccccCCCchhhh-------hhhcccC--CCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CCCc---
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR-------QTLFNES--LTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PGSF--- 149 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~-------~~~~~d~--~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~~~--- 149 (313)
++|.+|+.+++......+.. +.+. ....+|. .+.++++++++.+.+.+|++|+||||||... ..++
T Consensus 36 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~ 114 (247)
T 3i1j_A 36 AHGASVVLLGRTEASLAEVS-DQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQL 114 (247)
T ss_dssp HTTCEEEEEESCHHHHHHHH-HHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGS
T ss_pred HCCCEEEEEecCHHHHHHHH-HHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccC
Confidence 45778888776654432221 1111 1123344 7999999999999999999999999999863 4444
Q ss_pred -chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 150 -GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 150 -~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
.++|+.++++|+.|++.+++.++|.|
T Consensus 115 ~~~~~~~~~~~N~~g~~~l~~~~~~~~ 141 (247)
T 3i1j_A 115 PDEDFMQVMHVNVNATFMLTRALLPLL 141 (247)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 37899999999999999999999977
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.18 E-value=4.2e-06 Score=75.94 Aligned_cols=127 Identities=13% Similarity=0.006 Sum_probs=83.7
Q ss_pred ccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCcccc
Q psy2266 112 NESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGML 191 (313)
Q Consensus 112 ~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~ 191 (313)
+|..+.+.++++.+... ++++|+++|||+.... ..++++..+++|+.|+..+++++... .. ++|++||.....
T Consensus 49 ~d~~~~~~~~~~~~~~~--~~~~d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~v~~SS~~v~g 121 (310)
T 1eq2_A 49 DYMDKEDFLIQIMAGEE--FGDVEAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYG 121 (310)
T ss_dssp EEEEHHHHHHHHHTTCC--CSSCCEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHH--TC-CEEEEEEGGGGT
T ss_pred cccccHHHHHHHHhccc--cCCCcEEEECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEeeHHHhC
Confidence 44445555554433100 2479999999997654 34567889999999999999988763 23 999999986532
Q ss_pred ccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEee
Q psy2266 192 YNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPV 271 (313)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v 271 (313)
.. ... .++++ ....+...|+.+|.+...+++.++.+ +|++++.+
T Consensus 122 ~~-~~~---------~~~E~-------------------~~~~p~~~Y~~sK~~~e~~~~~~~~~-------~g~~~~~l 165 (310)
T 1eq2_A 122 GR-TSD---------FIESR-------------------EYEKPLNVYGYSKFLFDEYVRQILPE-------ANSQIVGF 165 (310)
T ss_dssp TC-CSC---------BCSSG-------------------GGCCCSSHHHHHHHHHHHHHHHHGGG-------CSSCEEEE
T ss_pred CC-CCC---------CCCCC-------------------CCCCCCChhHHHHHHHHHHHHHHHHH-------cCCCEEEE
Confidence 11 000 00000 01233456999999999999554432 38999999
Q ss_pred cccccccccc
Q psy2266 272 HPGYVNTDLT 281 (313)
Q Consensus 272 ~PG~v~T~~~ 281 (313)
.||.|-.+..
T Consensus 166 rp~~v~G~~~ 175 (310)
T 1eq2_A 166 RYFNVYGPRE 175 (310)
T ss_dssp EECEEESSSC
T ss_pred eCCcEECcCC
Confidence 9999987653
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.16 E-value=2e-06 Score=80.38 Aligned_cols=64 Identities=13% Similarity=0.148 Sum_probs=58.9
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..++++++++++.+.+++|++|+||||||....+++. ++|+.++++|+.|++.++++++|
T Consensus 64 ~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp 131 (324)
T 3u9l_A 64 LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALP 131 (324)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 45688899999999999999999999999999998777763 78999999999999999999999
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=98.16 E-value=9e-06 Score=83.17 Aligned_cols=77 Identities=16% Similarity=0.234 Sum_probs=52.8
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.++.++.+|++|.++++++++. + ++|+||||||..... ...+.....+++|+.++..+++++... ..+++
T Consensus 61 ~~v~~v~~Dl~d~~~l~~~~~~----~-~~D~Vih~A~~~~~~---~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~~i 130 (699)
T 1z45_A 61 HHIPFYEVDLCDRKGLEKVFKE----Y-KIDSVIHFAGLKAVG---ESTQIPLRYYHNNILGTVVLLELMQQY--NVSKF 130 (699)
T ss_dssp SCCCEEECCTTCHHHHHHHHHH----S-CCCEEEECCSCCCHH---HHHHSHHHHHHHHHHHHHHHHHHHHHH--TCCEE
T ss_pred CceEEEEcCCCCHHHHHHHHHh----C-CCCEEEECCcccCcC---ccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEE
Confidence 4577889999999988877764 2 799999999975421 111334567888888888887765432 23466
Q ss_pred EEEeccc
Q psy2266 89 VNVASKL 95 (313)
Q Consensus 89 V~isS~~ 95 (313)
|++||..
T Consensus 131 V~~SS~~ 137 (699)
T 1z45_A 131 VFSSSAT 137 (699)
T ss_dssp EEEEEGG
T ss_pred EEECcHH
Confidence 6666643
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.15 E-value=1.1e-06 Score=82.12 Aligned_cols=74 Identities=12% Similarity=0.015 Sum_probs=49.1
Q ss_pred HHHHhcc-cCCceEEEEe-cccccccCCCchhhh-------hhhcccCCCHH-----------------HHHHHHHHHHH
Q psy2266 76 HILFPLL-RPHARVVNVA-SKLGMLYNVPSQELR-------QTLFNESLTED-----------------QLLDMMTDYVQ 129 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~is-S~~~~~~~~~~~~~~-------~~~~~d~~~~~-----------------~~~~~~~~~~~ 129 (313)
++++..+ ++|.+|+.+. +......+. ...+. ....+|..+.+ +++++++.+.+
T Consensus 60 ~aia~~La~~G~~Vv~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 138 (328)
T 2qhx_A 60 RSIAEGLHAEGYAVCLHYHRSAAEANAL-SATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYT 138 (328)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHH-HHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHHHH-HHHHHhhcCCeEEEEEeeCCCchhccccccccccccccHHHHHHHHHHHHH
Confidence 3444333 4577888777 543322211 11111 12456777888 99999999999
Q ss_pred HcCCccEEEeccCcCCCCCcc
Q psy2266 130 YNGPLDKILDTAMDTAPGSFG 150 (313)
Q Consensus 130 ~~G~lD~Linna~~~~~~~~~ 150 (313)
++|++|+||||||.....++.
T Consensus 139 ~~g~iD~lVnnAG~~~~~~~~ 159 (328)
T 2qhx_A 139 HWGRCDVLVNNASSFYPTPLL 159 (328)
T ss_dssp HHSCCCEEEECCCCCCCCCSC
T ss_pred hcCCCCEEEECCCCCCCCChh
Confidence 999999999999987766653
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.12 E-value=4.4e-06 Score=73.88 Aligned_cols=98 Identities=12% Similarity=0.155 Sum_probs=71.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCc-----hhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPS-----QELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~-----~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ +++.+|+.+++......+... .+.+ ....+|..++++++++++.+.+++|++|+||||||.....+
T Consensus 16 ~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~ 95 (250)
T 2cfc_A 16 LAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSE 95 (250)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCTT
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 3344333 456788877765433221100 0111 22456888999999999999999999999999999876655
Q ss_pred ---c----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 ---F----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 ---~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+ .++|+.++++|+.|++.+++.++|
T Consensus 96 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 127 (250)
T 2cfc_A 96 AGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLP 127 (250)
T ss_dssp CCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cchhhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3 368999999999999999999998
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=98.12 E-value=2.2e-06 Score=78.10 Aligned_cols=96 Identities=13% Similarity=0.086 Sum_probs=70.1
Q ss_pred cCCceEEEEeccc-ccccCCCchhhh-------hhhcccCCC----HHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc-
Q psy2266 83 RPHARVVNVASKL-GMLYNVPSQELR-------QTLFNESLT----EDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF- 149 (313)
Q Consensus 83 ~~~g~IV~isS~~-~~~~~~~~~~~~-------~~~~~d~~~----~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~- 149 (313)
++|.+|+.+++.. ....+. ...+. ....+|..+ +++++++++.+.+++|++|+||||||....+++
T Consensus 45 ~~G~~V~~~~r~~~~~~~~~-~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~ 123 (288)
T 2x9g_A 45 QTGYRVVIHYHNSAEAAVSL-ADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLV 123 (288)
T ss_dssp HHTCEEEEEESSCHHHHHHH-HHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSC
T ss_pred HCCCeEEEEeCCchHHHHHH-HHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccc
Confidence 4577888777654 222111 11111 124567788 999999999999999999999999998765554
Q ss_pred -------------chhhhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 150 -------------GQRAETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 150 -------------~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
.++|+.++++|+.|++.+++.++|.|++.+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 166 (288)
T 2x9g_A 124 QGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTN 166 (288)
T ss_dssp CC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC----
T ss_pred cccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC
Confidence 257889999999999999999999997643
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=3.2e-06 Score=75.72 Aligned_cols=92 Identities=16% Similarity=0.138 Sum_probs=69.6
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~~~----~~ 151 (313)
++|.+|+.+++......+. ...+. ....+|..+.++++++++.+.+++|++|+||||||... .+++ .+
T Consensus 36 ~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~ 114 (260)
T 2zat_A 36 QDGAHVVVSSRKQENVDRT-VATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEE 114 (260)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHH
T ss_pred HCCCEEEEEeCCHHHHHHH-HHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHH
Confidence 4577888777654332211 11111 12356888999999999999999999999999999864 3443 36
Q ss_pred hhhhhhhcccccHHHHHHHHhhcc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+|+.++++|+.|++.++++++|.|
T Consensus 115 ~~~~~~~~N~~~~~~~~~~~~~~~ 138 (260)
T 2zat_A 115 VWDKILHVNVKATVLMTKAVVPEM 138 (260)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHH
Confidence 899999999999999999999977
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=1.5e-05 Score=72.15 Aligned_cols=145 Identities=14% Similarity=0.057 Sum_probs=94.3
Q ss_pred HHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhh
Q psy2266 76 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAET 155 (313)
Q Consensus 76 ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~ 155 (313)
++++..+.++..|+.+++... ...+|..+.+++.+.++.. ++|+++|+|+........++++.
T Consensus 14 ~~l~~~L~~g~~V~~~~r~~~------------~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~~~~~~~~~~~ 76 (299)
T 1n2s_A 14 WELQRSLAPVGNLIALDVHSK------------EFCGDFSNPKGVAETVRKL-----RPDVIVNAAAHTAVDKAESEPEL 76 (299)
T ss_dssp HHHHHHTTTTSEEEEECTTCS------------SSCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHHHHTTCHHH
T ss_pred HHHHHHhhcCCeEEEeccccc------------cccccCCCHHHHHHHHHhc-----CCCEEEECcccCCHhhhhcCHHH
Confidence 444444445677777765431 2345677887777766543 69999999996543333467788
Q ss_pred hhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCC
Q psy2266 156 TLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWP 235 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (313)
.+++|+.|+..+++++... +.++|++||........ .. ..++ .....+
T Consensus 77 ~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~vy~~~~-~~---------~~~E-------------------~~~~~p 124 (299)
T 1n2s_A 77 AQLLNATSVEAIAKAANET---GAWVVHYSTDYVFPGTG-DI---------PWQE-------------------TDATSP 124 (299)
T ss_dssp HHHHHTHHHHHHHHHHTTT---TCEEEEEEEGGGSCCCT-TC---------CBCT-------------------TSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHc---CCcEEEEecccEEeCCC-CC---------CCCC-------------------CCCCCC
Confidence 9999999999999988642 34899999986543110 00 0000 001223
Q ss_pred CCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 236 EFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 236 ~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
...|+.+|.+.+.+++ .+.. +++.+.||.+..+.
T Consensus 125 ~~~Y~~sK~~~E~~~~----~~~~-------~~~ilRp~~v~G~~ 158 (299)
T 1n2s_A 125 LNVYGKTKLAGEKALQ----DNCP-------KHLIFRTSWVYAGK 158 (299)
T ss_dssp SSHHHHHHHHHHHHHH----HHCS-------SEEEEEECSEECSS
T ss_pred ccHHHHHHHHHHHHHH----HhCC-------CeEEEeeeeecCCC
Confidence 4569999999999984 3331 57888999887764
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=2.6e-06 Score=77.48 Aligned_cols=91 Identities=10% Similarity=0.092 Sum_probs=67.4
Q ss_pred cCCceEEEEeccc--ccccCCCchhh-hhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC----CCc-----c
Q psy2266 83 RPHARVVNVASKL--GMLYNVPSQEL-RQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP----GSF-----G 150 (313)
Q Consensus 83 ~~~g~IV~isS~~--~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~----~~~-----~ 150 (313)
+++.+|+.+++.. ..+.+...... .....+|..+.++++++++.+.+.+|++|+||||||.... +++ .
T Consensus 50 ~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~ 129 (280)
T 3nrc_A 50 REGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTR 129 (280)
T ss_dssp HTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCH
T ss_pred HcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCH
Confidence 4577877776654 11111100000 1224578889999999999999999999999999998764 332 3
Q ss_pred hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++|+.++++|+.|++.++++++|
T Consensus 130 ~~~~~~~~~N~~~~~~l~~~~~~ 152 (280)
T 3nrc_A 130 EGFSIAHDISAYSFAALAKEGRS 152 (280)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999999999999999998
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=98.10 E-value=2.8e-06 Score=75.16 Aligned_cols=92 Identities=14% Similarity=0.117 Sum_probs=70.3
Q ss_pred cCCceEEEEecccccccCCCchhh----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRA 153 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~ 153 (313)
+++.+|+.+++........ ...+ + ....+|..++++++++++.+.+.+|++|+||||||....+++ .++|
T Consensus 28 ~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~ 106 (251)
T 1zk4_A 28 EEGAKVMITGRHSDVGEKA-AKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEW 106 (251)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHH
T ss_pred HCCCEEEEEeCCHHHHHHH-HHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHH
Confidence 4577888777654322111 0111 1 224568889999999999999999999999999998766654 3689
Q ss_pred hhhhhcccccHHHHHHHHhhcc
Q psy2266 154 ETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+.++++|+.|++.+++.++|.|
T Consensus 107 ~~~~~~N~~~~~~~~~~~~~~~ 128 (251)
T 1zk4_A 107 RKLLAVNLDGVFFGTRLGIQRM 128 (251)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999976
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.10 E-value=3.1e-06 Score=76.91 Aligned_cols=63 Identities=11% Similarity=0.027 Sum_probs=55.7
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..+.++++++ ....+++|++|+||||||....+++ .++|+.++++|+.|++.++++++|
T Consensus 84 ~~~Dv~d~~~v~~~-~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 150 (273)
T 3uf0_A 84 VVADLADLEGAANV-AEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGT 150 (273)
T ss_dssp EECCTTCHHHHHHH-HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEecCCCHHHHHHH-HHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 45788899999999 5566778999999999999888776 378999999999999999999998
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.10 E-value=1.8e-05 Score=71.26 Aligned_cols=142 Identities=13% Similarity=0.065 Sum_probs=94.1
Q ss_pred HHHHHhccc-CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhh
Q psy2266 75 CHILFPLLR-PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRA 153 (313)
Q Consensus 75 ~ra~~~~m~-~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~ 153 (313)
-++++..+. ++..|+.+++. .+|..+.+++.++++.. ++|+++|+|+........+++
T Consensus 18 G~~l~~~L~~~g~~V~~~~r~----------------~~D~~d~~~~~~~~~~~-----~~d~vi~~a~~~~~~~~~~~~ 76 (287)
T 3sc6_A 18 GKQLQEELNPEEYDIYPFDKK----------------LLDITNISQVQQVVQEI-----RPHIIIHCAAYTKVDQAEKER 76 (287)
T ss_dssp HHHHHHHSCTTTEEEEEECTT----------------TSCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHHHHTTCH
T ss_pred HHHHHHHHHhCCCEEEEeccc----------------ccCCCCHHHHHHHHHhc-----CCCEEEECCcccChHHHhcCH
Confidence 345555554 46677766652 24667788777777655 799999999987654445678
Q ss_pred hhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCC
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAG 233 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (313)
+..+++|+.|+..+++++... +.++|++||.......... ..+++ ...
T Consensus 77 ~~~~~~n~~~~~~l~~~~~~~---~~~~v~~SS~~vy~~~~~~----------~~~E~-------------------~~~ 124 (287)
T 3sc6_A 77 DLAYVINAIGARNVAVASQLV---GAKLVYISTDYVFQGDRPE----------GYDEF-------------------HNP 124 (287)
T ss_dssp HHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGSCCCCSS----------CBCTT-------------------SCC
T ss_pred HHHHHHHHHHHHHHHHHHHHc---CCeEEEEchhhhcCCCCCC----------CCCCC-------------------CCC
Confidence 899999999999999988652 4589999998654211000 00000 012
Q ss_pred CCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 234 WPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 234 ~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
.+...|+.+|.+...+++ .+.. ....+.||.|-.|.
T Consensus 125 ~p~~~Y~~sK~~~E~~~~----~~~~-------~~~ilR~~~v~G~~ 160 (287)
T 3sc6_A 125 APINIYGASKYAGEQFVK----ELHN-------KYFIVRTSWLYGKY 160 (287)
T ss_dssp CCCSHHHHHHHHHHHHHH----HHCS-------SEEEEEECSEECSS
T ss_pred CCCCHHHHHHHHHHHHHH----HhCC-------CcEEEeeeeecCCC
Confidence 334569999999999994 4432 23667788776553
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.09 E-value=1.5e-06 Score=79.02 Aligned_cols=64 Identities=11% Similarity=-0.040 Sum_probs=45.7
Q ss_pred cCCceEEEEecccccccCCCchhh------h-hhhcccCCCH-HHHHHHHHHHHHHcCCccEEEeccCcCCCC
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL------R-QTLFNESLTE-DQLLDMMTDYVQYNGPLDKILDTAMDTAPG 147 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~------~-~~~~~d~~~~-~~~~~~~~~~~~~~G~lD~Linna~~~~~~ 147 (313)
++|.+|+.+++......+.. ..+ + ....+|..+. ++++++++.+.+.+|++|+||||||....+
T Consensus 34 ~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~ 105 (311)
T 3o26_A 34 SNGIMVVLTCRDVTKGHEAV-EKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFS 105 (311)
T ss_dssp HTTCEEEEEESCHHHHHHHH-HHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECCCCCSCE
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECCcccccc
Confidence 45778888876654432211 111 1 1245677887 999999999999999999999999987654
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.09 E-value=3.1e-06 Score=74.28 Aligned_cols=92 Identities=17% Similarity=0.062 Sum_probs=70.3
Q ss_pred cCCceEEEEecccccccCCCchhh-h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETT 156 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~ 156 (313)
++|..|+.+++......+.. ..+ + ....+|..+.++++++++.+.+.+|++|++|||||....+++ .++|+.+
T Consensus 27 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~ 105 (234)
T 2ehd_A 27 AKGYRVGLMARDEKRLQALA-AELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLV 105 (234)
T ss_dssp HTTCEEEEEESCHHHHHHHH-HHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHH
T ss_pred HCCCEEEEEECCHHHHHHHH-HHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHH
Confidence 45677777766443222110 011 1 224568889999999999999999999999999998776664 3689999
Q ss_pred hhcccccHHHHHHHHhhcc
Q psy2266 157 LATNFFALVTVCHILFPLL 175 (313)
Q Consensus 157 ~~~N~~g~~~~~~~~~p~l 175 (313)
+++|+.|++.+++.++|.|
T Consensus 106 ~~~N~~~~~~~~~~~~~~~ 124 (234)
T 2ehd_A 106 LDTNLTGAFLGIRHAVPAL 124 (234)
T ss_dssp HHHHTHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHH
Confidence 9999999999999999976
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=3.1e-06 Score=97.85 Aligned_cols=118 Identities=10% Similarity=0.045 Sum_probs=87.6
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCCceEEec
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 185 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vs 185 (313)
..+|..+.++++++++.+. ++|++|+||||||....+++ .++|+.++++|+.|++++.+++.|.|++.|+||++|
T Consensus 1942 ~~~Dvsd~~~v~~~~~~~~-~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iS 2020 (2512)
T 2vz8_A 1942 STSNASSLDGARSLITEAT-QLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFS 2020 (2512)
T ss_dssp ECCCSSSHHHHHHHHHHHH-HHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEEC
T ss_pred EecCCCCHHHHHHHHHHHH-hcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEec
Confidence 4568889999999999986 58999999999999877776 378999999999999999999999988779999999
Q ss_pred CCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCC
Q psy2266 186 SKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPD 265 (313)
Q Consensus 186 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~g 265 (313)
|.++.. +..+..+|+++|+++..|+++.+. + |
T Consensus 2021 S~ag~~----------------------------------------g~~g~~~Y~aaKaal~~l~~~rr~----~----G 2052 (2512)
T 2vz8_A 2021 SVSCGR----------------------------------------GNAGQANYGFANSAMERICEKRRH----D----G 2052 (2512)
T ss_dssp CHHHHT----------------------------------------TCTTCHHHHHHHHHHHHHHHHHHH----T----T
T ss_pred chhhcC----------------------------------------CCCCcHHHHHHHHHHHHHHHHHHH----C----C
Confidence 999876 233445699999999999975433 2 5
Q ss_pred eEEEeeccccc
Q psy2266 266 IIVNPVHPGYV 276 (313)
Q Consensus 266 I~vn~v~PG~v 276 (313)
+...++..|.+
T Consensus 2053 l~~~a~~~g~~ 2063 (2512)
T 2vz8_A 2053 LPGLAVQWGAI 2063 (2512)
T ss_dssp SCCCEEEECCB
T ss_pred CcEEEEEccCc
Confidence 55555555543
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=2.4e-06 Score=77.98 Aligned_cols=97 Identities=10% Similarity=0.097 Sum_probs=74.3
Q ss_pred cCCceEEEEecccccccCCCchhh------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~ 151 (313)
++|.+|+.+++......+.. ..+ + ....+|..+.++++++++.+.+.+|++|+||||||....+++ .+
T Consensus 48 ~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~ 126 (302)
T 1w6u_A 48 SLGAQCVIASRKMDVLKATA-EQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPN 126 (302)
T ss_dssp HTTCEEEEEESCHHHHHHHH-HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHH
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHH
Confidence 45778887776543322111 111 1 124568889999999999999999999999999998766664 36
Q ss_pred hhhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
+|+.++++|+.|++.+++.++|.|++...
T Consensus 127 ~~~~~~~~N~~~~~~l~~~~~~~~~~~~~ 155 (302)
T 1w6u_A 127 AWKTITDIVLNGTAFVTLEIGKQLIKAQK 155 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Confidence 89999999999999999999999976553
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.07 E-value=3e-06 Score=76.74 Aligned_cols=96 Identities=15% Similarity=0.214 Sum_probs=73.8
Q ss_pred cCCceEEEEecccccccCCCchhhh--------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----c
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR--------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----G 150 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~--------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~ 150 (313)
++|.+|+.+++......+.. ..+. ....+|..++++++++++.+.+.+|++|+||||||.....++ .
T Consensus 54 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~ 132 (279)
T 1xg5_A 54 QQGLKVVGCARTVGNIEELA-AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGST 132 (279)
T ss_dssp HTTCEEEEEESCHHHHHHHH-HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCH
T ss_pred HCCCEEEEEECChHHHHHHH-HHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCH
Confidence 45778887776543322211 1111 123568889999999999999999999999999998776664 3
Q ss_pred hhhhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 151 QRAETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
++|+.++++|+.|++.+++.++|.|++.+
T Consensus 133 ~~~~~~~~~N~~~~~~~~~~~l~~~~~~~ 161 (279)
T 1xg5_A 133 SGWKDMFNVNVLALSICTREAYQSMKERN 161 (279)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 78999999999999999999999998644
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=4.5e-06 Score=74.46 Aligned_cols=95 Identities=11% Similarity=-0.015 Sum_probs=72.4
Q ss_pred cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----------
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF---------- 149 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~---------- 149 (313)
+++.+|+.+++......+.. .+++ ....+|..++++++++++.+.+++|++|+||||||.....++
T Consensus 34 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~ 112 (265)
T 2o23_A 34 GQGASAVLLDLPNSGGEAQA-KKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHT 112 (265)
T ss_dssp HTTCEEEEEECTTSSHHHHH-HHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECC
T ss_pred HCCCEEEEEeCCcHhHHHHH-HHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCC
Confidence 45778888776543322111 1111 224568889999999999999999999999999998765532
Q ss_pred chhhhhhhhcccccHHHHHHHHhhcccCC
Q psy2266 150 GQRAETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 150 ~~~~~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
.++|+.++++|+.|++.+++.++|.|++.
T Consensus 113 ~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 141 (265)
T 2o23_A 113 LEDFQRVLDVNLMGTFNVIRLVAGEMGQN 141 (265)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 36799999999999999999999999764
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.07 E-value=8.5e-06 Score=70.19 Aligned_cols=145 Identities=10% Similarity=0.050 Sum_probs=80.4
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhh
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAE 154 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~ 154 (313)
++++..+ +++..|+.+++......... ..-....+|..+.++ +.++++|++++|||....
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~---------~~~~~~d~vi~~ag~~~~-------- 74 (221)
T 3ew7_A 14 SRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTL---------SDLSDQNVVVDAYGISPD-------- 74 (221)
T ss_dssp HHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCH---------HHHTTCSEEEECCCSSTT--------
T ss_pred HHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhh---------hhhcCCCEEEECCcCCcc--------
Confidence 3444433 45678888877654332211 011123445555554 456789999999997431
Q ss_pred hhhhcccccHHHHHHHHhhcccCC--CceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccC
Q psy2266 155 TTLATNFFALVTVCHILFPLLRPH--ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEA 232 (313)
Q Consensus 155 ~~~~~N~~g~~~~~~~~~p~l~~~--g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (313)
+....+..++.+++.+++. +++|++||..+....+... ... + ...
T Consensus 75 -----~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~-----~~~----~-------------------~~~ 121 (221)
T 3ew7_A 75 -----EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGN-----TLL----E-------------------SKG 121 (221)
T ss_dssp -----TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC--------------------------------------------
T ss_pred -----ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCc-----ccc----c-------------------cCC
Confidence 2333455566777777654 7999999987754211000 000 0 001
Q ss_pred CCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccc
Q psy2266 233 GWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD 279 (313)
Q Consensus 233 ~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~ 279 (313)
..+...|+.+|.+...+. .+.. ...|++++.|.||++.++
T Consensus 122 ~~~~~~y~~~k~~~e~~~-~~~~------~~~gi~~~ivrp~~v~g~ 161 (221)
T 3ew7_A 122 LREAPYYPTARAQAKQLE-HLKS------HQAEFSWTYISPSAMFEP 161 (221)
T ss_dssp ---CCCSCCHHHHHHHHH-HHHT------TTTTSCEEEEECSSCCCC
T ss_pred CCCHHHHHHHHHHHHHHH-HHHh------hccCccEEEEeCcceecC
Confidence 223345999999888763 2111 124899999999999887
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=98.06 E-value=3.5e-06 Score=74.60 Aligned_cols=95 Identities=13% Similarity=0.050 Sum_probs=71.3
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhh-hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQ-TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF---- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~---- 149 (313)
++++..+ ++|.+|+.+++..... ...++. ...+|..+ ++++++++.+.+++|++|+|+||||....+++
T Consensus 16 ~~~a~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~ 90 (239)
T 2ekp_A 16 RAIAEALVARGYRVAIASRNPEEA----AQSLGAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELS 90 (239)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHH----HHHHTCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCC
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHH----HHhhCcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCC
Confidence 3344333 4577888777654321 112222 23557777 88999999999999999999999998766664
Q ss_pred chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 150 GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 150 ~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
.++|+.++++|+.|++.+++.++|.|
T Consensus 91 ~~~~~~~~~~N~~~~~~~~~~~~~~~ 116 (239)
T 2ekp_A 91 YEEWRRVLYLHLDVAFLLAQAAAPHM 116 (239)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 37899999999999999999999977
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=98.05 E-value=1.9e-05 Score=69.60 Aligned_cols=92 Identities=12% Similarity=0.070 Sum_probs=58.7
Q ss_pred HHHHHHhccc-CC-ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcch
Q psy2266 74 VCHILFPLLR-PH-ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQ 151 (313)
Q Consensus 74 l~ra~~~~m~-~~-g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~ 151 (313)
+-++++..+. ++ ..|+.+++........... .-....+|..++++++++++ ++|++|+|||..
T Consensus 35 iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~-------~~D~vv~~a~~~------- 99 (236)
T 3qvo_A 35 IARHVINQLADKQTIKQTLFARQPAKIHKPYPT-NSQIIMGDVLNHAALKQAMQ-------GQDIVYANLTGE------- 99 (236)
T ss_dssp HHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCT-TEEEEECCTTCHHHHHHHHT-------TCSEEEEECCST-------
T ss_pred HHHHHHHHHHhCCCceEEEEEcChhhhcccccC-CcEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC-------
Confidence 3455555554 45 5788777766554443221 11234567778888777654 679999999852
Q ss_pred hhhhhhhcccccHHHHHHHHhhcccCC--CceEEecCCcccc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLLRPH--ARVVNVASKLGML 191 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l~~~--g~iv~vss~~~~~ 191 (313)
.....++.+++.|++. ++||++||..+..
T Consensus 100 -----------~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~ 130 (236)
T 3qvo_A 100 -----------DLDIQANSVIAAMKACDVKRLIFVLSLGIYD 130 (236)
T ss_dssp -----------THHHHHHHHHHHHHHTTCCEEEEECCCCC--
T ss_pred -----------chhHHHHHHHHHHHHcCCCEEEEEecceecC
Confidence 1224567888888663 6899999987653
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=98.05 E-value=1.2e-05 Score=81.81 Aligned_cols=169 Identities=11% Similarity=0.040 Sum_probs=98.1
Q ss_pred HHHHHHhcc-cC-CceEEEEecccccccCCCchhhhhhhcccCCCHHH-HHHHHHHHHHHcCCccEEEeccCcCCCCCcc
Q psy2266 74 VCHILFPLL-RP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQ-LLDMMTDYVQYNGPLDKILDTAMDTAPGSFG 150 (313)
Q Consensus 74 l~ra~~~~m-~~-~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~G~lD~Linna~~~~~~~~~ 150 (313)
+-++++..+ +. +..|+.+++.............-....+|..+.++ +++.++ ++|+++||||........
T Consensus 327 IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-------~~D~Vih~Aa~~~~~~~~ 399 (660)
T 1z7e_A 327 IGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-------KCDVVLPLVAIATPIEYT 399 (660)
T ss_dssp HHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHH-------HCSEEEECCCCCCTHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhc-------CCCEEEECceecCccccc
Confidence 344444444 33 45777666543322111000001123445555443 333332 589999999976544445
Q ss_pred hhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccc
Q psy2266 151 QRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDK 230 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (313)
++++..+++|+.|+..+++++... ++++|++||....... ... .++++... ....
T Consensus 400 ~~~~~~~~~Nv~gt~~ll~aa~~~---~~r~V~~SS~~vyg~~-~~~---------~~~E~~~~------------~~~~ 454 (660)
T 1z7e_A 400 RNPLRVFELDFEENLRIIRYCVKY---RKRIIFPSTSEVYGMC-SDK---------YFDEDHSN------------LIVG 454 (660)
T ss_dssp HSHHHHHHHHTHHHHHHHHHHHHT---TCEEEEECCGGGGBTC-CSS---------SBCTTTCC------------EEEC
T ss_pred cCHHHHHHhhhHHHHHHHHHHHHh---CCEEEEEecHHHcCCC-CCc---------ccCCCccc------------cccC
Confidence 677889999999999998888763 3799999997654211 000 00000000 0000
Q ss_pred cCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 231 EAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 231 ~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
....+...|+.||.+.+.+++.++++. |++++.+.||.|.++..
T Consensus 455 p~~~p~~~Y~~sK~~~E~~~~~~~~~~-------gi~~~ilRpg~v~Gp~~ 498 (660)
T 1z7e_A 455 PVNKPRWIYSVSKQLLDRVIWAYGEKE-------GLQFTLFRPFNWMGPRL 498 (660)
T ss_dssp CTTCTTHHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECSEESTTS
T ss_pred cccCCCCCcHHHHHHHHHHHHHHHHHc-------CCCEEEECCCcccCCCc
Confidence 000122359999999999997665542 79999999999987753
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.05 E-value=4.8e-06 Score=76.04 Aligned_cols=126 Identities=13% Similarity=0.169 Sum_probs=108.3
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhc-ccC-CCceEE
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPL-LRP-HARVVN 183 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~-l~~-~g~iv~ 183 (313)
..+|..+.++++++++.+.+.+|++|+||||||....+++ .++|+.++++|+.|++.++++++|. +++ +|+||+
T Consensus 77 ~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~ 156 (303)
T 1yxm_A 77 IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVN 156 (303)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEE
T ss_pred EecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 4568889999999999999999999999999998766655 3688999999999999999999994 444 589999
Q ss_pred ecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCC
Q psy2266 184 VASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRR 263 (313)
Q Consensus 184 vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~ 263 (313)
+||.. .. +..+...|+++|+++..+++.++.++.+.
T Consensus 157 isS~~-~~----------------------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~--- 192 (303)
T 1yxm_A 157 IIVPT-KA----------------------------------------GFPLAVHSGAARAGVYNLTKSLALEWACS--- 192 (303)
T ss_dssp ECCCC-TT----------------------------------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGG---
T ss_pred EEeec-cc----------------------------------------CCCcchhhHHHHHHHHHHHHHHHHHhccc---
Confidence 99987 32 12233469999999999999999998766
Q ss_pred CCeEEEeeccccccccc
Q psy2266 264 PDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 264 ~gI~vn~v~PG~v~T~~ 280 (313)
||+||+|+||+|.|++
T Consensus 193 -gi~v~~v~Pg~v~t~~ 208 (303)
T 1yxm_A 193 -GIRINCVAPGVIYSQT 208 (303)
T ss_dssp -TEEEEEEEECSBCCTG
T ss_pred -CeEEEEEecCCcccch
Confidence 9999999999999995
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=5.4e-06 Score=73.42 Aligned_cols=94 Identities=14% Similarity=0.191 Sum_probs=71.0
Q ss_pred cCCceEEEEecc-cccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCc-CCCCCc----c
Q psy2266 83 RPHARVVNVASK-LGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMD-TAPGSF----G 150 (313)
Q Consensus 83 ~~~g~IV~isS~-~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~-~~~~~~----~ 150 (313)
+++.+|+.+++. ....... ...+ + ....+|..++++++++++.+.+++|++|+||||||. ...+++ .
T Consensus 29 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~ 107 (258)
T 3afn_B 29 RAGAKVGLHGRKAPANIDET-IASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDD 107 (258)
T ss_dssp HTTCEEEEEESSCCTTHHHH-HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCH
T ss_pred HCCCEEEEECCCchhhHHHH-HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCH
Confidence 457788877765 3222111 0111 1 124568889999999999999999999999999997 555554 3
Q ss_pred hhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 151 QRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
+.|+.++++|+.|++.+++.++|.|++
T Consensus 108 ~~~~~~~~~n~~~~~~~~~~~~~~~~~ 134 (258)
T 3afn_B 108 TFYDAVMDANIRSVVMTTKFALPHLAA 134 (258)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 679999999999999999999999865
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.04 E-value=5.7e-06 Score=73.55 Aligned_cols=86 Identities=15% Similarity=0.164 Sum_probs=63.9
Q ss_pred cCCceEEEEecccccccCCCchhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTL 157 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~ 157 (313)
++|.+|+.+++......+.. ...+ ....+|..++++++ .+.+++|++|+||||||....+++ .++|+.++
T Consensus 28 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~----~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~ 102 (246)
T 2ag5_A 28 REGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQID----QFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSM 102 (246)
T ss_dssp HTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHH----HHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHH
T ss_pred HCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHH----HHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHH
Confidence 45778888876554433322 1001 22456778888877 566778999999999998877665 36899999
Q ss_pred hcccccHHHHHHHHhh
Q psy2266 158 ATNFFALVTVCHILFP 173 (313)
Q Consensus 158 ~~N~~g~~~~~~~~~p 173 (313)
++|+.|++.++++++|
T Consensus 103 ~~n~~g~~~~~~~~~~ 118 (246)
T 2ag5_A 103 NLNVRSMYLMIKAFLP 118 (246)
T ss_dssp HHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999998
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.03 E-value=1.9e-06 Score=79.12 Aligned_cols=64 Identities=13% Similarity=0.210 Sum_probs=57.4
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..++++++++++.+.+++|++|+||||||... ..++ .++|+.++++|+.|++.++++++|
T Consensus 92 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 160 (287)
T 3rku_A 92 AQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLP 160 (287)
T ss_dssp EECCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456888999999999999999999999999999865 4444 478999999999999999999998
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.03 E-value=4.7e-06 Score=75.29 Aligned_cols=92 Identities=11% Similarity=0.140 Sum_probs=70.7
Q ss_pred cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQR 152 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~ 152 (313)
++|.+|+.+++......+. ...+ + ....+|..+.++++++++.+.+.+|++|+||||||....+++ .++
T Consensus 53 ~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~ 131 (272)
T 1yb1_A 53 KLKSKLVLWDINKHGLEET-AAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQ 131 (272)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHH
T ss_pred HCCCEEEEEEcCHHHHHHH-HHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHH
Confidence 4577877776654332211 0111 1 124568889999999999999999999999999998877765 367
Q ss_pred hhhhhhcccccHHHHHHHHhhcc
Q psy2266 153 AETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 153 ~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
|+.++++|+.|++.+++.++|.|
T Consensus 132 ~~~~~~~N~~g~~~l~~~~~~~~ 154 (272)
T 1yb1_A 132 IEKTFEVNVLAHFWTTKAFLPAM 154 (272)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHH
Confidence 89999999999999999999976
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=3.5e-06 Score=75.46 Aligned_cols=94 Identities=14% Similarity=0.132 Sum_probs=71.2
Q ss_pred CCceEEEEecccccccCCCchhhh--------hhhcccCCCHHHHHHHHHHHHH--HcCCcc--EEEeccCcCCC--CCc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELR--------QTLFNESLTEDQLLDMMTDYVQ--YNGPLD--KILDTAMDTAP--GSF 149 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~--------~~~~~d~~~~~~~~~~~~~~~~--~~G~lD--~Linna~~~~~--~~~ 149 (313)
+|.+|+.+++......+.. ..+. ....+|..++++++++++.+.+ .+|++| +||||||.... .++
T Consensus 32 ~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~ 110 (259)
T 1oaa_A 32 PGSVMLVSARSESMLRQLK-EELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGF 110 (259)
T ss_dssp TTCEEEEEESCHHHHHHHH-HHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCG
T ss_pred CCCeEEEEeCCHHHHHHHH-HHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhccccccCCccEEEECCcccCCCCcch
Confidence 5778888776543332211 1111 1245788899999999999999 789999 99999998643 332
Q ss_pred -----chhhhhhhhcccccHHHHHHHHhhcccCC
Q psy2266 150 -----GQRAETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 150 -----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
.++|+.++++|+.|++.++++++|.|+++
T Consensus 111 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 144 (259)
T 1oaa_A 111 LNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDS 144 (259)
T ss_dssp GGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCC
T ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 36899999999999999999999999764
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.02 E-value=4.9e-06 Score=75.05 Aligned_cols=86 Identities=14% Similarity=0.106 Sum_probs=62.8
Q ss_pred cCCceEEEEecccccccCCCchhhh--------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR--------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG---- 150 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~--------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~---- 150 (313)
++|.+|+.+++......+.. .++. ....+|..++++++++ .+++|++|+||||||.....++.
T Consensus 32 ~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~~~D~~~~~~~~~~----~~~~g~id~lv~nAg~~~~~~~~~~~~ 106 (267)
T 3t4x_A 32 AEGANVLINGRREENVNETI-KEIRAQYPDAILQPVVADLGTEQGCQDV----IEKYPKVDILINNLGIFEPVEYFDIPD 106 (267)
T ss_dssp HTTCEEEEEESSHHHHHHHH-HHHHHHCTTCEEEEEECCTTSHHHHHHH----HHHCCCCSEEEECCCCCCCCCGGGSCH
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHhhCCCceEEEEecCCCCHHHHHHH----HHhcCCCCEEEECCCCCCCCccccCCH
Confidence 55778887776544332221 1111 1234577787776654 46799999999999998877763
Q ss_pred hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++|+.++++|+.|++.++++++|
T Consensus 107 ~~~~~~~~vN~~g~~~~~~~~~~ 129 (267)
T 3t4x_A 107 EDWFKLFEVNIMSGVRLTRSYLK 129 (267)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHH
Confidence 78999999999999999999998
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.02 E-value=2.4e-05 Score=70.61 Aligned_cols=72 Identities=15% Similarity=0.074 Sum_probs=48.0
Q ss_pred EEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEec
Q psy2266 14 HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVAS 93 (313)
Q Consensus 14 ~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS 93 (313)
+.+|++|.+++.++++. .++|++||+||..... ....+.....+++|+.++..+++++... .-.++|++||
T Consensus 43 ~~~D~~d~~~~~~~~~~-----~~~d~Vih~A~~~~~~--~~~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~v~~SS 113 (319)
T 4b8w_A 43 KDADLTDTAQTRALFEK-----VQPTHVIHLAAMVGGL--FRNIKYNLDFWRKNVHMNDNVLHSAFEV--GARKVVSCLS 113 (319)
T ss_dssp TTCCTTSHHHHHHHHHH-----SCCSEEEECCCCCCCH--HHHTTCHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEECC
T ss_pred eecccCCHHHHHHHHhh-----cCCCEEEECceecccc--cccccCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEEcc
Confidence 46899999988877764 2699999999985421 0111445667888888888888776442 1235666655
Q ss_pred c
Q psy2266 94 K 94 (313)
Q Consensus 94 ~ 94 (313)
.
T Consensus 114 ~ 114 (319)
T 4b8w_A 114 T 114 (319)
T ss_dssp G
T ss_pred h
Confidence 4
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.02 E-value=4.4e-06 Score=74.51 Aligned_cols=66 Identities=9% Similarity=-0.025 Sum_probs=59.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCc-cEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPL-DKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~l-D~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..+.++++++++.+.+.+|++ |+||||||....+++ .++|+.++++|+.|++.++++++|.|
T Consensus 68 ~~~D~~~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 138 (264)
T 2pd6_A 68 FQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQAL 138 (264)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EEecCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 4568889999999999999999999 999999998876654 36899999999999999999999965
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=98.01 E-value=6.2e-06 Score=72.57 Aligned_cols=66 Identities=18% Similarity=0.173 Sum_probs=59.1
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..+.++++++++.+.+.+|++|++|||||....+++ .++|+.++++|+.|++.+++.++|.|
T Consensus 57 ~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~ 126 (245)
T 2ph3_A 57 LGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLM 126 (245)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 4467789999999999999999999999999998876654 36899999999999999999999976
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=3e-05 Score=70.79 Aligned_cols=131 Identities=12% Similarity=0.057 Sum_probs=85.6
Q ss_pred ccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC-cchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccc
Q psy2266 112 NESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS-FGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM 190 (313)
Q Consensus 112 ~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~ 190 (313)
+|..+.+++.++++.. ++|+++|+|+...... ..++.+..+++|+.|+..+++++... .-+++|++||....
T Consensus 39 ~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~vy 111 (321)
T 1e6u_A 39 LNLLDSRAVHDFFASE-----RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSSCIY 111 (321)
T ss_dssp CCTTCHHHHHHHHHHH-----CCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGS
T ss_pred CCccCHHHHHHHHHhc-----CCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEccHHHc
Confidence 4666777777666543 7999999999754221 23566788999999999998887652 23689999997654
Q ss_pred cccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCC-CchhhhHHHHHHHHHHHHhhhccCCCCCCeEEE
Q psy2266 191 LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPE-FSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVN 269 (313)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn 269 (313)
-... . ..++++.. ......+. ..|+.+|.+...+++.++++. |++++
T Consensus 112 g~~~-~---------~~~~E~~~---------------~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~ 159 (321)
T 1e6u_A 112 PKLA-K---------QPMAESEL---------------LQGTLEPTNEPYAIAKIAGIKLCESYNRQY-------GRDYR 159 (321)
T ss_dssp CTTC-C---------SSBCGGGT---------------TSSCCCGGGHHHHHHHHHHHHHHHHHHHHH-------CCEEE
T ss_pred CCCC-C---------CCcCcccc---------------ccCCCCCCCCccHHHHHHHHHHHHHHHHHh-------CCCEE
Confidence 2110 0 00001000 00011222 369999999999996665432 79999
Q ss_pred eecccccccccc
Q psy2266 270 PVHPGYVNTDLT 281 (313)
Q Consensus 270 ~v~PG~v~T~~~ 281 (313)
.+.||.|-.+-.
T Consensus 160 ilrp~~v~G~~~ 171 (321)
T 1e6u_A 160 SVMPTNLYGPHD 171 (321)
T ss_dssp EEEECEEESTTC
T ss_pred EEEeCCcCCcCC
Confidence 999999877653
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=6.4e-06 Score=72.63 Aligned_cols=90 Identities=14% Similarity=0.102 Sum_probs=69.0
Q ss_pred cCCceEEEEecccccccCCCchhh------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~ 151 (313)
+++.+|+.+++......... ..+ + ....+|..++++++++++.+.+.+|++|++|||||.....++ .+
T Consensus 29 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~ 107 (248)
T 2pnf_A 29 SAGSTVIITGTSGERAKAVA-EEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLL 107 (248)
T ss_dssp HTTCEEEEEESSHHHHHHHH-HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHH
T ss_pred HCCCEEEEEeCChHHHHHHH-HHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHH
Confidence 45778887776543322111 111 1 124568889999999999999999999999999998776664 36
Q ss_pred hhhhhhhcccccHHHHHHHHhh
Q psy2266 152 RAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+|+..+++|+.|++.+++.++|
T Consensus 108 ~~~~~~~~N~~~~~~l~~~~~~ 129 (248)
T 2pnf_A 108 DWEEVLKVNLTGTFLVTQNSLR 129 (248)
T ss_dssp HHHHHHHHHTHHHHHHHHHHCH
T ss_pred HHHHHHhhhhHHHHHHHHHHHH
Confidence 8999999999999999999998
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=2.8e-06 Score=76.04 Aligned_cols=89 Identities=6% Similarity=0.038 Sum_probs=63.9
Q ss_pred cCCceEEEEecccccccCCCchhhhhh-hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcC-CCCCc----chhhhhh
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQT-LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDT-APGSF----GQRAETT 156 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~-~~~~~----~~~~~~~ 156 (313)
++|.+|+.+++......... . +... ......+.++++++++.+.+++|++|+||||||.. ..+++ .++|+.+
T Consensus 23 ~~G~~V~~~~r~~~~~~~~~-~-l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~ 100 (254)
T 1zmt_A 23 EAGHTVACHDESFKQKDELE-A-FAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGA 100 (254)
T ss_dssp HTTCEEEECCGGGGSHHHHH-H-HHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHH
T ss_pred HCCCEEEEEeCCHHHHHHHH-H-HHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHH
Confidence 45778887766543322110 1 1110 00000177788999999999999999999999987 65665 3689999
Q ss_pred hhcccccHHHHHHHHhh
Q psy2266 157 LATNFFALVTVCHILFP 173 (313)
Q Consensus 157 ~~~N~~g~~~~~~~~~p 173 (313)
+++|+.|++.++++++|
T Consensus 101 ~~~N~~g~~~~~~~~~~ 117 (254)
T 1zmt_A 101 VEALQIRPFALVNAVAS 117 (254)
T ss_dssp HHHHTHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHH
Confidence 99999999999999998
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.99 E-value=8.9e-06 Score=72.40 Aligned_cols=163 Identities=20% Similarity=0.234 Sum_probs=124.6
Q ss_pred cCCceEEEEecccccccCCCchhh------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~ 151 (313)
+++.+|+.+++......+. ...+ + ....+|..+.++++++++.+.+.+|++|+||||||....+++ .+
T Consensus 36 ~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~ 114 (265)
T 1h5q_A 36 AAGANVAVIYRSAADAVEV-TEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHE 114 (265)
T ss_dssp HTTEEEEEEESSCTTHHHH-HHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHH
T ss_pred HCCCeEEEEeCcchhhHHH-HHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHH
Confidence 4567887777643221111 1111 1 124568889999999999999999999999999999877765 36
Q ss_pred hhhhhhhcccccHHHHHHHHhhcccC---CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLLRP---HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGK 228 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l~~---~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (313)
+|+.++++|+.|++.++++++|.|++ .++||++||..+....+...
T Consensus 115 ~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~------------------------------- 163 (265)
T 1h5q_A 115 DFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL------------------------------- 163 (265)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET-------------------------------
T ss_pred HHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccc-------------------------------
Confidence 89999999999999999999999864 37899999988754221000
Q ss_pred cccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 229 DKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 229 ~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
....+...|++||+++..+++.++.++.+. ||+||+|+||+|.|++.+.
T Consensus 164 --~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~----gi~v~~v~Pg~v~t~~~~~ 212 (265)
T 1h5q_A 164 --NGSLTQVFYNSSKAACSNLVKGLAAEWASA----GIRVNALSPGYVNTDQTAH 212 (265)
T ss_dssp --TEECSCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCGGGGG
T ss_pred --cccccccccHHHHHHHHHHHHHHHHHHHhc----CcEEEEEecCccccccccc
Confidence 001124569999999999999999998866 9999999999999999765
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=6.5e-06 Score=72.95 Aligned_cols=95 Identities=11% Similarity=0.090 Sum_probs=70.0
Q ss_pred HHHhcc-cCCceEEEEecccccccCCCchhhh----hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc--
Q psy2266 77 ILFPLL-RPHARVVNVASKLGMLYNVPSQELR----QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF-- 149 (313)
Q Consensus 77 a~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~-- 149 (313)
+++..+ +++.+|+.+++......+.. ..++ ....+|..+.++++++++.+.+ +|++|+||||||....+++
T Consensus 26 ~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~id~li~~Ag~~~~~~~~~ 103 (254)
T 2wsb_A 26 EICRAFAASGARLILIDREAAALDRAA-QELGAAVAARIVADVTDAEAMTAAAAEAEA-VAPVSILVNSAGIARLHDALE 103 (254)
T ss_dssp HHHHHHHHTTCEEEEEESCHHHHHHHH-HHHGGGEEEEEECCTTCHHHHHHHHHHHHH-HSCCCEEEECCCCCCCBCSTT
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhcccceeEEEEecCCHHHHHHHHHHHHh-hCCCcEEEECCccCCCCCccc
Confidence 343333 45778887776543322211 1111 2245688899999999999999 9999999999998766654
Q ss_pred --chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 --GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 --~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.++|+.++++|+.|++.+++.++|
T Consensus 104 ~~~~~~~~~~~~N~~~~~~l~~~~~~ 129 (254)
T 2wsb_A 104 TDDATWRQVMAVNVDGMFWASRAFGR 129 (254)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 368999999999999999999998
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.98 E-value=7e-06 Score=74.64 Aligned_cols=64 Identities=14% Similarity=0.195 Sum_probs=57.7
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..+.++++++++.+.+.+|++|+||||||....+++ .++|+.++++|+.|++.+++.++|
T Consensus 98 ~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 165 (285)
T 2c07_A 98 YAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISK 165 (285)
T ss_dssp EECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4568889999999999999999999999999998766654 368999999999999999999998
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=97.97 E-value=8e-06 Score=72.05 Aligned_cols=64 Identities=13% Similarity=0.095 Sum_probs=50.0
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..++++++++++.+.+.+|++|++|||||....+++ .++|+..+++|+.|++.+++.++|
T Consensus 60 ~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 127 (247)
T 2hq1_A 60 AKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSK 127 (247)
T ss_dssp EESCTTSHHHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4568889999999999999999999999999998765554 368999999999999999999998
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.97 E-value=1.5e-05 Score=78.18 Aligned_cols=71 Identities=15% Similarity=0.179 Sum_probs=47.3
Q ss_pred CCceeEEEeecC------CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 8 NNNVRFHQLDIL------DQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 8 g~~~~~~~~Dvs------~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
+.++.++.+|++ +.++++++++ ++|+||||||..... .++..+++|+.++..+++++...
T Consensus 139 ~~~v~~v~~Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~~-------~~~~~~~~Nv~gt~~ll~aa~~~ 204 (478)
T 4dqv_A 139 ADRLEVVAGDKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNAF-------PYHELFGPNVAGTAELIRIALTT 204 (478)
T ss_dssp TTTEEEEECCTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSBS-------SCCEEHHHHHHHHHHHHHHHTSS
T ss_pred cCceEEEEeECCCcccCCCHHHHHHHHc-------CCCEEEECccccCCc-------CHHHHHHHHHHHHHHHHHHHHhC
Confidence 357899999998 4445555443 589999999986531 22345677888887777766441
Q ss_pred ccCCceEEEEecc
Q psy2266 82 LRPHARVVNVASK 94 (313)
Q Consensus 82 m~~~g~IV~isS~ 94 (313)
.-.++|++||.
T Consensus 205 --~~~~~V~iSS~ 215 (478)
T 4dqv_A 205 --KLKPFTYVSTA 215 (478)
T ss_dssp --SCCCEEEEEEG
T ss_pred --CCCeEEEEeeh
Confidence 12366666664
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=5.2e-06 Score=77.37 Aligned_cols=63 Identities=10% Similarity=0.056 Sum_probs=57.2
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 111 FNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 111 ~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.+|..+.++++++++.+.+++|++|+||||||....+++ .++|+.++++|+.|++.++++++|
T Consensus 70 ~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 136 (319)
T 1gz6_A 70 VANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWD 136 (319)
T ss_dssp EEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 467788889999999999999999999999999877665 378999999999999999999998
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.97 E-value=8.6e-06 Score=71.54 Aligned_cols=102 Identities=18% Similarity=0.174 Sum_probs=75.0
Q ss_pred HHHHhcc-cCC--ceEEEEecccccccCCCch-hhh-hhhcccCCCHHHHHHHHHHHHHHcC--CccEEEeccCcCC-CC
Q psy2266 76 HILFPLL-RPH--ARVVNVASKLGMLYNVPSQ-ELR-QTLFNESLTEDQLLDMMTDYVQYNG--PLDKILDTAMDTA-PG 147 (313)
Q Consensus 76 ra~~~~m-~~~--g~IV~isS~~~~~~~~~~~-~~~-~~~~~d~~~~~~~~~~~~~~~~~~G--~lD~Linna~~~~-~~ 147 (313)
++++..+ +++ .+|+.+++........... ..+ ....+|..++++++++++.+.+++| ++|+||||||... ..
T Consensus 17 ~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~ 96 (250)
T 1yo6_A 17 LGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYG 96 (250)
T ss_dssp HHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBC
T ss_pred HHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCc
Confidence 3444444 456 6888877654433211000 111 2346788899999999999999999 9999999999876 44
Q ss_pred Cc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 148 SF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 148 ~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
++ .++|+.++++|+.|++.++++++|.|++
T Consensus 97 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 130 (250)
T 1yo6_A 97 TNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKN 130 (250)
T ss_dssp TTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHH
T ss_pred ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 44 3789999999999999999999999865
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=97.95 E-value=6.7e-05 Score=68.45 Aligned_cols=151 Identities=11% Similarity=0.122 Sum_probs=93.7
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhh-hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhh
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQT-LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRA 153 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~ 153 (313)
++++..+ +++..|+.+++...... .. +.. ..+|.. .+++.+.++ ++|+++++|+..... +.
T Consensus 16 ~~l~~~L~~~g~~V~~~~r~~~~~~-~~----~~~~~~~Dl~-~~~~~~~~~-------~~d~Vih~a~~~~~~----~~ 78 (311)
T 3m2p_A 16 QYVVESIKNDGNTPIILTRSIGNKA-IN----DYEYRVSDYT-LEDLINQLN-------DVDAVVHLAATRGSQ----GK 78 (311)
T ss_dssp HHHHHHHHHTTCEEEEEESCCC----------CCEEEECCCC-HHHHHHHTT-------TCSEEEECCCCCCSS----SC
T ss_pred HHHHHHHHhCCCEEEEEeCCCCccc-CC----ceEEEEcccc-HHHHHHhhc-------CCCEEEEccccCCCC----Ch
Confidence 3344333 44677887776622221 11 222 344555 555554443 899999999986654 66
Q ss_pred hhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCC
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAG 233 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (313)
+..+++|+.|+..+++++... .-+++|++||....-.. .. ..+++ ....
T Consensus 79 ~~~~~~n~~~~~~ll~a~~~~--~~~r~v~~SS~~vyg~~-~~---------~~~~E-------------------~~~~ 127 (311)
T 3m2p_A 79 ISEFHDNEILTQNLYDACYEN--NISNIVYASTISAYSDE-TS---------LPWNE-------------------KELP 127 (311)
T ss_dssp GGGTHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGCCCG-GG---------CSBCT-------------------TSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHc--CCCEEEEEccHHHhCCC-CC---------CCCCC-------------------CCCC
Confidence 778999999998888887541 22579999996553211 00 00000 0012
Q ss_pred CCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccc
Q psy2266 234 WPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 234 ~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~ 281 (313)
.+...|+.+|.+...+++.++.+ +|++++.+.||.|-.+..
T Consensus 128 ~p~~~Y~~sK~~~E~~~~~~~~~-------~g~~~~ilRp~~v~G~~~ 168 (311)
T 3m2p_A 128 LPDLMYGVSKLACEHIGNIYSRK-------KGLCIKNLRFAHLYGFNE 168 (311)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHH-------SCCEEEEEEECEEECSCC
T ss_pred CCCchhHHHHHHHHHHHHHHHHH-------cCCCEEEEeeCceeCcCC
Confidence 33456999999999999665543 289999999999877653
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=97.94 E-value=1.7e-05 Score=72.48 Aligned_cols=78 Identities=22% Similarity=0.235 Sum_probs=63.1
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.++.+|++|.++++++++. +++|+||||||.... ... ++++..+++|+.++..+++++ +.+...+++
T Consensus 52 ~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~~~~~i 121 (321)
T 2pk3_A 52 NVEMISLDIMDSQRVKKVISD-----IKPDYIFHLAAKSSV----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSNLDCRI 121 (321)
T ss_dssp TEEEEECCTTCHHHHHHHHHH-----HCCSEEEECCSCCCH----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHTCCCEE
T ss_pred eeeEEECCCCCHHHHHHHHHh-----cCCCEEEEcCcccch----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhCCCCeE
Confidence 467789999999998887765 479999999997542 122 567889999999999999999 666556899
Q ss_pred EEEeccccc
Q psy2266 89 VNVASKLGM 97 (313)
Q Consensus 89 V~isS~~~~ 97 (313)
|++||....
T Consensus 122 v~~SS~~v~ 130 (321)
T 2pk3_A 122 LTIGSSEEY 130 (321)
T ss_dssp EEEEEGGGT
T ss_pred EEEccHHhc
Confidence 999998654
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=8e-06 Score=72.30 Aligned_cols=99 Identities=15% Similarity=0.176 Sum_probs=72.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ +++.+|+.+++........ ..++. ....+|..++++++++++.+.+++|++|++|||||.....+
T Consensus 25 ~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~ 103 (255)
T 1fmc_A 25 KEIAITFATAGASVVVSDINADAANHV-VDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKP 103 (255)
T ss_dssp HHHHHHHHTTTCEEEEEESCHHHHHHH-HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEcCCHHHHHHH-HHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence 3444433 4567888776654322111 11111 12356888999999999999999999999999999876655
Q ss_pred c---chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 149 F---GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 149 ~---~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+ .++|+..+++|+.|++.+++.++|.|
T Consensus 104 ~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 133 (255)
T 1fmc_A 104 FDMPMADFRRAYELNVFSFFHLSQLVAPEM 133 (255)
T ss_dssp TTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4 47889999999999999999999976
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=97.93 E-value=6.2e-06 Score=80.76 Aligned_cols=64 Identities=17% Similarity=0.195 Sum_probs=58.5
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCC-ccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGP-LDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~-lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..+.++++++++.+.+++|+ +|+||||||....+++. ++|+.++++|+.|++++++++.|
T Consensus 264 ~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~ 332 (454)
T 3u0b_A 264 LTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVG 332 (454)
T ss_dssp EECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEEecCCHHHHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466888999999999999999986 99999999999888763 78999999999999999999998
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.92 E-value=1.3e-05 Score=70.60 Aligned_cols=64 Identities=17% Similarity=0.211 Sum_probs=58.0
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..++++++++++.+.+++|++|+||||||....+++ .++|+.++++|+.|++.+++.++|
T Consensus 63 ~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 130 (244)
T 2bd0_A 63 ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFA 130 (244)
T ss_dssp EECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4568889999999999999999999999999999877665 368999999999999999999998
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.5e-06 Score=77.32 Aligned_cols=61 Identities=11% Similarity=0.106 Sum_probs=54.7
Q ss_pred CCHHHHHHHHHHHHHHcCCccEEEeccCcCCC---CCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 115 LTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP---GSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 115 ~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~---~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
.+.++++++++.+.+++|++|+||||||.... +++ .++|+.++++|+.|++.++++++|.|
T Consensus 54 ~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m 121 (244)
T 1zmo_A 54 LAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPL 121 (244)
T ss_dssp CCCCCGGGHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 37778889999999999999999999998776 665 37899999999999999999999977
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=1e-05 Score=72.59 Aligned_cols=92 Identities=12% Similarity=0.132 Sum_probs=68.7
Q ss_pred cCCceEEEEecccccccCCCchhh----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC--CCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP--GSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~--~~~----~~ 151 (313)
+++.+|+.+++........ ...+ + ....+|..++++++++++.+.+++|++|+||||||.... .++ .+
T Consensus 38 ~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~ 116 (278)
T 2bgk_A 38 RYGAKVVIADIADDHGQKV-CNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNE 116 (278)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHH
T ss_pred HCCCEEEEEcCChhHHHHH-HHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHH
Confidence 4577887776543322111 0011 1 224568889999999999999999999999999998643 333 37
Q ss_pred hhhhhhhcccccHHHHHHHHhhcc
Q psy2266 152 RAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+|+.++++|+.|++.++++++|.|
T Consensus 117 ~~~~~~~~n~~~~~~l~~~~~~~~ 140 (278)
T 2bgk_A 117 DFKRVMDINVYGAFLVAKHAARVM 140 (278)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHH
Confidence 899999999999999999999976
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.4e-05 Score=70.98 Aligned_cols=90 Identities=12% Similarity=0.136 Sum_probs=67.8
Q ss_pred cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~~~----~~ 151 (313)
+++.+|+.+++........ .+.+. ....+|..++++++++++.+.+++|++|++|||||... ..++ .+
T Consensus 35 ~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~ 113 (260)
T 3awd_A 35 EAGARVIIADLDEAMATKA-VEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDG 113 (260)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHH
T ss_pred HCCCEEEEEeCCHHHHHHH-HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHH
Confidence 4577888777654322111 11111 12456888999999999999999999999999999865 4443 36
Q ss_pred hhhhhhhcccccHHHHHHHHhh
Q psy2266 152 RAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+|+.++++|+.|++.++++++|
T Consensus 114 ~~~~~~~~n~~~~~~~~~~~~~ 135 (260)
T 3awd_A 114 QWLKQVDINLNGMFRSCQAVGR 135 (260)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHH
Confidence 7899999999999999999988
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=9.3e-06 Score=75.25 Aligned_cols=116 Identities=14% Similarity=0.035 Sum_probs=77.6
Q ss_pred cCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccch
Q psy2266 131 NGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTE 210 (313)
Q Consensus 131 ~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~ 210 (313)
++++|++++||+......+.++++..+++|+.|+..+++++... +.++|++||....-.. ... ..++
T Consensus 89 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~v~g~~-~~~---------~~~E 155 (343)
T 2b69_A 89 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV---GARLLLASTSEVYGDP-EVH---------PQSE 155 (343)
T ss_dssp CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH---TCEEEEEEEGGGGBSC-SSS---------SBCT
T ss_pred hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCcEEEECcHHHhCCC-CCC---------CCcc
Confidence 56899999999976544344567788999999999999887652 3589999997653211 000 0000
Q ss_pred HHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 211 DQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
+.. .......+...|+.||.+...+++.++++. |++++.+.||.|-.|.
T Consensus 156 ~~~--------------~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~ilrp~~v~G~~ 204 (343)
T 2b69_A 156 DYW--------------GHVNPIGPRACYDEGKRVAETMCYAYMKQE-------GVEVRVARIFNTFGPR 204 (343)
T ss_dssp TCC--------------CBCCSSSTTHHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECCEECTT
T ss_pred ccc--------------ccCCCCCCCCchHHHHHHHHHHHHHHHHHh-------CCcEEEEEEcceeCcC
Confidence 000 000011233459999999999997665442 7999999999988775
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.89 E-value=9.3e-06 Score=72.76 Aligned_cols=90 Identities=16% Similarity=0.114 Sum_probs=65.4
Q ss_pred cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHH-cCCccEEEeccC--cC-----CCCC
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQY-NGPLDKILDTAM--DT-----APGS 148 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~-~G~lD~Linna~--~~-----~~~~ 148 (313)
++|.+|+.+++........ ...+ + ....+|..++++++++++.+.++ +|++|+|||||| .. ...+
T Consensus 27 ~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~ 105 (260)
T 2qq5_A 27 KAGATVYITGRHLDTLRVV-AQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKA 105 (260)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCC
T ss_pred HCCCEEEEEeCCHHHHHHH-HHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCc
Confidence 4577887776654332211 1111 1 12456888999999999999987 999999999995 32 2233
Q ss_pred c----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 F----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 ~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+ .++|+.++++|+.|++.+++.++|
T Consensus 106 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 134 (260)
T 2qq5_A 106 FWETPASMWDDINNVGLRGHYFCSVYGAR 134 (260)
T ss_dssp TTTSCTTHHHHHHTTTTHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHhhcchhHHHHHHHHHH
Confidence 3 378999999999999999999988
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=97.89 E-value=8e-06 Score=73.05 Aligned_cols=90 Identities=11% Similarity=0.063 Sum_probs=64.6
Q ss_pred cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHc-CCccEEEeccCcCCCCCc----ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYN-GPLDKILDTAMDTAPGSF----GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~-G~lD~Linna~~~~~~~~----~~ 151 (313)
+++..|+.+++......+. ...+ + ....+|..+.++++++++.+.+.+ |++|+||||||....+++ .+
T Consensus 36 ~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~ 114 (266)
T 1xq1_A 36 GFGAVIHTCARNEYELNEC-LSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAE 114 (266)
T ss_dssp HTTCEEEEEESCHHHHHHH-HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHH
T ss_pred HCCCEEEEEeCCHHHHHHH-HHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHH
Confidence 4567777776654332211 0111 1 124568889999999999999999 999999999998766654 37
Q ss_pred hhhhhhhcccccHHHHHHHHhh
Q psy2266 152 RAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+|+.++++|+.|++.++++++|
T Consensus 115 ~~~~~~~~n~~g~~~l~~~~~~ 136 (266)
T 1xq1_A 115 DFSFHISTNLESAYHLSQLAHP 136 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHH
Confidence 8999999999999999999998
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=97.89 E-value=1.1e-05 Score=75.42 Aligned_cols=62 Identities=15% Similarity=0.159 Sum_probs=54.6
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+.+|..+.++++++++.+ .+|++|+||||||....+++. ++|+.++++|+.|++.++++++|
T Consensus 62 ~~~Dv~d~~~v~~~~~~~--~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p 127 (327)
T 1jtv_A 62 LQLDVRDSKSVAAARERV--TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLP 127 (327)
T ss_dssp EECCTTCHHHHHHHHHTC--TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEecCCCHHHHHHHHHHH--hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 456888999999999888 469999999999987766653 68999999999999999999998
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.88 E-value=4.5e-05 Score=75.00 Aligned_cols=72 Identities=14% Similarity=0.070 Sum_probs=53.3
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
..++.++.+|+++.+++. ...++|+||||||.... ...++..+++|+.++..+++++.+ ...+
T Consensus 210 ~~~v~~v~~Dl~d~~~l~--------~~~~~D~Vih~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~---~~~~ 272 (508)
T 4f6l_B 210 LSNIEVIVGDFECMDDVV--------LPENMDTIIHAGARTDH------FGDDDEFEKVNVQGTVDVIRLAQQ---HHAR 272 (508)
T ss_dssp STTEEEEEEBTTBCSSCC--------CSSCCSEEEECCCC--------------CCHHHHHHHHHHHHHHHHT---TTCE
T ss_pred cCceEEEecCCcccccCC--------CccCCCEEEECCceecC------CCCHHHHhhhHHHHHHHHHHHHHh---CCCc
Confidence 457889999999977765 45789999999998642 245677788999999999998876 4578
Q ss_pred EEEEecccc
Q psy2266 88 VVNVASKLG 96 (313)
Q Consensus 88 IV~isS~~~ 96 (313)
+|++||...
T Consensus 273 ~v~iSS~~v 281 (508)
T 4f6l_B 273 LIYVSTISV 281 (508)
T ss_dssp EEEEEESCT
T ss_pred EEEeCChhh
Confidence 888888664
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=97.87 E-value=1.9e-05 Score=69.52 Aligned_cols=64 Identities=13% Similarity=0.112 Sum_probs=57.8
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..++++++++++.+.+++|++|++|||||....+++ .++|+.++++|+.|++.+++.++|
T Consensus 56 ~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 123 (244)
T 1edo_A 56 FGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATK 123 (244)
T ss_dssp EECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3568889999999999999999999999999999877665 368999999999999999999998
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=97.87 E-value=9.8e-06 Score=73.10 Aligned_cols=90 Identities=9% Similarity=-0.034 Sum_probs=66.6
Q ss_pred cCCceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC-CCc-----c
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP-GSF-----G 150 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~-~~~-----~ 150 (313)
+++.+|+.+++......... ..+ + ....+|..+.++++++++.+.+.+|++|+||||||.... +++ .
T Consensus 56 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~ 134 (279)
T 3ctm_A 56 QAGADVAIWYNSHPADEKAE-HLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNY 134 (279)
T ss_dssp HHTCEEEEEESSSCCHHHHH-HHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHH
T ss_pred HCCCEEEEEeCCHHHHHHHH-HHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCH
Confidence 34677877766543221110 111 1 124568889999999999999999999999999998765 443 3
Q ss_pred hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++|+.++++|+.|++.+++.++|
T Consensus 135 ~~~~~~~~~N~~g~~~~~~~~~~ 157 (279)
T 3ctm_A 135 DSWNKIISVDLNGVYYCSHNIGK 157 (279)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHH
Confidence 67899999999999999999998
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=97.83 E-value=1.6e-05 Score=72.22 Aligned_cols=90 Identities=17% Similarity=0.164 Sum_probs=66.5
Q ss_pred cCCceEEEEecccccccCCCchhh------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEec-cCcCCCCCc---ch
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQEL------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDT-AMDTAPGSF---GQ 151 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linn-a~~~~~~~~---~~ 151 (313)
++|.+|+.+++......+.. ..+ + ....+|..+.++++++++.+.+.+|++|+|||| ||......+ .+
T Consensus 50 ~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~ 128 (286)
T 1xu9_A 50 KMGAHVVVTARSKETLQKVV-SHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIH 128 (286)
T ss_dssp HTTCEEEEEESCHHHHHHHH-HHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHH
T ss_pred HCCCEEEEEECCHHHHHHHH-HHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHH
Confidence 45778888776544332211 111 1 124568889999999999999999999999999 565433222 37
Q ss_pred hhhhhhhcccccHHHHHHHHhh
Q psy2266 152 RAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 152 ~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+|+.++++|+.|++.++++++|
T Consensus 129 ~~~~~~~vN~~g~~~l~~~~~~ 150 (286)
T 1xu9_A 129 HVRKSMEVNFLSYVVLTVAALP 150 (286)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHH
Confidence 8899999999999999999998
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=2.3e-05 Score=69.76 Aligned_cols=70 Identities=13% Similarity=0.124 Sum_probs=62.3
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
..+|..++++++++++.+.+++|++|+||||||.....++ .++|+.++++|+.|++.+++.++|.|++.+
T Consensus 62 ~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 135 (261)
T 1gee_A 62 VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEND 135 (261)
T ss_dssp EECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC
Confidence 4568889999999999999999999999999998876654 368999999999999999999999998654
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=3.3e-05 Score=70.95 Aligned_cols=77 Identities=14% Similarity=0.204 Sum_probs=62.6
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.++.+|++|.+++.++++.+ ++|+||||||.... +.+ ++++..+++|+.+++.+++++.+ +...+++
T Consensus 53 ~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~-~~~~~~i 122 (345)
T 2z1m_A 53 DVKIIHMDLLEFSNIIRTIEKV-----QPDEVYNLAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRT-VKPDTKF 122 (345)
T ss_dssp TEEECCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHH-HCTTCEE
T ss_pred ceeEEECCCCCHHHHHHHHHhc-----CCCEEEECCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHH-hCCCceE
Confidence 5778899999999998888765 79999999997531 122 67889999999999999999885 3324799
Q ss_pred EEEecccc
Q psy2266 89 VNVASKLG 96 (313)
Q Consensus 89 V~isS~~~ 96 (313)
|++||...
T Consensus 123 v~~SS~~v 130 (345)
T 2z1m_A 123 YQASTSEM 130 (345)
T ss_dssp EEEEEGGG
T ss_pred EEEechhh
Confidence 99999864
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.81 E-value=5.1e-06 Score=84.26 Aligned_cols=66 Identities=11% Similarity=0.058 Sum_probs=50.3
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+|..+.++++++++.+.+++|++|+||||||....+++ .++|+.++++|+.|++.++++++|.|
T Consensus 79 ~~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m 148 (613)
T 3oml_A 79 AVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYM 148 (613)
T ss_dssp EEECCCCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788899999999999999999999999999877775 37899999999999999999999977
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.79 E-value=2e-05 Score=70.42 Aligned_cols=100 Identities=16% Similarity=0.141 Sum_probs=74.7
Q ss_pred HHHHhcc-cCC---ceEEEEecccccccCCCchhh-----h-hhhcccCCCHHHHHHHHHHHHHHcC--CccEEEeccCc
Q psy2266 76 HILFPLL-RPH---ARVVNVASKLGMLYNVPSQEL-----R-QTLFNESLTEDQLLDMMTDYVQYNG--PLDKILDTAMD 143 (313)
Q Consensus 76 ra~~~~m-~~~---g~IV~isS~~~~~~~~~~~~~-----~-~~~~~d~~~~~~~~~~~~~~~~~~G--~lD~Linna~~ 143 (313)
++++..+ +.+ .+|+.+++........ ..+ + ....+|..+.++++++++.+.+.+| ++|+||||||.
T Consensus 35 ~~la~~L~~~G~~~~~V~~~~r~~~~~~~~--~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~ 112 (267)
T 1sny_A 35 LGLVKALLNLPQPPQHLFTTCRNREQAKEL--EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGI 112 (267)
T ss_dssp HHHHHHHHTSSSCCSEEEEEESCTTSCHHH--HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCC
T ss_pred HHHHHHHHhcCCCCcEEEEEecChhhhHHH--HHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCc
Confidence 3444433 445 6888877654432211 111 1 1245688899999999999999999 89999999998
Q ss_pred CC-CCCc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 144 TA-PGSF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 144 ~~-~~~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
.. .+++ .++|+.++++|+.|++.++++++|.|++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 151 (267)
T 1sny_A 113 APKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKK 151 (267)
T ss_dssp CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhh
Confidence 76 5554 3789999999999999999999999865
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.79 E-value=5.7e-05 Score=70.38 Aligned_cols=82 Identities=13% Similarity=0.094 Sum_probs=64.6
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccC-Cc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP-HA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~-~g 86 (313)
+.++.++.+|++|.+++.++++.+ ++|+||||||..... ...++++..+++|+.++..+++++.+.+.+ ++
T Consensus 54 ~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 125 (372)
T 1db3_A 54 NPKFHLHYGDLSDTSNLTRILREV-----QPDEVYNLGAMSHVA---VSFESPEYTADVDAMGTLRLLEAIRFLGLEKKT 125 (372)
T ss_dssp -CCEEECCCCSSCHHHHHHHHHHH-----CCSEEEECCCCCTTT---TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTC
T ss_pred CCceEEEECCCCCHHHHHHHHHhc-----CCCEEEECCcccCcc---ccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 346788899999999998887765 699999999985432 112456788999999999999999887643 47
Q ss_pred eEEEEeccccc
Q psy2266 87 RVVNVASKLGM 97 (313)
Q Consensus 87 ~IV~isS~~~~ 97 (313)
++|++||....
T Consensus 126 ~iv~~SS~~v~ 136 (372)
T 1db3_A 126 RFYQASTSELY 136 (372)
T ss_dssp EEEEEEEGGGG
T ss_pred EEEEeCChhhh
Confidence 99999997654
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.79 E-value=1.3e-05 Score=72.52 Aligned_cols=100 Identities=12% Similarity=0.004 Sum_probs=71.2
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEec-cCcCCCCCc-
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDT-AMDTAPGSF- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linn-a~~~~~~~~- 149 (313)
++++..+ ++|.+|+.+++......+.. ..++ ....+|..+.++++++++.+ +++|++|+++|| ||.....++
T Consensus 44 ~aia~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~id~lv~~aag~~~~~~~~ 121 (281)
T 3ppi_A 44 EATVRRLHADGLGVVIADLAAEKGKALA-DELGNRAEFVSTNVTSEDSVLAAIEAA-NQLGRLRYAVVAHGGFGVAQRIV 121 (281)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHCTTEEEEECCTTCHHHHHHHHHHH-TTSSEEEEEEECCCCCCCCCCSB
T ss_pred HHHHHHHHHCCCEEEEEeCChHHHHHHH-HHhCCceEEEEcCCCCHHHHHHHHHHH-HHhCCCCeEEEccCccccccccc
Confidence 3343333 45778887776544332221 1111 22466888999999999999 899999999999 444333322
Q ss_pred --------chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 150 --------GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 150 --------~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
.++|+.++++|+.|++.+++.++|.|++
T Consensus 122 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 157 (281)
T 3ppi_A 122 QRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAA 157 (281)
T ss_dssp CTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred ccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 2579999999999999999999999965
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=97.78 E-value=1.6e-06 Score=77.10 Aligned_cols=96 Identities=11% Similarity=0.036 Sum_probs=57.4
Q ss_pred HHHHhcccCCceEEEEecccccccCCCchhhhhh-hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----c
Q psy2266 76 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQT-LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----G 150 (313)
Q Consensus 76 ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~ 150 (313)
++++..+.+++.++.+++.......... ..+.. ..+|..+..+ .+.+....+++|++|+||||||....+++ .
T Consensus 19 ~~~a~~l~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~ 96 (245)
T 3e9n_A 19 IEIVKDLSRDHIVYALGRNPEHLAALAE-IEGVEPIESDIVKEVL-EEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSV 96 (245)
T ss_dssp HHHHHHHTTTSEEEEEESCHHHHHHHHT-STTEEEEECCHHHHHH-TSSSCGGGTTCSCCSEEEECC----------CHH
T ss_pred HHHHHHHhCCCeEEEEeCCHHHHHHHHh-hcCCcceecccchHHH-HHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCH
Confidence 3344444447788877765433222111 00111 2334444444 44555566788999999999999877765 3
Q ss_pred hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++|+.++++|+.|++.+++.++|
T Consensus 97 ~~~~~~~~~N~~~~~~l~~~~~~ 119 (245)
T 3e9n_A 97 AEWHAHLDLNVIVPAELSRQLLP 119 (245)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHH
Confidence 68999999999999999999998
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.75 E-value=7e-05 Score=70.17 Aligned_cols=82 Identities=11% Similarity=0.024 Sum_probs=64.6
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccC-Cc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP-HA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~-~g 86 (313)
+.++.++.+|++|.+++.++++.+ ++|+||||||..... ...++++..+++|+.++..+++++.+...+ .+
T Consensus 78 ~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~ 149 (375)
T 1t2a_A 78 EGNMKLHYGDLTDSTCLVKIINEV-----KPTEIYNLGAQSHVK---ISFDLAEYTADVDGVGTLRLLDAVKTCGLINSV 149 (375)
T ss_dssp --CEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHH---HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTC
T ss_pred CCCceEEEccCCCHHHHHHHHHhc-----CCCEEEECCCccccc---ccccCHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 346788999999999988887765 699999999975421 112678889999999999999999886643 37
Q ss_pred eEEEEeccccc
Q psy2266 87 RVVNVASKLGM 97 (313)
Q Consensus 87 ~IV~isS~~~~ 97 (313)
++|++||....
T Consensus 150 ~iv~~SS~~~~ 160 (375)
T 1t2a_A 150 KFYQASTSELY 160 (375)
T ss_dssp EEEEEEEGGGT
T ss_pred eEEEecchhhh
Confidence 99999997664
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.74 E-value=7.4e-05 Score=66.43 Aligned_cols=73 Identities=14% Similarity=0.116 Sum_probs=59.7
Q ss_pred EEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEec
Q psy2266 14 HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVAS 93 (313)
Q Consensus 14 ~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS 93 (313)
+.+|++|.++++++++.+ ++|+||||||..... ...++++..+++|+.++..+++++.+ .++++|++||
T Consensus 39 ~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~iv~~SS 107 (273)
T 2ggs_A 39 YKLDLTDFPRLEDFIIKK-----RPDVIINAAAMTDVD---KCEIEKEKAYKINAEAVRHIVRAGKV---IDSYIVHIST 107 (273)
T ss_dssp EECCTTSHHHHHHHHHHH-----CCSEEEECCCCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHH---TTCEEEEEEE
T ss_pred ceeccCCHHHHHHHHHhc-----CCCEEEECCcccChh---hhhhCHHHHHHHhHHHHHHHHHHHHH---hCCeEEEEec
Confidence 679999999998887764 699999999975421 12278899999999999999999875 3469999999
Q ss_pred cccc
Q psy2266 94 KLGM 97 (313)
Q Consensus 94 ~~~~ 97 (313)
....
T Consensus 108 ~~~~ 111 (273)
T 2ggs_A 108 DYVF 111 (273)
T ss_dssp GGGS
T ss_pred ceeE
Confidence 8765
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00016 Score=64.77 Aligned_cols=50 Identities=16% Similarity=0.100 Sum_probs=35.1
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHH
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILF 79 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~ 79 (313)
.+.++.+|++|.+++.++++ ++|++|||||... . + ++|+.++..+++++.
T Consensus 46 ~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~----~---~------~~n~~~~~~l~~a~~ 95 (287)
T 2jl1_A 46 GVEVRHGDYNQPESLQKAFA-------GVSKLLFISGPHY----D---N------TLLIVQHANVVKAAR 95 (287)
T ss_dssp TCEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCS----C---H------HHHHHHHHHHHHHHH
T ss_pred CCeEEEeccCCHHHHHHHHh-------cCCEEEEcCCCCc----C---c------hHHHHHHHHHHHHHH
Confidence 46778899999887776554 5899999998631 1 1 457777766666553
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 313 | ||||
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 1e-23 | |
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 7e-13 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 2e-11 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 1e-06 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 3e-10 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 1e-09 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 9e-05 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 3e-09 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 2e-07 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 4e-09 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 0.001 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 4e-09 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 5e-05 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 8e-09 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 9e-09 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 2e-08 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 0.001 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 2e-08 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 1e-04 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 3e-08 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 2e-06 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 4e-08 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 6e-08 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 0.003 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 1e-07 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 2e-07 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 0.002 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 7e-07 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 1e-06 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 4e-06 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 4e-06 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 7e-06 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 7e-06 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 8e-06 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 1e-05 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 2e-05 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 2e-05 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 4e-05 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 4e-05 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 6e-05 | |
| d1ulua_ | 256 | c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph | 7e-05 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 5e-04 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 6e-04 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 8e-04 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 9e-04 | |
| d1snya_ | 248 | c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly | 0.001 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 0.001 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 0.003 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 0.004 |
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.7 bits (237), Expect = 1e-23
Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 12/218 (5%)
Query: 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLD------MMTDYVQYNGPLDKILD 139
VV A + Q+L+ + + + D + + G LD +++
Sbjct: 29 GDVVLTARDVTRGQAA-VQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVN 87
Query: 140 TAMDTAPGSFGQRAE----TTLATNFFALVTVCHILFPLLRPHARVVNVASKLGML-YNV 194
A + T+ TNFF VC L PL++P RVVNV+S + +
Sbjct: 88 NAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKS 147
Query: 195 PSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQH 254
S EL+Q +E++TE++L+ +M +V+ K+G ++ GWP +Y V+K+GV LS I
Sbjct: 148 CSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHA 207
Query: 255 ATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
LS+ ++ I++N PG+V TD+ K +PE+G
Sbjct: 208 RKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEG 245
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.3 bits (158), Expect = 7e-13
Identities = 44/96 (45%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGS-FGQRAET 62
+ + RFHQLDI D SI L D ++ ++GGLD+LVNNAGI A + F +AE
Sbjct: 48 LQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEV 107
Query: 63 TLATNFFALVTVCHILFPLLRPHARVVNVASKLGML 98
T+ TNFF VC L PL++P RVVNV+S + +
Sbjct: 108 TMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVR 143
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.7 bits (147), Expect = 2e-11
Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETT 63
+ ++ D+ ++ I + I++QH G+D+ +NNAG+ R S +
Sbjct: 57 AGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDM 116
Query: 64 LATNFFALVTVCHILFPLLR----PHARVVNVASKLGM 97
N AL + ++ ++N+ S G
Sbjct: 117 FNVNVLALSICTREAYQSMKERNVDDGHIININSMSGH 154
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.8 bits (111), Expect = 1e-06
Identities = 32/239 (13%), Positives = 65/239 (27%), Gaps = 60/239 (25%)
Query: 81 LLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLT--------EDQLLDMMTDYVQYNG 132
L++ +VV A +G + + + E + + +L E+ +L M + +
Sbjct: 30 LVQQGLKVVGCARTVGNIEEL-AAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 88
Query: 133 PLDKILDTAMDTAPGSFGQRAE----TTLATNFFALVTVCHILFPLLR----PHARVVNV 184
+D ++ A P + + N AL + ++ ++N+
Sbjct: 89 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIINI 148
Query: 185 ASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244
S G YS +K
Sbjct: 149 NSMSGHRVL--------------------------------------PLSVTHFYSATKY 170
Query: 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKR 303
V L+ L + + I + PG V T L + + Y +
Sbjct: 171 AVTALTEGLRQELREAQTH--IRATCISPGVVETQFAFK---LHDKDPEKAAATYEQMK 224
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 57.6 bits (139), Expect = 3e-10
Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 3/103 (2%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA 60
+ +N V + D+ + + + G D+LVNNAGIY
Sbjct: 44 EAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQ 103
Query: 61 -ETTLATNFFALVTVCH--ILFPLLRPHARVVNVASKLGMLYN 100
+ T N + + + R++N+ S L
Sbjct: 104 WKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI 146
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 55.2 bits (133), Expect = 1e-09
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 3/94 (3%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNF 68
F Q+D+ D+ + ++ G +D+LVNNA I + + L N
Sbjct: 49 GGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNL 108
Query: 69 FALVTVCHILFPLL--RPHARVVNVASKLGMLYN 100
A + + + + +VNVAS G+
Sbjct: 109 TAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE 142
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 41.0 bits (96), Expect = 9e-05
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 232 AGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQ 291
A +Y+ SK G+ L+ +L+ D I VN V PG + T+ L+P+
Sbjct: 141 AEQENAAYNASKGGLVNLT----RSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDP 196
Query: 292 GKIRQKI 298
+ R+
Sbjct: 197 ERTRRDW 203
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 54.1 bits (129), Expect = 3e-09
Identities = 27/139 (19%), Positives = 47/139 (33%), Gaps = 24/139 (17%)
Query: 154 ETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQL 213
L N ++V + L PLL+ A + V
Sbjct: 107 AEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVI------------------ 148
Query: 214 LDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHP 273
++ + + A +P +Y +SK + TL+ D + +++V P
Sbjct: 149 --TISSGLGSITDNTSGSAQFPVLAYRMSKAAINMF----GRTLAVDLKDDNVLVVNFCP 202
Query: 274 GYVNTDLTEHKGVLTPEQG 292
G+V T+L LT EQ
Sbjct: 203 GWVQTNLGGKNAALTVEQS 221
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 49.1 bits (116), Expect = 2e-07
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHG--GLDLLVNNAGIYRDTAPGSFGQ 58
++ ++ V L + S+ + G GL LL+NNAG+ +
Sbjct: 43 TELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPN 102
Query: 59 RA--ETTLATNFFALVTVCHILFPLLRPHA 86
RA L N ++V + L PLL+ A
Sbjct: 103 RAVIAEQLDVNTTSVVLLTQKLLPLLKNAA 132
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 54.2 bits (130), Expect = 4e-09
Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 6/104 (5%)
Query: 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-----E 61
+ NV D+ + ++ + G LD+LVNNAG + G +
Sbjct: 55 SEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYD 114
Query: 62 TTLATNFFALVTVCHILFPLLRPH-ARVVNVASKLGMLYNVPSQ 104
TL N +++ + P L +VN++S L+ P
Sbjct: 115 ATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDF 158
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 37.6 bits (87), Expect = 0.001
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 5/73 (6%)
Query: 233 GWPEFS-YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQ 291
P+F YS++K + + + + D + I VN + PG V T G+
Sbjct: 154 ATPDFPYYSIAKAAIDQYT----RNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETS 209
Query: 292 GKIRQKIYLLKRT 304
K + +K
Sbjct: 210 KKFYSTMATMKEC 222
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.2 bits (130), Expect = 4e-09
Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 12/98 (12%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTL 64
+ F Q D+ DQ + + G LD+LVNNAG+ + E TL
Sbjct: 50 QFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNW-------EKTL 102
Query: 65 ATNFFALVTVCHILFPLLRPH-----ARVVNVASKLGM 97
N ++++ ++ + ++N++S G+
Sbjct: 103 QINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL 140
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.5 bits (97), Expect = 5e-05
Identities = 29/173 (16%), Positives = 59/173 (34%), Gaps = 53/173 (30%)
Query: 117 EDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLR 176
+ QL D V + G LD +++ A ++ E TL N ++++ ++ +
Sbjct: 66 QQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNW----EKTLQINLVSVISGTYLGLDYMS 121
Query: 177 PH-----ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKE 231
++N++S G++
Sbjct: 122 KQNGGEGGIIINMSSLAGLM---------------------------------------- 141
Query: 232 AGWPEFS-YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283
+ Y SK G+ F + A L+ + + +N + PG+VNT + E
Sbjct: 142 -PVAQQPVYCASKHGIV--GFTRSAALAANLMNSGVRLNAICPGFVNTAILES 191
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 53.1 bits (127), Expect = 8e-09
Identities = 19/99 (19%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QR 59
Q++ F + D+ ++ + +Q + G L++LVNNAGI + +
Sbjct: 44 QQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLED 103
Query: 60 AETTLATNFFALVTVCHILFPLLRPH-ARVVNVASKLGM 97
L N ++ C ++ ++N+AS
Sbjct: 104 FSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSW 142
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 53.1 bits (127), Expect = 9e-09
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
QK+ + + D+ + + KL + ++ + G LD +VN AGI R
Sbjct: 47 QKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRH 97
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 51.9 bits (124), Expect = 2e-08
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Query: 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF-GQRAETTL 64
+ ++F Q D D+ KL D + G + LVNNAGI + + L
Sbjct: 51 GTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLL 110
Query: 65 ATNFFALVTVCHILFPLL---RPHARVVNVASKLGMLYN 100
A N + + + A ++N++S G + +
Sbjct: 111 AVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD 149
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 37.7 bits (87), Expect = 0.001
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 233 GWPEFS-YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQ 291
G P Y+ SK V +S + A L + D+ VN VHPGY+ T L + + E+
Sbjct: 148 GDPSLGAYNASKGAVRIMS--KSAALDCALKDYDVRVNTVHPGYIKTPLVDD--LPGAEE 203
Query: 292 GKIRQKIYLLKR 303
++ +
Sbjct: 204 AMSQRTKTPMGH 215
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 52.3 bits (125), Expect = 2e-08
Identities = 20/103 (19%), Positives = 37/103 (35%), Gaps = 3/103 (2%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QR 59
KV + + + KL G +D++VNNAGI RD + +
Sbjct: 54 DKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDED 113
Query: 60 AETTLATNFFALVTVCHILFPLLRP--HARVVNVASKLGMLYN 100
+ + V + ++ + R++ AS G+ N
Sbjct: 114 WDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN 156
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 40.7 bits (95), Expect = 1e-04
Identities = 24/185 (12%), Positives = 53/185 (28%), Gaps = 55/185 (29%)
Query: 117 EDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQ----RAETTLATNFFALVTVCHILF 172
+ ++ + G +D +++ A SF + + + V +
Sbjct: 74 VEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAW 133
Query: 173 PLLRP--HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDK 230
++ + R++ AS G+
Sbjct: 134 DHMKKQNYGRIIMTASASGIY--------------------------------------- 154
Query: 231 EAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT-----EHKG 285
+ + +YS +KLG+ TL + R+ +I N + P + +
Sbjct: 155 -GNFGQANYSAAKLGLLG----LANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPEDLVE 209
Query: 286 VLTPE 290
L PE
Sbjct: 210 ALKPE 214
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.1 bits (122), Expect = 3e-08
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNA-GIYRDTAPGSFGQRAET 62
CK V +D ++ I+ ++ + G + +LVNNA +Y + + E
Sbjct: 51 CKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEK 110
Query: 63 TLATNFFALVTVCHILFPLL--RPHARVVNVASKLGML 98
T N A P + H +V VAS G +
Sbjct: 111 TFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV 148
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.7 bits (108), Expect = 2e-06
Identities = 25/187 (13%), Positives = 42/187 (22%), Gaps = 54/187 (28%)
Query: 117 EDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRA----ETTLATNFFALVTVCHILF 172
+ + G + +++ A E T N A
Sbjct: 68 REDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFL 127
Query: 173 PLL--RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDK 230
P + H +V VAS G +
Sbjct: 128 PAMTKNNHGHIVTVASAAGHV--------------------------------------- 148
Query: 231 EAGWPEFS-YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG---- 285
P Y SK L+ + + + P +VNT ++
Sbjct: 149 --SVPFLLAYCSSKFAAVGFHKTLTDELAALQIT-GVKTTCLCPNFVNTGFIKNPSTSLG 205
Query: 286 -VLTPEQ 291
L PE+
Sbjct: 206 PTLEPEE 212
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 51.2 bits (122), Expect = 4e-08
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-----E 61
+ V D+ + ++ + Q G +D+LVNNAG A G+ G
Sbjct: 55 SEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYH 114
Query: 62 TTLATNFFALVTVCHILFP 80
TL N A++ + + P
Sbjct: 115 KTLKLNLQAVIEMTKKVKP 133
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 50.4 bits (120), Expect = 6e-08
Identities = 19/103 (18%), Positives = 41/103 (39%), Gaps = 3/103 (2%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QR 59
+ + R+ LD+ + ++ + + G +D LVNNAGI + +R
Sbjct: 43 AATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVER 102
Query: 60 AETTLATNFFALVTVCHILFPLLRP--HARVVNVASKLGMLYN 100
+ N + + P ++ +VN++S G++
Sbjct: 103 FRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL 145
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 36.1 bits (83), Expect = 0.003
Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 7/70 (10%)
Query: 234 WPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGK 293
SY SK GV LS + + I VN VHPG T +T G QG+
Sbjct: 146 ALTSSYGASKWGVRGLS----KLAAVELGTDRIRVNSVHPGMTYTPMTAETG---IRQGE 198
Query: 294 IRQKIYLLKR 303
+ R
Sbjct: 199 GNYPNTPMGR 208
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 49.6 bits (118), Expect = 1e-07
Identities = 9/44 (20%), Positives = 21/44 (47%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP 53
+ QL + + +L + + + +G +D+LV+N + P
Sbjct: 44 AETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQP 87
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 49.2 bits (117), Expect = 2e-07
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGG-LDLLVNNAGIYRDTAPGSFGQRA-E 61
+ V D + KL + + GG LD+L+NN G R +
Sbjct: 52 WQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFS 111
Query: 62 TTLATNFFALVTVCHILFPLLRPH 85
++TN + + + PLL+
Sbjct: 112 FHISTNLESAYHLSQLAHPLLKAS 135
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 36.9 bits (85), Expect = 0.002
Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 6/72 (8%)
Query: 232 AGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQ 291
+ YS +K + +L+ L+ + I N V P + T L E V E
Sbjct: 151 SASVGSIYSATKGALNQLA----RNLACEWASDGIRANAVAPAVIATPLAE--AVYDDEF 204
Query: 292 GKIRQKIYLLKR 303
K+ L R
Sbjct: 205 KKVVISRKPLGR 216
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 47.4 bits (112), Expect = 7e-07
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD 50
+ + + R+ LD+ + D T GGL +LVNNAGI
Sbjct: 44 KAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNI 93
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 46.6 bits (110), Expect = 1e-06
Identities = 12/49 (24%), Positives = 20/49 (40%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA 52
+ + DI + + L D ++ G +D+LVNNAG
Sbjct: 55 IQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKP 103
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 45.1 bits (106), Expect = 4e-06
Identities = 11/49 (22%), Positives = 18/49 (36%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP 53
+ V D+ D++ + + G +D NNAGI P
Sbjct: 51 TAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNP 99
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 45.1 bits (106), Expect = 4e-06
Identities = 20/102 (19%), Positives = 35/102 (34%), Gaps = 1/102 (0%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQ-RAET 62
K Q DI S + L D + GGLD +++N+G+ Q +
Sbjct: 51 LKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDK 110
Query: 63 TLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQ 104
N V R R++ +S ++ +P+
Sbjct: 111 VFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNH 152
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (104), Expect = 7e-06
Identities = 34/196 (17%), Positives = 63/196 (32%), Gaps = 53/196 (27%)
Query: 117 EDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRA-----ETTLATNFFALVTVCHIL 171
ED + ++++ ++ G LD +++ A P + L N T+ +
Sbjct: 63 EDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLA 122
Query: 172 FPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDK 230
P LR V+N++S +G +
Sbjct: 123 LPYLRKSQGNVINISSLVGAIGQ------------------------------------- 145
Query: 231 EAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPE 290
Y +K V ++ L+ D+ + VN + PG + T L E L P+
Sbjct: 146 ---AQAVPYVATKGAVTAMT----KALALDESPYGVRVNCISPGNIWTPLWEELAALMPD 198
Query: 291 QGKIRQKIYL---LKR 303
++ L L R
Sbjct: 199 PRASIREGMLAQPLGR 214
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (104), Expect = 7e-06
Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 3/102 (2%)
Query: 2 KVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA- 60
+ + F D+ + + L + + G LD +VNNAG +
Sbjct: 44 RALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQG 103
Query: 61 -ETTLATNFFALVTVCHILFPLLRP-HARVVNVASKLGMLYN 100
L N T+ + P LR V+N++S +G +
Sbjct: 104 FRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ 145
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 44.2 bits (104), Expect = 8e-06
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGG-LDLLVNNAGIYRDTAPGSFGQRA-E 61
++ V D+ +S +L + + G L++LVNNAGI +
Sbjct: 52 WRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYS 111
Query: 62 TTLATNFFALVTVCHILFPLLRPHARVVNV 91
++ NF A + + P L+ R V
Sbjct: 112 LIMSINFEAAYHLSVLAHPFLKASERGNVV 141
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 43.5 bits (102), Expect = 1e-05
Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
Query: 1 QKVCK--NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQ 58
QKVC + + + F D+ + L D +HG LD++ N G+ T
Sbjct: 44 QKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEA 103
Query: 59 RAET---TLATNFFALVTVCHILFPLLRPHAR 87
E + N + V ++ P +
Sbjct: 104 GNEDFKRVMDINVYGAFLVAKHAARVMIPAKK 135
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 43.1 bits (101), Expect = 2e-05
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
+D+ D +S+ + + G LD +V+ AGI RD
Sbjct: 50 GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDN 91
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 42.7 bits (100), Expect = 2e-05
Identities = 25/196 (12%), Positives = 48/196 (24%), Gaps = 56/196 (28%)
Query: 114 SLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFP 173
++ + ++ +D +++ A E T+A NF LV +
Sbjct: 65 TVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQI----ERTIAINFTGLVNTTTAILD 120
Query: 174 LLR-----PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGK 228
P + N+ S G
Sbjct: 121 FWDKRKGGPGGIIANICSVTGF-------------------------------------- 142
Query: 229 DKEAGWPEFS-YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVL 287
+ YS SK V + +L+K + ++PG T L
Sbjct: 143 ---NAIHQVPVYSASKAAVVSFT----NSLAKLAPITGVTAYSINPGITRTPLVHTFNS- 194
Query: 288 TPEQGKIRQKIYLLKR 303
+ ++ L
Sbjct: 195 WLDVEPRVAELLLSHP 210
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 41.9 bits (98), Expect = 4e-05
Identities = 16/95 (16%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Query: 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF-GQRAETTLATN 67
+ +D+ D + K I G +DLLVNNA + + + + + N
Sbjct: 50 PGIEPVCVDLGDWDATEKALGGI----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVN 105
Query: 68 FFALVTVCHILFPLLRPHARVVNVASKLGMLYNVP 102
++ V ++ + ++ + M+ +V
Sbjct: 106 LRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT 140
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 42.0 bits (98), Expect = 4e-05
Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 4/107 (3%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QR 59
+KV K + +Q D+ + + K I G + L+ NAG+ +
Sbjct: 51 EKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHED 110
Query: 60 AETTLATNFFALVTVCHILFPL---LRPHARVVNVASKLGMLYNVPS 103
N F + C + L + +V +S + N S
Sbjct: 111 FAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS 157
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 41.6 bits (97), Expect = 6e-05
Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAE---TTLAT 66
+ D+ + S + + + G +D+LVNNAG + Q E T
Sbjct: 57 KINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKL 116
Query: 67 NFFALVTVCHILFP 80
NF A++ +
Sbjct: 117 NFQAVIEMTQKTKE 130
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Score = 41.4 bits (96), Expect = 7e-05
Identities = 19/99 (19%), Positives = 30/99 (30%), Gaps = 5/99 (5%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGS-----FGQ 58
+ D+ + L ++ GGLD LV+ A Q
Sbjct: 53 LAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQ 112
Query: 59 RAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM 97
L + ++LV V PLLR +V +
Sbjct: 113 DWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE 151
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 38.6 bits (89), Expect = 5e-04
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA 52
K + D+ +S + L + G LD+++NNAG+ +
Sbjct: 52 IKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVS 100
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 38.6 bits (89), Expect = 6e-04
Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 1/102 (0%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ET 62
K N ++ + ++ I ++ ++ G LD++ +N+G+ +
Sbjct: 63 IKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDR 122
Query: 63 TLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQ 104
N V + L R++ + S G VP
Sbjct: 123 VFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKH 164
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.2 bits (88), Expect = 8e-04
Identities = 9/54 (16%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Query: 233 GWPEFS-YSVSKLGVAKLSFIQHATLSKD--KRRPDIIVNPVHPGYVNTDLTEH 283
+P + YS SK + +++ K+ R ++ + G ++T+
Sbjct: 156 AYPMVAAYSASKFALDGFF----SSIRKEYSVSRVNVSITLCVLGLIDTETAMK 205
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.9 bits (87), Expect = 9e-04
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Query: 233 GWPEFS-YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQ 291
G P Y SK + L +L+ + ++ + G V+T E K + +PE+
Sbjct: 148 GLPFNDVYCASKFALEGLC----ESLAVLLLPFGVHLSLIECGPVHTAFME-KVLGSPEE 202
Query: 292 GKIRQKIYLLKRTNKF 307
R I+ R ++
Sbjct: 203 VLDRTDIHTFHRFYQY 218
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 37.4 bits (85), Expect = 0.001
Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 237 FSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
++Y SK + + L + I+ +HPG+V TD+ L
Sbjct: 168 YAYRTSKSALNAATKSLSVDLYPQR----IMCVSLHPGWVKTDMGGSSAPLDVPTS 219
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 37.5 bits (86), Expect = 0.001
Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETT 63
+ ++D+ D+ + + + GG D++VNNAG+ T S
Sbjct: 45 INQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDK 104
Query: 64 -LATNFFALVTVCHILFP 80
N ++
Sbjct: 105 VYNINVKGVIWGIQAAVE 122
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.6 bits (84), Expect = 0.003
Identities = 16/105 (15%), Positives = 30/105 (28%), Gaps = 1/105 (0%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QR 59
+ V Q +I ++ ++ L G ++ LVNN G + +
Sbjct: 58 ANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKG 117
Query: 60 AETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQ 104
L TN +C ++ V + P
Sbjct: 118 WHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLA 162
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 35.9 bits (82), Expect = 0.004
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
Query: 233 GWPEFS-YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283
G P + Y SK + L+ T + D +I VN + PGY+
Sbjct: 148 GPPNMAAYGTSKGAIIALT----ETAALDLAPYNIRVNAISPGYMGPGFMWE 195
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 313 | |||
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.97 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.97 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.97 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.97 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.97 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.97 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.97 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.97 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.97 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.97 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.97 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.97 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.97 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.97 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.97 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.97 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.97 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.97 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.96 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.96 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.96 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.96 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.96 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.96 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.96 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.96 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.95 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.95 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.95 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.95 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.95 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.95 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.95 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.95 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.94 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.94 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.94 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.94 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.94 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.94 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.94 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.94 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.93 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.93 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.93 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.93 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.93 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.93 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.92 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.92 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.91 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.9 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.9 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.89 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.88 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.88 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.86 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.86 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.85 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.84 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.8 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.79 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.78 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.78 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.74 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.68 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.31 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.2 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.14 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.09 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.08 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.02 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.01 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 98.99 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 98.95 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 98.94 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 98.91 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 98.9 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.9 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 98.89 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 98.87 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 98.85 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.84 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 98.84 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 98.83 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 98.83 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 98.82 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.82 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 98.77 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 98.77 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 98.75 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 98.75 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 98.75 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 98.74 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 98.73 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 98.7 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 98.7 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 98.69 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 98.67 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 98.66 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 98.66 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 98.66 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 98.66 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 98.63 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.62 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.61 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 98.61 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 98.61 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.6 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 98.59 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.58 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 98.57 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 98.57 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.37 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.36 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 98.29 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.19 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 98.06 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 97.99 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 97.9 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 97.89 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 97.79 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 97.72 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 97.55 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 97.5 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 97.5 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 97.48 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 97.47 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 97.36 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 97.12 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 97.04 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 96.76 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 96.75 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 96.66 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 96.61 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 96.55 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 96.48 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 96.39 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 96.09 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 96.01 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 95.76 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 95.74 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 95.62 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 95.62 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 95.36 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 95.31 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 95.03 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 94.92 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 94.81 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 94.77 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 94.5 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 94.44 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 94.41 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 94.39 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 93.94 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 93.87 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 91.23 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 89.51 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 88.98 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 88.88 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 87.88 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 85.4 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 84.32 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 84.21 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 81.52 |
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.97 E-value=1.5e-32 Score=247.64 Aligned_cols=167 Identities=21% Similarity=0.284 Sum_probs=138.9
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
++++.|.++.+++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|++++++++|++.|.
T Consensus 45 ~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 124 (244)
T d1edoa_ 45 QIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKI 124 (244)
T ss_dssp HHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 3456788999999999999999999999999999999999999999888887777 899999988888888888888887
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++
T Consensus 125 m~~----------------------------------------------------------------------------- 127 (244)
T d1edoa_ 125 MMK----------------------------------------------------------------------------- 127 (244)
T ss_dssp HHH-----------------------------------------------------------------------------
T ss_pred HHH-----------------------------------------------------------------------------
Confidence 754
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
+++|+||++||.++.. +..+..+|++
T Consensus 128 --------------~~~G~IVnisS~~~~~----------------------------------------~~~~~~~Y~a 153 (244)
T d1edoa_ 128 --------------KRKGRIINIASVVGLI----------------------------------------GNIGQANYAA 153 (244)
T ss_dssp --------------HTCEEEEEECCTHHHH----------------------------------------CCTTCHHHHH
T ss_pred --------------cCCcEEEEEcChhhcC----------------------------------------CCCCCHHHHH
Confidence 2236667777766654 1233456999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
||+|+.+|+|.|+.|++++ |||||+|+||+|+|||.+.. .++..+......|++|+++.
T Consensus 154 sKaal~~ltk~lA~el~~~----gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~pl~R~~~p 212 (244)
T d1edoa_ 154 AKAGVIGFSKTAAREGASR----NINVNVVCPGFIASDMTAKL---GEDMEKKILGTIPLGRTGQP 212 (244)
T ss_dssp HHHHHHHHHHHHHHHHHTT----TEEEEEEEECSBCSHHHHTT---CHHHHHHHHTSCTTCSCBCH
T ss_pred HHHHHHHChHHHHHHHhhh----CcEEEEEecceeccHHHHHh---hHHHHHHHHhcCCCCCCcCH
Confidence 9999999999999999877 99999999999999998773 45555666777899998875
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.97 E-value=9e-32 Score=243.53 Aligned_cols=170 Identities=26% Similarity=0.302 Sum_probs=139.5
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
.++.|.++.+++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|+.++++++|+++|.|
T Consensus 50 ~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m 129 (251)
T d1vl8a_ 50 TEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLL 129 (251)
T ss_dssp HHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcc
Confidence 345688899999999999999999999999999999999999998877888777 9999999999999988888888888
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
+++
T Consensus 130 ~~~----------------------------------------------------------------------------- 132 (251)
T d1vl8a_ 130 RES----------------------------------------------------------------------------- 132 (251)
T ss_dssp TTC-----------------------------------------------------------------------------
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 652
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
++|+||+++|..+.... .....+|++|
T Consensus 133 --------------~~G~Ii~i~S~~~~~~~---------------------------------------~~~~~~Y~as 159 (251)
T d1vl8a_ 133 --------------DNPSIINIGSLTVEEVT---------------------------------------MPNISAYAAS 159 (251)
T ss_dssp --------------SSCEEEEECCGGGTCCC---------------------------------------SSSCHHHHHH
T ss_pred --------------ccccccccccchhcccc---------------------------------------CccccchHHH
Confidence 23566666665543311 1233469999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
|+|+..|+|.++.|++++ |||||+|+||+|+|||.+... ..++..+......|++|+++..
T Consensus 160 Kaal~~lt~~lA~e~~~~----gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~pl~R~~~pe 220 (251)
T d1vl8a_ 160 KGGVASLTKALAKEWGRY----GIRVNVIAPGWYRTKMTEAVF-SDPEKLDYMLKRIPLGRTGVPE 220 (251)
T ss_dssp HHHHHHHHHHHHHHHGGG----TCEEEEEEECCBCSTTTHHHH-TCHHHHHHHHHTCTTSSCBCGG
T ss_pred HHhHHHHHHHHHHHhccc----CeEEEEEeeCcccCHHHHhcc-CCHHHHHHHHhcCCCCCCCCHH
Confidence 999999999999999877 999999999999999987642 3456666777888999998764
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.97 E-value=1.3e-31 Score=242.27 Aligned_cols=168 Identities=24% Similarity=0.292 Sum_probs=135.4
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
++++.|.++..++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|+.++++++|++.|.
T Consensus 53 ~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 132 (251)
T d2c07a1 53 EIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKR 132 (251)
T ss_dssp HHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcc
Confidence 4566788999999999999999999999999999999999999998888777776 888888888888888888877777
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++
T Consensus 133 m~~----------------------------------------------------------------------------- 135 (251)
T d2c07a1 133 MIN----------------------------------------------------------------------------- 135 (251)
T ss_dssp HHH-----------------------------------------------------------------------------
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 654
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
+++|+||++||.++.. +.....+|++
T Consensus 136 --------------~~~G~IVnisS~~~~~----------------------------------------~~~~~~~Y~a 161 (251)
T d2c07a1 136 --------------NRYGRIINISSIVGLT----------------------------------------GNVGQANYSS 161 (251)
T ss_dssp --------------HTCEEEEEECCTHHHH----------------------------------------CCTTCHHHHH
T ss_pred --------------CCCeEEEEECCHHhcC----------------------------------------CCCCCHHHHH
Confidence 2236777777777654 1233456999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
||+|+.+|+|.++.|++++ |||||+|+||+|+|+|.+.. .++..+......|++|+++..
T Consensus 162 sKaal~~ltr~lA~el~~~----gIrVN~V~PG~v~T~~~~~~---~~~~~~~~~~~~pl~R~~~pe 221 (251)
T d2c07a1 162 SKAGVIGFTKSLAKELASR----NITVNAIAPGFISSDMTDKI---SEQIKKNIISNIPAGRMGTPE 221 (251)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCC-----C---CHHHHHHHHTTCTTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHhhhh----CeEEEEEccCCEeccccccc---CHHHHHHHHhcCCCCCCcCHH
Confidence 9999999999999999887 99999999999999998763 556666777788999988753
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.97 E-value=1.3e-31 Score=241.92 Aligned_cols=168 Identities=20% Similarity=0.227 Sum_probs=125.1
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
++++.|.++..++||++|+++++++++.+.++||+||+||||||+....++++++ ++|++++++|++++++++|++.|.
T Consensus 46 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~ 125 (247)
T d2ew8a1 46 AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPG 125 (247)
T ss_dssp HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhH
Confidence 4567788999999999999999999999999999999999999999888887777 899999988888888888888887
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++
T Consensus 126 m~~----------------------------------------------------------------------------- 128 (247)
T d2ew8a1 126 MKR----------------------------------------------------------------------------- 128 (247)
T ss_dssp HHH-----------------------------------------------------------------------------
T ss_pred HHh-----------------------------------------------------------------------------
Confidence 754
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
+++|+||++||.++.. +.....+|++
T Consensus 129 --------------~~~G~Iv~isS~~~~~----------------------------------------~~~~~~~Y~a 154 (247)
T d2ew8a1 129 --------------NGWGRIINLTSTTYWL----------------------------------------KIEAYTHYIS 154 (247)
T ss_dssp --------------HTCEEEEEECCGGGGS----------------------------------------CCSSCHHHHH
T ss_pred --------------cCCCCccccccchhcc----------------------------------------cCcccccchh
Confidence 1235666666666644 1223456999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhh-hhhhhhhcccCCcc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGK-IRQKIYLLKRTNKF 307 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~l~r~~~~ 307 (313)
||+|+..|+|.++.|++++ |||||+|+||+|+|||.+.... +...+ ......|++|+|+.
T Consensus 155 sKaal~~ltk~lA~ela~~----gIrVN~I~PG~i~T~~~~~~~~--~~~~~~~~~~~~~l~r~~~p 215 (247)
T d2ew8a1 155 TKAANIGFTRALASDLGKD----GITVNAIAPSLVRTATTEASAL--SAMFDVLPNMLQAIPRLQVP 215 (247)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TEEEEEEEECCC--------------------CTTSSSCSCCCT
T ss_pred hhccHHHHHHHHHHHhccc----CeEEEEEeeCCCCCcccccccc--chhHHHHHHHhccCCCCCCH
Confidence 9999999999999999887 9999999999999999876421 11111 12233578887764
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=6.7e-32 Score=243.29 Aligned_cols=167 Identities=23% Similarity=0.328 Sum_probs=137.8
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
.++++.++..++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|+.+++.++|+++|.|
T Consensus 45 ~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m 124 (243)
T d1q7ba_ 45 SDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAM 124 (243)
T ss_dssp HHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHH
Confidence 345577889999999999999999999999999999999999999888887776 8999999888888888888888877
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++
T Consensus 125 ~~------------------------------------------------------------------------------ 126 (243)
T d1q7ba_ 125 MK------------------------------------------------------------------------------ 126 (243)
T ss_dssp HH------------------------------------------------------------------------------
T ss_pred HH------------------------------------------------------------------------------
Confidence 54
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
+++|+||++||.++.. +.....+|++|
T Consensus 127 -------------~~~G~II~isS~~~~~----------------------------------------~~~~~~~Y~as 153 (243)
T d1q7ba_ 127 -------------KRHGRIITIGSVVGTM----------------------------------------GNGGQANYAAA 153 (243)
T ss_dssp -------------HTCEEEEEECCHHHHH----------------------------------------CCTTCHHHHHH
T ss_pred -------------cCCCEeeeecchhhcC----------------------------------------CCCCCHHHHHH
Confidence 2236666666666654 12334569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
|+|+.+|+|.++.|++++ |||||+|+||+|+|||.+.. .++..+......|++|+++..
T Consensus 154 Kaal~~lt~~lA~ela~~----gIrVN~I~PG~i~T~~~~~~---~~~~~~~~~~~~pl~R~~~pe 212 (243)
T d1q7ba_ 154 KAGLIGFSKSLAREVASR----GITVNVVAPGFIETDMTRAL---SDDQRAGILAQVPAGRLGGAQ 212 (243)
T ss_dssp HHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHTS---CHHHHHHHHTTCTTSSCBCHH
T ss_pred HHHHHHHHHHHHHHhCcc----CeEEEEEecceEechhhhhh---hhhHHHHHHhcCCCCCCCCHH
Confidence 999999999999999887 99999999999999998773 455556667788999988753
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=2.9e-31 Score=240.67 Aligned_cols=169 Identities=20% Similarity=0.191 Sum_probs=138.5
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
++++.|+++.+++||++|+++++++++.+.++||+||+||||||+....+++...++|++++++|++++++++|++.|.|
T Consensus 54 ~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m 133 (255)
T d1fmca_ 54 EIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEM 133 (255)
T ss_dssp HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhh
Confidence 45667889999999999999999999999999999999999999988776644448899999888888888888887777
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++
T Consensus 134 ~~------------------------------------------------------------------------------ 135 (255)
T d1fmca_ 134 EK------------------------------------------------------------------------------ 135 (255)
T ss_dssp HH------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 54
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
.++|+||++||.++.. +..+..+|++|
T Consensus 136 -------------~~~g~Ii~isS~~~~~----------------------------------------~~~~~~~Y~as 162 (255)
T d1fmca_ 136 -------------NGGGVILTITSMAAEN----------------------------------------KNINMTSYASS 162 (255)
T ss_dssp -------------HTCEEEEEECCGGGTC----------------------------------------CCTTCHHHHHH
T ss_pred -------------ccccccccccccchhc----------------------------------------cccccccchhH
Confidence 1235666666666654 12334569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
|+|+.+|+|.++.|++++ |||||+|+||+|+||+.+.. .+++..+......|++|+|+..
T Consensus 163 Kaal~~lt~~lA~el~~~----gIrVN~I~PG~i~T~~~~~~--~~~e~~~~~~~~~pl~R~g~pe 222 (255)
T d1fmca_ 163 KAAASHLVRNMAFDLGEK----NIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTPIRRLGQPQ 222 (255)
T ss_dssp HHHHHHHHHHHHHHHHTT----TEEEEEEEECSBCSHHHHTT--CCHHHHHHHHHTCSSCSCBCHH
T ss_pred HHHHHHHHHHHHHHhCcc----CeEEEEeeeCcCcChHhhcc--CCHHHHHHHHhcCCCCCCcCHH
Confidence 999999999999999877 99999999999999998764 4566667777888999998763
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.97 E-value=2.1e-31 Score=241.43 Aligned_cols=172 Identities=24% Similarity=0.225 Sum_probs=138.3
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
++++.|.++.+++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|++++++++|++.|.
T Consensus 45 ~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~ 124 (257)
T d2rhca1 45 ELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 124 (257)
T ss_dssp HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHH
Confidence 4456788999999999999999999999999999999999999998888877776 899999988888888888888775
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|+.
T Consensus 125 ~~~----------------------------------------------------------------------------- 127 (257)
T d2rhca1 125 GGM----------------------------------------------------------------------------- 127 (257)
T ss_dssp TSH-----------------------------------------------------------------------------
T ss_pred HHH-----------------------------------------------------------------------------
Confidence 421
Q ss_pred ccHHHHHHHHhhcc-cCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchh
Q psy2266 162 FALVTVCHILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYS 240 (313)
Q Consensus 162 ~g~~~~~~~~~p~l-~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 240 (313)
. +++|+||+++|..+.. +.....+|+
T Consensus 128 -------------~~~~~g~Ii~i~S~~~~~----------------------------------------~~~~~~~Y~ 154 (257)
T d2rhca1 128 -------------LERGTGRIVNIASTGGKQ----------------------------------------GVVHAAPYS 154 (257)
T ss_dssp -------------HHHTEEEEEEECCGGGTS----------------------------------------CCTTCHHHH
T ss_pred -------------HhcCCccccccccccccc----------------------------------------ccccchhHH
Confidence 0 1236777777777654 223445699
Q ss_pred hhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc--------CCCCcchhhhhhhhhhcccCCccc
Q psy2266 241 VSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK--------GVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 241 ~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~--------~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
+||+|+..|+|.|+.|++++ |||||+|+||+|+|||.+.. ....++..+......|++|+++..
T Consensus 155 asKaal~~ltk~lA~el~~~----gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pe 226 (257)
T d2rhca1 155 ASKHGVVGFTKALGLELART----GITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPS 226 (257)
T ss_dssp HHHHHHHHHHHHHHHHTTTS----EEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHhhhh----CcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHH
Confidence 99999999999999998876 99999999999999997542 223344556667788999998753
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.97 E-value=3.1e-31 Score=240.67 Aligned_cols=168 Identities=23% Similarity=0.319 Sum_probs=127.3
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
+.|.++.+++||++|+++++++++.+.++||+||+||||||+....++++++ ++|++++++|+.++++++|+++|.|++
T Consensus 52 ~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~ 131 (260)
T d1x1ta1 52 QHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKK 131 (260)
T ss_dssp HHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhh
Confidence 4577899999999999999999999999999999999999998888887776 888888888888888888877777754
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 132 -------------------------------------------------------------------------------- 131 (260)
T d1x1ta1 132 -------------------------------------------------------------------------------- 131 (260)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+++|+||++||.++.. +.++..+|++||+
T Consensus 132 -----------~~~G~Iv~isS~~~~~----------------------------------------~~~~~~~Y~asKa 160 (260)
T d1x1ta1 132 -----------QGFGRIINIASAHGLV----------------------------------------ASANKSAYVAAKH 160 (260)
T ss_dssp -----------HTCEEEEEECCGGGTS----------------------------------------CCTTCHHHHHHHH
T ss_pred -----------cCCceEeeccccccee----------------------------------------ccCCcchhhhhhh
Confidence 1236677777776654 1233456999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCC-------C--cchhhhhhhhhhcccCCccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVL-------T--PEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~-------~--~~~~~~~~~~~~l~r~~~~~ 308 (313)
|+.+|+|.++.+++++ |||||+|+||+|+|||.+..... . ....+......|++|+|+..
T Consensus 161 al~~lt~~lA~el~~~----gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe 229 (260)
T d1x1ta1 161 GVVGFTKVTALETAGQ----GITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE 229 (260)
T ss_dssp HHHHHHHHHHHHHTTT----TEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHH
T ss_pred hHHHhHHHHHHHhchh----CcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHH
Confidence 9999999999999876 99999999999999997653211 1 11113345667999988753
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.97 E-value=5.3e-31 Score=239.82 Aligned_cols=171 Identities=18% Similarity=0.173 Sum_probs=139.0
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
++++.|.++..++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|+.+++.++|++.|.
T Consensus 51 ~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 130 (261)
T d1geea_ 51 EIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKY 130 (261)
T ss_dssp HHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhh
Confidence 4566788999999999999999999999999999999999999998877777777 999999988888888888888887
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++.
T Consensus 131 m~~~---------------------------------------------------------------------------- 134 (261)
T d1geea_ 131 FVEN---------------------------------------------------------------------------- 134 (261)
T ss_dssp HHHT----------------------------------------------------------------------------
T ss_pred hccc----------------------------------------------------------------------------
Confidence 7441
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
+.+++|+++||.++.. +.....+|++
T Consensus 135 --------------~~g~~Iv~isS~~~~~----------------------------------------~~~~~~~Y~a 160 (261)
T d1geea_ 135 --------------DIKGTVINMSSVHEKI----------------------------------------PWPLFVHYAA 160 (261)
T ss_dssp --------------TCCCEEEEECCGGGTS----------------------------------------CCTTCHHHHH
T ss_pred --------------cccccccccccchhcc----------------------------------------cCcccccccc
Confidence 0113466677766654 1223456999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
||+|+..|+|.++.|++++ |||||+|+||+|+|||..... ..++..+......|++|+++..
T Consensus 161 sKaal~~lt~~lA~e~~~~----gIrVN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~~pl~R~~~pe 222 (261)
T d1geea_ 161 SKGGMKLMTETLALEYAPK----GIRVNNIGPGAINTPINAEKF-ADPEQRADVESMIPMGYIGEPE 222 (261)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TCEEEEEEECSBCSGGGHHHH-HSHHHHHHHHTTCTTSSCBCHH
T ss_pred CCccchhhHHHHHHHhhhh----CcEEEEEeeCcCcCHhHhhhc-CCHHHHHHHHhcCCCCCCCCHH
Confidence 9999999999999999887 999999999999999976531 2455556667788999998753
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.97 E-value=3.5e-31 Score=240.20 Aligned_cols=165 Identities=25% Similarity=0.319 Sum_probs=135.0
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
.+++++.++.+++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|+.+++.++|++.|.
T Consensus 45 ~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~ 124 (254)
T d1hdca_ 45 TARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPA 124 (254)
T ss_dssp HHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHH
Confidence 4567788899999999999999999999999999999999999998877777776 899999988888888888888877
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++
T Consensus 125 m~~----------------------------------------------------------------------------- 127 (254)
T d1hdca_ 125 MKD----------------------------------------------------------------------------- 127 (254)
T ss_dssp HHH-----------------------------------------------------------------------------
T ss_pred Hhh-----------------------------------------------------------------------------
Confidence 754
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
+++|+||++||.++... ..+..+|++
T Consensus 128 --------------~~~G~II~isS~~~~~~----------------------------------------~~~~~~Y~a 153 (254)
T d1hdca_ 128 --------------AGGGSIVNISSAAGLMG----------------------------------------LALTSSYGA 153 (254)
T ss_dssp --------------HTCEEEEEECCGGGTSC----------------------------------------CTTCHHHHH
T ss_pred --------------cCCCeecccccchhccc----------------------------------------ccchhhHHH
Confidence 22366677777666541 233456999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCC
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTN 305 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~ 305 (313)
||+|+..|+|.|+.|++++ |||||+|+||+|+|+|.... .++..+......|++|+|
T Consensus 154 sKaal~~lt~~lA~e~a~~----gIrVN~I~PG~v~T~~~~~~---~~~~~~~~~~~~pl~R~g 210 (254)
T d1hdca_ 154 SKWGVRGLSKLAAVELGTD----RIRVNSVHPGMTYTPMTAET---GIRQGEGNYPNTPMGRVG 210 (254)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHHH---TCCCSTTSCTTSTTSSCB
T ss_pred HHHHHHHHHHHHHHHhCCC----ceEEEEeeeCcccCccchhc---CHHHHHHHHhCCCCCCCC
Confidence 9999999999999999887 99999999999999998764 223334445667888887
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.6e-30 Score=235.02 Aligned_cols=205 Identities=37% Similarity=0.562 Sum_probs=149.7
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
++++.+.++.+++||++|.++++++++.+.++||+||+||||||+.......+.+ ++|+.++++|+++++.++|+++|.
T Consensus 47 ~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~ 126 (275)
T d1wmaa1 47 QLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPL 126 (275)
T ss_dssp HHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred HHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455678899999999999999999999999999999999999998777665555 788888888887777777777777
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|+++|+||+++|..+.... ..
T Consensus 127 m~~~g~ivnisS~~~~~~~-----------------------------------------------------------~~ 147 (275)
T d1wmaa1 127 IKPQGRVVNVSSIMSVRAL-----------------------------------------------------------KS 147 (275)
T ss_dssp EEEEEEEEEECCHHHHHHH-----------------------------------------------------------HT
T ss_pred HHhcCCcccccccceeccc-----------------------------------------------------------cc
Confidence 7666666666664432200 00
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
.+++...+. ......+..........+.....+-....+++..+|++
T Consensus 148 ~~~y~~~k~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~ 194 (275)
T d1wmaa1 148 CSPELQQKF---------------------------------RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGV 194 (275)
T ss_dssp SCHHHHHHH---------------------------------HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHH
T ss_pred cchhhhhhh---------------------------------cccccchhhhccccccchhcccccccccCCCchHHHHH
Confidence 111111111 11112223333344444555555555556677778999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhh
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIY 299 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~ 299 (313)
||+|+..|++.++++|+++.+..||+||+|+||+|+|+|.+.....+|++.+....++
T Consensus 195 sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~~~~pee~A~~~~~~ 252 (275)
T d1wmaa1 195 TKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEGAETPVYL 252 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTCSBCHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCcccCCHHHHHHHHHHH
Confidence 9999999999999999987777899999999999999999887777888887766554
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.97 E-value=8.8e-31 Score=237.88 Aligned_cols=167 Identities=20% Similarity=0.218 Sum_probs=131.7
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
.+.++..++||++|+++++++++.+.++||+||+||||||+... .++++++ ++|++++++|++++++++|++.|.|++
T Consensus 53 ~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~ 132 (258)
T d1iy8a_ 53 PDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMRE 132 (258)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhh
Confidence 35678999999999999999999999999999999999998754 4677766 889999988888888888887777654
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 133 -------------------------------------------------------------------------------- 132 (258)
T d1iy8a_ 133 -------------------------------------------------------------------------------- 132 (258)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+++|+||++||..+... .....+|++||+
T Consensus 133 -----------~~~G~Ii~isS~~~~~~----------------------------------------~~~~~~Y~asKa 161 (258)
T d1iy8a_ 133 -----------QGSGMVVNTASVGGIRG----------------------------------------IGNQSGYAAAKH 161 (258)
T ss_dssp -----------HTCCEEEEECCGGGTSB----------------------------------------CSSBHHHHHHHH
T ss_pred -----------hcCCCCcccccHhhccC----------------------------------------CCCchHHHHHHH
Confidence 22366777777666541 233456999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc----CCCC-cchhhhhhhhhhcccCCccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK----GVLT-PEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~----~~~~-~~~~~~~~~~~~l~r~~~~~ 308 (313)
|+.+|+|.|+.|++++ |||||+|+||+|+|||.+.. .... .+..+......|++|+++..
T Consensus 162 al~~lt~~lA~el~~~----gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~ 226 (258)
T d1iy8a_ 162 GVVGLTRNSAVEYGRY----GIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAP 226 (258)
T ss_dssp HHHHHHHHHHHHHGGG----TCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHH
T ss_pred HHHHHHHHHHHHhCcc----CceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHH
Confidence 9999999999999877 99999999999999997653 1112 22234455667999988753
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.97 E-value=1.1e-30 Score=234.41 Aligned_cols=163 Identities=20% Similarity=0.272 Sum_probs=128.7
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
..++..++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|++
T Consensus 44 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~-- 121 (237)
T d1uzma1 44 PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQR-- 121 (237)
T ss_dssp CTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--
T ss_pred hcCceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccc--
Confidence 34567899999999999999999999999999999999998877777776 899999988888888888888777754
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 122 -------------------------------------------------------------------------------- 121 (237)
T d1uzma1 122 -------------------------------------------------------------------------------- 121 (237)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
+++|+||++||.++... ..+..+|++||+|+
T Consensus 122 ---------~~~g~Iv~isS~~~~~~----------------------------------------~~~~~~Y~asKaal 152 (237)
T d1uzma1 122 ---------NKFGRMIFIGSVSGLWG----------------------------------------IGNQANYAASKAGV 152 (237)
T ss_dssp ---------TTCEEEEEECCCCC---------------------------------------------CCHHHHHHHHHH
T ss_pred ---------cCCCceEEEcchhhccC----------------------------------------CcccHHHHHHHHHH
Confidence 22356777777776541 23345699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
..|+|.+++|++++ |||||+|+||+|+|+|.+.. ++...+......|++|+++..
T Consensus 153 ~~lt~~lA~e~~~~----gIrVN~I~PG~v~T~~~~~~---~~~~~~~~~~~~pl~R~~~pe 207 (237)
T d1uzma1 153 IGMARSIARELSKA----NVTANVVAPGYIDTDMTRAL---DERIQQGALQFIPAKRVGTPA 207 (237)
T ss_dssp HHHHHHHHHHHGGG----TEEEEEEEECSBCCHHHHHS---CHHHHHHHGGGCTTCSCBCHH
T ss_pred HHHHHHHHhhhhcC----CceeeeeeeCcCCChhhhcc---CHHHHHHHHhcCCCCCCcCHH
Confidence 99999999999887 99999999999999998763 445555667778999988753
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.97 E-value=1.3e-30 Score=235.05 Aligned_cols=162 Identities=22% Similarity=0.299 Sum_probs=131.4
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
..++++.++.+++||++|+++++++++.+.++||+||+||||||+....++++++ ++|++++++|++++++++|++.|.
T Consensus 46 ~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 125 (244)
T d1nffa_ 46 MAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKP 125 (244)
T ss_dssp HHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhH
Confidence 3456677899999999999999999999999999999999999998888888877 999999999998888888888887
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++
T Consensus 126 m~~----------------------------------------------------------------------------- 128 (244)
T d1nffa_ 126 MKE----------------------------------------------------------------------------- 128 (244)
T ss_dssp HHH-----------------------------------------------------------------------------
T ss_pred HHh-----------------------------------------------------------------------------
Confidence 754
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
+++|+||++||..+.. +.....+|++
T Consensus 129 --------------~~~G~Ii~isS~~~~~----------------------------------------~~~~~~~Y~a 154 (244)
T d1nffa_ 129 --------------AGRGSIINISSIEGLA----------------------------------------GTVACHGYTA 154 (244)
T ss_dssp --------------HTCEEEEEECCGGGTS----------------------------------------CCTTBHHHHH
T ss_pred --------------cCcceEEecccccccc----------------------------------------ccccccchhh
Confidence 1236666777766654 1233456999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
||+|+..|+|.++.|++++ |||||+|+||+|+|||.+.... . ....|++|+++.
T Consensus 155 sKaal~~ltk~lA~el~~~----gIrVN~I~PG~i~T~~~~~~~~----~----~~~~pl~R~~~p 208 (244)
T d1nffa_ 155 TKFAVRGLTKSTALELGPS----GIRVNSIHPGLVKTPMTDWVPE----D----IFQTALGRAAEP 208 (244)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCSGGGTTSCT----T----CSCCSSSSCBCH
T ss_pred HHHHHHHHHHHHHHHhccc----CEEEEEEeeCCccChhHhhhhH----H----HHhccccCCCCH
Confidence 9999999999999999887 9999999999999999765321 1 123567776654
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.97 E-value=9.9e-31 Score=236.84 Aligned_cols=172 Identities=19% Similarity=0.195 Sum_probs=136.5
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
++++.|+++.+++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|++++++++|+++|.
T Consensus 44 ~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 123 (255)
T d1gega_ 44 EINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEA 123 (255)
T ss_dssp HHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcch
Confidence 4566788999999999999999999999999999999999999998877887777 899999988888888888888876
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++.
T Consensus 124 m~~~---------------------------------------------------------------------------- 127 (255)
T d1gega_ 124 FKKE---------------------------------------------------------------------------- 127 (255)
T ss_dssp HHHH----------------------------------------------------------------------------
T ss_pred hhhh----------------------------------------------------------------------------
Confidence 5431
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
.++++|+++||.++.. +.....+|++
T Consensus 128 --------------~~~g~Iv~isS~~~~~----------------------------------------~~~~~~~Y~a 153 (255)
T d1gega_ 128 --------------GHGGKIINACSQAGHV----------------------------------------GNPELAVYSS 153 (255)
T ss_dssp --------------TSCEEEEEECCGGGTS----------------------------------------CCTTBHHHHH
T ss_pred --------------ccccccccccchhhcc----------------------------------------cCcccccchh
Confidence 1125566666666654 1233456999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccC--------CCCcchhhhhhhhhhcccCCccc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG--------VLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~--------~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
||+|+.+|+|.++.|++++ |||||+|+||+|+|||..... .......+......|++|+++..
T Consensus 154 sKaal~~ltk~lA~el~~~----gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pe 224 (255)
T d1gega_ 154 SKFAVRGLTQTAARDLAPL----GITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPE 224 (255)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHH
T ss_pred CHHHHHhhHHHHHHHhhhh----CcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHH
Confidence 9999999999999999887 999999999999999865421 12223334456678999988753
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.97 E-value=1.7e-30 Score=234.75 Aligned_cols=162 Identities=23% Similarity=0.235 Sum_probs=129.3
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
..+++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|++++++++|++.|.|+++
T Consensus 50 ~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~---- 125 (248)
T d2d1ya1 50 GAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV---- 125 (248)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT----
T ss_pred CeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc----
Confidence 45689999999999999999999999999999999999888888877 9999999888888888888888877651
Q ss_pred EEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHH
Q psy2266 90 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCH 169 (313)
Q Consensus 90 ~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 169 (313)
T Consensus 126 -------------------------------------------------------------------------------- 125 (248)
T d2d1ya1 126 -------------------------------------------------------------------------------- 125 (248)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHH
Q psy2266 170 ILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKL 249 (313)
Q Consensus 170 ~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l 249 (313)
++|+||++||..+... .....+|++||+|+..|
T Consensus 126 -------~~G~Ii~isS~~~~~~----------------------------------------~~~~~~Y~asKaal~~l 158 (248)
T d2d1ya1 126 -------GGGAIVNVASVQGLFA----------------------------------------EQENAAYNASKGGLVNL 158 (248)
T ss_dssp -------TCEEEEEECCGGGTSB----------------------------------------CTTBHHHHHHHHHHHHH
T ss_pred -------cccccccccccccccc----------------------------------------ccccchhHHHHHHHHHH
Confidence 2356666666666541 23345699999999999
Q ss_pred HHHHHhhhccCCCCCCeEEEeecccccccccccccCC---CCcchhhhhhhhhhcccCCcc
Q psy2266 250 SFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGV---LTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 250 ~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~l~r~~~~ 307 (313)
+|.+++|++++ |||||+|+||+|+||+.+.... .+.+..+......|++|+++.
T Consensus 159 tk~lA~el~~~----gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p 215 (248)
T d2d1ya1 159 TRSLALDLAPL----RIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKP 215 (248)
T ss_dssp HHHHHHHHGGG----TEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCH
T ss_pred HHHHHHHhhhh----CcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCH
Confidence 99999999987 9999999999999998765311 222333455667899998875
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.97 E-value=2.6e-30 Score=232.40 Aligned_cols=163 Identities=23% Similarity=0.251 Sum_probs=131.1
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
++++.|.++.+++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|++|+++++|++.|.
T Consensus 51 ~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 130 (240)
T d2bd0a1 51 ECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL 130 (240)
T ss_dssp HHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHH
Confidence 3456788899999999999999999999999999999999999999888888777 899999988888888888888877
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++
T Consensus 131 m~~----------------------------------------------------------------------------- 133 (240)
T d2bd0a1 131 MER----------------------------------------------------------------------------- 133 (240)
T ss_dssp HHH-----------------------------------------------------------------------------
T ss_pred HHh-----------------------------------------------------------------------------
Confidence 754
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
+++|+||++||.++.. +.++..+|++
T Consensus 134 --------------~~~G~Ii~isS~~~~~----------------------------------------~~~~~~~Y~a 159 (240)
T d2bd0a1 134 --------------QHSGHIFFITSVAATK----------------------------------------AFRHSSIYCM 159 (240)
T ss_dssp --------------HTCEEEEEECCGGGTS----------------------------------------CCTTCHHHHH
T ss_pred --------------cCCCceEEEechhhcC----------------------------------------CCCCChHHHH
Confidence 1236666777666654 1233456999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccC------CCCcchhhhhhhhhh
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG------VLTPEQGKIRQKIYL 300 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~------~~~~~~~~~~~~~~~ 300 (313)
||+|+.+|+|.++.|++++ |||||+|+||+|+|||.+... ...|++.+....++.
T Consensus 160 sK~al~~lt~~la~el~~~----gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~PedvA~~v~~l~ 220 (240)
T d2bd0a1 160 SKFGQRGLVETMRLYARKC----NVRITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQAY 220 (240)
T ss_dssp HHHHHHHHHHHHHHHHTTT----TEEEEEEEECCBCSTTTCCCCSTTGGGSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcC----CeEEEEeeeCcccCchhhhcCHhhHhcCCCHHHHHHHHHHHH
Confidence 9999999999999998876 999999999999999987642 234555555544443
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.97 E-value=1.6e-30 Score=236.27 Aligned_cols=168 Identities=21% Similarity=0.228 Sum_probs=110.3
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHc-CCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQH-GGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~-g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
+++.+.++.++.||++++++++++++.+.++| |+||+||||||+....++.+++ ++|++++++|+.+++.++|++.|.
T Consensus 52 ~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 131 (259)
T d1xq1a_ 52 WQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPL 131 (259)
T ss_dssp HHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhc
Confidence 34567789999999999999999999999998 7899999999999888777777 999999999998888888888887
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++
T Consensus 132 m~~----------------------------------------------------------------------------- 134 (259)
T d1xq1a_ 132 LKA----------------------------------------------------------------------------- 134 (259)
T ss_dssp HHH-----------------------------------------------------------------------------
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 754
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
+++|+||++||..+... .....+|++
T Consensus 135 --------------~~~G~Iv~isS~~~~~~----------------------------------------~~~~~~Y~a 160 (259)
T d1xq1a_ 135 --------------SGCGNIIFMSSIAGVVS----------------------------------------ASVGSIYSA 160 (259)
T ss_dssp --------------HSSCEEEEEC--------------------------------------------------CCHHHH
T ss_pred --------------ccccccccccccccccc----------------------------------------ccccccccc
Confidence 22366666666666541 223456999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
||+|+..|+|.++.|++++ |||||+|+||+|+|||.+.. ..++..+......|++|+|+..
T Consensus 161 sKaal~~lt~~lA~e~~~~----gIrVN~V~PG~i~T~~~~~~--~~~~~~~~~~~~~pl~R~~~pe 221 (259)
T d1xq1a_ 161 TKGALNQLARNLACEWASD----GIRANAVAPAVIATPLAEAV--YDDEFKKVVISRKPLGRFGEPE 221 (259)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TCEEEEEECCSCC---------------------------CCGG
T ss_pred cccchhhhhHHHHHHhccc----CeEEEEeccCcccCHHhhhh--chHHHHHHHHhCCCCCCCcCHH
Confidence 9999999999999999987 99999999999999998764 2334445556778999988764
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.96 E-value=5e-30 Score=231.88 Aligned_cols=168 Identities=23% Similarity=0.253 Sum_probs=134.6
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.++++.+++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|+.++++++|+++|.|++.
T Consensus 52 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~ 131 (251)
T d1zk4a1 52 TPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK 131 (251)
T ss_dssp CTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred CCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhc
Confidence 356889999999999999999999999999999999999999888888887 9999999999999999888888888652
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 132 -------------------------------------------------------------------------------- 131 (251)
T d1zk4a1 132 -------------------------------------------------------------------------------- 131 (251)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+.+|+||++||.++.. +.....+|++||+|
T Consensus 132 ----------~~gg~Ii~isS~~~~~----------------------------------------~~~~~~~Y~asKaa 161 (251)
T d1zk4a1 132 ----------GLGASIINMSSIEGFV----------------------------------------GDPSLGAYNASKGA 161 (251)
T ss_dssp ----------SSCEEEEEECCGGGTS----------------------------------------CCTTCHHHHHHHHH
T ss_pred ----------CCCCceEeeeccceec----------------------------------------cCCCchhHHHHHHH
Confidence 1124566666666654 12234569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
+..|+|.++.+++ ++++|||||+|+||+|+|||.+.. ..++.........|++|+++..
T Consensus 162 l~~lt~~lA~e~~--l~~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~~~~pl~R~~~pe 220 (251)
T d1zk4a1 162 VRIMSKSAALDCA--LKDYDVRVNTVHPGYIKTPLVDDL--PGAEEAMSQRTKTPMGHIGEPN 220 (251)
T ss_dssp HHHHHHHHHHHHH--HTTCSEEEEEEEECCBCCHHHHTS--TTHHHHHTSTTTCTTSSCBCHH
T ss_pred HhcchHHHHHHHh--cCCCcEEEEEEeCCCCCChhHHhc--CCHHHHHHHHhCCCCCCCcCHH
Confidence 9999999998843 124599999999999999998774 3344444455678999988753
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.96 E-value=1.5e-30 Score=235.89 Aligned_cols=172 Identities=19% Similarity=0.210 Sum_probs=136.9
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
.++++|.++.+++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|++++++++|+++|.
T Consensus 45 ~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 124 (256)
T d1k2wa_ 45 TAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARA 124 (256)
T ss_dssp HHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccch
Confidence 4456788999999999999999999999999999999999999998877777776 999999988888888888887775
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|.+.
T Consensus 125 ~~~~---------------------------------------------------------------------------- 128 (256)
T d1k2wa_ 125 MIAG---------------------------------------------------------------------------- 128 (256)
T ss_dssp HHHH----------------------------------------------------------------------------
T ss_pred hHHh----------------------------------------------------------------------------
Confidence 4220
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
.++|+||++||..+.. +.....+|++
T Consensus 129 --------------~~~g~Iv~isS~~~~~----------------------------------------~~~~~~~Y~a 154 (256)
T d1k2wa_ 129 --------------GRGGKIINMASQAGRR----------------------------------------GEALVGVYCA 154 (256)
T ss_dssp --------------TSCEEEEEECCGGGTS----------------------------------------CCTTCHHHHH
T ss_pred --------------ccCCccccccchhhcc----------------------------------------ccccccchhh
Confidence 1235666666666654 1233456999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc--------CCCCcchhhhhhhhhhcccCCccc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK--------GVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~--------~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
||+|+.+|+|.++.|++++ |||||+|+||+|+|||.+.. ....++..+......|++|+++..
T Consensus 155 sKaal~~lt~~lA~el~~~----gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~ 225 (256)
T d1k2wa_ 155 TKAAVISLTQSAGLNLIRH----GINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAE 225 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHH
T ss_pred hhhHHHHHHHHHHHHhccc----CeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHH
Confidence 9999999999999999887 99999999999999986542 122334445556778999988753
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.96 E-value=2e-30 Score=235.51 Aligned_cols=171 Identities=19% Similarity=0.212 Sum_probs=134.7
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
++++.|.++.+++||++|+++++++++.+.++||+||+||||||+... .++++++ ++|++++++|+.++++++|++.|
T Consensus 48 ~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~ 127 (260)
T d1zema1 48 SVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSR 127 (260)
T ss_dssp HHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHh
Confidence 456678899999999999999999999999999999999999998754 4677776 89999998888888888888888
Q ss_pred cccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcc
Q psy2266 81 LLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATN 160 (313)
Q Consensus 81 ~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N 160 (313)
.|++
T Consensus 128 ~m~~---------------------------------------------------------------------------- 131 (260)
T d1zema1 128 QMIT---------------------------------------------------------------------------- 131 (260)
T ss_dssp HHHH----------------------------------------------------------------------------
T ss_pred hhhh----------------------------------------------------------------------------
Confidence 7744
Q ss_pred cccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchh
Q psy2266 161 FFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYS 240 (313)
Q Consensus 161 ~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 240 (313)
+++|+||++||.++... .....+|+
T Consensus 132 ---------------~~~G~II~isS~~~~~~----------------------------------------~~~~~~Y~ 156 (260)
T d1zema1 132 ---------------QNYGRIVNTASMAGVKG----------------------------------------PPNMAAYG 156 (260)
T ss_dssp ---------------HTCEEEEEECCHHHHSC----------------------------------------CTTBHHHH
T ss_pred ---------------hcCCCCCeeechhhccC----------------------------------------CcchHHHH
Confidence 22366666666666541 22345699
Q ss_pred hhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc------------CCCCcc-hhhhhhhhhhcccCCcc
Q psy2266 241 VSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK------------GVLTPE-QGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 241 ~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~------------~~~~~~-~~~~~~~~~~l~r~~~~ 307 (313)
+||+|+.+|+|.++.|++++ |||||+|+||+|+|+|.... ....++ ..+......|++|+|+.
T Consensus 157 asKaal~~ltk~lA~el~~~----gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~p 232 (260)
T d1zema1 157 TSKGAIIALTETAALDLAPY----NIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDI 232 (260)
T ss_dssp HHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCG
T ss_pred HHHHHHHHHHHHHHHHhhhh----CCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCH
Confidence 99999999999999999877 99999999999999985321 112222 23445667899999875
Q ss_pred c
Q psy2266 308 Q 308 (313)
Q Consensus 308 ~ 308 (313)
.
T Consensus 233 e 233 (260)
T d1zema1 233 N 233 (260)
T ss_dssp G
T ss_pred H
Confidence 4
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.96 E-value=3.3e-30 Score=234.06 Aligned_cols=170 Identities=24% Similarity=0.245 Sum_probs=134.6
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcC-CCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHG-GLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g-~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
+++.+.++..++||++|+++++++++.+.+++| +||+||||||+....++.+++ ++|++++++|+.+++.++|++.|.
T Consensus 52 ~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~ 131 (259)
T d2ae2a_ 52 WRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPF 131 (259)
T ss_dssp HHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccch
Confidence 455678899999999999999999999999987 899999999998877777776 889998888888888888887777
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++
T Consensus 132 m~~----------------------------------------------------------------------------- 134 (259)
T d2ae2a_ 132 LKA----------------------------------------------------------------------------- 134 (259)
T ss_dssp HHH-----------------------------------------------------------------------------
T ss_pred hhh-----------------------------------------------------------------------------
Confidence 654
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
+++|+||++||..+... .....+|++
T Consensus 135 --------------~~~G~Ii~isS~~~~~~----------------------------------------~~~~~~Y~a 160 (259)
T d2ae2a_ 135 --------------SERGNVVFISSVSGALA----------------------------------------VPYEAVYGA 160 (259)
T ss_dssp --------------TSSEEEEEECCGGGTSC----------------------------------------CTTCHHHHH
T ss_pred --------------hcccccccccccccccc----------------------------------------cccccchHH
Confidence 12366666666666541 223456999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCC--cchhhhhhhhhhcccCCccc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLT--PEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~l~r~~~~~ 308 (313)
||+|+..|+|.++.|++++ |||||+|+||+|+|||.+...... .+..+......|++|+|+..
T Consensus 161 sKaal~~lt~~lA~el~~~----gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pe 225 (259)
T d2ae2a_ 161 TKGAMDQLTRCLAFEWAKD----NIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPK 225 (259)
T ss_dssp HHHHHHHHHHHHHHHTGGG----TEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHhCcC----ceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHH
Confidence 9999999999999999877 999999999999999977642221 12234445678999998753
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.96 E-value=1.3e-29 Score=227.98 Aligned_cols=160 Identities=23% Similarity=0.237 Sum_probs=130.3
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
++.+++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|+.++++++|++.|.|++.
T Consensus 50 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--- 126 (242)
T d1ulsa_ 50 GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK--- 126 (242)
T ss_dssp TCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT---
T ss_pred CCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccc---
Confidence 357789999999999999999999999999999999999888887777 9999999999999999999888888652
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 127 -------------------------------------------------------------------------------- 126 (242)
T d1ulsa_ 127 -------------------------------------------------------------------------------- 126 (242)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
+++.|+++||. +.. +..+..+|++||+|+..
T Consensus 127 --------~~~~i~~~ss~-~~~----------------------------------------~~~~~~~Y~asKaal~~ 157 (242)
T d1ulsa_ 127 --------NPGSIVLTASR-VYL----------------------------------------GNLGQANYAASMAGVVG 157 (242)
T ss_dssp --------CCEEEEEECCG-GGG----------------------------------------CCTTCHHHHHHHHHHHH
T ss_pred --------ccceeeeeccc-ccc----------------------------------------CCCCCcchHHHHHHHHH
Confidence 11333443332 221 12234569999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
|+|.++.|++++ |||||+|+||+|+|+|.+.. +++..+......|++|+++..
T Consensus 158 ltk~lA~ela~~----gIrVN~I~PG~v~T~~~~~~---~~~~~~~~~~~~pl~R~~~pe 210 (242)
T d1ulsa_ 158 LTRTLALELGRW----GIRVNTLAPGFIETRMTAKV---PEKVREKAIAATPLGRAGKPL 210 (242)
T ss_dssp HHHHHHHHHGGG----TEEEEEEEECSBCCTTTSSS---CHHHHHHHHHTCTTCSCBCHH
T ss_pred HHHHHHHHHhhh----CcEEEEEeeCcccChhhhcC---CHHHHHHHHhcCCCCCCCCHH
Confidence 999999999987 99999999999999998763 455556667788999988753
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.2e-30 Score=233.24 Aligned_cols=165 Identities=23% Similarity=0.261 Sum_probs=128.1
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
..++.+++||++|+++++++++.+.++||+||+||||||+.... ++++++ ++|++++++|++++++++|++.|.|+++
T Consensus 50 ~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~ 129 (250)
T d1ydea1 50 LPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS 129 (250)
T ss_dssp CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC
Confidence 34688999999999999999999999999999999999987543 566666 8888888888888888777777766441
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 130 -------------------------------------------------------------------------------- 129 (250)
T d1ydea1 130 -------------------------------------------------------------------------------- 129 (250)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+|+||++||..+... .....+|++||+|
T Consensus 130 ------------~G~Ii~isS~~~~~~----------------------------------------~~~~~~Y~asKaa 157 (250)
T d1ydea1 130 ------------QGNVINISSLVGAIG----------------------------------------QAQAVPYVATKGA 157 (250)
T ss_dssp ------------TCEEEEECCHHHHHC----------------------------------------CTTCHHHHHHHHH
T ss_pred ------------CCCCccccccccccc----------------------------------------ccCcchhHHHHhh
Confidence 255666666665441 2233569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCc---chhhhhhhhhhcccCCccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTP---EQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~~~l~r~~~~~ 308 (313)
+..|+|.+++|++++ |||||+|+||+|+|||.+......+ +..+......|++|+++..
T Consensus 158 l~~lt~~lA~e~a~~----gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~ 219 (250)
T d1ydea1 158 VTAMTKALALDESPY----GVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPA 219 (250)
T ss_dssp HHHHHHHHHHHHGGG----TCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHH
T ss_pred HHHHHHHHHHHhccc----CeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHH
Confidence 999999999999887 9999999999999999765432222 2334445567999998753
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.96 E-value=9.8e-30 Score=230.28 Aligned_cols=171 Identities=20% Similarity=0.176 Sum_probs=130.6
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
..++.+.++..++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|+.++++++|++.|.
T Consensus 46 ~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 125 (253)
T d1hxha_ 46 LAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAA 125 (253)
T ss_dssp HHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3456688899999999999999999999999999999999999998877777776 889988888888888888887777
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++.
T Consensus 126 m~~~---------------------------------------------------------------------------- 129 (253)
T d1hxha_ 126 MKET---------------------------------------------------------------------------- 129 (253)
T ss_dssp HTTT----------------------------------------------------------------------------
T ss_pred HHhc----------------------------------------------------------------------------
Confidence 7541
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
+|+||++||.++.. +.....+|++
T Consensus 130 ----------------~G~Iv~isS~~~~~----------------------------------------~~~~~~~Y~a 153 (253)
T d1hxha_ 130 ----------------GGSIINMASVSSWL----------------------------------------PIEQYAGYSA 153 (253)
T ss_dssp ----------------CEEEEEECCGGGTS----------------------------------------CCTTBHHHHH
T ss_pred ----------------CCceecccchhhhc----------------------------------------Cccccccccc
Confidence 25555666655543 1223456999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCC--CCcchhhhhhhhhhcccCCcc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGV--LTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~l~r~~~~ 307 (313)
||+|+..|+|.++.|++++ .+|||||+|+||+|+|+|.+.... ...+.........|++|+++.
T Consensus 154 sKaal~~lt~~lA~e~~~~--g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~p 219 (253)
T d1hxha_ 154 SKAAVSALTRAAALSCRKQ--GYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMP 219 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHH--TCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECH
T ss_pred hhHHHHHHHHHHHHHHhhc--CCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCH
Confidence 9999999999999999875 346999999999999999765321 122222333344566666553
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.96 E-value=2.1e-29 Score=227.68 Aligned_cols=160 Identities=14% Similarity=0.181 Sum_probs=129.2
Q ss_pred EEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEE
Q psy2266 14 HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNV 91 (313)
Q Consensus 14 ~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~i 91 (313)
.+||++++++++++++.+.++||+||+||||||+... .++++++ ++|++.+++|+.++++++|++.|.|++
T Consensus 48 ~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~------- 120 (252)
T d1zmta1 48 PQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKK------- 120 (252)
T ss_dssp TTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-------
T ss_pred EEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcc-------
Confidence 4689999999999999999999999999999998754 4777766 889999988888888888888877754
Q ss_pred ecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHH
Q psy2266 92 ASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHIL 171 (313)
Q Consensus 92 sS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 171 (313)
T Consensus 121 -------------------------------------------------------------------------------- 120 (252)
T d1zmta1 121 -------------------------------------------------------------------------------- 120 (252)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHH
Q psy2266 172 FPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSF 251 (313)
Q Consensus 172 ~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~ 251 (313)
+++|+||++||..+.. +.....+|++||+|+.+|+|
T Consensus 121 ----~~~G~IV~isS~~~~~----------------------------------------~~~~~~~Y~asKaal~~lt~ 156 (252)
T d1zmta1 121 ----RKSGHIIFITSATPFG----------------------------------------PWKELSTYTSARAGACTLAN 156 (252)
T ss_dssp ----HTCCEEEEECCSTTTS----------------------------------------CCTTCHHHHHHHHHHHHHHH
T ss_pred ----cccceeeccccccccc----------------------------------------ccccccccccccccHHHHHH
Confidence 2236677777776654 12233569999999999999
Q ss_pred HHHhhhccCCCCCCeEEEeecccccccccccccC-----CCCcchhhhhhhhhhcccCCccc
Q psy2266 252 IQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG-----VLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 252 ~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~-----~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
.+++|++++ |||||+|+||+|+|++..... ...++..+......|++|+|+..
T Consensus 157 ~lA~ela~~----gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pe 214 (252)
T d1zmta1 157 ALSKELGEY----NIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQK 214 (252)
T ss_dssp HHHHHHGGG----TCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHH
T ss_pred HHHHHhccc----CcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHH
Confidence 999999877 999999999999999987642 23455556677888999998753
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.95 E-value=8.6e-29 Score=224.46 Aligned_cols=172 Identities=21% Similarity=0.237 Sum_probs=138.5
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
.++.|.++.+++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|+.+++.++|++.|.|
T Consensus 54 ~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m 133 (260)
T d1h5qa_ 54 GKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLW 133 (260)
T ss_dssp HHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccc
Confidence 345688999999999999999999999999999999999999998888888777 9999999999999999999999988
Q ss_pred cC---CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhc
Q psy2266 83 RP---HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLAT 159 (313)
Q Consensus 83 ~~---~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~ 159 (313)
.+ +++|++++|........
T Consensus 134 ~~~~~~g~i~~~~s~~~~~~~~---------------------------------------------------------- 155 (260)
T d1h5qa_ 134 LQKQQKGSIVVTSSMSSQIINQ---------------------------------------------------------- 155 (260)
T ss_dssp HHHTCCEEEEEECCGGGTSCCE----------------------------------------------------------
T ss_pred cccccceEEEEeeccccccccc----------------------------------------------------------
Confidence 32 35555555433221000
Q ss_pred ccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCch
Q psy2266 160 NFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSY 239 (313)
Q Consensus 160 N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 239 (313)
.+.. ...+..+|
T Consensus 156 ----------------------------~~~~----------------------------------------~~~~~~~Y 167 (260)
T d1h5qa_ 156 ----------------------------SSLN----------------------------------------GSLTQVFY 167 (260)
T ss_dssp ----------------------------EETT----------------------------------------EECSCHHH
T ss_pred ----------------------------cccc----------------------------------------cCccccch
Confidence 0000 01233569
Q ss_pred hhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 240 SVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 240 ~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
++||+|+..|+|.++.|++++ |||||+|+||+|+||+.... .++..+......|++|+|+..
T Consensus 168 ~asKaal~~lt~~lA~el~~~----gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~pl~R~g~pe 229 (260)
T d1h5qa_ 168 NSSKAACSNLVKGLAAEWASA----GIRVNALSPGYVNTDQTAHM---DKKIRDHQASNIPLNRFAQPE 229 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTCTTSSCBCGG
T ss_pred hhhhhhHHHHHHHHHHHhchh----CeEEeecCCCcccCcchhcc---CHHHHHHHHhcCCCCCCcCHH
Confidence 999999999999999999887 99999999999999998773 556666677888999998764
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.95 E-value=7.1e-29 Score=222.97 Aligned_cols=165 Identities=19% Similarity=0.194 Sum_probs=135.9
Q ss_pred cccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 2 KVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 2 ~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
++++++++++.+++||++++++++++++.+.++||+||+||||||+....++.+++ ++|++++++|+++++.++|++.|
T Consensus 44 ~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~ 123 (241)
T d2a4ka1 44 EAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGE 123 (241)
T ss_dssp HHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEeccccccccccchhhhhcccccccccccccccccccccccc
Confidence 35567889999999999999999999999999999999999999999888888887 99999999999999999998888
Q ss_pred cccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcc
Q psy2266 81 LLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATN 160 (313)
Q Consensus 81 ~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N 160 (313)
.|+++++|+++||.+
T Consensus 124 ~~~~~~~i~~~ss~a----------------------------------------------------------------- 138 (241)
T d2a4ka1 124 VLEEGGSLVLTGSVA----------------------------------------------------------------- 138 (241)
T ss_dssp HCCTTCEEEEECCCT-----------------------------------------------------------------
T ss_pred ccccccceeeccccc-----------------------------------------------------------------
Confidence 887766555544422
Q ss_pred cccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchh
Q psy2266 161 FFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYS 240 (313)
Q Consensus 161 ~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 240 (313)
... .++...|+
T Consensus 139 ----------------------------~~~-----------------------------------------~~~~~~Y~ 149 (241)
T d2a4ka1 139 ----------------------------GLG-----------------------------------------AFGLAHYA 149 (241)
T ss_dssp ----------------------------TCC-----------------------------------------HHHHHHHH
T ss_pred ----------------------------ccc-----------------------------------------ccCccccc
Confidence 111 01123599
Q ss_pred hhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 241 VSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 241 ~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
++|+|+.+|+|.|++|++++ |||||+|+||+|+|+|.+. .+++..+......|++|+++.
T Consensus 150 ~sK~al~~lt~~lA~el~~~----gIrvN~I~PG~v~T~~~~~---~~~~~~~~~~~~~p~~r~~~p 209 (241)
T d2a4ka1 150 AGKLGVVGLARTLALELARK----GVRVNVLLPGLIQTPMTAG---LPPWAWEQEVGASPLGRAGRP 209 (241)
T ss_dssp HCSSHHHHHHHHHHHHHTTT----TCEEEEEEECSBCCGGGTT---SCHHHHHHHHHTSTTCSCBCH
T ss_pred hhhHHHHHHHHHHHHHHhHh----CCEEeeeccCcCCCHHHHh---hhHhHHHHHHhCCCCCCCcCH
Confidence 99999999999999999877 9999999999999999876 466777777788999999875
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.95 E-value=7.5e-28 Score=219.11 Aligned_cols=164 Identities=20% Similarity=0.210 Sum_probs=126.0
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC--CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT--APGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~--~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
+.+.+++||++|+++++++++.+.++||+||+||||||+.... .+.+++ ++|++++++|+.+++.++|++.|.|++
T Consensus 54 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~- 132 (268)
T d2bgka1 54 DVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIP- 132 (268)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGG-
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhh-
Confidence 4577889999999999999999999999999999999987654 355555 888888888888888888888777754
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 133 -------------------------------------------------------------------------------- 132 (268)
T d2bgka1 133 -------------------------------------------------------------------------------- 132 (268)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCC-CchhhhHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPE-FSYSVSKL 244 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~ 244 (313)
+++|+||+++|..+... ..+. .+|++||+
T Consensus 133 ----------~~~g~ii~iss~~~~~~----------------------------------------~~~~~~~Y~asKa 162 (268)
T d2bgka1 133 ----------AKKGSIVFTASISSFTA----------------------------------------GEGVSHVYTATKH 162 (268)
T ss_dssp ----------GTCEEEEEECCGGGTCC----------------------------------------CTTSCHHHHHHHH
T ss_pred ----------cCCCCcccccccccccc----------------------------------------ccccccccchhHH
Confidence 12356666666665441 1222 35999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhh--hhhhhcccCCcc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIR--QKIYLLKRTNKF 307 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~~~l~r~~~~ 307 (313)
|+.+|+|.++.|++++ |||||+|+||+|+|||........++..+.. ....|++|+++.
T Consensus 163 al~~lt~~lA~el~~~----gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~p 223 (268)
T d2bgka1 163 AVLGLTTSLCTELGEY----GIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRA 223 (268)
T ss_dssp HHHHHHHHHHHHHGGG----TEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCH
T ss_pred HHHhCHHHHHHHhChh----CeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCH
Confidence 9999999999999877 9999999999999999877544444433332 223477887764
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=3.7e-28 Score=224.81 Aligned_cols=166 Identities=16% Similarity=0.102 Sum_probs=132.0
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.+.++.+++||++|+++++++++.+.++||+||+||||||+....++.+++ ++|++++++|+++++.++|+++|.|++
T Consensus 64 ~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~- 142 (297)
T d1yxma1 64 KQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMK- 142 (297)
T ss_dssp CCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHH-
T ss_pred cCceEEEEeccCCCHHHHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcc-
Confidence 467899999999999999999999999999999999999998878777776 999999999999998888888887755
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 143 -------------------------------------------------------------------------------- 142 (297)
T d1yxma1 143 -------------------------------------------------------------------------------- 142 (297)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
+++|+||++||..... .+....|++||+|
T Consensus 143 ----------~~~g~Ii~~ss~~~~~-----------------------------------------~~~~~~Y~asKaa 171 (297)
T d1yxma1 143 ----------EHGGSIVNIIVPTKAG-----------------------------------------FPLAVHSGAARAG 171 (297)
T ss_dssp ----------HHCEEEEEECCCCTTC-----------------------------------------CTTCHHHHHHHHH
T ss_pred ----------cccccccccccccccc-----------------------------------------ccccccchhHHHH
Confidence 1124455544322211 2233469999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCC-CCcchhhhhhhhhhcccCCccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGV-LTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
+.+|+|.++.+++++ |||||+|+||+|+|++...... ..++..+......|++|+|+..
T Consensus 172 l~~ltk~lA~el~~~----gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pe 231 (297)
T d1yxma1 172 VYNLTKSLALEWACS----GIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE 231 (297)
T ss_dssp HHHHHHHHHHHTGGG----TEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTH
T ss_pred HHHHHHHHHHHhccc----CceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHH
Confidence 999999999999877 9999999999999999765322 2334445556778999998754
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.95 E-value=5.7e-28 Score=219.14 Aligned_cols=171 Identities=27% Similarity=0.298 Sum_probs=133.2
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHc-CCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQH-GGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~-g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
++++.+.+++++.||++++++++++++.+.+++ |.+|+||||||+....++.+++ ++|++++++|+.+++.++|++.|
T Consensus 49 ~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~ 128 (258)
T d1ae1a_ 49 IWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYP 128 (258)
T ss_dssp HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccc
Confidence 456678889999999999999999999999998 6899999999999888888877 89999998888888888888777
Q ss_pred cccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcc
Q psy2266 81 LLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATN 160 (313)
Q Consensus 81 ~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N 160 (313)
.|++
T Consensus 129 ~m~~---------------------------------------------------------------------------- 132 (258)
T d1ae1a_ 129 LLKA---------------------------------------------------------------------------- 132 (258)
T ss_dssp HHHH----------------------------------------------------------------------------
T ss_pred cccc----------------------------------------------------------------------------
Confidence 7654
Q ss_pred cccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchh
Q psy2266 161 FFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYS 240 (313)
Q Consensus 161 ~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 240 (313)
+++|+||++||.++.. +.....+|+
T Consensus 133 ---------------~~~g~ii~isS~~~~~----------------------------------------~~~~~~~Y~ 157 (258)
T d1ae1a_ 133 ---------------SQNGNVIFLSSIAGFS----------------------------------------ALPSVSLYS 157 (258)
T ss_dssp ---------------HTSEEEEEECCGGGTS----------------------------------------CCTTCHHHH
T ss_pred ---------------cccccccccccccccc----------------------------------------ccccchhHH
Confidence 2236777777777654 123345699
Q ss_pred hhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCC---CCcchhhhhhhhhhcccCCccc
Q psy2266 241 VSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGV---LTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 241 ~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
++|+|+..|+|.+++++++. |||||+|+||+|+|||.+.... ...+..+......|++|+++..
T Consensus 158 ~sK~al~~lt~~lA~el~~~----gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pe 224 (258)
T d1ae1a_ 158 ASKGAINQMTKSLACEWAKD----NIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQ 224 (258)
T ss_dssp HHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHhcCcC----cEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHH
Confidence 99999999999999999987 9999999999999999876532 2345556666778999988753
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.95 E-value=5.4e-28 Score=219.59 Aligned_cols=165 Identities=21% Similarity=0.212 Sum_probs=113.3
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC----CCCChh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT----APGSFG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~----~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
.++.+++||++|+++++++++.+.++||+||+||||||+.... .+.+.+ ++|++++++|+++++.++|++.|.|+
T Consensus 57 ~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~ 136 (264)
T d1spxa_ 57 QNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLS 136 (264)
T ss_dssp GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccc
Confidence 3588999999999999999999999999999999999987543 233333 67777777777777776666666654
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 137 ~------------------------------------------------------------------------------- 137 (264)
T d1spxa_ 137 S------------------------------------------------------------------------------- 137 (264)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhH
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSK 243 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 243 (313)
.+|+||+++|..+... +.+...+|++||
T Consensus 138 -------------~~g~iI~~~S~~~~~~---------------------------------------~~~~~~~Y~asK 165 (264)
T d1spxa_ 138 -------------TKGEIVNISSIASGLH---------------------------------------ATPDFPYYSIAK 165 (264)
T ss_dssp -------------HTCEEEEECCTTSSSS---------------------------------------CCTTSHHHHHHH
T ss_pred -------------ccCcceeeeeeccccc---------------------------------------cCCCchhhhhhh
Confidence 1245555555443221 122334699999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCC------CcchhhhhhhhhhcccCCccc
Q psy2266 244 LGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVL------TPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 244 ~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~~~l~r~~~~~ 308 (313)
+|+.+|+|.|+.|++++ |||||+|+||+|+|+|....... ..+..+......|++|+|+..
T Consensus 166 aal~~lt~~lA~el~~~----gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe 232 (264)
T d1spxa_ 166 AAIDQYTRNTAIDLIQH----GIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQ 232 (264)
T ss_dssp HHHHHHHHHHHHHHGGG----TCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHH
T ss_pred hhHHHHHHHHHHHhccc----CeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHH
Confidence 99999999999999987 99999999999999997654211 112223345567999998753
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.95 E-value=4.2e-28 Score=221.34 Aligned_cols=164 Identities=25% Similarity=0.280 Sum_probs=120.1
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCC----hh-HHHHHHHhHHHHHHHHHHHHHHhccc
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGS----FG-QRAETTLATNFFALVTVCHILFPLLR 83 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~----~~-~~~~~~~~vNl~~~i~l~ra~~~~m~ 83 (313)
.++.+++||++|+++++++++.+.++||+||+||||||+.....+.. .+ ++|++++++|++++++++|++.|.|+
T Consensus 57 ~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~ 136 (272)
T d1xkqa_ 57 KQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLV 136 (272)
T ss_dssp GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccc
Confidence 46889999999999999999999999999999999999987654432 22 56777777777777776666666654
Q ss_pred CCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccccc
Q psy2266 84 PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFA 163 (313)
Q Consensus 84 ~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g 163 (313)
+
T Consensus 137 ~------------------------------------------------------------------------------- 137 (272)
T d1xkqa_ 137 A------------------------------------------------------------------------------- 137 (272)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HHHHHHHHhhcccCCCceEEecCC-ccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 164 LVTVCHILFPLLRPHARVVNVASK-LGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 164 ~~~~~~~~~p~l~~~g~iv~vss~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
++|+||+++|. ++.. +.....+|++|
T Consensus 138 -------------~~g~iI~~~Ss~a~~~----------------------------------------~~~~~~~Y~as 164 (272)
T d1xkqa_ 138 -------------SKGEIVNVSSIVAGPQ----------------------------------------AQPDFLYYAIA 164 (272)
T ss_dssp -------------HTCEEEEECCGGGSSS----------------------------------------CCCSSHHHHHH
T ss_pred -------------cCCccccccchhcccc----------------------------------------CCCCcchhhhH
Confidence 12444444443 3332 12234569999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCc------chhhhhhhhhhcccCCccc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTP------EQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~------~~~~~~~~~~~l~r~~~~~ 308 (313)
|+|+..|+|.++.|++++ |||||+|+||+|+|||......... +..+......|++|+|+..
T Consensus 165 Kaal~~ltk~lA~el~~~----gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe 232 (272)
T d1xkqa_ 165 KAALDQYTRSTAIDLAKF----GIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE 232 (272)
T ss_dssp HHHHHHHHHHHHHHHHTT----TCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH
T ss_pred HHHHHHHHHHHHHHhccc----CeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHH
Confidence 999999999999999877 9999999999999999876422111 1112234457999988753
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.95 E-value=8.5e-28 Score=217.60 Aligned_cols=169 Identities=20% Similarity=0.145 Sum_probs=135.1
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
++++.|++++.++||++|+++++++++.+.+++|+||+||||||+....++.+.+ ++|++++++|+++++.++|++.|.
T Consensus 50 ~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 129 (259)
T d1ja9a_ 50 ELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH 129 (259)
T ss_dssp HHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhh
Confidence 4567888999999999999999999999999999999999999998877777666 999999999999999998888888
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++++++++++|..
T Consensus 130 m~~~g~~iii~s~~------------------------------------------------------------------ 143 (259)
T d1ja9a_ 130 CRRGGRIILTSSIA------------------------------------------------------------------ 143 (259)
T ss_dssp EEEEEEEEEECCGG------------------------------------------------------------------
T ss_pred hhcCCccccccccc------------------------------------------------------------------
Confidence 87766655555433
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
+... +.+....|++
T Consensus 144 ---------------------------~~~~---------------------------------------~~~~~~~Y~a 157 (259)
T d1ja9a_ 144 ---------------------------AVMT---------------------------------------GIPNHALYAG 157 (259)
T ss_dssp ---------------------------GTCC---------------------------------------SCCSCHHHHH
T ss_pred ---------------------------cccc---------------------------------------CCCCchhHHH
Confidence 2221 0123346999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc---------CCCCcch-hhhhhhhhhcccCCcc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK---------GVLTPEQ-GKIRQKIYLLKRTNKF 307 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~---------~~~~~~~-~~~~~~~~~l~r~~~~ 307 (313)
||+|+..|+|.|+++++++ |||||+|+||+|+|||.+.. ...++++ .+......|++|+|+.
T Consensus 158 sK~al~~l~r~lA~e~~~~----gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p 229 (259)
T d1ja9a_ 158 SKAAVEGFCRAFAVDCGAK----GVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYP 229 (259)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCH
T ss_pred HHHHHHHHHHHHHHHHhhc----CeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCH
Confidence 9999999999999999877 99999999999999986431 1122222 3445677899999874
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.94 E-value=1.1e-27 Score=219.01 Aligned_cols=165 Identities=19% Similarity=0.167 Sum_probs=123.6
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC--CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT--APGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~--~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
.++.+++||++|+++++++++.+.++||+||+||||||+.... ...+++ ++|++++++|+.+++.++|++.|.|+++
T Consensus 56 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~ 135 (274)
T d1xhla_ 56 EKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT 135 (274)
T ss_dssp GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred cceEEEEeeCCCHHHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc
Confidence 3678999999999999999999999999999999999986544 333334 7888888888888888888877777541
Q ss_pred ceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHH
Q psy2266 86 ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALV 165 (313)
Q Consensus 86 g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~ 165 (313)
T Consensus 136 -------------------------------------------------------------------------------- 135 (274)
T d1xhla_ 136 -------------------------------------------------------------------------------- 135 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHH
Q psy2266 166 TVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLG 245 (313)
Q Consensus 166 ~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 245 (313)
++|+|+++||.++.. +..+..+|++||+|
T Consensus 136 -----------~~g~ii~~ss~~~~~----------------------------------------~~~~~~~Y~asKaa 164 (274)
T d1xhla_ 136 -----------KGEIVNVSSIVAGPQ----------------------------------------AHSGYPYYACAKAA 164 (274)
T ss_dssp -----------TCEEEEECCGGGSSS----------------------------------------CCTTSHHHHHHHHH
T ss_pred -----------ccccccchhhhhccc----------------------------------------cCCCCceehhhhhH
Confidence 124555555555443 12234569999999
Q ss_pred HHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCc--c----hhhhhhhhhhcccCCccc
Q psy2266 246 VAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTP--E----QGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 246 l~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~--~----~~~~~~~~~~l~r~~~~~ 308 (313)
+.+|+|.++.+++++ |||||+|+||+|+||+......... + ..+......|++|+|+..
T Consensus 165 l~~ltk~lA~ela~~----gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pe 229 (274)
T d1xhla_ 165 LDQYTRCTAIDLIQH----GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPE 229 (274)
T ss_dssp HHHHHHHHHHHHGGG----TCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH
T ss_pred HHHHHHHHHHHHhHh----CCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHH
Confidence 999999999999987 9999999999999999776421111 1 112223446999998753
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.94 E-value=5.7e-28 Score=217.21 Aligned_cols=160 Identities=21% Similarity=0.196 Sum_probs=126.0
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.+..+.||++|++++++++ ++||+||+||||||+....++.+++ ++|++++++|+.++++++|++.|.|.+.
T Consensus 51 ~~~~~~~Dv~~~~~v~~~~----~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~--- 123 (242)
T d1cyda_ 51 GIEPVCVDLGDWDATEKAL----GGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR--- 123 (242)
T ss_dssp TCEEEECCTTCHHHHHHHH----TTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---
T ss_pred CCeEEEEeCCCHHHHHHHH----HHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhh---
Confidence 4778899999999887655 5789999999999998877887776 8999999888888888888888764320
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 124 -------------------------------------------------------------------------------- 123 (242)
T d1cyda_ 124 -------------------------------------------------------------------------------- 123 (242)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
..+|+||+++|..+.. +.+...+|++||+|+..
T Consensus 124 -------~~~g~ii~isS~~~~~----------------------------------------~~~~~~~Y~asKaal~~ 156 (242)
T d1cyda_ 124 -------GVPGSIVNVSSMVAHV----------------------------------------TFPNLITYSSTKGAMTM 156 (242)
T ss_dssp -------TCCEEEEEECCGGGTS----------------------------------------CCTTBHHHHHHHHHHHH
T ss_pred -------cccCcccccchhhccc----------------------------------------cCCccccccchHHHHHH
Confidence 1125666666665543 12234569999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
|+|.++.|++++ |||||+|+||+|+|||.+... ..++..+......|++|+++..
T Consensus 157 lt~~lA~e~~~~----gIrvN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~pl~R~~~pe 211 (242)
T d1cyda_ 157 LTKAMAMELGPH----KIRVNSVNPTVVLTDMGKKVS-ADPEFARKLKERHPLRKFAEVE 211 (242)
T ss_dssp HHHHHHHHHGGG----TEEEEEEEECCBTTHHHHHHT-CCHHHHHHHHHHSTTSSCBCHH
T ss_pred HHHHHHHHhCcc----CeecccCCCCCccCHHHHhhc-CCHHHHHHHHhcCCCCCCcCHH
Confidence 999999999887 999999999999999987652 3345556667788999998764
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.2e-27 Score=215.44 Aligned_cols=161 Identities=22% Similarity=0.285 Sum_probs=126.6
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
++++.|.+++.+.||++|.++++++++.+.+++|++|+||||||+.....+.+.+ ++|++++++|++|++.++|+++|.
T Consensus 50 ~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~ 129 (244)
T d1yb1a_ 50 KCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPA 129 (244)
T ss_dssp HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhh
Confidence 3556788999999999999999999999999999999999999999888777776 888888887777777777777776
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|+++
T Consensus 130 m~~~---------------------------------------------------------------------------- 133 (244)
T d1yb1a_ 130 MTKN---------------------------------------------------------------------------- 133 (244)
T ss_dssp HHHT----------------------------------------------------------------------------
T ss_pred HHhc----------------------------------------------------------------------------
Confidence 6441
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
++|+||++||.++..+. ....+|++
T Consensus 134 ---------------~~G~Iv~isS~~~~~~~----------------------------------------~~~~~Y~a 158 (244)
T d1yb1a_ 134 ---------------NHGHIVTVASAAGHVSV----------------------------------------PFLLAYCS 158 (244)
T ss_dssp ---------------TCEEEEEECCCC-CCCH----------------------------------------HHHHHHHH
T ss_pred ---------------CCceEEEeecchhcCCC----------------------------------------CCcHHHHH
Confidence 23677777777776521 12246999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc-----CCCCcchhhhh
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK-----GVLTPEQGKIR 295 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~-----~~~~~~~~~~~ 295 (313)
||+|+.+|+++|+.|+++. ...||+||+|+||+|+|+|.+.. ...+|++.+..
T Consensus 159 sKaal~~~~~~La~El~~~-~~~gI~V~~i~PG~v~T~~~~~~~~~~~~~~~pe~va~~ 216 (244)
T d1yb1a_ 159 SKFAAVGFHKTLTDELAAL-QITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNR 216 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCTTEEEEEEEETHHHHCSTTCTHHHHCCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhh-cCCCEEEEEEEcCCCCChhhhCcCccccCCCCHHHHHHH
Confidence 9999999999999999763 23489999999999999987662 23345555444
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.94 E-value=2.3e-27 Score=216.91 Aligned_cols=169 Identities=17% Similarity=0.193 Sum_probs=122.8
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCC-----CCh-hHHHHHHHhHHHHHHHHHHH
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP-----GSF-GQRAETTLATNFFALVTVCH 76 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~-----~~~-~~~~~~~~~vNl~~~i~l~r 76 (313)
+.++.+.++..++||++++++++++++.+.++||+||+||||||+...... .+. ++.|++++++|++++++++|
T Consensus 45 ~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~ 124 (276)
T d1bdba_ 45 LETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVK 124 (276)
T ss_dssp HHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHH
Confidence 345567889999999999999999999999999999999999998754421 222 25577777666666666666
Q ss_pred HHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhh
Q psy2266 77 ILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETT 156 (313)
Q Consensus 77 a~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~ 156 (313)
++.|.|++
T Consensus 125 ~~~p~m~~------------------------------------------------------------------------ 132 (276)
T d1bdba_ 125 ACLPALVA------------------------------------------------------------------------ 132 (276)
T ss_dssp HHHHHHHH------------------------------------------------------------------------
T ss_pred HHHHHHHh------------------------------------------------------------------------
Confidence 66665533
Q ss_pred hhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCC
Q psy2266 157 LATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPE 236 (313)
Q Consensus 157 ~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
++|+||+++|..+.. +....
T Consensus 133 --------------------~~g~iI~i~S~~~~~----------------------------------------~~~~~ 152 (276)
T d1bdba_ 133 --------------------SRGNVIFTISNAGFY----------------------------------------PNGGG 152 (276)
T ss_dssp --------------------HTCEEEEECCGGGTS----------------------------------------TTSSC
T ss_pred --------------------cCCCceeeeechhcc----------------------------------------CCCCC
Confidence 135666666666544 12334
Q ss_pred CchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccC-------CCCcchhhhhhhhhhcccCCccc
Q psy2266 237 FSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG-------VLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 237 ~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
.+|++||+|+..|+|.++.|+++ +||||+|+||+|+|+|..... ...++..+......|++|+|+..
T Consensus 153 ~~Y~asKaal~~ltr~lA~ela~-----~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe 226 (276)
T d1bdba_ 153 PLYTAAKHAIVGLVRELAFELAP-----YVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVE 226 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-----TCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGG
T ss_pred chHHHHHHHHHHHHHHHHHHhhc-----ceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHH
Confidence 56999999999999999999863 499999999999999865421 12233334556778999998764
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.2e-27 Score=215.15 Aligned_cols=160 Identities=21% Similarity=0.173 Sum_probs=125.5
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.+..+++|++|++++++++ +++|+||+||||||+....++.+++ ++|++++++|+.++++++|++.|.|.+.
T Consensus 53 ~~~~~~~Dv~d~~~v~~~~----~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~--- 125 (244)
T d1pr9a_ 53 GIEPVCVDLGDWEATERAL----GSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR--- 125 (244)
T ss_dssp TCEEEECCTTCHHHHHHHH----TTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---
T ss_pred CCeEEEEeCCCHHHHHHHH----HHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHh---
Confidence 4678899999999887665 5689999999999998877887776 9999999888888888888887754210
Q ss_pred EEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHH
Q psy2266 89 VNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVC 168 (313)
Q Consensus 89 V~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~ 168 (313)
T Consensus 126 -------------------------------------------------------------------------------- 125 (244)
T d1pr9a_ 126 -------------------------------------------------------------------------------- 125 (244)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHH
Q psy2266 169 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAK 248 (313)
Q Consensus 169 ~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~ 248 (313)
.++|+||++||..+... .....+|++||+|+..
T Consensus 126 -------~~~g~Ii~isS~~~~~~----------------------------------------~~~~~~Y~asKaal~~ 158 (244)
T d1pr9a_ 126 -------GVPGAIVNVSSQCSQRA----------------------------------------VTNHSVYCSTKGALDM 158 (244)
T ss_dssp -------TCCEEEEEECCGGGTSC----------------------------------------CTTBHHHHHHHHHHHH
T ss_pred -------CCcceEeeccccccccc----------------------------------------ccchhhhhhhHHHHHH
Confidence 11356666666666541 2234569999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 249 LSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 249 l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
|+|.++++++++ |||||+|+||+|+|+|.+... ..++..+......|++|+++..
T Consensus 159 lt~~lA~el~~~----gIrvN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~~pl~R~~~pe 213 (244)
T d1pr9a_ 159 LTKVMALELGPH----KIRVNAVNPTVVMTSMGQATW-SDPHKAKTMLNRIPLGKFAEVE 213 (244)
T ss_dssp HHHHHHHHHGGG----TEEEEEEEECCBCSHHHHTTS-CSHHHHHHHHTTCTTCSCBCHH
T ss_pred HHHHHHHHhCCC----cEEEEEEeeCcCcChHHhhhc-cChHHHHHHHhcCCCCCCcCHH
Confidence 999999999877 999999999999999987642 3344556666788999998753
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.94 E-value=1.3e-27 Score=215.62 Aligned_cols=163 Identities=17% Similarity=0.104 Sum_probs=120.7
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC----CCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT----APGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~----~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
.+++...++||++|+++++++++.+.++||+||+||||||+.... .+.+.+ ++|+..+++|+.+++.++|++.|.
T Consensus 56 ~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~ 135 (256)
T d1ulua_ 56 ALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPL 135 (256)
T ss_dssp HTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTT
T ss_pred ccCcccccccccCCHHHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHH
Confidence 355678899999999999999999999999999999999987532 333444 889999988888888877777776
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|+++|+||
T Consensus 136 ~~~~G~Iv------------------------------------------------------------------------ 143 (256)
T d1ulua_ 136 LREGGGIV------------------------------------------------------------------------ 143 (256)
T ss_dssp EEEEEEEE------------------------------------------------------------------------
T ss_pred hccCCEEE------------------------------------------------------------------------
Confidence 65555555
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
++||..+.. +.....+|++
T Consensus 144 ---------------------~isS~~~~~----------------------------------------~~~~~~~Y~a 162 (256)
T d1ulua_ 144 ---------------------TLTYYASEK----------------------------------------VVPKYNVMAI 162 (256)
T ss_dssp ---------------------EEECGGGTS----------------------------------------BCTTCHHHHH
T ss_pred ---------------------EEeehHhcC----------------------------------------CCCCchHHHH
Confidence 444444433 1223356999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
||+|+..|+|.++.|++++ |||||+|+||+|+|++..... ..++..+......|++|+++.
T Consensus 163 sKaal~~ltr~lA~ela~~----gIrVN~I~PG~i~t~~~~~~~-~~~~~~~~~~~~~pl~R~~~p 223 (256)
T d1ulua_ 163 AKAALEASVRYLAYELGPK----GVRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTAPLRRNITQ 223 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TCEEEEEEECCC-----------CHHHHHHHHHHSTTSSCCCH
T ss_pred HHHHHHHHHHHHHHHhccc----CCEEeeeccceeeeccccchh-hhHHHHHHHHhcCCCCCCcCH
Confidence 9999999999999999877 999999999999999977642 234555666778899998875
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=7.4e-27 Score=211.55 Aligned_cols=168 Identities=19% Similarity=0.205 Sum_probs=129.9
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
++++++++||++++++++++++.+.++||+||+||||||+....++.+++ ++|++.+++|+.++++++|++.|.|++.+
T Consensus 60 ~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~ 139 (257)
T d1xg5a_ 60 PGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN 139 (257)
T ss_dssp SSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred CceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhc
Confidence 35788999999999999999999999999999999999999888888877 99999999999999999998888775410
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
T Consensus 140 -------------------------------------------------------------------------------- 139 (257)
T d1xg5a_ 140 -------------------------------------------------------------------------------- 139 (257)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
.++|+||++||.++.... +......|+++|+|+
T Consensus 140 ---------~~~g~Ii~isS~~~~~~~--------------------------------------p~~~~~~Y~~sKaal 172 (257)
T d1xg5a_ 140 ---------VDDGHIININSMSGHRVL--------------------------------------PLSVTHFYSATKYAV 172 (257)
T ss_dssp ---------CCSCEEEEECCGGGTSCC--------------------------------------SCGGGHHHHHHHHHH
T ss_pred ---------cCCCceEEEechHhcCCC--------------------------------------CCcccHHHHHHHHHH
Confidence 123677777777765311 112234599999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
..|+|.|+.||... ++||+||+|+||+++|++..... ....+......|++|+++.
T Consensus 173 ~~ltr~la~el~~~--~~~I~vn~i~PG~i~t~~~~~~~---~~~~~~~~~~~~~~r~~~p 228 (257)
T d1xg5a_ 173 TALTEGLRQELREA--QTHIRATCISPGVVETQFAFKLH---DKDPEKAAATYEQMKCLKP 228 (257)
T ss_dssp HHHHHHHHHHHHHT--TCCCEEEEEEESCBCSSHHHHHT---TTCHHHHHHHHC---CBCH
T ss_pred HhCHHHHHHHHHhC--CCCEEEEEEeCCCCCChhhhhcC---hhhHHHHHhcCCCCCCcCH
Confidence 99999999998422 34999999999999999977642 2333445666788887654
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=5.9e-27 Score=211.65 Aligned_cols=162 Identities=22% Similarity=0.279 Sum_probs=124.0
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
+.++.+++||++|+++++++++.+.++||+||+||||||+... ++|++++++|+.+++.+++++.|.|++...
T Consensus 53 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAg~~~~-------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~ 125 (254)
T d2gdza1 53 PQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE-------KNWEKTLQINLVSVISGTYLGLDYMSKQNG 125 (254)
T ss_dssp GGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCS-------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGT
T ss_pred CCcEEEEEeecCCHHHHHHHHHHHHHHcCCcCeeccccccccc-------ccchheeeeehhhHHHHHHHHHHHHHHhhc
Confidence 5678999999999999999999999999999999999999653 247777777777777777777777654100
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 126 -------------------------------------------------------------------------------- 125 (254)
T d2gdza1 126 -------------------------------------------------------------------------------- 125 (254)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
..+|+||++||.++..+ .....+|++||+|+.
T Consensus 126 --------~~~g~Iv~isS~~~~~~----------------------------------------~~~~~~Y~asKaal~ 157 (254)
T d2gdza1 126 --------GEGGIIINMSSLAGLMP----------------------------------------VAQQPVYCASKHGIV 157 (254)
T ss_dssp --------CCCEEEEEECCGGGTSC----------------------------------------CTTCHHHHHHHHHHH
T ss_pred --------CCCcEEEeeccHhhccC----------------------------------------CCCccchHHHHHHHH
Confidence 11377888888887652 233456999999999
Q ss_pred HHHHH--HHhhhccCCCCCCeEEEeecccccccccccccCC-----CCcchhhhhhhhhhcccCCccc
Q psy2266 248 KLSFI--QHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGV-----LTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 248 ~l~~~--~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~-----~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
.|+|. |+.++++. |||||+|+||+|+|||.+.... ...+..+......|++|+++..
T Consensus 158 ~ltrs~ala~e~~~~----gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe 221 (254)
T d2gdza1 158 GFTRSAALAANLMNS----GVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPP 221 (254)
T ss_dssp HHHHHHHHHHHHHTC----CEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHH
T ss_pred HHHHHHHHHHHhcCC----CEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHH
Confidence 99996 67788766 9999999999999999776421 1112233445667899988753
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.93 E-value=1.6e-26 Score=210.49 Aligned_cols=170 Identities=18% Similarity=0.162 Sum_probs=134.3
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
++++.+.++.+++||++|+++++++++.+.++||+||++|||||.....++.+.+ ++|++++++|+++++.++|++.|.
T Consensus 62 ~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~ 141 (272)
T d1g0oa_ 62 AIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH 141 (272)
T ss_dssp HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccc
Confidence 3456788999999999999999999999999999999999999998877777776 999999999999999999988888
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
|++++++++++|..
T Consensus 142 m~~~g~~i~i~s~~------------------------------------------------------------------ 155 (272)
T d1g0oa_ 142 LEIGGRLILMGSIT------------------------------------------------------------------ 155 (272)
T ss_dssp SCTTCEEEEECCGG------------------------------------------------------------------
T ss_pred cccccccccccccc------------------------------------------------------------------
Confidence 87766666665533
Q ss_pred ccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 162 FALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
+... .......|++
T Consensus 156 ---------------------------~~~~---------------------------------------~~~~~~~Y~a 169 (272)
T d1g0oa_ 156 ---------------------------GQAK---------------------------------------AVPKHAVYSG 169 (272)
T ss_dssp ---------------------------GTCS---------------------------------------SCSSCHHHHH
T ss_pred ---------------------------cccc---------------------------------------cccchhhHHH
Confidence 2210 1223345999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccC--------CCCcchh--hhhhhhhhcccCCccc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG--------VLTPEQG--KIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~--------~~~~~~~--~~~~~~~~l~r~~~~~ 308 (313)
||+|+.+|+|.++++++++ |||||+|+||+|+|+|.+... ....++. .......|++|+++..
T Consensus 170 sKaal~~ltk~lA~e~~~~----gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~pe 242 (272)
T d1g0oa_ 170 SKGAIETFARCMAIDMADK----KITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI 242 (272)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHhchh----CeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHH
Confidence 9999999999999999877 999999999999999865421 1111111 1234567999988764
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.93 E-value=3.9e-27 Score=218.37 Aligned_cols=156 Identities=19% Similarity=0.186 Sum_probs=124.5
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.+...+.+|++|.++++++++.+.++||+||+||||||+....++.+++ ++|++++++|+++++.++|+++|.|++
T Consensus 62 ~~~~~~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~--- 138 (302)
T d1gz6a_ 62 RRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKK--- 138 (302)
T ss_dssp HTTCEEEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred hcccccccccchHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHh---
Confidence 3445678999999999999999999999999999999999888888877 999999999999998888888888754
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
T Consensus 139 -------------------------------------------------------------------------------- 138 (302)
T d1gz6a_ 139 -------------------------------------------------------------------------------- 138 (302)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
+++|+||++||..+.. +..+..+|++||+|+.
T Consensus 139 --------~~~G~IV~isS~~~~~----------------------------------------~~~~~~~Y~asKaal~ 170 (302)
T d1gz6a_ 139 --------QNYGRIIMTASASGIY----------------------------------------GNFGQANYSAAKLGLL 170 (302)
T ss_dssp --------HTCEEEEEECCHHHHH----------------------------------------CCTTCHHHHHHHHHHH
T ss_pred --------CCCcEEEEeCChhhcC----------------------------------------CCCCcHHHHHHHHHHH
Confidence 1235666666666654 1233456999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccccC-----CCCcchhhhhhhhh
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG-----VLTPEQGKIRQKIY 299 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~-----~~~~~~~~~~~~~~ 299 (313)
.|+|.++.|++++ |||||+|+||++.|++..... ...|++.+....++
T Consensus 171 ~lt~~la~E~~~~----gIrVN~I~PG~~~t~~~~~~~~~~~~~~~PedvA~~v~fL 223 (302)
T d1gz6a_ 171 GLANTLVIEGRKN----NIHCNTIAPNAGSRMTETVMPEDLVEALKPEYVAPLVLWL 223 (302)
T ss_dssp HHHHHHHHHTGGG----TEEEEEEEEECCSTTTGGGSCHHHHHHSCGGGTHHHHHHH
T ss_pred HHHHHHHHHHhcc----CCceeeeCCCCCCcchhhcCcHhhHhcCCHHHHHHHHHHH
Confidence 9999999998877 999999999999888765431 24456655554443
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.93 E-value=2e-26 Score=207.11 Aligned_cols=172 Identities=25% Similarity=0.354 Sum_probs=121.6
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCC--CcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGG--LDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~--iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
+..+.++.+++||++|+++++++++.+.+.+|+ ||+||||||+... ....+.+ ++|++++++|+.|+++++|+++|
T Consensus 47 ~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p 126 (250)
T d1yo6a1 47 SIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLP 126 (250)
T ss_dssp TCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHH
T ss_pred HhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 345678999999999999999999999998874 9999999998764 4555665 99999999999999999999999
Q ss_pred cccCCc--eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhh
Q psy2266 81 LLRPHA--RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLA 158 (313)
Q Consensus 81 ~m~~~g--~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~ 158 (313)
+|++.+ +..
T Consensus 127 ~l~~~~~~~~~--------------------------------------------------------------------- 137 (250)
T d1yo6a1 127 LLKNAASKESG--------------------------------------------------------------------- 137 (250)
T ss_dssp HHHHHHHSSCS---------------------------------------------------------------------
T ss_pred HHHHhccCCCC---------------------------------------------------------------------
Confidence 996521 000
Q ss_pred cccccHHHHHHHHhhcc-cCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCC
Q psy2266 159 TNFFALVTVCHILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEF 237 (313)
Q Consensus 159 ~N~~g~~~~~~~~~p~l-~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
..+ ...+++++++|..+....... ...+.+..
T Consensus 138 --------------~~~~~~~~~~i~~s~~~~~~~~~~~---------------------------------~~~~~~~~ 170 (250)
T d1yo6a1 138 --------------DQLSVSRAAVITISSGLGSITDNTS---------------------------------GSAQFPVL 170 (250)
T ss_dssp --------------SCCCTTTCEEEEECCGGGCSTTCCS---------------------------------TTSSSCBH
T ss_pred --------------ccccceeccccccccccccccCCcc---------------------------------cccchhHH
Confidence 000 123778888877665422111 01233445
Q ss_pred chhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhh
Q psy2266 238 SYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQ 296 (313)
Q Consensus 238 ~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 296 (313)
+|++||+|+++|++.++.++++. ||+||+|+||+|+|+|.......++++.....
T Consensus 171 aY~aSKaal~~l~~~la~el~~~----gI~v~~i~PG~v~T~m~~~~~~~~~e~~a~~~ 225 (250)
T d1yo6a1 171 AYRMSKAAINMFGRTLAVDLKDD----NVLVVNFCPGWVQTNLGGKNAALTVEQSTAEL 225 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGG----TCEEEEEECCCC-------------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccc----CeEEEEEecCCCCCCCCCCCCCCCHHHHHHHH
Confidence 69999999999999999998876 99999999999999998876667777765443
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.93 E-value=1.6e-26 Score=206.39 Aligned_cols=154 Identities=17% Similarity=0.225 Sum_probs=119.5
Q ss_pred eEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEE
Q psy2266 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVN 90 (313)
Q Consensus 12 ~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~ 90 (313)
.++.||+++. ++.+.+++|+||+||||||+....++++++ ++|++++++|+.+++.++|++.|.|++
T Consensus 47 ~~~~~Dv~~~------~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~------ 114 (234)
T d1o5ia_ 47 RYVVCDLRKD------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKE------ 114 (234)
T ss_dssp EEEECCTTTC------HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH------
T ss_pred cEEEcchHHH------HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccc------
Confidence 4578999763 455677899999999999998777777776 889999888888888888888777754
Q ss_pred EecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHH
Q psy2266 91 VASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHI 170 (313)
Q Consensus 91 isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 170 (313)
T Consensus 115 -------------------------------------------------------------------------------- 114 (234)
T d1o5ia_ 115 -------------------------------------------------------------------------------- 114 (234)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHH
Q psy2266 171 LFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLS 250 (313)
Q Consensus 171 ~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~ 250 (313)
+++|+||+++|..+.. +......|++||+|+..|+
T Consensus 115 -----~~~G~ii~i~S~~~~~----------------------------------------~~~~~~~Y~asKaal~~lt 149 (234)
T d1o5ia_ 115 -----KGWGRIVAITSFSVIS----------------------------------------PIENLYTSNSARMALTGFL 149 (234)
T ss_dssp -----HTCEEEEEECCGGGTS----------------------------------------CCTTBHHHHHHHHHHHHHH
T ss_pred -----cccccccccccccccc----------------------------------------cccccccchhHHHHHHHHH
Confidence 1225566666655543 1233456999999999999
Q ss_pred HHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 251 FIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 251 ~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
|.+++|++++ |||||+|+||+|+|++.+.. ..++..+......|++|+++..
T Consensus 150 k~lA~ela~~----gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~~pl~R~~~pe 201 (234)
T d1o5ia_ 150 KTLSFEVAPY----GITVNCVAPGWTETERVKEL--LSEEKKKQVESQIPMRRMAKPE 201 (234)
T ss_dssp HHHHHHHGGG----TEEEEEEEECSBCCTTHHHH--SCHHHHHHHHTTSTTSSCBCHH
T ss_pred HHHHHHhccc----CeEEeecccCccchhhhhhh--cCHHHHHHHHhcCCCCCCcCHH
Confidence 9999999987 99999999999999997764 3444555667788999998753
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.93 E-value=5.4e-26 Score=204.08 Aligned_cols=161 Identities=25% Similarity=0.354 Sum_probs=126.7
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHH--HcCCCcEEEECCCCCCCC-CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQT--QHGGLDLLVNNAGIYRDT-APGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~--~~g~iDilVnNAGi~~~~-~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
.++++.++.||++|+++++++++.+.+ ++|+||+||||||+.... .+.+++ ++|++++++|+.+++.++|++.|.|
T Consensus 51 ~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l 130 (248)
T d1snya_ 51 NHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLL 130 (248)
T ss_dssp HCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEEEeccHHHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 356899999999999999999999854 689999999999997655 455665 8999999999999999999999999
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
++...-
T Consensus 131 ~~~~~~-------------------------------------------------------------------------- 136 (248)
T d1snya_ 131 KKAAKA-------------------------------------------------------------------------- 136 (248)
T ss_dssp HHHHHH--------------------------------------------------------------------------
T ss_pred HHhhhc--------------------------------------------------------------------------
Confidence 752100
Q ss_pred cHHHHHHHHhhcc-cCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 163 ALVTVCHILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 163 g~~~~~~~~~p~l-~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
.....+ ..+|+||+++|.++..... ...+..+|++
T Consensus 137 -------~~~~~~~~~~g~ii~i~S~~g~~~~~-------------------------------------~~~~~~~Y~a 172 (248)
T d1snya_ 137 -------NESQPMGVGRAAIINMSSILGSIQGN-------------------------------------TDGGMYAYRT 172 (248)
T ss_dssp -------TTTSCSSTTTCEEEEECCGGGCSTTC-------------------------------------CSCCCHHHHH
T ss_pred -------cccccccccccccccccccccccCCC-------------------------------------CCCChHHHHH
Confidence 000000 2348899999988765211 1223457999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTP 289 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~ 289 (313)
||+|+++|++.++.+++++ ||+||+|+||+|+|+|.+......+
T Consensus 173 SKaal~~lt~~la~e~~~~----gI~vn~v~PG~v~T~m~~~~~~~~~ 216 (248)
T d1snya_ 173 SKSALNAATKSLSVDLYPQ----RIMCVSLHPGWVKTDMGGSSAPLDV 216 (248)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TCEEEEECCCSBCSTTTCTTCSBCH
T ss_pred HHHHHHHHHHHHHHHhCCC----CeEEEEcCCCcccCCcccccCCCCc
Confidence 9999999999999999877 9999999999999999887544343
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=2.1e-26 Score=211.53 Aligned_cols=142 Identities=22% Similarity=0.237 Sum_probs=111.5
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
..++++.++.||++|.++++++++.+. +|++|+||||||+.....+++++ ++|++++++|++|+++++|+++|.|++
T Consensus 54 ~~~~~~~~~~~Dv~~~~~~~~~~~~~~--~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~ 131 (285)
T d1jtva_ 54 CPPGSLETLQLDVRDSKSVAAARERVT--EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKR 131 (285)
T ss_dssp CCTTSEEEEECCTTCHHHHHHHHHTCT--TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred ccCCceEEEeccccchHhhhhhhhhcc--ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHH
Confidence 457789999999999999999998874 48999999999999888777766 888888888888888877777777754
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 132 -------------------------------------------------------------------------------- 131 (285)
T d1jtva_ 132 -------------------------------------------------------------------------------- 131 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
+++|+||++||.++... .+...+|++||+
T Consensus 132 -----------~~~G~Iv~isS~~g~~~----------------------------------------~~~~~~Y~asKa 160 (285)
T d1jtva_ 132 -----------RGSGRVLVTGSVGGLMG----------------------------------------LPFNDVYCASKF 160 (285)
T ss_dssp -----------HTCEEEEEEEEGGGTSC----------------------------------------CTTCHHHHHHHH
T ss_pred -----------cCCCceEEEechhhcCC----------------------------------------CCCchHHHHHHH
Confidence 12356666666666541 223456999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
|+.+|+++|+.|++++ ||+||+|+||+|+|+|.+..
T Consensus 161 al~~l~~~la~El~~~----gIrVn~V~PG~v~T~~~~~~ 196 (285)
T d1jtva_ 161 ALEGLCESLAVLLLPF----GVHLSLIECGPVHTAFMEKV 196 (285)
T ss_dssp HHHHHHHHHHHHHGGG----TEEEEEEEECCBCC------
T ss_pred HHHHHHHHHHHHhhcc----CcEEEEEecCCCCChHHHHh
Confidence 9999999999999877 99999999999999998764
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.92 E-value=7.7e-26 Score=204.53 Aligned_cols=138 Identities=25% Similarity=0.316 Sum_probs=103.5
Q ss_pred CCceeEEEeecC-CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCc
Q psy2266 8 NNNVRFHQLDIL-DQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHA 86 (313)
Q Consensus 8 g~~~~~~~~Dvs-~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g 86 (313)
+.++.++.||++ +.++++++++.+.+++|+||+||||||+.. .+.|++++++|+++++.++|+++|.|.+..
T Consensus 54 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~-------~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~ 126 (254)
T d1sbya1 54 KVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILD-------DHQIERTIAINFTGLVNTTTAILDFWDKRK 126 (254)
T ss_dssp TSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-------TTCHHHHHHHHTHHHHHHHHHHHHHHCGGG
T ss_pred CCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCCEEEeCCCCCC-------HHHHHHHHHHHhHHHHHHHHHHHHHhhhcc
Confidence 446777888887 566788888888888888888888888642 144566666666666665555555553310
Q ss_pred eEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHH
Q psy2266 87 RVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVT 166 (313)
Q Consensus 87 ~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~ 166 (313)
.
T Consensus 127 ~------------------------------------------------------------------------------- 127 (254)
T d1sbya1 127 G------------------------------------------------------------------------------- 127 (254)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHH
Q psy2266 167 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGV 246 (313)
Q Consensus 167 ~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al 246 (313)
.++|+||++||.++..+ .....+|++||+|+
T Consensus 128 ---------~~~g~Ii~isS~~~~~~----------------------------------------~~~~~~Y~asKaal 158 (254)
T d1sbya1 128 ---------GPGGIIANICSVTGFNA----------------------------------------IHQVPVYSASKAAV 158 (254)
T ss_dssp ---------CCCEEEEEECCGGGTSC----------------------------------------CTTSHHHHHHHHHH
T ss_pred ---------CCCceEEEEechhhccC----------------------------------------CCCCHHHHHHHHHH
Confidence 12388999999999762 23445699999999
Q ss_pred HHHHHHHHhhhccCCCCCCeEEEeeccccccccccccc
Q psy2266 247 AKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHK 284 (313)
Q Consensus 247 ~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~ 284 (313)
..|+|.++.++++. |||||+|+||+|+|||.+.+
T Consensus 159 ~~~t~~la~el~~~----gIrVn~I~PG~v~T~~~~~~ 192 (254)
T d1sbya1 159 VSFTNSLAKLAPIT----GVTAYSINPGITRTPLVHTF 192 (254)
T ss_dssp HHHHHHHHHHHHHH----SEEEEEEEECSEESHHHHSC
T ss_pred HHHHHHHHhhcccc----CeEEEEEEeCCCcCcccccc
Confidence 99999999999877 99999999999999997764
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.92 E-value=3.5e-25 Score=199.92 Aligned_cols=166 Identities=17% Similarity=0.115 Sum_probs=125.1
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHH----HcCCCcEEEECCCCCCCC---CCCChh-HHHHHHHhHHHHHHHHHHHHH
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQT----QHGGLDLLVNNAGIYRDT---APGSFG-QRAETTLATNFFALVTVCHIL 78 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~----~~g~iDilVnNAGi~~~~---~~~~~~-~~~~~~~~vNl~~~i~l~ra~ 78 (313)
.+.++.+++||++++++++++++.+.+ .++.+|+||||||+.... .+++++ ++|++++++|++++++++|++
T Consensus 58 ~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~ 137 (259)
T d1oaaa_ 58 PDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGT 137 (259)
T ss_dssp TTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCceEEEEEccCCCHHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHH
Confidence 356789999999999999999999876 346899999999987543 345555 888888888888888888888
Q ss_pred HhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhh
Q psy2266 79 FPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLA 158 (313)
Q Consensus 79 ~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~ 158 (313)
.|.|++.+
T Consensus 138 ~~~m~~~~------------------------------------------------------------------------ 145 (259)
T d1oaaa_ 138 LNAFQDSP------------------------------------------------------------------------ 145 (259)
T ss_dssp HHTSCCCT------------------------------------------------------------------------
T ss_pred HHHHHhcC------------------------------------------------------------------------
Confidence 88776521
Q ss_pred cccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCc
Q psy2266 159 TNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFS 238 (313)
Q Consensus 159 ~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
..+|+||++||.++..+ ..+..+
T Consensus 146 -----------------~~~g~Iv~isS~~~~~~----------------------------------------~~~~~~ 168 (259)
T d1oaaa_ 146 -----------------GLSKTVVNISSLCALQP----------------------------------------YKGWGL 168 (259)
T ss_dssp -----------------TCEEEEEEECCGGGTSC----------------------------------------CTTCHH
T ss_pred -----------------CCcccccccccccccCC----------------------------------------CccchH
Confidence 01267778888777551 233456
Q ss_pred hhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccC--CCCcchhhhhhhhhhcccCCcc
Q psy2266 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG--VLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 239 Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|++||+|+.+|+|.|+.| . +|||||+|+||+|+|+|.+... ...++..+......|++|.++.
T Consensus 169 Y~asKaal~~lt~~la~e--~----~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p 233 (259)
T d1oaaa_ 169 YCAGKAARDMLYQVLAAE--E----PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDC 233 (259)
T ss_dssp HHHHHHHHHHHHHHHHHH--C----TTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCH
T ss_pred HHHHHHHHHHHHHHHHhC--C----CCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCH
Confidence 999999999999999887 2 3999999999999999976431 2344444555566677777654
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.91 E-value=1.3e-24 Score=199.22 Aligned_cols=170 Identities=15% Similarity=0.051 Sum_probs=131.0
Q ss_pred cccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcc
Q psy2266 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL 82 (313)
Q Consensus 4 ~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m 82 (313)
.++.|.++.+++||++++++++++++.+.+++|+||+||||||+.....+...+ ++|++.+.+|+.+.+.+.++..+.+
T Consensus 70 ~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 149 (294)
T d1w6ua_ 70 SSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQL 149 (294)
T ss_dssp HHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCceEEEEecccChHHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhccc
Confidence 345678899999999999999999999999999999999999998877666665 8999999999999888888766654
Q ss_pred cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccc
Q psy2266 83 RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFF 162 (313)
Q Consensus 83 ~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~ 162 (313)
...
T Consensus 150 ~~~----------------------------------------------------------------------------- 152 (294)
T d1w6ua_ 150 IKA----------------------------------------------------------------------------- 152 (294)
T ss_dssp HHT-----------------------------------------------------------------------------
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 320
Q ss_pred cHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhh
Q psy2266 163 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVS 242 (313)
Q Consensus 163 g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 242 (313)
..++.|++++|..+.. ......+|++|
T Consensus 153 -------------~~~~~i~~~ss~~~~~----------------------------------------~~~~~~~Ysas 179 (294)
T d1w6ua_ 153 -------------QKGAAFLSITTIYAET----------------------------------------GSGFVVPSASA 179 (294)
T ss_dssp -------------TCCEEEEEECCTHHHH----------------------------------------CCTTCHHHHHH
T ss_pred -------------cccccccccccchhhh----------------------------------------cccccchHHHH
Confidence 1124455555555543 12233469999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 243 KLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 243 K~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
|+|+..|+|.++.+++++ |||||+|+||+|+|++........++..+......|++|+|+.
T Consensus 180 Kaal~~ltk~lA~ela~~----gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~p 240 (294)
T d1w6ua_ 180 KAGVEAMSKSLAAEWGKY----GMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTV 240 (294)
T ss_dssp HHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCH
T ss_pred HHHHHHHHHHHHHHHhHh----CeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCH
Confidence 999999999999999987 9999999999999999877544455566677788899999875
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=3.7e-24 Score=192.30 Aligned_cols=159 Identities=19% Similarity=0.174 Sum_probs=119.8
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
+.+..+|+.+++.+ +.+.+++++||+||||||+....++.+++ ++|++.+++|+.+++.++|++.|.|.+
T Consensus 52 ~~~~~~d~~~~~~~----~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~----- 122 (245)
T d2ag5a1 52 IQTRVLDVTKKKQI----DQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLA----- 122 (245)
T ss_dssp EEEEECCTTCHHHH----HHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----
T ss_pred Cceeeeeccccccc----cccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCccccc-----
Confidence 56778888876554 55566789999999999999887777766 899999988888888888888876644
Q ss_pred EEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHH
Q psy2266 90 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCH 169 (313)
Q Consensus 90 ~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 169 (313)
T Consensus 123 -------------------------------------------------------------------------------- 122 (245)
T d2ag5a1 123 -------------------------------------------------------------------------------- 122 (245)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHH
Q psy2266 170 ILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKL 249 (313)
Q Consensus 170 ~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l 249 (313)
++.|+|+++||..+.... .....+|+++|+|+++|
T Consensus 123 ------~~~g~Ii~isS~~~~~~~---------------------------------------~~~~~~Y~~sKaal~~l 157 (245)
T d2ag5a1 123 ------QKSGNIINMSSVASSVKG---------------------------------------VVNRCVYSTTKAAVIGL 157 (245)
T ss_dssp ------HTCEEEEEECCSBTTTBC---------------------------------------CTTBHHHHHHHHHHHHH
T ss_pred ------CCCceeeeeechhhccCC---------------------------------------ccchhHHHHHHHHHHHH
Confidence 123566666666553311 12334699999999999
Q ss_pred HHHHHhhhccCCCCCCeEEEeecccccccccccccC--CCC-cchhhhhhhhhhcccCCcc
Q psy2266 250 SFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG--VLT-PEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 250 ~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~--~~~-~~~~~~~~~~~~l~r~~~~ 307 (313)
+|.|++|++++ |||||+|+||+|+||+.+... ... ....+......|++|+++.
T Consensus 158 ~r~lA~e~~~~----gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p 214 (245)
T d2ag5a1 158 TKSVAADFIQQ----GIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATA 214 (245)
T ss_dssp HHHHHHHHGGG----TEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEH
T ss_pred HHHHHHHhhhh----CcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCH
Confidence 99999999987 999999999999999976531 122 2233555677899998865
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.90 E-value=2.8e-24 Score=200.72 Aligned_cols=80 Identities=13% Similarity=0.374 Sum_probs=64.4
Q ss_pred EeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEE
Q psy2266 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD--TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNV 91 (313)
Q Consensus 15 ~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~--~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~i 91 (313)
.+|+++.++++++++.+.++||+||+||||||+... .++.+++ ++|++++++|+++.+.++|++.|.|+++|+||++
T Consensus 91 ~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsIv~i 170 (329)
T d1uh5a_ 91 RYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISL 170 (329)
T ss_dssp HHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccccccccc
Confidence 357778889999999999999999999999998754 3566666 9999999888888888888777777666565555
Q ss_pred ecc
Q psy2266 92 ASK 94 (313)
Q Consensus 92 sS~ 94 (313)
+|.
T Consensus 171 ss~ 173 (329)
T d1uh5a_ 171 TYH 173 (329)
T ss_dssp ECG
T ss_pred eee
Confidence 543
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.89 E-value=5.5e-23 Score=186.28 Aligned_cols=169 Identities=16% Similarity=0.083 Sum_probs=113.0
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEE
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVV 89 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV 89 (313)
+..+.+|++++++++++++.+.++||+||+||||||+....++.+++ ++|+......-
T Consensus 72 ~~~~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~--------------------- 130 (284)
T d1e7wa_ 72 GADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDRE--------------------- 130 (284)
T ss_dssp ----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------H---------------------
T ss_pred cccccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHH---------------------
Confidence 44456779999999999999999999999999999998877766665 55543210000
Q ss_pred EEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHH
Q psy2266 90 NVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCH 169 (313)
Q Consensus 90 ~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 169 (313)
.....|...|.+|+.+++++++
T Consensus 131 ----------------------------------------------------------~~~~~~~~~~~~n~~~~~~~~~ 152 (284)
T d1e7wa_ 131 ----------------------------------------------------------AMETATADLFGSNAIAPYFLIK 152 (284)
T ss_dssp ----------------------------------------------------------HHHHHHHHHHHHHTHHHHHHHH
T ss_pred ----------------------------------------------------------HHHHHHHHHHhhheeeeeeeec
Confidence 0012344455666666666666
Q ss_pred HHhhc------ccC--CCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhh
Q psy2266 170 ILFPL------LRP--HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSV 241 (313)
Q Consensus 170 ~~~p~------l~~--~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 241 (313)
.+.+. +++ +++|++++|..+.. +..+..+|++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~----------------------------------------~~~~~~~Y~a 192 (284)
T d1e7wa_ 153 AFAHRVAGTPAKHRGTNYSIINMVDAMTNQ----------------------------------------PLLGYTIYTM 192 (284)
T ss_dssp HHHHHHHTSCGGGSCSCEEEEEECCTTTTS----------------------------------------CCTTCHHHHH
T ss_pred cccchhhhhHHHhcCCCCcccccccccccC----------------------------------------Cccceeeecc
Confidence 55443 333 26788888887754 2334456999
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhc-ccCCcc
Q psy2266 242 SKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLL-KRTNKF 307 (313)
Q Consensus 242 sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l-~r~~~~ 307 (313)
||+|+..|+|.++++++++ |||||+|+||++.|. .. .+++..+......|+ +|+|+.
T Consensus 193 sKaal~~lt~~lA~el~~~----gIrvN~I~PG~t~~~--~~---~~~~~~~~~~~~~pl~~R~~~p 250 (284)
T d1e7wa_ 193 AKGALEGLTRSAALELAPL----QIRVNGVGPGLSVLV--DD---MPPAVWEGHRSKVPLYQRDSSA 250 (284)
T ss_dssp HHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBCCG--GG---SCHHHHHHHHTTCTTTTSCBCH
T ss_pred ccccchhhhHHHHHHhCCc----ccccccccccccccc--cc---CCHHHHHHHHhcCCCCCCCCCH
Confidence 9999999999999999887 999999999985543 22 345555666666775 888764
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=9.1e-23 Score=182.36 Aligned_cols=171 Identities=18% Similarity=0.189 Sum_probs=130.4
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC------CCCChh-HHHHHHHhHHHHHHHHHH
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT------APGSFG-QRAETTLATNFFALVTVC 75 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~------~~~~~~-~~~~~~~~vNl~~~i~l~ 75 (313)
+.++++.+.....+|+.+.+++++.++.+...++.+|++++|+++.... +..+.+ ++|++++++|+.++++++
T Consensus 45 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~ 124 (248)
T d2o23a1 45 QAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVI 124 (248)
T ss_dssp HHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHhCCCcccccccccccccccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHH
Confidence 3456677889999999999999999999999999999999999886543 223333 889999999999999999
Q ss_pred HHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhh
Q psy2266 76 HILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAET 155 (313)
Q Consensus 76 ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~ 155 (313)
|++.|.|...
T Consensus 125 ~~~~~~~~~~---------------------------------------------------------------------- 134 (248)
T d2o23a1 125 RLVAGEMGQN---------------------------------------------------------------------- 134 (248)
T ss_dssp HHHHHHHTTS----------------------------------------------------------------------
T ss_pred HHhHHHHHHh----------------------------------------------------------------------
Confidence 9999887652
Q ss_pred hhhcccccHHHHHHHHhhccc--CCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCC
Q psy2266 156 TLATNFFALVTVCHILFPLLR--PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAG 233 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p~l~--~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (313)
+.++ ++|+||++||..+.. +.
T Consensus 135 -----------------~~~~~~~~G~Ii~isS~~~~~----------------------------------------~~ 157 (248)
T d2o23a1 135 -----------------EPDQGGQRGVIINTASVAAFE----------------------------------------GQ 157 (248)
T ss_dssp -----------------CCCTTSCCEEEEEECCTHHHH----------------------------------------CC
T ss_pred -----------------hhhccCCceEEEEecchhhcc----------------------------------------CC
Confidence 1111 348899999999865 23
Q ss_pred CCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhc-ccCCcc
Q psy2266 234 WPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLL-KRTNKF 307 (313)
Q Consensus 234 ~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l-~r~~~~ 307 (313)
++..+|++||+|+.+|+|.+++|++++ |||||+|+||+|+|+|.... .++..+......|+ +|+|+.
T Consensus 158 ~~~~~Y~asKaal~~lt~~la~e~~~~----gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~pl~~R~g~p 225 (248)
T d2o23a1 158 VGQAAYSASKGGIVGMTLPIARDLAPI----GIRVMTIAPGLFGTPLLTSL---PEKVCNFLASQVPFPSRLGDP 225 (248)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEECCBCCC-------------CHHHHTCSSSCSCBCH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhccc----CcceeeeccCceecchhhcC---CHHHHHHHHhcCCCCCCCcCH
Confidence 344569999999999999999999877 99999999999999997764 33444455566776 888864
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=5.1e-23 Score=186.82 Aligned_cols=144 Identities=17% Similarity=0.194 Sum_probs=115.3
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccC
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRP 84 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~ 84 (313)
..+..+..+.+|+++.+++..+++.+.+.+|.+|++|||||+.....+.+.+ ++|++++++|+.+++.++|++.|.|++
T Consensus 61 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~ 140 (269)
T d1xu9a_ 61 LGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ 140 (269)
T ss_dssp HTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHh
Confidence 4567788899999999999999999999999999999999998877666665 888888877777777777766666543
Q ss_pred CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccH
Q psy2266 85 HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFAL 164 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~ 164 (313)
T Consensus 141 -------------------------------------------------------------------------------- 140 (269)
T d1xu9a_ 141 -------------------------------------------------------------------------------- 140 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHH
Q psy2266 165 VTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKL 244 (313)
Q Consensus 165 ~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 244 (313)
++|+||++||.++.. +.+...+|++||+
T Consensus 141 ------------~~G~ii~isS~~~~~----------------------------------------~~p~~~~Y~asKa 168 (269)
T d1xu9a_ 141 ------------SNGSIVVVSSLAGKV----------------------------------------AYPMVAAYSASKF 168 (269)
T ss_dssp ------------HTCEEEEEEEGGGTS----------------------------------------CCTTCHHHHHHHH
T ss_pred ------------cCCcceEeccchhcC----------------------------------------CCCCchHHHHHHH
Confidence 135666666666654 1233456999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 245 GVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 245 al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
|+.+|++.|+.|++.+ +.||+||+|+||+|+|||.++
T Consensus 169 al~~~~~~La~El~~~--~~~I~V~~v~PG~v~T~~~~~ 205 (269)
T d1xu9a_ 169 ALDGFFSSIRKEYSVS--RVNVSITLCVLGLIDTETAMK 205 (269)
T ss_dssp HHHHHHHHHHHHHHHH--TCCCEEEEEEECCBCCHHHHH
T ss_pred HHHHHHHHHHHHhhhc--CCCEEEEEEecCcCCCcHHHH
Confidence 9999999999999754 458999999999999998654
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.86 E-value=3e-22 Score=178.38 Aligned_cols=84 Identities=8% Similarity=0.081 Sum_probs=62.8
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcC--CCcEEEECCCCCCC-CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCC
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHG--GLDLLVNNAGIYRD-TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH 85 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g--~iDilVnNAGi~~~-~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~ 85 (313)
....+.+|.++.++++.+.+.+.+.++ +||+||||||.... ...++.+ ++|++++++|+.+++.++|++.|.|+++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~ 121 (236)
T d1dhra_ 42 ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG 121 (236)
T ss_dssp EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred ccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc
Confidence 345567888888899998888877654 79999999997544 3556665 8899999888888888887777766555
Q ss_pred ceEEEEec
Q psy2266 86 ARVVNVAS 93 (313)
Q Consensus 86 g~IV~isS 93 (313)
|+||+++|
T Consensus 122 G~Iv~isS 129 (236)
T d1dhra_ 122 GLLTLAGA 129 (236)
T ss_dssp EEEEEECC
T ss_pred cceeEEcc
Confidence 44444444
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.86 E-value=5.2e-22 Score=176.46 Aligned_cols=161 Identities=13% Similarity=0.097 Sum_probs=118.4
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHH--HcCCccEEEeccCcCCCCC-c--
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQ--YNGPLDKILDTAMDTAPGS-F-- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~--~~G~lD~Linna~~~~~~~-~-- 149 (313)
++++..+ ++|.+|+.++........ . .....++..+.+......+.+.+ ++|++|+||||||....+. +
T Consensus 16 ~aia~~l~~~G~~V~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~ 90 (235)
T d1ooea_ 16 SAILEFFKKNGYTVLNIDLSANDQAD---S--NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSK 90 (235)
T ss_dssp HHHHHHHHHTTEEEEEEESSCCTTSS---E--EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTST
T ss_pred HHHHHHHHHCCCEEEEEECCchhccc---c--cceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCccccccccccc
Confidence 4444444 457788877654432211 1 11123344444455555555444 4699999999999865543 2
Q ss_pred --chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhc
Q psy2266 150 --GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEG 227 (313)
Q Consensus 150 --~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (313)
.+.|+.++++|++|++.++++++|+|+++|+|+++||..+..
T Consensus 91 ~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~------------------------------------ 134 (235)
T d1ooea_ 91 DFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG------------------------------------ 134 (235)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------------------------------------
T ss_pred CcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcC------------------------------------
Confidence 367899999999999999999999999999999999998876
Q ss_pred ccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 228 KDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 228 ~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
+.....+|++||+|+..|+++++.|++.. +.+|+||+|+||+++|+|.+.
T Consensus 135 ----~~~~~~~Y~asKaal~~l~~~la~e~~~~--~~~i~v~~i~Pg~~~T~~~~~ 184 (235)
T d1ooea_ 135 ----PTPSMIGYGMAKAAVHHLTSSLAAKDSGL--PDNSAVLTIMPVTLDTPMNRK 184 (235)
T ss_dssp ----CCTTBHHHHHHHHHHHHHHHHHHSTTSSC--CTTCEEEEEEESCBCCHHHHH
T ss_pred ----CcccccchHHHHHHHHHHHHHHHHHhccC--CCceEEEEEecCcCcCcchhh
Confidence 23344679999999999999998888732 448999999999999998765
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.85 E-value=8.7e-22 Score=179.54 Aligned_cols=154 Identities=10% Similarity=0.083 Sum_probs=118.1
Q ss_pred cCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CCCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEecc
Q psy2266 18 ILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD--TAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNVASK 94 (313)
Q Consensus 18 vs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~--~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS~ 94 (313)
.++..+++++++.+.++||+||+||||||+... .++.+++ ++|++++++|+++++.++|++.+.|+++++++.+++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~ 179 (297)
T d1d7oa_ 100 GSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYI 179 (297)
T ss_dssp HCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECG
T ss_pred hccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcCCcceeeeeh
Confidence 356667899999999999999999999998643 3566666 9999999999999999999888877776555544442
Q ss_pred cccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhc
Q psy2266 95 LGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPL 174 (313)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~ 174 (313)
.
T Consensus 180 ~------------------------------------------------------------------------------- 180 (297)
T d1d7oa_ 180 A------------------------------------------------------------------------------- 180 (297)
T ss_dssp G-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 2
Q ss_pred ccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHH
Q psy2266 175 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQH 254 (313)
Q Consensus 175 l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~ 254 (313)
+.... ......|+++|+++..+++.++
T Consensus 181 --------------~~~~~---------------------------------------~~~~~~y~~aKaa~~~l~~~~a 207 (297)
T d1d7oa_ 181 --------------SERII---------------------------------------PGYGGGMSSAKAALESDTRVLA 207 (297)
T ss_dssp --------------GTSCC---------------------------------------TTCTTTHHHHHHHHHHHHHHHH
T ss_pred --------------hcccc---------------------------------------cccccceecccccccccccccc
Confidence 22110 1233469999999999999999
Q ss_pred hhhc-cCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCccc
Q psy2266 255 ATLS-KDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKFQ 308 (313)
Q Consensus 255 ~~l~-~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~~ 308 (313)
.++. ++ |||||+|+||+|+|++.+.. ...++..+......|++|+++..
T Consensus 208 ~e~~~~~----gIrvN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~PlgR~~~pe 257 (297)
T d1d7oa_ 208 FEAGRKQ----NIRVNTISAGPLGSRAAKAI-GFIDTMIEYSYNNAPIQKTLTAD 257 (297)
T ss_dssp HHHHHHH----CCEEEEEEECCCBCCCSSCC-SHHHHHHHHHHHHSSSCCCBCHH
T ss_pred hhccccc----eEEecccccccccchhhhhc-cCCHHHHHHHHhCCCCCCCCCHH
Confidence 9986 45 99999999999999997753 12234445667778999988753
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.84 E-value=1.1e-21 Score=175.65 Aligned_cols=168 Identities=10% Similarity=0.038 Sum_probs=123.5
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
.+....+++|+++..++..+++.+.+.++++|++||||++.....+.... ++..
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~--~~~~------------------------ 107 (258)
T d1qsga_ 54 LGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDY--VNAV------------------------ 107 (258)
T ss_dssp TTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCH--HHHC------------------------
T ss_pred cCCcceeecccchHHHHHHHHHHhhhcccccceEEEeecccccccccccc--cccc------------------------
Confidence 44567888999999999999999999999999999999987644222111 0000
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHH
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTV 167 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~ 167 (313)
..+.|...+.+|+.+.+.+
T Consensus 108 -------------------------------------------------------------~~~~~~~~~~~~~~~~~~~ 126 (258)
T d1qsga_ 108 -------------------------------------------------------------TREGFKIAHDISSYSFVAM 126 (258)
T ss_dssp -------------------------------------------------------------CHHHHHHHHHHHTHHHHHH
T ss_pred -------------------------------------------------------------hHHHHHHHHHHHHHHHHHH
Confidence 0133455556666666667
Q ss_pred HHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHH
Q psy2266 168 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVA 247 (313)
Q Consensus 168 ~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~ 247 (313)
++.+.|.|++++.|+++||..+... .+....|++||+|+.
T Consensus 127 ~~~~~~~~~~~~~Ii~iss~~~~~~----------------------------------------~~~~~~Y~~sKaal~ 166 (258)
T d1qsga_ 127 AKACRSMLNPGSALLTLSYLGAERA----------------------------------------IPNYNVMGLAKASLE 166 (258)
T ss_dssp HHHHGGGEEEEEEEEEEECGGGTSB----------------------------------------CTTTTHHHHHHHHHH
T ss_pred HHHHHHhccCCcEEEEecchhhccC----------------------------------------CCCcHHHHHHHHHHH
Confidence 7777777777677888888776541 223356999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 248 KLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 248 ~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
.|+|.++++++++ |||||+|+||+|+|++.... .......+......|++|+++.
T Consensus 167 ~ltr~lA~el~~~----gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~pl~R~~~p 221 (258)
T d1qsga_ 167 ANVRYMANAMGPE----GVRVNAISAGPIRTLAASGI-KDFRKMLAHCEAVTPIRRTVTI 221 (258)
T ss_dssp HHHHHHHHHHTTT----TEEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHSTTSSCCCH
T ss_pred HHHHHHHHHhCcc----Cceeeccccccccccccccc-chhhhHHHHHHhCCCCCCCcCH
Confidence 9999999998876 99999999999999997764 2333444555677899999875
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.80 E-value=2.2e-19 Score=160.58 Aligned_cols=170 Identities=17% Similarity=0.113 Sum_probs=109.2
Q ss_pred cCCCceeEEEeecCC----HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 6 NNNNNVRFHQLDILD----QSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~----~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
..+.+....++|+.+ ++.++++++.+.++||+||+||||||+.....+.+.. ..+....+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~--------------- 113 (266)
T d1mxha_ 49 ARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAK--------------- 113 (266)
T ss_dssp HSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC--------------------------
T ss_pred hcCCceEEEecccccchhHHHHHHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhccc---------------
Confidence 345667777766643 5668888899999999999999999998765443321 11110000
Q ss_pred cccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcc
Q psy2266 81 LLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATN 160 (313)
Q Consensus 81 ~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N 160 (313)
...+.+...+.+|
T Consensus 114 -------------------------------------------------------------------~~~~~~~~~~~~~ 126 (266)
T d1mxha_ 114 -------------------------------------------------------------------PIDAQVAELFGSN 126 (266)
T ss_dssp -------------------------------------------------------------------CHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------------ccccccccccccc
Confidence 0012233344444
Q ss_pred cccHHHHHHHHhhccc-------CCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCC
Q psy2266 161 FFALVTVCHILFPLLR-------PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAG 233 (313)
Q Consensus 161 ~~g~~~~~~~~~p~l~-------~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (313)
..+.+...+...+.+. ..+.+++++|..+.. ..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~ 166 (266)
T d1mxha_ 127 AVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDL----------------------------------------PL 166 (266)
T ss_dssp THHHHHHHHHHHHTC-------CCCEEEEEECCGGGGS----------------------------------------CC
T ss_pred cccccchhhhhccccccccccccccccchhhhhccccc----------------------------------------cC
Confidence 4444444444444442 135678888877754 12
Q ss_pred CCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccC-Cc
Q psy2266 234 WPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRT-NK 306 (313)
Q Consensus 234 ~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~-~~ 306 (313)
.+...|++||+|++.|+|.++++++++ |||||+|+||+|+|++.. +.+..+......|++|. |+
T Consensus 167 ~~~~~Y~asKaal~~lt~~lA~e~~~~----gIrVN~I~PG~i~t~~~~-----~~~~~~~~~~~~pl~r~~~~ 231 (266)
T d1mxha_ 167 PGFCVYTMAKHALGGLTRAAALELAPR----HIRVNAVAPGLSLLPPAM-----PQETQEEYRRKVPLGQSEAS 231 (266)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGG----TEEEEEEEESSBSCCSSS-----CHHHHHHHHTTCTTTSCCBC
T ss_pred cchhhhhhhHHHHhhhHHHHHHHhCcc----CcEEEEeccCcEeccccC-----CHHHHHHHHhcCCCCCCCCC
Confidence 344569999999999999999999977 999999999999998643 23444555666677553 54
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.79 E-value=2.2e-19 Score=158.29 Aligned_cols=167 Identities=19% Similarity=0.191 Sum_probs=123.9
Q ss_pred CCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC----CCCChh-HHHHHHHhHHHHHHHHHHHHHHhc
Q psy2266 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT----APGSFG-QRAETTLATNFFALVTVCHILFPL 81 (313)
Q Consensus 7 ~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~----~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~ 81 (313)
.+.+....++|+++...+..+.......+. .|.+++++|+.... ...... +.|++++++|+.+.+.+++.+.+.
T Consensus 36 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 114 (241)
T d1uaya_ 36 EGEDLIYVEGDVTREEDVRRAVARAQEEAP-LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWA 114 (241)
T ss_dssp CSSSSEEEECCTTCHHHHHHHHHHHHHHSC-EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccccceEeeccccchhhhHHHHHhhhcccc-ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 345677889999999999999888877654 56666677665432 222233 888999999999999999988886
Q ss_pred ccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhccc
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNF 161 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~ 161 (313)
+...
T Consensus 115 ~~~~---------------------------------------------------------------------------- 118 (241)
T d1uaya_ 115 MREN---------------------------------------------------------------------------- 118 (241)
T ss_dssp HTTC----------------------------------------------------------------------------
T ss_pred hhhh----------------------------------------------------------------------------
Confidence 6441
Q ss_pred ccHHHHHHHHhhccc-CCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchh
Q psy2266 162 FALVTVCHILFPLLR-PHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYS 240 (313)
Q Consensus 162 ~g~~~~~~~~~p~l~-~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 240 (313)
.|+++ ++|+||++||..+... ..+..+|+
T Consensus 119 ----------~~~~~~~~G~Ii~isS~~~~~~----------------------------------------~~~~~~Y~ 148 (241)
T d1uaya_ 119 ----------PPDAEGQRGVIVNTASVAAFEG----------------------------------------QIGQAAYA 148 (241)
T ss_dssp ----------CCCTTSCSEEEEEECCTHHHHC----------------------------------------CTTCHHHH
T ss_pred ----------hhhcccCceeeeeecchhhccC----------------------------------------CCCchhhH
Confidence 11222 2489999999988762 33445699
Q ss_pred hhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhc-ccCCcc
Q psy2266 241 VSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLL-KRTNKF 307 (313)
Q Consensus 241 ~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l-~r~~~~ 307 (313)
+||+|+..|+|.++.|++++ |||||+|+||+|+|++.... ..+..+......|+ +|+|+.
T Consensus 149 asKaal~~lt~~lA~ela~~----gIrVN~V~PG~i~T~~~~~~---~~~~~~~~~~~~~~~~R~g~p 209 (241)
T d1uaya_ 149 ASKGGVVALTLPAARELAGW----GIRVVTVAPGLFDTPLLQGL---PEKAKASLAAQVPFPPRLGRP 209 (241)
T ss_dssp HHHHHHHHHHHHHHHHHGGG----TEEEEEEEECSCSSHHHHTS---CHHHHHHHHTTCCSSCSCCCH
T ss_pred HHHHHHHHHHHHHHHHHhhc----CCceeeecCCcccccccchh---hhhHHHHHHhcCCCCCCCcCH
Confidence 99999999999999999987 99999999999999998763 33444444445554 888764
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.78 E-value=6.7e-19 Score=158.67 Aligned_cols=164 Identities=18% Similarity=0.166 Sum_probs=114.6
Q ss_pred cCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC-CCChh----HHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 6 NNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA-PGSFG----QRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 6 ~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~-~~~~~----~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
+.+..+.++++|++++++++++++.+.+.+|++|+||||+|+..... ..+.. ..+...+.++.++.+.+.+...+
T Consensus 52 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (274)
T d2pd4a1 52 QELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKP 131 (274)
T ss_dssp HHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred hhCCceeEeeecccchhhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccc
Confidence 34667788999999999999999999999999999999999876542 22332 44444444444444444444444
Q ss_pred cccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcc
Q psy2266 81 LLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATN 160 (313)
Q Consensus 81 ~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N 160 (313)
.++.
T Consensus 132 ~~~~---------------------------------------------------------------------------- 135 (274)
T d2pd4a1 132 LLNN---------------------------------------------------------------------------- 135 (274)
T ss_dssp GEEE----------------------------------------------------------------------------
T ss_pred cccc----------------------------------------------------------------------------
Confidence 3333
Q ss_pred cccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchh
Q psy2266 161 FFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYS 240 (313)
Q Consensus 161 ~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 240 (313)
++.|+++++..... .......|+
T Consensus 136 -----------------~~~i~~~s~~~~~~----------------------------------------~~~~~~~y~ 158 (274)
T d2pd4a1 136 -----------------GASVLTLSYLGSTK----------------------------------------YMAHYNVMG 158 (274)
T ss_dssp -----------------EEEEEEEECGGGTS----------------------------------------BCTTCHHHH
T ss_pred -----------------Ccceeeeccccccc----------------------------------------ccccchhhh
Confidence 33344444444322 122334599
Q ss_pred hhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhhhhhhhhcccCCcc
Q psy2266 241 VSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIRQKIYLLKRTNKF 307 (313)
Q Consensus 241 ~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~l~r~~~~ 307 (313)
++|+|+.+++|.++.+++++ |||||+|+||+++|++..... ..++.........|++|+++.
T Consensus 159 asK~al~~ltr~lA~e~~~~----GIrvN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~~r~~~p 220 (274)
T d2pd4a1 159 LAKAALESAVRYLAVDLGKH----HIRVNALSAGPIRTLASSGIA-DFRMILKWNEINAPLRKNVSL 220 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCCCCTTGGGST-THHHHHHHHHHHSTTSSCCCH
T ss_pred HHHHHHHHHHHhhHHHhcCc----CceecccccCcccCccccccC-chHHHHHHHhhhhhccCCcCH
Confidence 99999999999999998877 999999999999999977641 123333445567788888765
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.78 E-value=4.2e-19 Score=159.21 Aligned_cols=83 Identities=13% Similarity=0.254 Sum_probs=65.3
Q ss_pred ccccCCCceeEEEeecCCHHHHHHHHHHHHHHc---CCCcEEEECCCCCCCC-----CCCChh-HHHHHHHhHHHHHHHH
Q psy2266 3 VCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQH---GGLDLLVNNAGIYRDT-----APGSFG-QRAETTLATNFFALVT 73 (313)
Q Consensus 3 ~~~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~---g~iDilVnNAGi~~~~-----~~~~~~-~~~~~~~~vNl~~~i~ 73 (313)
+.++.+.+...++||++++++++++++.+.+.+ ++||++|||||+.... ++.+.+ ++|.+.+++|+.+++.
T Consensus 49 ~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (268)
T d2h7ma1 49 ITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYAS 128 (268)
T ss_dssp HHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred HHHHcCCceeeEeeecccccccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHH
Confidence 345678889999999999999999999998775 6799999999987532 233344 8889999888888888
Q ss_pred HHHHHHhcccCC
Q psy2266 74 VCHILFPLLRPH 85 (313)
Q Consensus 74 l~ra~~~~m~~~ 85 (313)
+.+++.+.+..+
T Consensus 129 ~~~~~~~~~~~~ 140 (268)
T d2h7ma1 129 MAKALLPIMNPG 140 (268)
T ss_dssp HHHHHGGGEEEE
T ss_pred HHHHHhhhcccc
Confidence 777766655443
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.74 E-value=9.4e-20 Score=162.37 Aligned_cols=175 Identities=17% Similarity=0.182 Sum_probs=112.0
Q ss_pred EeecCCHHHHHHHHHHHHHH-cCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccC--CceEEEE
Q psy2266 15 QLDILDQSSIHKLHDDIQTQ-HGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP--HARVVNV 91 (313)
Q Consensus 15 ~~Dvs~~~~v~~~~~~v~~~-~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~--~g~IV~i 91 (313)
.+|+.+++..+..+..+..+ .+++|++|||||+.... +.|.....+|+.+...+.+...+.+.+ ...+.++
T Consensus 39 ~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
T d1fjha_ 39 IADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVI 112 (257)
T ss_dssp ECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTC------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEE
T ss_pred HHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCcH------HHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceee
Confidence 46888888888776666544 46899999999986533 456778899999999999999988865 3444444
Q ss_pred ecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHH
Q psy2266 92 ASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHIL 171 (313)
Q Consensus 92 sS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 171 (313)
.+.... .+.+..
T Consensus 113 ~~~~~~--------------------------------------------------------------------~~~~~~ 124 (257)
T d1fjha_ 113 SSVASA--------------------------------------------------------------------HLAFDK 124 (257)
T ss_dssp CCGGGG--------------------------------------------------------------------SSCGGG
T ss_pred eecccc--------------------------------------------------------------------chhhhh
Confidence 443222 111222
Q ss_pred hhcc--cCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHH
Q psy2266 172 FPLL--RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKL 249 (313)
Q Consensus 172 ~p~l--~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l 249 (313)
.|.+ .++|++++++|..+.... ..+..+|++||+|+..|
T Consensus 125 ~~~~~~~~~g~~~~i~s~~~~~~~---------------------------------------~~~~~~Y~asKaal~~l 165 (257)
T d1fjha_ 125 NPLALALEAGEEAKARAIVEHAGE---------------------------------------QGGNLAYAGSKNALTVA 165 (257)
T ss_dssp CTTHHHHHHTCHHHHHHHHHTCCT---------------------------------------THHHHHHHHHHHHHHHH
T ss_pred hhhhhhccCCcEEEEeeehhccCC---------------------------------------CcchHHHHHHhhhhhcc
Confidence 2322 345888888887765411 11123599999999999
Q ss_pred HHHHHhhhccCCCCCCeEEEeecccccccccccccCCCCcchhhh-hhhhhhcccCCcc
Q psy2266 250 SFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKI-RQKIYLLKRTNKF 307 (313)
Q Consensus 250 ~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~l~r~~~~ 307 (313)
+|.++.+|+++ |||||+|+||+|+||+.+.... .++..+. .....|++|+|+.
T Consensus 166 tr~lA~el~~~----gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~~~PlgR~g~p 219 (257)
T d1fjha_ 166 VRKRAAAWGEA----GVRLNTIAPGATETPLLQAGLQ-DPRYGESIAKFVPPMGRRAEP 219 (257)
T ss_dssp HHHTHHHHHHT----TCEEEEEEECC----------------------CCCSTTSCCCT
T ss_pred ccccccccccc----cccccccccCCcCChhHHhhcC-CHHHHHHHHhcCCCCCCCcCH
Confidence 99999999987 9999999999999999876422 2222222 3334699999875
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.68 E-value=2.4e-17 Score=147.49 Aligned_cols=73 Identities=14% Similarity=0.185 Sum_probs=62.3
Q ss_pred ccCCCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChh-HHHHHHHhHHHHHHHHHHHHH
Q psy2266 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHIL 78 (313)
Q Consensus 5 ~~~g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~-~~~~~~~~vNl~~~i~l~ra~ 78 (313)
++.|.++.++.||++|.++++++++.+.+ ++++|++|||||+....++.+++ ++|+.++++|+.+++.+.+++
T Consensus 58 ~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~-~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~ 131 (259)
T d2fr1a1 58 EALGARTTVAACDVTDRESVRELLGGIGD-DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT 131 (259)
T ss_dssp HHTTCEEEEEECCTTCHHHHHHHHHTSCT-TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HhccccccccccccchHHHHHHhhccccc-cccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh
Confidence 45688899999999999999999998865 46899999999999888777766 888888888888888777653
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.31 E-value=2.3e-12 Score=113.26 Aligned_cols=123 Identities=9% Similarity=0.060 Sum_probs=96.9
Q ss_pred eEEEeecCCHHHHHHHHHHHHH--HcCCCcEEEECCCCCCCC-CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 12 RFHQLDILDQSSIHKLHDDIQT--QHGGLDLLVNNAGIYRDT-APGSFG-QRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 12 ~~~~~Dvs~~~~v~~~~~~v~~--~~g~iDilVnNAGi~~~~-~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
....+|+.+.++.....+.+.. ++|+||+||||||+.... +..+.. +.|+.++++|+++++.++|++.|.|+++|+
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~ 123 (235)
T d1ooea_ 44 ILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGL 123 (235)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred ceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceE
Confidence 4456777777777777777766 468999999999986543 444444 899999999999999999999999999999
Q ss_pred EEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcC--CccEEEecc
Q psy2266 88 VVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNG--PLDKILDTA 141 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G--~lD~Linna 141 (313)
||+++|..+...... ...+...+.++..+++.+...++ +..+.+|+.
T Consensus 124 Iv~isS~~~~~~~~~-------~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i 172 (235)
T d1ooea_ 124 LQLTGAAAAMGPTPS-------MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTI 172 (235)
T ss_dssp EEEECCGGGGSCCTT-------BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEE
T ss_pred EEEeccHHhcCCccc-------ccchHHHHHHHHHHHHHHHHHhccCCCceEEEEE
Confidence 999999887664432 23345678889999999998887 467777764
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.20 E-value=1.2e-11 Score=110.26 Aligned_cols=110 Identities=14% Similarity=0.019 Sum_probs=84.1
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+...+......+.....+. ..+.+|..++++++++++.+.+++|++|+||||||....++
T Consensus 20 ~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilinnag~~~~~~ 99 (259)
T d1ja9a_ 20 RGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCD 99 (259)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCC
T ss_pred HHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcEEEeccccccccc
Confidence 3444444 5677888765443332221122221 22567888999999999999999999999999999988888
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhhcccCCCceEEec
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 185 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vs 185 (313)
+. +.|+.++++|+.+++.+++.++|.|+++|++++++
T Consensus 100 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~ 140 (259)
T d1ja9a_ 100 ELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS 140 (259)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccc
Confidence 64 78999999999999999999999999888877754
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.14 E-value=2.9e-11 Score=106.88 Aligned_cols=105 Identities=15% Similarity=0.171 Sum_probs=78.5
Q ss_pred HHHHHHhcccCCceEEEEecccccccCCCc---hhhh-hhhcccCCCHHHHHHHHHHHH--HHcCCccEEEeccCcCCCC
Q psy2266 74 VCHILFPLLRPHARVVNVASKLGMLYNVPS---QELR-QTLFNESLTEDQLLDMMTDYV--QYNGPLDKILDTAMDTAPG 147 (313)
Q Consensus 74 l~ra~~~~m~~~g~IV~isS~~~~~~~~~~---~~~~-~~~~~d~~~~~~~~~~~~~~~--~~~G~lD~Linna~~~~~~ 147 (313)
+.|.++.+.+++..|+..++....+.+... ...+ ..+.+|..++++++++++.+. .++|++|+||||||.....
T Consensus 18 ~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~ 97 (248)
T d1snya_ 18 LVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKS 97 (248)
T ss_dssp HHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCC
T ss_pred HHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcCCcceEEeeccccccC
Confidence 455555556678888888876655433211 0011 125678889999999999884 4789999999999986554
Q ss_pred C-c----chhhhhhhhcccccHHHHHHHHhhcccCC
Q psy2266 148 S-F----GQRAETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 148 ~-~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
+ + .++|+.++++|+.|++.+++.++|+|++.
T Consensus 98 ~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~ 133 (248)
T d1snya_ 98 ARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKA 133 (248)
T ss_dssp CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred cccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHh
Confidence 3 3 25799999999999999999999999764
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.09 E-value=1.4e-10 Score=103.79 Aligned_cols=109 Identities=12% Similarity=0.091 Sum_probs=84.0
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhh------hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQ------TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~------~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+.+......+...+.+.. ...+|..++++++++++.+.+.+|++|+++||||.....+
T Consensus 32 ~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~~~~ 111 (272)
T d1g0oa_ 32 REMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGH 111 (272)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCccccccccchhhh
Confidence 4444444 55778877765433221111222221 1356888999999999999999999999999999988887
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhhcccCCCceEEe
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFPLLRPHARVVNV 184 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~v 184 (313)
+. ++|+.++++|+.|++.++++++|.|+++|+++++
T Consensus 112 ~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i 151 (272)
T d1g0oa_ 112 VKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 151 (272)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred hhhhhhhHHHHHhhhccceeeeeccccccccccccccccc
Confidence 64 7899999999999999999999999999998875
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.08 E-value=4.9e-11 Score=106.34 Aligned_cols=116 Identities=11% Similarity=0.099 Sum_probs=89.3
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.++.....+.+...+... ..+.+|..++++++++++.+.+++|++|+||||||....++
T Consensus 23 ~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~ 102 (260)
T d1h5qa_ 23 LAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKP 102 (260)
T ss_dssp HHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcEecccccccccCC
Confidence 4444444 5677888887766554433222111 12567888999999999999999999999999999988888
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhhcccC---CCceEEecCCcccc
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFPLLRP---HARVVNVASKLGML 191 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~---~g~iv~vss~~~~~ 191 (313)
+. ++|+.++++|+.|++++++.++|.|.+ +|+|++++|..+..
T Consensus 103 ~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~ 152 (260)
T d1h5qa_ 103 ATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQI 152 (260)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS
T ss_pred HHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccc
Confidence 74 789999999999999999999998832 36788888877653
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.02 E-value=1.7e-10 Score=102.61 Aligned_cols=114 Identities=10% Similarity=0.043 Sum_probs=88.7
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++....+.+. .+++. ..+.+|..++++++++++.+.++||++|+||||||....++
T Consensus 15 ~aia~~la~~Ga~V~~~~r~~~~l~~~-~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~ 93 (255)
T d1gega_ 15 KAIALRLVKDGFAVAIADYNDATAKAV-ASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTP 93 (255)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHH-HHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEecccccccCc
Confidence 4444444 5678888887765444332 12222 12467888999999999999999999999999999988888
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccc
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM 190 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~ 190 (313)
+. ++|++++++|+.|+++++++++|.|+++++-..+-...+.
T Consensus 94 ~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~ 139 (255)
T d1gega_ 94 IESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQ 139 (255)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred HHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccch
Confidence 74 7899999999999999999999999988877666555543
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.01 E-value=6.4e-11 Score=105.00 Aligned_cols=102 Identities=16% Similarity=0.120 Sum_probs=72.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhh-----hhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC--
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQEL-----RQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG-- 147 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~-----~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~-- 147 (313)
++++..+ ++|.+|+...+........ .... ...+.+|..++++++++++.+.+++|++|+||||||.....
T Consensus 24 ~aiA~~la~~Ga~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~ 102 (256)
T d1ulua_ 24 FAIAAKLKEAGAEVALSYQAERLRPEA-EKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAM 102 (256)
T ss_dssp HHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHH
T ss_pred HHHHHHHHHCCCEEEEEeCcHHHHHHH-HHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCceEEEecccccccccc
Confidence 3444444 5677877655432221111 1111 11246788899999999999999999999999999985432
Q ss_pred --Cc----chhhhhhhhcccccHHHHHHHHhhcccCC
Q psy2266 148 --SF----GQRAETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 148 --~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
++ .++|+.++++|+.+++.++++++|+|+++
T Consensus 103 ~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~ 139 (256)
T d1ulua_ 103 EGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG 139 (256)
T ss_dssp SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE
T ss_pred ccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC
Confidence 23 25789999999999999999999999763
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=98.99 E-value=1.7e-10 Score=101.88 Aligned_cols=108 Identities=15% Similarity=0.100 Sum_probs=82.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhh---hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc-
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQ---TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~- 150 (313)
++++..+ ++|.+|+.+++....+.+. .++++. ...+|..++++++++++.+.+++|++|+||||||....+++.
T Consensus 19 ~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~ 97 (241)
T d2a4ka1 19 RAALDLFAREGASLVAVDREERLLAEA-VAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWN 97 (241)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHH-HHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC---
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHH-HHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEeccccccccccchhh
Confidence 4444444 5677888777655443222 122221 245688899999999999999999999999999998888863
Q ss_pred ---hhhhhhhhcccccHHHHHHHHhhcccCCCceEEe
Q psy2266 151 ---QRAETTLATNFFALVTVCHILFPLLRPHARVVNV 184 (313)
Q Consensus 151 ---~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~v 184 (313)
++|..++++|+.+++.++++++|+|++++.|+++
T Consensus 98 ~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ 134 (241)
T d2a4ka1 98 LPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLT 134 (241)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred hhccccccccccccccccccccccccccccccceeec
Confidence 7899999999999999999999999887776654
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.95 E-value=2.5e-10 Score=100.89 Aligned_cols=100 Identities=15% Similarity=0.078 Sum_probs=79.2
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG---- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~---- 150 (313)
++++..+ ++|.+|+.+++....+.+.........+.+|..++++++++++.+.++||++|+||||||...++++.
T Consensus 19 ~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~ 98 (242)
T d1ulsa_ 19 RATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPL 98 (242)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCH
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCcccccCchhhCcc
Confidence 4444444 56788888877655443332111123356788899999999999999999999999999999888874
Q ss_pred hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 151 QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
++|+.++++|+.|+++++++++|.|
T Consensus 99 ~~~~~~~~vNl~~~~~~~~~~~~~m 123 (242)
T d1ulsa_ 99 EDWELVLRVNLTGSFLVAKAASEAM 123 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhccccccchhhhhhhhhccccc
Confidence 7899999999999999999999977
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=98.94 E-value=2.9e-10 Score=100.89 Aligned_cols=104 Identities=13% Similarity=0.092 Sum_probs=81.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh-----hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR-----QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~ 149 (313)
++++..+ ++|.+|+.++.....+... .+++. ..+.+|..++++++++++.+.++||++|+||||||....+++
T Consensus 20 ~aia~~la~~Ga~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~ 98 (251)
T d1zk4a1 20 LAIATKFVEEGAKVMITGRHSDVGEKA-AKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSV 98 (251)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCT
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHH-HHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeccccccccch
Confidence 4444444 5678888877654433222 11111 235678889999999999999999999999999999988887
Q ss_pred c----hhhhhhhhcccccHHHHHHHHhhcccCCCc
Q psy2266 150 G----QRAETTLATNFFALVTVCHILFPLLRPHAR 180 (313)
Q Consensus 150 ~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~ 180 (313)
. ++|+.++++|+.|+++++++++|.|++.+.
T Consensus 99 ~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~ 133 (251)
T d1zk4a1 99 EETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL 133 (251)
T ss_dssp TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS
T ss_pred hcccccchhhhccccccccchhHHHHHHHHHhcCC
Confidence 4 789999999999999999999999998765
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.91 E-value=5.5e-10 Score=99.18 Aligned_cols=102 Identities=17% Similarity=0.122 Sum_probs=80.2
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++....+.+. .+++. ....+|..++++++++++.+.++||++|+||||||....++
T Consensus 16 ~aia~~la~~Ga~V~i~~r~~~~l~~~-~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~ 94 (257)
T d2rhca1 16 LEIARRLGKEGLRVFVCARGEEGLRTT-LKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA 94 (257)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHH-HHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEecccccCCCC
Confidence 3444434 5678888887655444332 22222 12467888999999999999999999999999999998888
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhhcccCC
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
+. ++|+.++++|+.|+++++++++|+|+..
T Consensus 95 ~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~ 128 (257)
T d2rhca1 95 TAELADELWLDVVETNLTGVFRVTKQVLKAGGML 128 (257)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHH
T ss_pred hHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHH
Confidence 74 7999999999999999999999988754
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.90 E-value=8.3e-10 Score=98.09 Aligned_cols=112 Identities=11% Similarity=0.070 Sum_probs=85.4
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc-
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~- 150 (313)
++++..+ ++|.+|+.++.....+.+.. .+++ ..+.+|..++++++++++.+.++||++|+||||||....+++.
T Consensus 19 ~aia~~la~~Ga~V~~~~r~~~~l~~~~-~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~ 97 (256)
T d1k2wa_ 19 RAFAEAYVREGARVAIADINLEAARATA-AEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVE 97 (256)
T ss_dssp HHHHHHHHHTTEEEEEEESCHHHHHHHH-HHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGG
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHH-HHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeeccccccccccc
Confidence 4444444 56778887776554433321 2222 2256788899999999999999999999999999998888874
Q ss_pred ---hhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCc
Q psy2266 151 ---QRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKL 188 (313)
Q Consensus 151 ---~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~ 188 (313)
++|+.++++|+.|+++++++++|.|.++++--.|--..
T Consensus 98 ~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~is 138 (256)
T d1k2wa_ 98 ITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMA 138 (256)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred CCHHHHHhhhceeeeccccchhhccchhHHhccCCcccccc
Confidence 78999999999999999999999999877654444333
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.90 E-value=2.7e-09 Score=93.34 Aligned_cols=161 Identities=12% Similarity=0.014 Sum_probs=121.4
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcC--CccEEEeccCcCCCCCc---
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNG--PLDKILDTAMDTAPGSF--- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G--~lD~Linna~~~~~~~~--- 149 (313)
++++..+ ++|.+|+.+......... ......++..+.++.+.+...+.+.++ ++|+||||||++..++.
T Consensus 16 ~a~a~~l~~~G~~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~ 90 (236)
T d1dhra_ 16 SRCVQAFRARNWWVASIDVVENEEAS-----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSK 90 (236)
T ss_dssp HHHHHHHHTTTCEEEEEESSCCTTSS-----EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCT
T ss_pred HHHHHHHHHCCCEEEEEeCCcccccc-----ccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECCcccccccchhc
Confidence 4444444 457777776543322111 111234455567778888888877765 79999999998655432
Q ss_pred --chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhc
Q psy2266 150 --GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEG 227 (313)
Q Consensus 150 --~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (313)
.+.|+.++++|+.+.+.++++++|+|+++|+||++||.++...
T Consensus 91 ~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~----------------------------------- 135 (236)
T d1dhra_ 91 SLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG----------------------------------- 135 (236)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------------------------------
T ss_pred CCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCC-----------------------------------
Confidence 3679999999999999999999999999999999999998752
Q ss_pred ccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 228 KDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 228 ~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.....+|++||+|+.+|+|+++.|++.. ++||+||+|+||+|+|||.+.
T Consensus 136 -----~~~~~~Y~asKaal~~lt~~la~El~~~--~~gI~vn~v~PG~v~T~~~~~ 184 (236)
T d1dhra_ 136 -----TPGMIGYGMAKGAVHQLCQSLAGKNSGM--PSGAAAIAVLPVTLDTPMNRK 184 (236)
T ss_dssp -----CTTBHHHHHHHHHHHHHHHHHTSTTSSC--CTTCEEEEEEESCEECHHHHH
T ss_pred -----ccCCcccHHHHHHHHHHHHHHHHHhccC--CCcEEEEEEEeccCcCCcchh
Confidence 2344569999999999998888887632 359999999999999999764
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=98.89 E-value=5.4e-10 Score=99.01 Aligned_cols=98 Identities=15% Similarity=0.112 Sum_probs=76.4
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc---
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG--- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~--- 150 (313)
++++..+ ++|.+|+......... +. .+..+ ..+.+|..++++++++++.+.++||++|+||||||...++++.
T Consensus 19 ~aia~~la~~G~~V~~~~~~~~~~-~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~ 96 (248)
T d2d1ya1 19 RAIAQAFAREGALVALCDLRPEGK-EV-AEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVR 96 (248)
T ss_dssp HHHHHHHHHTTCEEEEEESSTTHH-HH-HHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHH-HH-HHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCC
Confidence 4444444 5677877776543221 11 11222 2356788899999999999999999999999999998888873
Q ss_pred -hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 151 -QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 151 -~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
++|+++|++|+.|+++++++++|.|
T Consensus 97 ~e~~~~~~~vNl~g~~~~~~~~~p~m 122 (248)
T d2d1ya1 97 LPEWRRVLEVNLTAPMHLSALAAREM 122 (248)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhHhhhhhhhcccc
Confidence 7899999999999999999999987
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=98.87 E-value=1.1e-09 Score=96.72 Aligned_cols=98 Identities=10% Similarity=0.010 Sum_probs=74.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc-
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~- 150 (313)
++++..+ ++|.+|+.+........+...+..+ ..+.+|..++++++++++.+.++||++|+||||||....+++.
T Consensus 19 ~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~ 98 (247)
T d2ew8a1 19 RAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDE 98 (247)
T ss_dssp HHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGG
T ss_pred HHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHh
Confidence 4455444 5677888776543221111011111 1246688899999999999999999999999999999888874
Q ss_pred ---hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 ---QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 ---~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++|+++|++|+.|+++++++++|
T Consensus 99 ~~~e~~~~~~~vNl~~~~~~~~~~~~ 124 (247)
T d2ew8a1 99 LTFEQWKKTFEINVDSGFLMAKAFVP 124 (247)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCHHHhhhhheeehhhhhHHHHHHHh
Confidence 79999999999999999999999
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=98.85 E-value=1.3e-09 Score=96.87 Aligned_cols=97 Identities=14% Similarity=0.069 Sum_probs=75.0
Q ss_pred HHHHhcc-cCCceEEEEeccccc-ccCCCchhhh-------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGM-LYNVPSQELR-------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP 146 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~-~~~~~~~~~~-------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~ 146 (313)
++++..+ ++|.+|+.++..... +++. ...+. ....+|..++++++++++.+.++||++|+||||||....
T Consensus 18 ~aiA~~la~~Ga~V~~~~r~~~~~~~~~-~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~ 96 (260)
T d1x1ta1 18 LGIATALAAQGADIVLNGFGDAAEIEKV-RAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHT 96 (260)
T ss_dssp HHHHHHHHHTTCEEEEECCSCHHHHHHH-HHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCcHHHHHHH-HHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCcEEEeecccccC
Confidence 4444444 567888887765322 2222 11111 124678889999999999999999999999999999988
Q ss_pred CCcc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 147 GSFG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 147 ~~~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+++. ++|+.+|++|+.|+++++++++|
T Consensus 97 ~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~ 127 (260)
T d1x1ta1 97 ALIEDFPTEKWDAILALNLSAVFHGTAAALP 127 (260)
T ss_dssp CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CchhhhhHHhhhhhhhccccccccccchhhh
Confidence 8874 78999999999999999999999
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.84 E-value=9.3e-10 Score=101.12 Aligned_cols=130 Identities=11% Similarity=0.171 Sum_probs=110.0
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC--CCCcc----hhhhhhhhcccccHHHHHHHHhhcccCCCceEE
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA--PGSFG----QRAETTLATNFFALVTVCHILFPLLRPHARVVN 183 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~--~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~ 183 (313)
..+|..+.++++++++.+.+.||++|+||||||... .+++. ++|.++|++|++|.+.++|+++|+|+++|+||+
T Consensus 90 ~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsIv~ 169 (329)
T d1uh5a_ 90 KRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIIS 169 (329)
T ss_dssp HHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred hhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccccccccc
Confidence 345677888899999999999999999999999754 34553 689999999999999999999999999999999
Q ss_pred ecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCC
Q psy2266 184 VASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRR 263 (313)
Q Consensus 184 vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~ 263 (313)
+||..+.... ......|++||+|+..|+|.++.||+++
T Consensus 170 iss~~~~~~~---------------------------------------p~y~~~y~asKaal~~ltr~lA~Ela~~--- 207 (329)
T d1uh5a_ 170 LTYHASQKVV---------------------------------------PGYGGGMSSAKAALESDTRVLAYHLGRN--- 207 (329)
T ss_dssp EECGGGTSCC---------------------------------------TTCTTTHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred ceeehhcccc---------------------------------------cccchhhhhhhccccccchhhHHHHhcc---
Confidence 9998886521 0012359999999999999999999752
Q ss_pred CCeEEEeecccccccccc
Q psy2266 264 PDIIVNPVHPGYVNTDLT 281 (313)
Q Consensus 264 ~gI~vn~v~PG~v~T~~~ 281 (313)
+|||||+|+||+|+|+..
T Consensus 208 ~gIRVNaI~PG~i~T~a~ 225 (329)
T d1uh5a_ 208 YNIRINTISAGPLKSRAA 225 (329)
T ss_dssp HCCEEEEEEECCCCCTTG
T ss_pred cCcEEEEEecCcccchhh
Confidence 299999999999999543
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.84 E-value=1.5e-09 Score=96.22 Aligned_cols=100 Identities=15% Similarity=0.158 Sum_probs=78.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.++.....+.+...+... ..+.+|..++++++++++.+.+++|++|+||||||....++
T Consensus 19 ~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~ 98 (251)
T d1vl8a_ 19 FGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHP 98 (251)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 4444444 5678888887665544333222111 12467888999999999999999999999999999988888
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
+. ++|+.++++|+.|++++++.++|.|
T Consensus 99 ~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m 129 (251)
T d1vl8a_ 99 AEEFPLDEFRQVIEVNLFGTYYVCREAFSLL 129 (251)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHhhhhhhhhhhhhhhhcc
Confidence 74 7999999999999999999999987
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.83 E-value=3.4e-09 Score=93.14 Aligned_cols=92 Identities=13% Similarity=0.077 Sum_probs=71.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG---- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~---- 150 (313)
++++..+ ++|.+|+.+........+. ....+|..++++++++++.+.+++|++|+||||||...++++.
T Consensus 21 ~aia~~la~~Ga~V~~~~r~~~~~~~~------~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~ 94 (237)
T d1uzma1 21 LAIAQRLAADGHKVAVTHRGSGAPKGL------FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTE 94 (237)
T ss_dssp HHHHHHHHHTTCEEEEEESSSCCCTTS------EEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCH
T ss_pred HHHHHHHHHCCCEEEEEECCcchhcCc------eEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeecccccccHhhCCH
Confidence 4444444 5678888877655443322 2356788999999999999999999999999999998888763
Q ss_pred hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++|++++++|+.|+++++++++|
T Consensus 95 e~~~~~~~vNl~~~~~~~~~~~~ 117 (237)
T d1uzma1 95 EKFEKVINANLTGAFRVAQRASR 117 (237)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhhhhhhhhhh
Confidence 79999999999999999999998
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.83 E-value=2e-09 Score=95.01 Aligned_cols=98 Identities=12% Similarity=0.087 Sum_probs=74.2
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+...+......+...+.+. ..+.+|..++++++++++.+.++||++|+||||||....++
T Consensus 15 ~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~ 94 (244)
T d1edoa_ 15 KAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTL 94 (244)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCccccccccccccc
Confidence 4444434 5677887654433222111122221 12567888999999999999999999999999999998888
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+. ++|++++++|+.|+++++++++|
T Consensus 95 ~~~~~~~~~~~~~~vNl~~~~~~~~~~~~ 123 (244)
T d1edoa_ 95 LIRMKKSQWDEVIDLNLTGVFLCTQAATK 123 (244)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred hhccchHHHHHHHhhhhhhHHHHHHHHHH
Confidence 74 79999999999999999999999
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=98.82 E-value=2.2e-09 Score=95.76 Aligned_cols=106 Identities=13% Similarity=0.077 Sum_probs=81.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.++.......+...+++. ..+.+|..++++++++++.+.+++|++|+||||||...+.+
T Consensus 21 ~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~ 100 (261)
T d1geea_ 21 KSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVS 100 (261)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEeeccceecCCcc
Confidence 3444433 5677888877654322221122221 12567888999999999999999999999999999998888
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhhcccCCCce
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFPLLRPHARV 181 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~i 181 (313)
+. ++|++++++|+.|+++++++++|.|++++.-
T Consensus 101 ~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g 137 (261)
T d1geea_ 101 SHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIK 137 (261)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC
T ss_pred hhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccccc
Confidence 74 7999999999999999999999999986653
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.82 E-value=2.1e-09 Score=94.83 Aligned_cols=97 Identities=12% Similarity=0.118 Sum_probs=77.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc-
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~- 150 (313)
++++..+ ++|.+|+.+++....+.+.. ++++ ..+.+|..++++++++++.+.++||++|+||||||....+++.
T Consensus 18 ~a~a~~l~~~G~~Vv~~~r~~~~l~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~ 96 (243)
T d1q7ba_ 18 RAIAETLAARGAKVIGTATSENGAQAIS-DYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMR 96 (243)
T ss_dssp HHHHHHHHHTTCEEEEEESSHHHHHHHH-HHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGG
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcceehhhhhhcccccccc
Confidence 4444444 56788888877655444332 2222 2356788899999999999999999999999999999888874
Q ss_pred ---hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 ---QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 ---~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++|+.++++|+.|+++++++++|
T Consensus 97 ~~~~~~~~~~~vNl~~~~~~~~~~~~ 122 (243)
T d1q7ba_ 97 MKDEEWNDIIETNLSSVFRLSKAVMR 122 (243)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccccccccccceeechhhhhHHHHHH
Confidence 79999999999999999999999
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.77 E-value=2.9e-09 Score=94.07 Aligned_cols=97 Identities=13% Similarity=0.008 Sum_probs=76.1
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc-
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~- 150 (313)
++++..+ ++|.+|+.++.....+.... ++++ ....+|..++++++++++.+.+++|++|+|+||||....+++.
T Consensus 20 ~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~ 98 (244)
T d1nffa_ 20 ASHVRAMVAEGAKVVFGDILDEEGKAMA-AELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIED 98 (244)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTT
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHH-HHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEECCcccCCCchhh
Confidence 3444434 56788888776654433321 1222 2246788899999999999999999999999999998888774
Q ss_pred ---hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 ---QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 ---~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++|+++|++|+.|++.+++.++|
T Consensus 99 ~~~~~~~~~~~vNl~~~~~~~~~~~~ 124 (244)
T d1nffa_ 99 YALTEWQRILDVNLTGVFLGIRAVVK 124 (244)
T ss_dssp SCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCHHHHhHHhhcccchhhHHHHHHHh
Confidence 78999999999999999999998
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.77 E-value=3e-09 Score=94.45 Aligned_cols=98 Identities=15% Similarity=0.234 Sum_probs=79.2
Q ss_pred cccCCceEEEEecccccccCCCchhhh--------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc---
Q psy2266 81 LLRPHARVVNVASKLGMLYNVPSQELR--------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF--- 149 (313)
Q Consensus 81 ~m~~~g~IV~isS~~~~~~~~~~~~~~--------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~--- 149 (313)
+.++|.+||.+++....+++... ++. ..+.+|..++++++++++.+.++||++|+||||||...++++
T Consensus 30 la~~G~~Vv~~~r~~~~l~~~~~-~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~ 108 (257)
T d1xg5a_ 30 LVQQGLKVVGCARTVGNIEELAA-ECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSG 108 (257)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHH-HHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTC
T ss_pred HHHCCCEEEEEECCHHHHHHHHH-HHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccCCCccccc
Confidence 33668888888876655444322 111 124678889999999999999999999999999999888876
Q ss_pred -chhhhhhhhcccccHHHHHHHHhhcccCCC
Q psy2266 150 -GQRAETTLATNFFALVTVCHILFPLLRPHA 179 (313)
Q Consensus 150 -~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g 179 (313)
.++|+..+++|+.|++++++.++|.|++.+
T Consensus 109 ~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~ 139 (257)
T d1xg5a_ 109 STSGWKDMFNVNVLALSICTREAYQSMKERN 139 (257)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHhhhhhhhhHHHHHHHHHHHHHHHhc
Confidence 479999999999999999999999997643
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.75 E-value=3e-09 Score=94.24 Aligned_cols=100 Identities=17% Similarity=0.185 Sum_probs=75.3
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CCCcc--
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PGSFG-- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~~~~-- 150 (313)
++++..+ ++|.+|+.++.....+.....+... ..+.+|..++++++++++.+.++||++|+||||||... ..++.
T Consensus 20 ~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~ 99 (250)
T d1ydea1 20 AGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEET 99 (250)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccccccccccc
Confidence 4444444 5678888877654443322211111 23567888999999999999999999999999999764 44553
Q ss_pred --hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 151 --QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 151 --~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
++|++++++|+.|+++++++++|.|
T Consensus 100 ~~~~~~~~~~vNl~g~~~~~~~~~p~m 126 (250)
T d1ydea1 100 SAQGFRQLLELNLLGTYTLTKLALPYL 126 (250)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhhHHHHHHHhhHHH
Confidence 6899999999999999999999988
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=98.75 E-value=3.7e-09 Score=93.95 Aligned_cols=98 Identities=13% Similarity=0.042 Sum_probs=73.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhh------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC-C
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQEL------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-P 146 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~ 146 (313)
++++..+ ++|.+|+.++.....+........ + ....+|..++++++++++.+.++||++|+||||||... .
T Consensus 18 ~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~ 97 (258)
T d1iy8a_ 18 RATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQ 97 (258)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccC
Confidence 3444433 567888877765544333211111 1 12456888999999999999999999999999999764 4
Q ss_pred CCcc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 147 GSFG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 147 ~~~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+++. ++|+++|++|+.|+++++++++|
T Consensus 98 ~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~ 128 (258)
T d1iy8a_ 98 NPTESFTAAEFDKVVSINLRGVFLGLEKVLK 128 (258)
T ss_dssp BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CchhhhhhhHHHHHhhhhccchhhhhhhhHh
Confidence 5663 78999999999999999999998
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=98.75 E-value=3.1e-09 Score=93.51 Aligned_cols=85 Identities=19% Similarity=0.214 Sum_probs=69.1
Q ss_pred EEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhh
Q psy2266 88 VVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTL 157 (313)
Q Consensus 88 IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~ 157 (313)
++..++....+.+.. .++. ..+.+|..++++++++++.+.++||++|+||||||....+++. ++|+++|
T Consensus 35 v~~~~r~~~~l~~~~-~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~ 113 (240)
T d2bd0a1 35 LVLSSRTAADLEKIS-LECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTM 113 (240)
T ss_dssp EEEEESCHHHHHHHH-HHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred EEEEeCCHHHHHHHH-HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcC
Confidence 666666554443332 2221 1246788899999999999999999999999999999888874 7999999
Q ss_pred hcccccHHHHHHHHhh
Q psy2266 158 ATNFFALVTVCHILFP 173 (313)
Q Consensus 158 ~~N~~g~~~~~~~~~p 173 (313)
++|++|++++++.++|
T Consensus 114 ~vNl~g~~~~~~~~~~ 129 (240)
T d2bd0a1 114 NTNLKGTFFLTQALFA 129 (240)
T ss_dssp HHHTHHHHHHHHHHHH
T ss_pred CEeehHHHHHHHHHhH
Confidence 9999999999999999
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=98.74 E-value=4.5e-09 Score=93.36 Aligned_cols=97 Identities=13% Similarity=0.038 Sum_probs=75.8
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc-
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~- 150 (313)
++++..+ ++|.+|+.++.....+.+. ..++. ....+|..++++++++++.+.++||++|+||||||.....++.
T Consensus 19 ~aia~~la~~Ga~V~~~~r~~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~ 97 (254)
T d1hdca_ 19 AEAARQAVAAGARVVLADVLDEEGAAT-ARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLET 97 (254)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGG
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHH-HHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEecCcccccccccc
Confidence 3444433 5677888777655443332 11222 2356788899999999999999999999999999998888864
Q ss_pred ---hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 ---QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 ---~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++|+.++++|+.|+++++++++|
T Consensus 98 ~~~~~~~~~~~vN~~~~~~~~~~~~p 123 (254)
T d1hdca_ 98 ESVERFRKVVEINLTGVFIGMKTVIP 123 (254)
T ss_dssp SCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccccccchhhhHHhhHHHHHHHHHHH
Confidence 78999999999999999999998
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.73 E-value=3.9e-09 Score=93.59 Aligned_cols=99 Identities=16% Similarity=0.128 Sum_probs=77.6
Q ss_pred HHHHhc-ccCCceEEEEecccccccCCCchhhhh---hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc-
Q psy2266 76 HILFPL-LRPHARVVNVASKLGMLYNVPSQELRQ---TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG- 150 (313)
Q Consensus 76 ra~~~~-m~~~g~IV~isS~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~- 150 (313)
++++.. +++|.+|+..+.....+.+.. .+++. ...+|..++++++++++.+.+++|++|+||||||...++++.
T Consensus 20 ~aia~~la~~Ga~V~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~ 98 (253)
T d1hxha_ 20 LEVVKLLLGEGAKVAFSDINEAAGQQLA-AELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMET 98 (253)
T ss_dssp HHHHHHHHHTTCEEEEECSCHHHHHHHH-HHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTT
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHH-HHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEecccccCCCCccc
Confidence 344443 356788887776554443332 22222 245688899999999999999999999999999998888763
Q ss_pred ---hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 151 ---QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 151 ---~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
++|++++++|+.|+++++++++|.|
T Consensus 99 ~~~~~~~~~~~vNl~~~~~~~~~~~~~m 126 (253)
T d1hxha_ 99 GRLEDFSRLLKINTESVFIGCQQGIAAM 126 (253)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 7899999999999999999999988
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.70 E-value=7.6e-09 Score=91.30 Aligned_cols=100 Identities=10% Similarity=0.089 Sum_probs=79.1
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhh----h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQEL----R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~----~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~ 149 (313)
++++..+ ++|.+|+.+++....+.+...+-. + +...+|..++++++++++.+.+++|++|+|+||||.....++
T Consensus 21 ~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag~~~~~~~ 100 (244)
T d1yb1a_ 21 RLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDL 100 (244)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeeccccccccc
Confidence 4444433 568888888876655444322211 1 235778899999999999999999999999999999888876
Q ss_pred c----hhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 150 G----QRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 150 ~----~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
. +.|+.+|++|++|++++++.++|.|
T Consensus 101 ~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m 130 (244)
T d1yb1a_ 101 FATQDPQIEKTFEVNVLAHFWTTKAFLPAM 130 (244)
T ss_dssp GGGHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cccchhHHHhhcceeeeccHHHHHHHhhhH
Confidence 4 6899999999999999999999987
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.70 E-value=6.2e-09 Score=91.61 Aligned_cols=102 Identities=18% Similarity=0.193 Sum_probs=73.8
Q ss_pred HHHHhcc-cCCc--eEEEEecccccccCCCch-hhh-hhhcccCCCHHHHHHHHHHHHHHcCC--ccEEEeccCcCCC-C
Q psy2266 76 HILFPLL-RPHA--RVVNVASKLGMLYNVPSQ-ELR-QTLFNESLTEDQLLDMMTDYVQYNGP--LDKILDTAMDTAP-G 147 (313)
Q Consensus 76 ra~~~~m-~~~g--~IV~isS~~~~~~~~~~~-~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~--lD~Linna~~~~~-~ 147 (313)
++++..+ ++|. .|+.+++....+.++... +.+ +...+|..++++++++++.+.+.+|. +|+|+||||...+ +
T Consensus 17 ~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~ 96 (250)
T d1yo6a1 17 LGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYG 96 (250)
T ss_dssp HHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBC
T ss_pred HHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCC
Confidence 3444444 4443 566666655444332111 112 23566888999999999999999874 9999999998643 4
Q ss_pred Cc----chhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 148 SF----GQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 148 ~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
++ .++|+.+|++|+.|++.+++.++|+|++
T Consensus 97 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~ 130 (250)
T d1yo6a1 97 TNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKN 130 (250)
T ss_dssp TTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHH
T ss_pred ccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 43 3689999999999999999999999975
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.69 E-value=7.8e-09 Score=91.66 Aligned_cols=97 Identities=15% Similarity=0.180 Sum_probs=75.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++....+.+. .+++. ..+.+|..++++++++++.+.++||++|+||||||...+.+
T Consensus 25 ~aia~~la~~Ga~V~~~~r~~~~~~~~-~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~ 103 (255)
T d1fmca_ 25 KEIAITFATAGASVVVSDINADAANHV-VDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKP 103 (255)
T ss_dssp HHHHHHHHTTTCEEEEEESCHHHHHHH-HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHH-HHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCCCCc
Confidence 4455444 5578888877655443332 22222 12567888999999999999999999999999999987777
Q ss_pred c---chhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 F---GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 ~---~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+ .++|++++++|+.|+++++++++|
T Consensus 104 ~e~~~e~~~~~~~vNl~~~~~~~~~~~~ 131 (255)
T d1fmca_ 104 FDMPMADFRRAYELNVFSFFHLSQLVAP 131 (255)
T ss_dssp TTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHhhhhHHHHHh
Confidence 6 378999999999999999999998
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.67 E-value=1.3e-08 Score=90.04 Aligned_cols=97 Identities=13% Similarity=0.182 Sum_probs=75.8
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++....+.+. .+++. ..+.+|..++++++++++.+.++||++|+||||||.....+
T Consensus 24 ~a~a~~la~~Ga~V~~~~r~~~~l~~~-~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnag~~~~~~ 102 (251)
T d2c07a1 24 REIAKMLAKSVSHVICISRTQKSCDSV-VDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNL 102 (251)
T ss_dssp HHHHHHHTTTSSEEEEEESSHHHHHHH-HHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCC
T ss_pred HHHHHHHHHcCCEEEEEECCHHHHHHH-HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCceeeeeccccccccc
Confidence 4555544 5577888777655443332 12221 22567888999999999999999999999999999988887
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+. ++|+.++++|+.|+++++++++|
T Consensus 103 ~~~~~~~~~~~~~~vNl~~~~~~~~~~~~ 131 (251)
T d2c07a1 103 FLRMKNDEWEDVLRTNLNSLFYITQPISK 131 (251)
T ss_dssp TTTCCHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred cccccHHHHhhhheeeehhhhhhhhhcCc
Confidence 63 79999999999999999999998
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.66 E-value=1e-08 Score=91.57 Aligned_cols=98 Identities=19% Similarity=0.242 Sum_probs=74.8
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCch-------hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQ-------ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP 146 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~-------~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~ 146 (313)
++++..+ ++|.+|+.++.....+.+.... ..+ ....+|..++++++++++.+.++||++|+||||||...+
T Consensus 19 ~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~ 98 (272)
T d1xkqa_ 19 RTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIP 98 (272)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeCCcccCc
Confidence 4454444 5678888887665443332111 111 235678889999999999999999999999999999877
Q ss_pred CCcc--------hhhhhhhhcccccHHHHHHHHhh
Q psy2266 147 GSFG--------QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 147 ~~~~--------~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+++. +.|++++++|+.|++.++++++|
T Consensus 99 ~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p 133 (272)
T d1xkqa_ 99 DAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKP 133 (272)
T ss_dssp CTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccccccchhccHHHHHHHHHhhhhHHHHHHHhhcc
Confidence 6652 35999999999999999999999
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=98.66 E-value=1.2e-08 Score=90.93 Aligned_cols=98 Identities=11% Similarity=0.111 Sum_probs=73.8
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCch----hhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC--
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQ----ELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS-- 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~-- 148 (313)
++++..+ ++|.+|+.++.....+.+.... +......+|..++++++++++.+.++||++|+||||||.....+
T Consensus 20 ~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~ 99 (268)
T d2bgka1 20 ETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYS 99 (268)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSS
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcceeccccccccCCCcc
Confidence 4444444 5678888887655443322111 11123467888999999999999999999999999999865543
Q ss_pred c----chhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 F----GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 ~----~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+ .++|+.++++|+.|+++++++++|
T Consensus 100 ~~~~~~~~~~~~~~vNl~g~~~~~~~~~~ 128 (268)
T d2bgka1 100 ILEAGNEDFKRVMDINVYGAFLVAKHAAR 128 (268)
T ss_dssp TTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccCcHHHHHHHHHHhhcchhhhhhhhcc
Confidence 3 378999999999999999999999
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=98.66 E-value=1.1e-08 Score=90.81 Aligned_cols=97 Identities=11% Similarity=0.087 Sum_probs=74.5
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC-CC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA-PG 147 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~-~~ 147 (313)
++++..+ ++|.+|+.+++....+.+. ...+. ..+.+|..++++++++++.+.++||++|+||||||... .+
T Consensus 19 ~aia~~la~~Ga~V~~~~r~~~~l~~~-~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~ 97 (260)
T d1zema1 19 LATALRLAEEGTAIALLDMNREALEKA-EASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFA 97 (260)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCB
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHH-HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCeehhhhccccccC
Confidence 3444433 5678888877655443332 11221 12567888999999999999999999999999999864 46
Q ss_pred Ccc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 148 SFG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 148 ~~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++. ++|++++++|+.|+++++++++|
T Consensus 98 ~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~ 127 (260)
T d1zema1 98 PVQDYPSDDFARVLTINVTGAFHVLKAVSR 127 (260)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccccccHHHHHhhccccccccccchhhHHh
Confidence 663 78999999999999999999998
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.66 E-value=1e-08 Score=91.15 Aligned_cols=98 Identities=18% Similarity=0.214 Sum_probs=70.5
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCch-------hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQ-------ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP 146 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~-------~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~ 146 (313)
++++..+ ++|.+|+.+++....+.+...+ ..+ ..+.+|..++++++++++.+.++||++|+||||||...+
T Consensus 19 ~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~ 98 (264)
T d1spxa_ 19 RATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIP 98 (264)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC----
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEeecccccccC
Confidence 4444434 6688888887765544333211 111 224668889999999999999999999999999998644
Q ss_pred CCc--------chhhhhhhhcccccHHHHHHHHhh
Q psy2266 147 GSF--------GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 147 ~~~--------~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.++ .++|+.+|++|+.|++.++++++|
T Consensus 99 ~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p 133 (264)
T d1spxa_ 99 DSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVP 133 (264)
T ss_dssp ---------CCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CccccccccCCHHHHHHHHHHhHHHHHHHHhhhCC
Confidence 332 368999999999999999999998
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.63 E-value=1.1e-08 Score=90.80 Aligned_cols=98 Identities=12% Similarity=0.054 Sum_probs=71.2
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhh----h-hhhcccCCCHHHHHHHHHHHHHHc-CCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQEL----R-QTLFNESLTEDQLLDMMTDYVQYN-GPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~----~-~~~~~d~~~~~~~~~~~~~~~~~~-G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++....+.+...... . ....+|..++++++++++.+.++| |++|+|+||||...+++
T Consensus 22 ~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~ 101 (259)
T d1xq1a_ 22 HAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKP 101 (259)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC-----
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcccccccccccCCCc
Confidence 3444333 568888888876655443322111 1 124678889999999999999999 78999999999988888
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+. ++|+.++++|+.|+++++++++|
T Consensus 102 ~~~~~~~~~~~~~~vNl~g~~~~~~~~~~ 130 (259)
T d1xq1a_ 102 TLDYTAEDFSFHISTNLESAYHLSQLAHP 130 (259)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHhhhheeeehhhhh
Confidence 63 78999999999999999999999
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=98.62 E-value=1.8e-08 Score=89.45 Aligned_cols=97 Identities=12% Similarity=0.065 Sum_probs=75.5
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcC-CccEEEeccCcCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNG-PLDKILDTAMDTAPG 147 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G-~lD~Linna~~~~~~ 147 (313)
++++..+ ++|.+|+.+++....+.+. ..++. ....+|..++++++++++.+.+++| ++|+||||||.....
T Consensus 22 ~aia~~la~~Ga~V~~~~r~~~~l~~~-~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idilvnnAG~~~~~ 100 (259)
T d2ae2a_ 22 YGIVEELASLGASVYTCSRNQKELNDC-LTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYK 100 (259)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHH-HHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCceEEEECCceeccC
Confidence 3444333 5678888887655544333 12221 1246788899999999999999997 899999999998888
Q ss_pred Ccc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 148 SFG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 148 ~~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++. ++|++++++|+.|++++++.++|
T Consensus 101 ~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~ 130 (259)
T d2ae2a_ 101 EAKDYTVEDYSLIMSINFEAAYHLSVLAHP 130 (259)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHhcccceeEEEEeeccc
Confidence 874 78999999999999999999998
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.61 E-value=6.9e-09 Score=91.70 Aligned_cols=92 Identities=5% Similarity=0.015 Sum_probs=71.7
Q ss_pred cccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcC-CCCCcc----hhhhh
Q psy2266 81 LLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDT-APGSFG----QRAET 155 (313)
Q Consensus 81 ~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~-~~~~~~----~~~~~ 155 (313)
+.++|.+|+........+++. .........+|+.++++++++++.+.++||++|+||||||.. ..+|+. ++|+.
T Consensus 20 la~~Ga~V~i~~r~~~~~~~~-~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~ 98 (252)
T d1zmta1 20 LSEAGHTVACHDESFKQKDEL-EAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRG 98 (252)
T ss_dssp HHHTTCEEEECCGGGGSHHHH-HHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHH
T ss_pred HHHCCCEEEEEECCHHHHHHH-HhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHH
Confidence 345678888776654443332 111223356788899999999999999999999999999975 456764 78999
Q ss_pred hhhcccccHHHHHHHHhh
Q psy2266 156 TLATNFFALVTVCHILFP 173 (313)
Q Consensus 156 ~~~~N~~g~~~~~~~~~p 173 (313)
++++|+.|+++++++++|
T Consensus 99 ~~~vnl~~~~~~~~~~~~ 116 (252)
T d1zmta1 99 AVEALQIRPFALVNAVAS 116 (252)
T ss_dssp HHHHHTHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHH
Confidence 999999999999999999
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.61 E-value=1.5e-08 Score=89.66 Aligned_cols=99 Identities=17% Similarity=0.142 Sum_probs=75.5
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCch------hhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQ------ELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG 147 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~------~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~ 147 (313)
++++..+ ++|.+|+.++.....+.+.... +.+ ....+|..++++++++++.+.+++|++|+||||||....
T Consensus 17 ~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAg~~~~- 95 (254)
T d2gdza1 17 RAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE- 95 (254)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCS-
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCcCeeccccccccc-
Confidence 4444444 5688888887765443222111 111 224678889999999999999999999999999998753
Q ss_pred CcchhhhhhhhcccccHHHHHHHHhhcccCC
Q psy2266 148 SFGQRAETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 148 ~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
++|++++++|+.+++.+++.++|.|++.
T Consensus 96 ---~~~~~~~~~n~~~~~~~~~~~~~~m~~~ 123 (254)
T d2gdza1 96 ---KNWEKTLQINLVSVISGTYLGLDYMSKQ 123 (254)
T ss_dssp ---SSHHHHHHHHTHHHHHHHHHHHHHHCGG
T ss_pred ---ccchheeeeehhhHHHHHHHHHHHHHHh
Confidence 5689999999999999999999999764
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.61 E-value=1.7e-08 Score=88.88 Aligned_cols=110 Identities=15% Similarity=0.092 Sum_probs=79.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc---
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG--- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~--- 150 (313)
++++..+ ++|.+|+.+++....+.+...+... ....+|..+++++++ +.+++|++|+||||||....+++.
T Consensus 21 ~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~----~~~~~g~iDilVnnAg~~~~~~~~~~~ 96 (244)
T d1pr9a_ 21 RGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATER----ALGSVGPVDLLVNNAAVALLQPFLEVT 96 (244)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHH----HHTTCCCCCEEEECCCCCCCBCGGGCC
T ss_pred HHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHH----HHHHhCCceEEEeccccccccchhhhh
Confidence 4454444 5678888887765544333211111 234567788887655 456799999999999999888874
Q ss_pred -hhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCcc
Q psy2266 151 -QRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLG 189 (313)
Q Consensus 151 -~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~ 189 (313)
++|+.++++|+.|++.+++.++|.|.++++--.+-...+
T Consensus 97 ~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS 136 (244)
T d1pr9a_ 97 KEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSS 136 (244)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred HHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccc
Confidence 799999999999999999999999988766555444443
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.60 E-value=2.7e-08 Score=90.32 Aligned_cols=64 Identities=9% Similarity=0.050 Sum_probs=59.4
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..+.++.+++++.+.++||++|+||||||+...+++. ++|+.++++|+.|++.++++++|
T Consensus 67 ~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p 134 (302)
T d1gz6a_ 67 AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWD 134 (302)
T ss_dssp EEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHH
Confidence 45677788999999999999999999999999999989874 78999999999999999999999
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.59 E-value=2e-08 Score=88.28 Aligned_cols=102 Identities=14% Similarity=0.085 Sum_probs=74.7
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc---
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG--- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~--- 150 (313)
++++..+ ++|.+|+.+.+....+.+...+..+ ....+|..+++++++ +.+++|++|+||||||....+++.
T Consensus 19 ~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~----~~~~~g~iDilVnnAg~~~~~~~~~~~ 94 (242)
T d1cyda_ 19 RDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEK----ALGGIGPVDLLVNNAALVIMQPFLEVT 94 (242)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHH----HHTTCCCCSEEEECCCCCCCBCGGGCC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHH----HHHHcCCCeEEEECCccccchhHHHHH
Confidence 4444444 5688888887665443332211111 224567778887654 567899999999999998888874
Q ss_pred -hhhhhhhhcccccHHHHHHHHhhcccCCCce
Q psy2266 151 -QRAETTLATNFFALVTVCHILFPLLRPHARV 181 (313)
Q Consensus 151 -~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~i 181 (313)
++|+.++++|+.|++++++.++|.|.+++.-
T Consensus 95 ~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~ 126 (242)
T d1cyda_ 95 KEAFDRSFSVNLRSVFQVSQMVARDMINRGVP 126 (242)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhccchHHHHHhchhhhhhccc
Confidence 7899999999999999999999999876543
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.58 E-value=2.4e-08 Score=89.29 Aligned_cols=98 Identities=10% Similarity=0.081 Sum_probs=73.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh--hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc---
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR--QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF--- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~--- 149 (313)
++++..+ ++|.+|+.++.....+.+...+... ....+|..++++++++++.+.++||++|+|+||||.....+.
T Consensus 19 ~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~ 98 (276)
T d1bdba_ 19 RALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVD 98 (276)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGG
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccccccccccCCCCcccc
Confidence 3444434 5678888887765554443222111 124668889999999999999999999999999998655432
Q ss_pred ------chhhhhhhhcccccHHHHHHHHhh
Q psy2266 150 ------GQRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 150 ------~~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
.+.|+++|++|+.|+++++++++|
T Consensus 99 ~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p 128 (276)
T d1bdba_ 99 LPEESLDAAFDEVFHINVKGYIHAVKACLP 128 (276)
T ss_dssp SCTTTHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccccchhhhhhHHHHHhhHHHHHHHHHHHH
Confidence 135999999999999999999999
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.57 E-value=2.5e-08 Score=90.39 Aligned_cols=97 Identities=15% Similarity=0.218 Sum_probs=75.8
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhh----------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCc
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQEL----------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMD 143 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~----------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~ 143 (313)
++++..+ ++|.+|+.+.+....+... .+++ + ..+.+|..++++++++++.+.+++|++|+||||||.
T Consensus 26 ~aia~~la~~Ga~Vvi~~r~~~~l~~~-~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~ 104 (297)
T d1yxma1 26 KAIVKELLELGSNVVIASRKLERLKSA-ADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG 104 (297)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHH-HHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhCCeEEEEeeccc
Confidence 4444434 5678888887665443322 1111 1 124678889999999999999999999999999999
Q ss_pred CCCCCcc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 144 TAPGSFG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 144 ~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
...+++. ++|+.++++|+.|+++++++++|
T Consensus 105 ~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~ 138 (297)
T d1yxma1 105 QFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYS 138 (297)
T ss_dssp CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccCchhhhhhhhhhhhhcccccchhhHHHHHHH
Confidence 8888874 78999999999999999999998
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.57 E-value=2.6e-08 Score=88.95 Aligned_cols=99 Identities=12% Similarity=0.125 Sum_probs=74.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhh--------h-hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQEL--------R-QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTA 145 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~--------~-~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~ 145 (313)
++++..+ ++|.+|+.+++....+.+... ++ + ....+|..++++++++++.+.++||++|+||||||...
T Consensus 18 ~aia~~la~~Ga~V~~~~r~~~~l~~~~~-~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~ 96 (274)
T d1xhla_ 18 RSAAVIFAKEGAQVTITGRNEDRLEETKQ-QILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANL 96 (274)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCCceEEEeeccccc
Confidence 3444433 567888888766544333211 11 1 22467888999999999999999999999999999764
Q ss_pred CCC--c----chhhhhhhhcccccHHHHHHHHhhcc
Q psy2266 146 PGS--F----GQRAETTLATNFFALVTVCHILFPLL 175 (313)
Q Consensus 146 ~~~--~----~~~~~~~~~~N~~g~~~~~~~~~p~l 175 (313)
..+ + .++|+.++++|+.|++.++++++|.|
T Consensus 97 ~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m 132 (274)
T d1xhla_ 97 ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHL 132 (274)
T ss_dssp CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ccccccccCCHHHHHHHHhhcccccccccccccccc
Confidence 443 2 26799999999999999999999987
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=98.37 E-value=2e-07 Score=82.50 Aligned_cols=97 Identities=18% Similarity=0.158 Sum_probs=76.9
Q ss_pred HHHHh-cccCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHc-CCccEEEeccCcCCCC
Q psy2266 76 HILFP-LLRPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYN-GPLDKILDTAMDTAPG 147 (313)
Q Consensus 76 ra~~~-~m~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~-G~lD~Linna~~~~~~ 147 (313)
++++. ++++|.+|+.+++....+++.. +.++ +...+|..++++++++++.+.+++ |.+|+|+||||....+
T Consensus 20 ~aia~~la~~G~~V~i~~r~~~~l~~~~-~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~idilinnag~~~~~ 98 (258)
T d1ae1a_ 20 YAIVEELAGLGARVYTCSRNEKELDECL-EIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHK 98 (258)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcEEEeccccccccC
Confidence 44443 4467888888887665544432 2222 124678889999999999999999 6899999999999888
Q ss_pred Ccc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 148 SFG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 148 ~~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++. ++|..++++|+.+++.++++++|
T Consensus 99 ~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~ 128 (258)
T d1ae1a_ 99 EAKDFTEKDYNIIMGTNFEAAYHLSQIAYP 128 (258)
T ss_dssp CTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccccCCHHHHhhhhhhcccccccccccccc
Confidence 874 79999999999999999999998
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.36 E-value=7.9e-08 Score=85.74 Aligned_cols=70 Identities=9% Similarity=0.199 Sum_probs=60.1
Q ss_pred CCHHHHHHHHHHHHHHcCCccEEEeccCcCC--CCCcc----hhhhhhhhcccccHHHHHHHHhhcccCCCceEEe
Q psy2266 115 LTEDQLLDMMTDYVQYNGPLDKILDTAMDTA--PGSFG----QRAETTLATNFFALVTVCHILFPLLRPHARVVNV 184 (313)
Q Consensus 115 ~~~~~~~~~~~~~~~~~G~lD~Linna~~~~--~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~v 184 (313)
.+....+++++.+.++||++|+||||||... .+++. ++|..++++|+++.+.++++++|.|+++|+++.+
T Consensus 101 ~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~g~~~~~ 176 (297)
T d1d7oa_ 101 SSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISL 176 (297)
T ss_dssp CCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcCCcceee
Confidence 4556678999999999999999999999853 45653 6899999999999999999999999988877664
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.29 E-value=3.9e-07 Score=80.14 Aligned_cols=116 Identities=12% Similarity=0.065 Sum_probs=84.0
Q ss_pred HHHHHHhcccCCceEEEEecccccccCCCchhh------h-hhhcccCCCHHHHHHHHHHHHH----HcCCccEEEeccC
Q psy2266 74 VCHILFPLLRPHARVVNVASKLGMLYNVPSQEL------R-QTLFNESLTEDQLLDMMTDYVQ----YNGPLDKILDTAM 142 (313)
Q Consensus 74 l~ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~------~-~~~~~d~~~~~~~~~~~~~~~~----~~G~lD~Linna~ 142 (313)
+.+.+++...+|.+||.+++....+.+...+-. + ....+|..++++++.+++.+.+ .++.+|+|+||||
T Consensus 22 iA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag 101 (259)
T d1oaaa_ 22 LAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAA 101 (259)
T ss_dssp HHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCC
T ss_pred HHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhhhhccCceEEEEeccc
Confidence 445555555678899998877665544422211 1 1246788899999999998877 3568999999999
Q ss_pred cCCC---CCcc----hhhhhhhhcccccHHHHHHHHhhcccCC-CceEEecCCcc
Q psy2266 143 DTAP---GSFG----QRAETTLATNFFALVTVCHILFPLLRPH-ARVVNVASKLG 189 (313)
Q Consensus 143 ~~~~---~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~-g~iv~vss~~~ 189 (313)
...+ +++. ++|+++|++|+.|++++++.++|+|++. +.-..+-...+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS 156 (259)
T d1oaaa_ 102 TLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS 156 (259)
T ss_dssp CCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECC
T ss_pred ccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccc
Confidence 7643 3332 6899999999999999999999999875 45555544443
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.19 E-value=6.2e-07 Score=77.87 Aligned_cols=88 Identities=13% Similarity=0.161 Sum_probs=63.9
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG---- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~---- 150 (313)
++++..+ ++|.+|+.+++....+.+.. .....+|..+ .++.+.+++|++|+||||||....+++.
T Consensus 18 ~aia~~l~~~Ga~V~~~~r~~~~l~~~~----~~~~~~Dv~~------~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~ 87 (234)
T d1o5ia_ 18 RAVADVLSQEGAEVTICARNEELLKRSG----HRYVVCDLRK------DLDLLFEKVKEVDILVLNAGGPKAGFFDELTN 87 (234)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHTC----SEEEECCTTT------CHHHHHHHSCCCSEEEECCCCCCCBCGGGCCH
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHhcC----CcEEEcchHH------HHHHHHHHhCCCcEEEecccccCCcchhhhhh
Confidence 4444444 56788888776543332221 1123444432 2667889999999999999998888864
Q ss_pred hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++|++++++|+.+++.++++++|
T Consensus 88 ~~~~~~~~~n~~~~~~~~~~~~~ 110 (234)
T d1o5ia_ 88 EDFKEAIDSLFLNMIKIVRNYLP 110 (234)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhhhhhhhhhcccc
Confidence 78999999999999999999999
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.06 E-value=2.2e-06 Score=75.75 Aligned_cols=98 Identities=15% Similarity=0.118 Sum_probs=75.7
Q ss_pred HHHHhc-ccCCceEEEEecccccccCCCchhhh-----h-hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPL-LRPHARVVNVASKLGMLYNVPSQELR-----Q-TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~-m~~~g~IV~isS~~~~~~~~~~~~~~-----~-~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++.. .++|.+||.+++....+.+...+... . ...+|..+.+..+...+.+.+.+|.+|+++||||....++
T Consensus 28 ~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~ 107 (269)
T d1xu9a_ 28 REMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN 107 (269)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCC
T ss_pred HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccccccc
Confidence 344433 35688999888876665544322111 1 1345667899999999999999999999999999987777
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
+. ++|+.++++|+.|++.+++.++|
T Consensus 108 ~~~~~~~~~~~~~~vN~~~~~~~~~~~lp 136 (269)
T d1xu9a_ 108 LFHDDIHHVRKSMEVNFLSYVVLTVAALP 136 (269)
T ss_dssp CCCSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccCCHHHhhhheeeehhhHHHHHHHHHH
Confidence 53 78999999999999999999998
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=97.99 E-value=2.3e-05 Score=68.64 Aligned_cols=41 Identities=10% Similarity=-0.002 Sum_probs=36.1
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG 150 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~ 150 (313)
..+|..+.++++++++.+.++||++|+||||||...+.++.
T Consensus 75 ~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~ 115 (284)
T d1e7wa_ 75 GSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLL 115 (284)
T ss_dssp -CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCC
T ss_pred ccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchh
Confidence 34677789999999999999999999999999998888764
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.90 E-value=6.9e-06 Score=71.62 Aligned_cols=94 Identities=13% Similarity=0.094 Sum_probs=68.2
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG---- 150 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~---- 150 (313)
++++..+ ++|.+||.++.....+.+...........+|..+ ++.++...+.++.+|+||||||....+++.
T Consensus 20 ~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~ 95 (245)
T d2ag5a1 20 QAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTK----KKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEE 95 (245)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTC----HHHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCH
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccc----cccccccccccccceeEEecccccCCCChhhCCH
Confidence 4455444 4577999888766555444222211223444444 345666777889999999999999888874
Q ss_pred hhhhhhhhcccccHHHHHHHHhh
Q psy2266 151 QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 151 ~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
++|+.++++|+.|++.++++++|
T Consensus 96 ~~~~~~~~vn~~~~~~~~~~~~~ 118 (245)
T d2ag5a1 96 KDWDFSMNLNVRSMYLMIKAFLP 118 (245)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccchhHHHhhCc
Confidence 69999999999999999999998
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.89 E-value=3.3e-06 Score=75.39 Aligned_cols=62 Identities=15% Similarity=0.173 Sum_probs=55.9
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhh
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFP 173 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p 173 (313)
..+|..+.++++++++.+.+ |.+|+|+||||....+++. ++|++++++|+.|+++++++++|
T Consensus 62 ~~~Dv~~~~~~~~~~~~~~~--g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp 127 (285)
T d1jtva_ 62 LQLDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLP 127 (285)
T ss_dssp EECCTTCHHHHHHHHHTCTT--SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EeccccchHhhhhhhhhccc--cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHH
Confidence 46788899999999988744 9999999999998888864 78999999999999999999999
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=97.79 E-value=1.3e-05 Score=71.24 Aligned_cols=109 Identities=12% Similarity=0.060 Sum_probs=82.0
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++....+.+...+... ....+|..++++++++++.+.+++|++|+|+||||.....+
T Consensus 39 ~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~ 118 (294)
T d1w6ua_ 39 KGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISP 118 (294)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSC
T ss_pred HHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccchhhhhhhhccccc
Confidence 4444444 5678888888766554433222111 12457888999999999999999999999999999988777
Q ss_pred cc----hhhhhhhhcccccHHHHHHHHhhcccCCCceEEe
Q psy2266 149 FG----QRAETTLATNFFALVTVCHILFPLLRPHARVVNV 184 (313)
Q Consensus 149 ~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~v 184 (313)
+. ++|..++.+|+.+.+.+++...+.+.....--.+
T Consensus 119 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i 158 (294)
T d1w6ua_ 119 TERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAF 158 (294)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred cccchhhhhhhheeeecccchhhhhhhhcccccccccccc
Confidence 64 6789999999999999999999988765544433
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=97.72 E-value=0.00015 Score=65.73 Aligned_cols=78 Identities=14% Similarity=0.167 Sum_probs=56.5
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCCChhHHHHHHHhHHHHHHHHHHHHHHhcc-cCC
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFGQRAETTLATNFFALVTVCHILFPLL-RPH 85 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~-~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m-~~~ 85 (313)
..++.++++|++|.++++++++.+ .+|+++|.|+..... .. ++.+..+++|+.++..|++++...- +..
T Consensus 54 ~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~v~h~aa~~~~~~~~----~~~~~~~~~Nv~gt~nllea~~~~~~~~~ 124 (357)
T d1db3a_ 54 NPKFHLHYGDLSDTSNLTRILREV-----QPDEVYNLGAMSHVAVSF----ESPEYTADVDAMGTLRLLEAIRFLGLEKK 124 (357)
T ss_dssp -CCEEECCCCSSCHHHHHHHHHHH-----CCSEEEECCCCCTTTTTT----SCHHHHHHHHTHHHHHHHHHHHHTTCTTT
T ss_pred CCCeEEEEeecCCHHHHHHHHhcc-----CCCEEEEeecccccchhh----hCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 346788899999999998887653 489999999986543 22 2334567899999999999876543 233
Q ss_pred ceEEEEecc
Q psy2266 86 ARVVNVASK 94 (313)
Q Consensus 86 g~IV~isS~ 94 (313)
.++|++||.
T Consensus 125 ~r~i~~SS~ 133 (357)
T d1db3a_ 125 TRFYQASTS 133 (357)
T ss_dssp CEEEEEEEG
T ss_pred cEEEEEEch
Confidence 466666663
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=97.55 E-value=2.2e-06 Score=71.98 Aligned_cols=85 Identities=9% Similarity=-0.108 Sum_probs=56.8
Q ss_pred ccCCceEEEEecccccccCCCchhhhh----hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhh
Q psy2266 82 LRPHARVVNVASKLGMLYNVPSQELRQ----TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTL 157 (313)
Q Consensus 82 m~~~g~IV~isS~~~~~~~~~~~~~~~----~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~ 157 (313)
.+.|.+++.+.+......+........ ...+|..+.++++++ ++++|+||||||........+.|+..+
T Consensus 44 a~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-------~~~iDilin~Ag~g~~~~~~e~~~~~~ 116 (191)
T d1luaa1 44 AGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEA-------VKGAHFVFTAGAIGLELLPQAAWQNES 116 (191)
T ss_dssp HHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHH-------TTTCSEEEECCCTTCCCBCHHHHHTCT
T ss_pred HhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHH-------hcCcCeeeecCccccccCCHHHHHhhh
Confidence 356788888887765554432221111 134566677766554 588999999999755445568999999
Q ss_pred hcccccHHHHHHHHhh
Q psy2266 158 ATNFFALVTVCHILFP 173 (313)
Q Consensus 158 ~~N~~g~~~~~~~~~p 173 (313)
.+|+.+.++.+..+.+
T Consensus 117 ~~nv~~~~~~~~~~~~ 132 (191)
T d1luaa1 117 SIEIVADYNAQPPLGI 132 (191)
T ss_dssp TCCEEEECCCSSSCSB
T ss_pred cceeehhHhhHHHHHH
Confidence 9999998876544433
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.50 E-value=3.1e-05 Score=68.17 Aligned_cols=106 Identities=26% Similarity=0.273 Sum_probs=87.3
Q ss_pred CceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc----chhhh
Q psy2266 85 HARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF----GQRAE 154 (313)
Q Consensus 85 ~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~----~~~~~ 154 (313)
+.+||...+......+. .+.++ ....+|..+.++++++++.+.+++|++|+||||||...+.++ .++|+
T Consensus 28 g~~Vi~~~r~~~~~~~~-~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~ 106 (275)
T d1wmaa1 28 SGDVVLTARDVTRGQAA-VQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAE 106 (275)
T ss_dssp SSEEEEEESSHHHHHHH-HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHH
T ss_pred CCEEEEEECCHHHHHHH-HHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHH
Confidence 56777777665554332 22222 124678889999999999999999999999999999776665 36899
Q ss_pred hhhhcccccHHHHHHHHhhcccCCCceEEecCCcccc
Q psy2266 155 TTLATNFFALVTVCHILFPLLRPHARVVNVASKLGML 191 (313)
Q Consensus 155 ~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~ 191 (313)
.+|++|++|++++++.++|.|+++|+||++||..+..
T Consensus 107 ~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~ 143 (275)
T d1wmaa1 107 VTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVR 143 (275)
T ss_dssp HHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceec
Confidence 9999999999999999999999999999999999865
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=97.50 E-value=7.5e-05 Score=65.11 Aligned_cols=71 Identities=8% Similarity=-0.017 Sum_probs=48.1
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh------hhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCC
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR------QTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGS 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~ 148 (313)
++++..+ ++|.+|+.+++..... +. ..++. ....+|..++++.+++++++.+++|++|+|++|+|.....+
T Consensus 21 ~AiA~~la~~Ga~V~i~~r~~~~~-~~-~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~ 98 (274)
T d2pd4a1 21 YGIAQSCFNQGATLAFTYLNESLE-KR-VRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEA 98 (274)
T ss_dssp HHHHHHHHTTTCEEEEEESSTTTH-HH-HHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGG
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHH-HH-HHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCCCeEEeecccccccc
Confidence 4444444 5688888877643211 11 11111 11355778999999999999999999999999999865543
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=97.48 E-value=5.2e-05 Score=65.78 Aligned_cols=163 Identities=13% Similarity=0.085 Sum_probs=118.7
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhh---hhhcccCCCHHHHHHHHHHHHHHc---CCccEEEeccCcCCCC-
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELR---QTLFNESLTEDQLLDMMTDYVQYN---GPLDKILDTAMDTAPG- 147 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~---G~lD~Linna~~~~~~- 147 (313)
++++..+ ++|.+|+++........+...+..+ ....+|..++++..++.+.+.+.+ +.+|+++||||.....
T Consensus 22 ~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~ 101 (268)
T d2h7ma1 22 FHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTG 101 (268)
T ss_dssp HHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGG
T ss_pred HHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccccCCCcceeeecccccCccc
Confidence 3444444 5688888876554432111111111 224678889999999988887765 6899999999965322
Q ss_pred ----Cc----chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHHHHHHHHH
Q psy2266 148 ----SF----GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTD 219 (313)
Q Consensus 148 ----~~----~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (313)
++ .+.|...+.+|+.+.+...+...|.+.+++.|+.+++.....
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~---------------------------- 153 (268)
T d2h7ma1 102 MGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA---------------------------- 153 (268)
T ss_dssp STTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC----------------------------
T ss_pred cccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccccc----------------------------
Confidence 22 257788999999999999999999887766665555444322
Q ss_pred HHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccccccc
Q psy2266 220 YVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283 (313)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~~~~ 283 (313)
.+....|+++|+|+.+|+|+++.+++++ |||||+|+||+|+|++.+.
T Consensus 154 -------------~p~~~~y~~sK~a~~~ltr~lA~e~~~~----gIrVN~V~PG~v~T~~~~~ 200 (268)
T d2h7ma1 154 -------------MPAYNWMTVAKSALESVNRFVAREAGKY----GVRSNLVAAGPIRTLAMSA 200 (268)
T ss_dssp -------------CTTTHHHHHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECCCCCHHHHH
T ss_pred -------------Ccccchhhccccchhhccccchhhhhcc----CCcceEEecCCCCChhhhh
Confidence 2234569999999999999999999877 9999999999999998754
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=97.47 E-value=0.00049 Score=61.36 Aligned_cols=76 Identities=13% Similarity=0.122 Sum_probs=50.7
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
+.++.++++|++|.+.+.++++. .++|++||.|+..... ...++-...+++|+.++..+++++...- -.+
T Consensus 49 ~~~~~~~~~Dl~d~~~l~~~~~~-----~~~d~ViHlAa~~~~~---~~~~~~~~~~~~Nv~gt~nlL~~~~~~~--v~~ 118 (338)
T d1udca_ 49 GKHPTFVEGDIRNEALMTEILHD-----HAIDTVIHFAGLKAVG---ESVQKPLEYYDNNVNGTLRLISAMRAAN--VKN 118 (338)
T ss_dssp TSCCEEEECCTTCHHHHHHHHHH-----TTCSEEEECCSCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHHT--CCE
T ss_pred CCCCEEEEeecCCHHHHHHHHhc-----cCCCEEEECCCccchh---hHHhCHHHHHHhHHHHHHHHHHHHHHhC--CCE
Confidence 34678899999999888777664 3589999999964311 1113445678888888888877665431 134
Q ss_pred EEEEec
Q psy2266 88 VVNVAS 93 (313)
Q Consensus 88 IV~isS 93 (313)
+|++||
T Consensus 119 ~i~~Ss 124 (338)
T d1udca_ 119 FIFSSS 124 (338)
T ss_dssp EEEEEE
T ss_pred EEecCc
Confidence 555554
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.36 E-value=0.00047 Score=62.64 Aligned_cols=68 Identities=15% Similarity=0.029 Sum_probs=49.2
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
+.++.++++|+.|.+.++++++.. ++|+++|.|+.........-.+.....+++|+.++..+.+++..
T Consensus 66 ~~~i~~~~~Dl~d~~~l~~~~~~~-----~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~ 133 (393)
T d1i24a_ 66 GKSIELYVGDICDFEFLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKE 133 (393)
T ss_dssp CCCCEEEESCTTSHHHHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEccCCCHHHHHHHHHhh-----cchheeccccccccccccccccccccccccccccccHHHHHHHH
Confidence 456788999999999998887754 69999999987653211111244556778888888888876554
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=97.12 E-value=0.00016 Score=63.06 Aligned_cols=72 Identities=7% Similarity=-0.032 Sum_probs=48.4
Q ss_pred HHhHHHHHHHHHHHHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEecc
Q psy2266 63 TLATNFFALVTVCHILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTA 141 (313)
Q Consensus 63 ~~~vNl~~~i~l~ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna 141 (313)
.+.--+...-.+.+.+...- .++|+||+++|..+...... ...+...+.++..+++.+...+++..+.+|+.
T Consensus 107 Nl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~-------~~~Y~asKaal~~~t~~la~el~~~gIrVn~I 179 (254)
T d1sbya1 107 NFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ-------VPVYSASKAAVVSFTNSLAKLAPITGVTAYSI 179 (254)
T ss_dssp HTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT-------SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEE
T ss_pred HhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCC-------CHHHHHHHHHHHHHHHHHHhhccccCeEEEEE
Confidence 33334444445555554432 35799999999998764442 22344577888999999999998877887774
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.04 E-value=0.00043 Score=59.37 Aligned_cols=102 Identities=11% Similarity=-0.021 Sum_probs=75.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhh---hhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc--
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQ---TLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF-- 149 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~-- 149 (313)
++++..+ ++|.+|+.++......... .++++. ...++..+....++....+...++.+|.+++|++....+++
T Consensus 19 ~aia~~la~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (248)
T d2o23a1 19 LATAERLVGQGASAVLLDLPNSGGEAQ-AKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYN 97 (248)
T ss_dssp HHHHHHHHHTTCEEEEEECTTSSHHHH-HHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEE
T ss_pred HHHHHHHHHCCCEEEEEeCChHHHHHH-HHHhCCCcccccccccccccccccccccccccccccccccccccccCCCccc
Confidence 3444434 5678888777655443322 222222 24567779999999999999999999999999987655543
Q ss_pred --------chhhhhhhhcccccHHHHHHHHhhcccCC
Q psy2266 150 --------GQRAETTLATNFFALVTVCHILFPLLRPH 178 (313)
Q Consensus 150 --------~~~~~~~~~~N~~g~~~~~~~~~p~l~~~ 178 (313)
.+.|+.++++|+.|++++++++.|.|...
T Consensus 98 ~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~ 134 (248)
T d2o23a1 98 LKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQN 134 (248)
T ss_dssp TTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred ccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHh
Confidence 26899999999999999999999998753
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.76 E-value=0.0043 Score=55.07 Aligned_cols=77 Identities=16% Similarity=0.225 Sum_probs=49.9
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.++.++++|+.|.++++++++. + ++|+++|+|+..... ...+.-.....+|+.++..+.+++...- -.++
T Consensus 51 ~~v~~~~~Dl~d~~~l~~~~~~----~-~~d~VihlAa~~~~~---~~~~~~~~~~~~N~~~t~~ll~~~~~~~--i~~~ 120 (347)
T d1z45a2 51 HHIPFYEVDLCDRKGLEKVFKE----Y-KIDSVIHFAGLKAVG---ESTQIPLRYYHNNILGTVVLLELMQQYN--VSKF 120 (347)
T ss_dssp SCCCEEECCTTCHHHHHHHHHH----S-CCCEEEECCSCCCHH---HHHHSHHHHHHHHHHHHHHHHHHHHHHT--CCEE
T ss_pred cCCeEEEeecCCHHHHHHHHhc----c-CCCEEEEcccccccc---ccccCcccccccchhhhHHHHHHHHhcc--cceE
Confidence 4577889999999988876653 2 599999999975421 1113334566788888887777754321 1245
Q ss_pred EEEeccc
Q psy2266 89 VNVASKL 95 (313)
Q Consensus 89 V~isS~~ 95 (313)
|++||..
T Consensus 121 i~~SS~~ 127 (347)
T d1z45a2 121 VFSSSAT 127 (347)
T ss_dssp EEEEEGG
T ss_pred Eeeccee
Confidence 5555533
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=96.75 E-value=0.0055 Score=53.28 Aligned_cols=130 Identities=12% Similarity=0.053 Sum_probs=78.8
Q ss_pred cCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc-chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCcccc
Q psy2266 113 ESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF-GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGML 191 (313)
Q Consensus 113 d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~-~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~ 191 (313)
+..+.+.+.++++. ..+|+++++|+....... .++-...+++|+.|+..+.+++... .-.++|++||.+...
T Consensus 39 ~~~~~~~~~~~~~~-----~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~--~v~~~i~~SS~~vyg 111 (315)
T d1e6ua_ 39 NLLDSRAVHDFFAS-----ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSSCIYP 111 (315)
T ss_dssp CTTCHHHHHHHHHH-----HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGSC
T ss_pred cccCHHHHHHHHhh-----cCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECCceEcC
Confidence 45567666665542 368999999876542221 2344556889999998887776541 125799999988654
Q ss_pred ccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEee
Q psy2266 192 YNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPV 271 (313)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v 271 (313)
...+. . ++++.. ......++...|+.||.+.+.+++.++++. |+++..+
T Consensus 112 ~~~~~-~---------~~E~~~--------------~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------gl~~~il 160 (315)
T d1e6ua_ 112 KLAKQ-P---------MAESEL--------------LQGTLEPTNEPYAIAKIAGIKLCESYNRQY-------GRDYRSV 160 (315)
T ss_dssp TTCCS-S---------BCGGGT--------------TSSCCCGGGHHHHHHHHHHHHHHHHHHHHH-------CCEEEEE
T ss_pred CCCCC-C---------ccCCcc--------------ccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-------CCCEEEE
Confidence 22111 0 000000 000012223359999999999996665442 7888888
Q ss_pred ccccccccc
Q psy2266 272 HPGYVNTDL 280 (313)
Q Consensus 272 ~PG~v~T~~ 280 (313)
-|+.|--|.
T Consensus 161 R~~~vyGp~ 169 (315)
T d1e6ua_ 161 MPTNLYGPH 169 (315)
T ss_dssp EECEEESTT
T ss_pred eeccEECCC
Confidence 888775543
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=96.66 E-value=0.00082 Score=57.81 Aligned_cols=119 Identities=11% Similarity=0.079 Sum_probs=98.2
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcc----hhhhhhhhcccccHHHHHHHHhhcccCCCceEEec
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFG----QRAETTLATNFFALVTVCHILFPLLRPHARVVNVA 185 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~----~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vs 185 (313)
..+|..|.++++++++.+.+ .+++|+++||||....+++. ++|+.++++|+.|.+.+.+.+.+ .+.++||++|
T Consensus 67 ~~~Dv~d~~~~~~~~~~i~~-~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~--~~~~~iv~~S 143 (259)
T d2fr1a1 67 AACDVTDRESVRELLGGIGD-DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE--LDLTAFVLFS 143 (259)
T ss_dssp EECCTTCHHHHHHHHHTSCT-TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT--SCCSEEEEEE
T ss_pred cccccchHHHHHHhhccccc-cccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhc--cCCceEeeec
Confidence 46788899999999998755 57999999999999988874 67899999999999999887655 3458999999
Q ss_pred CCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCC
Q psy2266 186 SKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPD 265 (313)
Q Consensus 186 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~g 265 (313)
|.++.. +..+..+|+++|+++..|+ .++..+ |
T Consensus 144 S~a~~~----------------------------------------g~~~~~~YaAaka~l~~la----~~~~~~----G 175 (259)
T d2fr1a1 144 SFASAF----------------------------------------GAPGLGGYAPGNAYLDGLA----QQRRSD----G 175 (259)
T ss_dssp EHHHHT----------------------------------------CCTTCTTTHHHHHHHHHHH----HHHHHT----T
T ss_pred chhhcc----------------------------------------CCcccHHHHHHHHhHHHHH----HHHHhC----C
Confidence 999976 2345567999999999988 555555 9
Q ss_pred eEEEeecccccccc
Q psy2266 266 IIVNPVHPGYVNTD 279 (313)
Q Consensus 266 I~vn~v~PG~v~T~ 279 (313)
|++++|+||.+.++
T Consensus 176 i~v~~I~pg~~~~~ 189 (259)
T d2fr1a1 176 LPATAVAWGTWAGS 189 (259)
T ss_dssp CCCEEEEECCBC--
T ss_pred CCEEECCCCcccCC
Confidence 99999999988644
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=96.61 E-value=0.0014 Score=59.11 Aligned_cols=139 Identities=11% Similarity=0.031 Sum_probs=85.5
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccC-------CCceEE
Q psy2266 111 FNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP-------HARVVN 183 (313)
Q Consensus 111 ~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~-------~g~iv~ 183 (313)
..|..+.+.++.+++. + .+|+++|+|+........++-...+++|+.|+..+.+++...-.. ..++|+
T Consensus 56 ~~Dl~d~~~l~~~~~~----~-~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~ 130 (361)
T d1kewa_ 56 HADICDSAEITRIFEQ----Y-QPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHH 130 (361)
T ss_dssp ECCTTCHHHHHHHHHH----H-CCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEE
T ss_pred EccCCCHHHHHHHHHh----C-CCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEE
Confidence 4577788877666543 2 699999999865433334455678999999999999887764321 258999
Q ss_pred ecCCccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCC
Q psy2266 184 VASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRR 263 (313)
Q Consensus 184 vss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~ 263 (313)
+||.+..-.................. + .....+...|+.||.+...+++.++...
T Consensus 131 ~SS~~vyg~~~~~~~~~~~~~~~~~~------------------e-~~~~~p~s~Yg~sK~~~E~~~~~~~~~~------ 185 (361)
T d1kewa_ 131 ISTDEVYGDLPHPDEVENSVTLPLFT------------------E-TTAYAPSSPYSASKASSDHLVRAWRRTY------ 185 (361)
T ss_dssp EEEGGGGCCCCCGGGSCTTSCCCCBC------------------T-TSCCCCCSHHHHHHHHHHHHHHHHHHHH------
T ss_pred eccceeeCCCccCCccccccCCCCcc------------------c-CCCCCCCCHHHHHHHHHHHHHHHHHHHh------
Confidence 99977543211100000000000000 0 0012234459999999999996655442
Q ss_pred CCeEEEeeccccccccc
Q psy2266 264 PDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 264 ~gI~vn~v~PG~v~T~~ 280 (313)
|+.+.++.|+.|--|.
T Consensus 186 -~i~~~~lR~~~vyGp~ 201 (361)
T d1kewa_ 186 -GLPTIVTNCSNNYGPY 201 (361)
T ss_dssp -CCCEEEEEECEEESTT
T ss_pred -CCCEEEEecCceECcC
Confidence 6888888888776553
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=96.55 E-value=0.0097 Score=53.40 Aligned_cols=65 Identities=9% Similarity=0.158 Sum_probs=47.2
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
....++++|++|.+.++++++ .++++|+++|.|+..... ...+.....+++|..+...+++++..
T Consensus 69 ~~~~~~~~Di~d~~~l~~~~~----~~~~~d~ViH~Aa~~~~~---~~~~~~~~~~~~N~~~t~~~l~~~~~ 133 (383)
T d1gy8a_ 69 RYAALEVGDVRNEDFLNGVFT----RHGPIDAVVHMCAFLAVG---ESVRDPLKYYDNNVVGILRLLQAMLL 133 (383)
T ss_dssp CCCEEEESCTTCHHHHHHHHH----HSCCCCEEEECCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEECcccCHHHhhhhhh----ccceeehhhccccccccc---ccccccccccccccccccccchhhhc
Confidence 346788999999988777665 456799999999876532 11144456677888888888777654
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.48 E-value=0.018 Score=50.39 Aligned_cols=79 Identities=11% Similarity=0.047 Sum_probs=53.6
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhccc-CCce
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLR-PHAR 87 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~-~~g~ 87 (313)
.++.++++|+.|.+.+.++++.. .++++++.|+..... ...+.....+++|+.++..+..++...-. +..+
T Consensus 56 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~v~~~~a~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~ 127 (347)
T d1t2aa_ 56 GNMKLHYGDLTDSTCLVKIINEV-----KPTEIYNLGAQSHVK---ISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVK 127 (347)
T ss_dssp -CEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHH---HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCE
T ss_pred CCcEEEEeecCCchhhHHHHhhc-----ccceeeeeeeccccc---hhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcE
Confidence 35678999999999887777542 578888888764421 11144455678999999999888766433 2346
Q ss_pred EEEEeccc
Q psy2266 88 VVNVASKL 95 (313)
Q Consensus 88 IV~isS~~ 95 (313)
+|++||.+
T Consensus 128 ~i~~SS~~ 135 (347)
T d1t2aa_ 128 FYQASTSE 135 (347)
T ss_dssp EEEEEEGG
T ss_pred EEEecchh
Confidence 66666643
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.39 E-value=0.0015 Score=57.67 Aligned_cols=115 Identities=13% Similarity=0.008 Sum_probs=73.1
Q ss_pred CCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchH
Q psy2266 132 GPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTED 211 (313)
Q Consensus 132 G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (313)
.++|+++|+|+........++....+++|+.|+..+++++.. .+.++|++||.+..... ..... .++.
T Consensus 64 ~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~---~~~k~I~~SS~~vy~~~-~~~~~-----~e~~--- 131 (312)
T d2b69a1 64 IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKR---VGARLLLASTSEVYGDP-EVHPQ-----SEDY--- 131 (312)
T ss_dssp CCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHH---HTCEEEEEEEGGGGBSC-SSSSB-----CTTC---
T ss_pred cCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHH---cCCcEEEEEChheecCC-CCCCC-----Cccc---
Confidence 469999999986554333455567889999999999887643 23579999987654311 00000 0000
Q ss_pred HHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 212 QLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
-....+..+...|+.||.+...+++..++.. |+.+..+.|+.|--|.
T Consensus 132 ---------------~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~~lR~~~vyGp~ 178 (312)
T d2b69a1 132 ---------------WGHVNPIGPRACYDEGKRVAETMCYAYMKQE-------GVEVRVARIFNTFGPR 178 (312)
T ss_dssp ---------------CCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECCEECTT
T ss_pred ---------------cCCCCCCCCccHHHHHHHHHHHHHHHHHHHh-------CCcEEEEEeeeEECCC
Confidence 0000012344459999999999996655542 6888888888886553
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=96.09 E-value=0.0025 Score=54.39 Aligned_cols=75 Identities=19% Similarity=0.024 Sum_probs=49.1
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhh-------h----cccCCCHHHHHHHHHHHHHHcCCccEEEeccCc
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQT-------L----FNESLTEDQLLDMMTDYVQYNGPLDKILDTAMD 143 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~-------~----~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~ 143 (313)
++++..+ ++|.+||.+++......+.-.+++... . ..+...++.++++++.+.+++|++|+|+||||.
T Consensus 15 ~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~ 94 (266)
T d1mxha_ 15 HSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASA 94 (266)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 4454444 568888888866543322111122110 1 123345678999999999999999999999999
Q ss_pred CCCCCcc
Q psy2266 144 TAPGSFG 150 (313)
Q Consensus 144 ~~~~~~~ 150 (313)
..+.++.
T Consensus 95 ~~~~~~~ 101 (266)
T d1mxha_ 95 YYPTPLL 101 (266)
T ss_dssp CCCCCSC
T ss_pred CCCCccc
Confidence 8877753
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=96.01 E-value=0.012 Score=51.94 Aligned_cols=69 Identities=12% Similarity=0.083 Sum_probs=44.0
Q ss_pred EEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEec
Q psy2266 14 HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVAS 93 (313)
Q Consensus 14 ~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS 93 (313)
+..|++|.+++.+++ -.+|+++|+|+..... ......++.|+.++..+.+++... +.-.++|++||
T Consensus 67 ~~~Dl~~~~~~~~~~-------~~~~~v~~~a~~~~~~------~~~~~~~~~nv~gt~~ll~~~~~~-~~v~~~i~~SS 132 (342)
T d1y1pa1 67 VVEDMLKQGAYDEVI-------KGAAGVAHIASVVSFS------NKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSS 132 (342)
T ss_dssp ECSCTTSTTTTTTTT-------TTCSEEEECCCCCSCC------SCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECC
T ss_pred Eeccccchhhhhhhc-------ccchhhhhhccccccc------ccccccccchhhhHHHHHHhhhcc-ccccccccccc
Confidence 456777766554433 3589999999875422 112345677888988888876663 22357777777
Q ss_pred ccc
Q psy2266 94 KLG 96 (313)
Q Consensus 94 ~~~ 96 (313)
...
T Consensus 133 ~~~ 135 (342)
T d1y1pa1 133 TVS 135 (342)
T ss_dssp GGG
T ss_pred cee
Confidence 543
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=95.76 E-value=0.0076 Score=51.25 Aligned_cols=99 Identities=10% Similarity=0.023 Sum_probs=74.8
Q ss_pred CCCcEEEECCCCCCCC-CCCChh-HHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEecccccccCCCchhhhhhhccc
Q psy2266 36 GGLDLLVNNAGIYRDT-APGSFG-QRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNE 113 (313)
Q Consensus 36 g~iDilVnNAGi~~~~-~~~~~~-~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d 113 (313)
.-++....+.+..... ..+... +.|...+++|+.+.+.+++++.+.|++++.||++||..+...... ...+
T Consensus 86 ~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~-------~~~Y 158 (258)
T d1qsga_ 86 GFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN-------YNVM 158 (258)
T ss_dssp EEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT-------TTHH
T ss_pred eEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCC-------cHHH
Confidence 3444444444444333 223333 889999999999999999999999999999999999886654332 2234
Q ss_pred CCCHHHHHHHHHHHHHHcCCccEEEecc
Q psy2266 114 SLTEDQLLDMMTDYVQYNGPLDKILDTA 141 (313)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~G~lD~Linna 141 (313)
...+.++..+++.++..+++-.+.+|+.
T Consensus 159 ~~sKaal~~ltr~lA~el~~~gIrVN~I 186 (258)
T d1qsga_ 159 GLAKASLEANVRYMANAMGPEGVRVNAI 186 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCccCceeecc
Confidence 5678889999999999999999999986
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=95.74 E-value=0.033 Score=48.99 Aligned_cols=74 Identities=20% Similarity=0.200 Sum_probs=48.0
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCce
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHAR 87 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~ 87 (313)
+.++.++.+|+.|.+.+.+++ ...|.++|.|+..... ....+....+++|+.+...++.++... +.+
T Consensus 51 ~~~i~~~~~Di~d~~~~~~~~-------~~~~~v~~~a~~~~~~---~~~~~~~~~~~~N~~g~~nll~~~~~~---~~k 117 (346)
T d1oc2a_ 51 GDRVELVVGDIADAELVDKLA-------AKADAIVHYAAESHND---NSLNDPSPFIHTNFIGTYTLLEAARKY---DIR 117 (346)
T ss_dssp SSSEEEEECCTTCHHHHHHHH-------TTCSEEEECCSCCCHH---HHHHCCHHHHHHHTHHHHHHHHHHHHH---TCE
T ss_pred cCCeEEEEccCCCHHHHHHHH-------hhhhhhhhhhhccccc---chhhCcccceeeehHhHHhhhhhhccc---ccc
Confidence 456788999999988776653 3578889998776532 111333456778888888877655433 234
Q ss_pred EEEEecc
Q psy2266 88 VVNVASK 94 (313)
Q Consensus 88 IV~isS~ 94 (313)
+|+++|.
T Consensus 118 ~i~~ss~ 124 (346)
T d1oc2a_ 118 FHHVSTD 124 (346)
T ss_dssp EEEEEEG
T ss_pred ccccccc
Confidence 5555554
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.62 E-value=0.028 Score=49.64 Aligned_cols=133 Identities=14% Similarity=0.048 Sum_probs=80.9
Q ss_pred hcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCc-chhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCc
Q psy2266 110 LFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF-GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKL 188 (313)
Q Consensus 110 ~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~-~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~ 188 (313)
...|..+.++.... ..++|+++++|+....... .+.....+.+|+.|+..++.++.-. .-.++|++||..
T Consensus 63 ~~~D~~~~~~~~~~-------~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~--~vk~~i~~SS~~ 133 (363)
T d2c5aa1 63 HLVDLRVMENCLKV-------TEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN--GIKRFFYASSAC 133 (363)
T ss_dssp EECCTTSHHHHHHH-------HTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEGG
T ss_pred EEeechhHHHHHHH-------hhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhh--Cccccccccccc
Confidence 34455555543332 2378999999987655443 4667788999999998887776541 125799999977
Q ss_pred cccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEE
Q psy2266 189 GMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIV 268 (313)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~v 268 (313)
.......... ......+ .......+...|+.||.+...+++.+++.. |+.+
T Consensus 134 ~~~~~~~~~~-----~~~~~~~-----------------~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~-------gl~~ 184 (363)
T d2c5aa1 134 IYPEFKQLET-----TNVSLKE-----------------SDAWPAEPQDAFGLEKLATEELCKHYNKDF-------GIEC 184 (363)
T ss_dssp GSCGGGSSSS-----SSCEECG-----------------GGGSSBCCSSHHHHHHHHHHHHHHHHHHHH-------CCEE
T ss_pred cccccccccc-----ccccccc-----------------ccCCcCCCCCHHHHHHHHHHHHHHHHHHHh-------CCCE
Confidence 6432211100 0000000 001112334569999999999986555442 6888
Q ss_pred Eeeccccccccc
Q psy2266 269 NPVHPGYVNTDL 280 (313)
Q Consensus 269 n~v~PG~v~T~~ 280 (313)
..+-|+.+-.+.
T Consensus 185 ~ilR~~~vyG~~ 196 (363)
T d2c5aa1 185 RIGRFHNIYGPF 196 (363)
T ss_dssp EEEEECCEECTT
T ss_pred EEEEeeeEeccC
Confidence 888888776553
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=95.62 E-value=0.012 Score=51.51 Aligned_cols=113 Identities=19% Similarity=0.047 Sum_probs=76.8
Q ss_pred HHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhcccc
Q psy2266 129 QYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESL 208 (313)
Q Consensus 129 ~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~ 208 (313)
...-..|+++++|+........+..+..+++|+.|+..+.+++.-. +-.++|+.||....... .... +
T Consensus 72 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~--~~~~~I~~Ss~~~yg~~-~~~~---------~ 139 (322)
T d1r6da_ 72 RELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA--GVGRVVHVSTNQVYGSI-DSGS---------W 139 (322)
T ss_dssp HHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT--TCCEEEEEEEGGGGCCC-SSSC---------B
T ss_pred ccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc--CCceEEEeecceeecCC-CCCC---------C
Confidence 3456889999999876655555677788999999999998877531 12579999887654311 0000 0
Q ss_pred chHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeecccccccc
Q psy2266 209 TEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTD 279 (313)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~ 279 (313)
++ .....+...|+.||.+...+++.++++. |+.+..+-|+.|--|
T Consensus 140 ~E-------------------~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~~lR~~~vyGp 184 (322)
T d1r6da_ 140 TE-------------------SSPLEPNSPYAASKAGSDLVARAYHRTY-------GLDVRITRCCNNYGP 184 (322)
T ss_dssp CT-------------------TSCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECEEECT
T ss_pred CC-------------------CCCCCCCCHHHHHHHHHHHHHHHHHHHh-------CCCEEEEEeeeEECc
Confidence 00 1123344569999999999996665542 688888888877654
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=95.36 E-value=0.0027 Score=52.32 Aligned_cols=53 Identities=11% Similarity=0.013 Sum_probs=38.3
Q ss_pred eeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHH
Q psy2266 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVT 73 (313)
Q Consensus 11 ~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~ 73 (313)
+....+|+++.++++++ ++++|+||||||+... ....+.|+..+++|+.+.+.
T Consensus 73 ~~~~~~d~~~~~~~~~~-------~~~iDilin~Ag~g~~---~~~~e~~~~~~~~nv~~~~~ 125 (191)
T d1luaa1 73 VNVTAAETADDASRAEA-------VKGAHFVFTAGAIGLE---LLPQAAWQNESSIEIVADYN 125 (191)
T ss_dssp CCCEEEECCSHHHHHHH-------TTTCSEEEECCCTTCC---CBCHHHHHTCTTCCEEEECC
T ss_pred hhhhhhhcccHHHHHHH-------hcCcCeeeecCccccc---cCCHHHHHhhhcceeehhHh
Confidence 44577999998877654 5789999999997532 12338888888887755543
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.31 E-value=0.082 Score=46.13 Aligned_cols=64 Identities=20% Similarity=0.300 Sum_probs=44.8
Q ss_pred CCceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHH
Q psy2266 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILF 79 (313)
Q Consensus 8 g~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~ 79 (313)
+.++.++++|+.|.+.+++++.. ..+|+++|.|+..... ...+.-...+++|+.++..+.+++.
T Consensus 57 ~~~~~~~~~Dl~d~~~l~~~~~~-----~~~~~i~h~Aa~~~~~---~~~~~p~~~~~~Nv~gt~~l~~~~~ 120 (346)
T d1ek6a_ 57 GRSVEFEEMDILDQGALQRLFKK-----YSFMAVIHFAGLKAVG---ESVQKPLDYYRVNLTGTIQLLEIMK 120 (346)
T ss_dssp TCCCEEEECCTTCHHHHHHHHHH-----CCEEEEEECCSCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeeccccccccccccc-----cccccccccccccCcH---hhHhCHHHHHHhhhcccccccchhh
Confidence 34578899999999888776653 4688999999875421 1113345667888888877777654
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.03 E-value=0.07 Score=45.88 Aligned_cols=64 Identities=11% Similarity=0.033 Sum_probs=41.3
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
.++.++.+|++|.+++.+++... ..++++++|+..... ...+.....+++|..++..+++++..
T Consensus 49 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~~~~~a~~~~~~---~~~~~~~~~~~~n~~g~~~~l~~~~~ 112 (321)
T d1rpna_ 49 GDIQYEDGDMADACSVQRAVIKA-----QPQEVYNLAAQSFVG---ASWNQPVTTGVVDGLGVTHLLEAIRQ 112 (321)
T ss_dssp GGEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHH---HHTTSHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCcEEEEccccChHHhhhhhccc-----ccccccccccccccc---ccccchHHHHhhhhhchHHHHHHHHH
Confidence 35778899999988877666542 467888888664422 11123345667777777776665543
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=94.92 E-value=0.053 Score=45.45 Aligned_cols=100 Identities=12% Similarity=0.140 Sum_probs=69.7
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHH-cCCccEEEeccCcCCCCCcchhh
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQY-NGPLDKILDTAMDTAPGSFGQRA 153 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~G~lD~Linna~~~~~~~~~~~~ 153 (313)
++++..+ ++|.+|+.++..... ..++..+.++.+....+...+ .+.+|+++||||... ..+.|
T Consensus 15 ~aiA~~la~~Ga~V~~~~~~~~~------------~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~---~~~~~ 79 (257)
T d1fjha_ 15 AATRKVLEAAGHQIVGIDIRDAE------------VIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP---QTKVL 79 (257)
T ss_dssp HHHHHHHHHTTCEEEEEESSSSS------------EECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT---TCSSH
T ss_pred HHHHHHHHHCCCEEEEEECChHH------------HHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCC---cHHHH
Confidence 4455444 457788777654322 234556777777665555544 568999999998643 34567
Q ss_pred hhhhhcccccHHHHHHHHhhcccCC--CceEEecCCccc
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRPH--ARVVNVASKLGM 190 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~~--g~iv~vss~~~~ 190 (313)
...+.+|+.+...+.+..+|.+.+. ..+.++++....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (257)
T d1fjha_ 80 GNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA 118 (257)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeecccc
Confidence 8889999999999999999988664 566777666543
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=94.81 E-value=0.024 Score=49.68 Aligned_cols=116 Identities=11% Similarity=0.029 Sum_probs=69.9
Q ss_pred CccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccchHH
Q psy2266 133 PLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQ 212 (313)
Q Consensus 133 ~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (313)
.+|+++++|+........+.-...+.+|+.|+..+.+.+.- .+.+.+++||............ .. .....
T Consensus 67 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~---~~~~~~~~ss~~~~~~~~~~~~-~~--~~~~~---- 136 (342)
T d2blla1 67 KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVK---YRKRIIFPSTSEVYGMCSDKYF-DE--DHSNL---- 136 (342)
T ss_dssp HCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHH---TTCEEEEECCGGGGBTCCCSSB-CT--TTCCC----
T ss_pred CCCccccccccccccccccCCcccccccccccccccccccc---cccccccccccccccccccccc-cc--ccccc----
Confidence 48999999997655554555567899999999998888642 3456677766554332111100 00 00000
Q ss_pred HHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 213 LLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
.......+...|+.||.+.+.+++.+++.. |+.+..+.|..+-.+.
T Consensus 137 ---------------~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~i~r~~~~~g~~ 182 (342)
T d2blla1 137 ---------------IVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-------GLQFTLFRPFNWMGPR 182 (342)
T ss_dssp ---------------BCCCTTCGGGHHHHHHHHHHHHHHHHHHHH-------CCCEEEEEECSEECSS
T ss_pred ---------------cccccCCCcchhhhcccchhhhhhhhhccc-------CceeEEeecccccccc
Confidence 000011233459999999999996655543 6777777777666553
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.77 E-value=0.088 Score=42.71 Aligned_cols=36 Identities=19% Similarity=0.228 Sum_probs=27.8
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~ 51 (313)
..+.++.+|++|.+++.++++ ..|++|+++|.....
T Consensus 46 ~~~~~~~gD~~d~~~l~~al~-------~~d~vi~~~g~~~~~ 81 (205)
T d1hdoa_ 46 RPAHVVVGDVLQAADVDKTVA-------GQDAVIVLLGTRNDL 81 (205)
T ss_dssp CCSEEEESCTTSHHHHHHHHT-------TCSEEEECCCCTTCC
T ss_pred cccccccccccchhhHHHHhc-------CCCEEEEEeccCCch
Confidence 457889999999988766543 579999999975533
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=94.50 E-value=0.12 Score=43.39 Aligned_cols=96 Identities=14% Similarity=0.087 Sum_probs=63.4
Q ss_pred HHHHHhcccCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhh
Q psy2266 75 CHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAE 154 (313)
Q Consensus 75 ~ra~~~~m~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~ 154 (313)
-+++.+.+.+.|.+|.+...... ...|..+.+++++.++.. ++|+++|+||........+.-.
T Consensus 13 G~~l~~~L~~~g~~v~~~~~~~~------------~~~Dl~~~~~~~~~i~~~-----~~D~Vih~Aa~~~~~~~~~~~~ 75 (298)
T d1n2sa_ 13 GWELQRSLAPVGNLIALDVHSKE------------FCGDFSNPKGVAETVRKL-----RPDVIVNAAAHTAVDKAESEPE 75 (298)
T ss_dssp HHHHHHHTTTTSEEEEECTTCSS------------SCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHHHHTTCHH
T ss_pred HHHHHHHHHhCCCEEEEECCCcc------------ccCcCCCHHHHHHHHHHc-----CCCEEEEecccccccccccCcc
Confidence 35566677777777766543221 234556777777666543 5899999999765444455556
Q ss_pred hhhhcccccHHHHHHHHhhcccCCCceEEecCCccc
Q psy2266 155 TTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM 190 (313)
Q Consensus 155 ~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~ 190 (313)
..+.+|..+...+..+... .+.+++++||....
T Consensus 76 ~~~~~n~~~~~~l~~~~~~---~~~~~~~~ss~~~~ 108 (298)
T d1n2sa_ 76 LAQLLNATSVEAIAKAANE---TGAWVVHYSTDYVF 108 (298)
T ss_dssp HHHHHHTHHHHHHHHHHTT---TTCEEEEEEEGGGS
T ss_pred ccccccccccccchhhhhc---cccccccccccccc
Confidence 7889999999888777642 34567777776543
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.44 E-value=0.14 Score=44.15 Aligned_cols=128 Identities=9% Similarity=-0.042 Sum_probs=78.9
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccC-C--CceEEecCC
Q psy2266 111 FNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP-H--ARVVNVASK 187 (313)
Q Consensus 111 ~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~-~--g~iv~vss~ 187 (313)
.+|..+.+++...++.. ++|+++++|+........+.-...+.+|..|...+..++.-.... . .+++..||.
T Consensus 62 ~~Di~~~~~~~~~~~~~-----~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~ 136 (339)
T d1n7ha_ 62 YADLTDASSLRRWIDVI-----KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSS 136 (339)
T ss_dssp ECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG
T ss_pred EccccCHHHHHHHHhhh-----ccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccc
Confidence 45667777776665542 899999999875544444566778899999999988877654322 2 234444443
Q ss_pred ccccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeE
Q psy2266 188 LGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDII 267 (313)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~ 267 (313)
........ ..+| + ....+...|+.+|.+-..+++..++. +|+.
T Consensus 137 ~~~~~~~~-----------~~~E------------------~-~~~~p~~~Y~~sK~~~E~~~~~~~~~-------~~~~ 179 (339)
T d1n7ha_ 137 EMFGSTPP-----------PQSE------------------T-TPFHPRSPYAASKCAAHWYTVNYREA-------YGLF 179 (339)
T ss_dssp GGGTTSCS-----------SBCT------------------T-SCCCCCSHHHHHHHHHHHHHHHHHHH-------HCCE
T ss_pred eecccCCC-----------CCCC------------------C-CCCCCcchhhHHHHHHHHHHHHHHHH-------hCCC
Confidence 32111000 0000 0 11234556999999999888655543 2688
Q ss_pred EEeeccccccccc
Q psy2266 268 VNPVHPGYVNTDL 280 (313)
Q Consensus 268 vn~v~PG~v~T~~ 280 (313)
+..+-|+.|--|.
T Consensus 180 ~~ilR~~~vyGp~ 192 (339)
T d1n7ha_ 180 ACNGILFNHESPR 192 (339)
T ss_dssp EEEEEECCEECTT
T ss_pred EEEEEEccccCCC
Confidence 8888887665443
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=94.41 E-value=0.06 Score=46.29 Aligned_cols=77 Identities=14% Similarity=0.043 Sum_probs=54.5
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.++.++.+|+.|.+++.++++.. ++|++||+|+..... ...++....+++|+.|+..+++++... ...+.
T Consensus 49 ~~~~~i~~Di~~~~~l~~~~~~~-----~~d~Vih~aa~~~~~---~~~~~~~~~~~~Nv~gt~nll~~~~~~--~~~~~ 118 (338)
T d1orra_ 49 GNFEFVHGDIRNKNDVTRLITKY-----MPDSCFHLAGQVAMT---TSIDNPCMDFEINVGGTLNLLEAVRQY--NSNCN 118 (338)
T ss_dssp CCCEEEECCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHH--CTTCE
T ss_pred CCcEEEEcccCCHHHHHHHHHhc-----CCceEEeeccccccc---ccccChHHHHHHHHHHHHHHHHhhhcc--ccccc
Confidence 35778899999999888877644 589999999876431 111455788899999999999876653 22344
Q ss_pred EEEeccc
Q psy2266 89 VNVASKL 95 (313)
Q Consensus 89 V~isS~~ 95 (313)
|+.+|..
T Consensus 119 i~~sS~~ 125 (338)
T d1orra_ 119 IIYSSTN 125 (338)
T ss_dssp EEEEEEG
T ss_pred ccccccc
Confidence 4444443
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.39 E-value=0.041 Score=48.14 Aligned_cols=112 Identities=14% Similarity=-0.065 Sum_probs=73.4
Q ss_pred cCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhccccch
Q psy2266 131 NGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTE 210 (313)
Q Consensus 131 ~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~~~~~~ 210 (313)
....+.+++.+.........++....+++|+.|+..+.+.+.-. +-.++|++||..........+ .+|
T Consensus 89 ~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~--~~~~~i~~SS~~vyg~~~~~~----------~~E 156 (341)
T d1sb8a_ 89 CAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA--KVQSFTYAASSSTYGDHPGLP----------KVE 156 (341)
T ss_dssp HTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTCCCSS----------BCT
T ss_pred cccccccccccccccccccccCccchhheeehhHHHHHHHHHhc--CCceEEEcccceeeCCCCCCC----------ccC
Confidence 45567777777655444456777889999999999998877642 225899999987643211100 000
Q ss_pred HHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEEeeccccccccc
Q psy2266 211 DQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280 (313)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn~v~PG~v~T~~ 280 (313)
+....+...|+.||.+.+.+++.+++.. ++++..+-|+.|-.+.
T Consensus 157 -------------------~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~i~~~ilR~~~v~G~~ 200 (341)
T d1sb8a_ 157 -------------------DTIGKPLSPYAVTKYVNELYADVFSRCY-------GFSTIGLRYFNVFGRR 200 (341)
T ss_dssp -------------------TCCCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCCEEEEECCEECTT
T ss_pred -------------------CCCCCCCCcchHHHHHHHHHHHHHHHHh-------CCCeEEEEeceeeccC
Confidence 1123445669999999999997666543 5666777777665543
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=93.94 E-value=0.047 Score=48.58 Aligned_cols=121 Identities=14% Similarity=0.106 Sum_probs=76.6
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccC----
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP---- 84 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~---- 84 (313)
.++.++.+|++|..+++++++.. ++|++||+|+..... ...++-...+++|+.++..+.+++...-..
T Consensus 50 ~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~VihlAa~~~~~---~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~ 121 (361)
T d1kewa_ 50 NRYNFEHADICDSAEITRIFEQY-----QPDAVMHLAAESHVD---RSITGPAAFIETNIVGTYALLEVARKYWSALGED 121 (361)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHH---HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHH
T ss_pred CCcEEEEccCCCHHHHHHHHHhC-----CCCEEEECccccchh---hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence 35788899999999888777642 699999999864311 011334568899999999999988765432
Q ss_pred ---CceEEEEecccccccCCCch--hhh-------hhh---cc--cCCCHHHHHHHHHHHHHHcCCccEEE
Q psy2266 85 ---HARVVNVASKLGMLYNVPSQ--ELR-------QTL---FN--ESLTEDQLLDMMTDYVQYNGPLDKIL 138 (313)
Q Consensus 85 ---~g~IV~isS~~~~~~~~~~~--~~~-------~~~---~~--d~~~~~~~~~~~~~~~~~~G~lD~Li 138 (313)
..++|++||.+..-...... +.. +.. +. ...+.-..+.++..+.+++| +++.+
T Consensus 122 ~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~-i~~~~ 191 (361)
T d1kewa_ 122 KKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYG-LPTIV 191 (361)
T ss_dssp HHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-CCEEE
T ss_pred ccCceEEEEeccceeeCCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence 35899999977553222111 000 000 00 11234566777777777785 55533
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=93.87 E-value=0.14 Score=44.49 Aligned_cols=63 Identities=14% Similarity=0.041 Sum_probs=44.2
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHh
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFP 80 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~ 80 (313)
.+..+.+|++|.+.+.++++.. .+|+++|.|+..... ...+.....+++|+.++..+++++..
T Consensus 57 ~i~~~~~Dl~d~~~l~~~~~~~-----~~~~v~~~aa~~~~~---~~~~~~~~~~~~Nv~g~~n~l~~~~~ 119 (356)
T d1rkxa_ 57 GMQSEIGDIRDQNKLLESIREF-----QPEIVFHMAAQPLVR---LSYSEPVETYSTNVMGTVYLLEAIRH 119 (356)
T ss_dssp TSEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCeEEEeeccChHhhhhhhhhc-----hhhhhhhhhcccccc---ccccCCccccccccccchhhhhhhhc
Confidence 5788899999998887766542 589999999865421 11144566777788888777776554
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=91.23 E-value=0.18 Score=43.10 Aligned_cols=73 Identities=10% Similarity=0.018 Sum_probs=51.1
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccc
Q psy2266 111 FNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM 190 (313)
Q Consensus 111 ~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~ 190 (313)
.+|..+.+.+.+.++.. ++|+++++|+........++....+++|+.|+..+++++.- .+-.+.+++||....
T Consensus 55 ~~Di~~~~~l~~~~~~~-----~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~--~~~~~~i~~sS~~~~ 127 (338)
T d1orra_ 55 HGDIRNKNDVTRLITKY-----MPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQ--YNSNCNIIYSSTNKV 127 (338)
T ss_dssp ECCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEEEEGGG
T ss_pred EcccCCHHHHHHHHHhc-----CCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhc--ccccccccccccccc
Confidence 45667877776665543 58999999987655444456678999999999998876654 223556666665543
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=89.51 E-value=1.1 Score=36.88 Aligned_cols=72 Identities=14% Similarity=0.080 Sum_probs=47.6
Q ss_pred EeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEecc
Q psy2266 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASK 94 (313)
Q Consensus 15 ~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS~ 94 (313)
..|++|.+.++++++.. ++|++||+||+....... +.-...+++|..+...+.++... .+.+++++||.
T Consensus 37 ~~Dl~~~~~~~~~i~~~-----~~D~Vih~Aa~~~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~~ss~ 105 (298)
T d1n2sa_ 37 CGDFSNPKGVAETVRKL-----RPDVIVNAAAHTAVDKAE---SEPELAQLLNATSVEAIAKAANE---TGAWVVHYSTD 105 (298)
T ss_dssp CCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHHHHT---TCHHHHHHHHTHHHHHHHHHHTT---TTCEEEEEEEG
T ss_pred cCcCCCHHHHHHHHHHc-----CCCEEEEecccccccccc---cCccccccccccccccchhhhhc---ccccccccccc
Confidence 46888888887777643 589999999976432111 22245667888888887776532 35567777765
Q ss_pred ccc
Q psy2266 95 LGM 97 (313)
Q Consensus 95 ~~~ 97 (313)
...
T Consensus 106 ~~~ 108 (298)
T d1n2sa_ 106 YVF 108 (298)
T ss_dssp GGS
T ss_pred ccc
Confidence 543
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=88.98 E-value=0.7 Score=39.65 Aligned_cols=77 Identities=12% Similarity=0.116 Sum_probs=52.1
Q ss_pred CceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceE
Q psy2266 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARV 88 (313)
Q Consensus 9 ~~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~I 88 (313)
.++.++++|+++.+++.+.+ .+ .+|++||+|+..... ...+.-...+++|+.++..+++++... +-+.
T Consensus 45 ~~~~~i~~Di~~~~~~~~~~---~~---~~d~Vih~a~~~~~~---~~~~~~~~~~~~nv~gt~~ll~~~~~~---~~~~ 112 (342)
T d2blla1 45 PHFHFVEGDISIHSEWIEYH---VK---KCDVVLPLVAIATPI---EYTRNPLRVFELDFEENLRIIRYCVKY---RKRI 112 (342)
T ss_dssp TTEEEEECCTTTCSHHHHHH---HH---HCSEEEECBCCCCHH---HHHHSHHHHHHHHTHHHHHHHHHHHHT---TCEE
T ss_pred CCeEEEECccCChHHHHHHH---Hh---CCCcccccccccccc---ccccCCccccccccccccccccccccc---cccc
Confidence 45788999999877655432 22 489999999975532 111334567889999999999986442 3456
Q ss_pred EEEeccccc
Q psy2266 89 VNVASKLGM 97 (313)
Q Consensus 89 V~isS~~~~ 97 (313)
++++|....
T Consensus 113 ~~~ss~~~~ 121 (342)
T d2blla1 113 IFPSTSEVY 121 (342)
T ss_dssp EEECCGGGG
T ss_pred ccccccccc
Confidence 666665543
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.88 E-value=0.42 Score=39.26 Aligned_cols=97 Identities=16% Similarity=-0.004 Sum_probs=64.7
Q ss_pred HHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhcccCCCceEEecCCccccccccChhhhhhhhc
Q psy2266 126 DYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFN 205 (313)
Q Consensus 126 ~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~~~~~~~~~~~~~~~~~~ 205 (313)
.+.+.+.+.|++++++|... .........++|+.++..+++.+.. .+-.+++++||.....
T Consensus 73 ~~~~~~~~~d~vi~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~--~~v~~fi~~Ss~~~~~-------------- 133 (232)
T d2bkaa1 73 DYASAFQGHDVGFCCLGTTR---GKAGAEGFVRVDRDYVLKSAELAKA--GGCKHFNLLSSKGADK-------------- 133 (232)
T ss_dssp GGGGGGSSCSEEEECCCCCH---HHHHHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCTTCCT--------------
T ss_pred cccccccccccccccccccc---cccchhhhhhhcccccceeeecccc--cCccccccCCcccccc--------------
Confidence 45566778999999998542 2344556678899888888877643 2225789999887642
Q ss_pred cccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCe-EEEeeccccccccc
Q psy2266 206 ESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDI-IVNPVHPGYVNTDL 280 (313)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI-~vn~v~PG~v~T~~ 280 (313)
.+...|+.+|...+... +++ |. ++..+-||++-.+.
T Consensus 134 ----------------------------~~~~~Y~~~K~~~E~~l----~~~-------~~~~~~IlRP~~i~G~~ 170 (232)
T d2bkaa1 134 ----------------------------SSNFLYLQVKGEVEAKV----EEL-------KFDRYSVFRPGVLLCDR 170 (232)
T ss_dssp ----------------------------TCSSHHHHHHHHHHHHH----HTT-------CCSEEEEEECCEEECTT
T ss_pred ----------------------------CccchhHHHHHHhhhcc----ccc-------cccceEEecCceeecCC
Confidence 23345999998776655 333 22 35567899886553
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=87.88 E-value=0.35 Score=42.40 Aligned_cols=129 Identities=11% Similarity=0.040 Sum_probs=86.7
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhhhhhhhcccccHHHHHHHHhhc-ccCCCceEEecCCcc
Q psy2266 111 FNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRAETTLATNFFALVTVCHILFPL-LRPHARVVNVASKLG 189 (313)
Q Consensus 111 ~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~p~-l~~~g~iv~vss~~~ 189 (313)
.+|..|.++++..++. -.+|+++++|+....+...++.+..+++|+.|+..+..++.-. +++..++|++||...
T Consensus 61 ~~Dl~d~~~~~~~~~~-----~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~v 135 (357)
T d1db3a_ 61 YGDLSDTSNLTRILRE-----VQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSEL 135 (357)
T ss_dssp CCCSSCHHHHHHHHHH-----HCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG
T ss_pred EeecCCHHHHHHHHhc-----cCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhh
Confidence 4566788888877664 3579999999987666555666778999999999998887653 334467999998654
Q ss_pred ccccccChhhhhhhhccccchHHHHHHHHHHHHHhhhcccccCCCCCCchhhhHHHHHHHHHHHHhhhccCCCCCCeEEE
Q psy2266 190 MLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVN 269 (313)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~~~~~l~~~~~~~gI~vn 269 (313)
.- .+... .++|+ . ...+...|+.||.+.+.+++.+++.. |+.+.
T Consensus 136 YG-~~~~~---------~~~E~-----------------~--~~~P~~~Y~~sK~~~E~~~~~~~~~~-------~l~~~ 179 (357)
T d1db3a_ 136 YG-LVQEI---------PQKET-----------------T--PFYPRSPYAVAKLYAYWITVNYRESY-------GMYAC 179 (357)
T ss_dssp GT-TCCSS---------SBCTT-----------------S--CCCCCSHHHHHHHHHHHHHHHHHHHH-------CCCEE
T ss_pred hC-CCCCC---------CcCCC-----------------C--CCCCCChHHHHHHHHHHHHHHHHHHh-------CCCEE
Confidence 21 11100 00110 0 12344569999999999996666543 57777
Q ss_pred eeccccccccc
Q psy2266 270 PVHPGYVNTDL 280 (313)
Q Consensus 270 ~v~PG~v~T~~ 280 (313)
.+-|+.|-.|.
T Consensus 180 ilR~~~vyGp~ 190 (357)
T d1db3a_ 180 NGILFNHESPR 190 (357)
T ss_dssp EEEECCEECTT
T ss_pred EEEeccccCCC
Confidence 77777665553
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=85.40 E-value=1.1 Score=36.37 Aligned_cols=94 Identities=11% Similarity=-0.069 Sum_probs=61.6
Q ss_pred HHHHhcc-cCCceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCC----C--
Q psy2266 76 HILFPLL-RPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPG----S-- 148 (313)
Q Consensus 76 ra~~~~m-~~~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~----~-- 148 (313)
++++..+ ++|.+|+.++........ ....+|..+............+..+. +.++.+++..... +
T Consensus 15 ~aiA~~la~~Ga~V~i~~~~~~~~~~-------~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 86 (241)
T d1uaya_ 15 RAAALALKARGYRVVVLDLRREGEDL-------IYVEGDVTREEDVRRAVARAQEEAPL-FAVVSAAGVGLAEKILGKEG 86 (241)
T ss_dssp HHHHHHHHHHTCEEEEEESSCCSSSS-------EEEECCTTCHHHHHHHHHHHHHHSCE-EEEEECCCCCCCCCSBCSSS
T ss_pred HHHHHHHHHCCCEEEEEECCcccccc-------eEeeccccchhhhHHHHHhhhccccc-cchhhhhhcccccccccccc
Confidence 4444444 457788877764322111 12345667888888888877766654 4455555443222 1
Q ss_pred --cchhhhhhhhcccccHHHHHHHHhhcccC
Q psy2266 149 --FGQRAETTLATNFFALVTVCHILFPLLRP 177 (313)
Q Consensus 149 --~~~~~~~~~~~N~~g~~~~~~~~~p~l~~ 177 (313)
..+.|+.++++|+.+.+.+++.++|.+..
T Consensus 87 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 117 (241)
T d1uaya_ 87 PHGLESFRRVLEVNLLGTFNVLRLAAWAMRE 117 (241)
T ss_dssp BCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred chhHHHHHHHHHHHhhhhHHHHHHHHHHhhh
Confidence 13688999999999999999999998865
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=84.32 E-value=3.5 Score=33.49 Aligned_cols=90 Identities=9% Similarity=0.110 Sum_probs=53.8
Q ss_pred HHHHHhcccC-CceEEEEecccccccCCCchhhhhhhcccCCCHHHHHHHHHHHHHHcCCccEEEeccCcCCCCCcchhh
Q psy2266 75 CHILFPLLRP-HARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSFGQRA 153 (313)
Q Consensus 75 ~ra~~~~m~~-~g~IV~isS~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~lD~Linna~~~~~~~~~~~~ 153 (313)
-+.+++.+++ |..|+.+++.. .|..+.++++++++.. ..|+++++|+...........
T Consensus 14 G~~l~~~L~~~g~~Vi~~~r~~----------------~D~~d~~~~~~~l~~~-----~~d~vih~a~~~~~~~~~~~~ 72 (281)
T d1vl0a_ 14 GREIQKQLKGKNVEVIPTDVQD----------------LDITNVLAVNKFFNEK-----KPNVVINCAAHTAVDKCEEQY 72 (281)
T ss_dssp HHHHHHHHTTSSEEEEEECTTT----------------CCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHHHHHHCH
T ss_pred HHHHHHHHHhCCCEEEEeechh----------------ccCCCHHHHHHHHHHc-----CCCEEEeeccccccccccccc
Confidence 3455555644 56777665422 2456777766665533 679999998876544444455
Q ss_pred hhhhhcccccHHHHHHHHhhcccCCCceEEecCCc
Q psy2266 154 ETTLATNFFALVTVCHILFPLLRPHARVVNVASKL 188 (313)
Q Consensus 154 ~~~~~~N~~g~~~~~~~~~p~l~~~g~iv~vss~~ 188 (313)
+..+.+|......+....... ...++..||..
T Consensus 73 ~~~~~~n~~~~~~~~~~~~~~---~~~~~~~ss~~ 104 (281)
T d1vl0a_ 73 DLAYKINAIGPKNLAAAAYSV---GAEIVQISTDY 104 (281)
T ss_dssp HHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGG
T ss_pred hhhcccccccccccccccccc---cccccccccce
Confidence 667777777776665554432 23455555543
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=84.21 E-value=3.5 Score=34.63 Aligned_cols=78 Identities=15% Similarity=0.037 Sum_probs=52.7
Q ss_pred ceeEEEeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccC---Cc
Q psy2266 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRP---HA 86 (313)
Q Consensus 10 ~~~~~~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~---~g 86 (313)
.+.++.+|+.+.+++.+.++.. ++|++||.|+..... ...+.-...++.|..+...+..++...... ..
T Consensus 57 ~~~~~~~Di~~~~~~~~~~~~~-----~~D~Vih~Aa~~~~~---~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 128 (339)
T d1n7ha_ 57 LMKLHYADLTDASSLRRWIDVI-----KPDEVYNLAAQSHVA---VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTV 128 (339)
T ss_dssp CEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHH---HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCC
T ss_pred ceEEEEccccCHHHHHHHHhhh-----ccchhhhcccccccc---ccccCccccccccccccchhhhhhhhcccccccce
Confidence 4567889999998887776642 799999999875522 111444567788988888888877654422 34
Q ss_pred eEEEEeccc
Q psy2266 87 RVVNVASKL 95 (313)
Q Consensus 87 ~IV~isS~~ 95 (313)
+++..||..
T Consensus 129 ~~~~~ss~~ 137 (339)
T d1n7ha_ 129 KYYQAGSSE 137 (339)
T ss_dssp EEEEEEEGG
T ss_pred eeeecccce
Confidence 555555544
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=81.52 E-value=2.1 Score=35.80 Aligned_cols=116 Identities=13% Similarity=0.084 Sum_probs=68.7
Q ss_pred EeecCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCCChhHHHHHHHhHHHHHHHHHHHHHHhcccCCceEEEEecc
Q psy2266 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASK 94 (313)
Q Consensus 15 ~~Dvs~~~~v~~~~~~v~~~~g~iDilVnNAGi~~~~~~~~~~~~~~~~~~vNl~~~i~l~ra~~~~m~~~g~IV~isS~ 94 (313)
.+|+.+.+.++++++. ..+|.++|+|+...... .........+++|+.++..+++++... .-.++|++||.
T Consensus 37 ~~~~~~~~~~~~~~~~-----~~~d~v~~~a~~~~~~~--~~~~~~~~~~~~Nv~gt~~ll~~a~~~--~v~~~i~~SS~ 107 (315)
T d1e6ua_ 37 ELNLLDSRAVHDFFAS-----ERIDQVYLAAAKVGGIV--ANNTYPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSS 107 (315)
T ss_dssp TCCTTCHHHHHHHHHH-----HCCSEEEECCCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCG
T ss_pred hccccCHHHHHHHHhh-----cCCCEEEEcchhccccc--cchhhHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECCc
Confidence 4678888877776652 26899999997754221 111444556788999999998887553 22479999998
Q ss_pred cccccCCCc--hhhh--h-h--hc--ccCCCHHHHHHHHHHHHHHcCCccEEEec
Q psy2266 95 LGMLYNVPS--QELR--Q-T--LF--NESLTEDQLLDMMTDYVQYNGPLDKILDT 140 (313)
Q Consensus 95 ~~~~~~~~~--~~~~--~-~--~~--~d~~~~~~~~~~~~~~~~~~G~lD~Linn 140 (313)
...-...+. ++-. . . .+ ....++-..+.++..+.+.+| +++.+..
T Consensus 108 ~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g-l~~~ilR 161 (315)
T d1e6ua_ 108 CIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYG-RDYRSVM 161 (315)
T ss_dssp GGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHC-CEEEEEE
T ss_pred eEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCEEEEe
Confidence 865332211 1110 0 0 01 122234455666777776665 5664444
|